HEADER ISOMERASE 11-SEP-25 9SNY TITLE GLUCOSE/ XYLOSE ISOMERASE UNDER 150 MPA WITH XYLOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: XYLOSE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.3.1.5 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES PSEUDOGRISEOLUS; SOURCE 3 ORGANISM_TAXID: 36817 KEYWDS HIGH PRESSURE, HIGH-PRESSURE, ISOMERASE, XYLOSE EXPDTA X-RAY DIFFRACTION AUTHOR A.KLONECKA,J.SLAWEK,K.KURPIEWSKA,M.TAUBE,M.JANICKI,M.KOZAK REVDAT 1 30-SEP-26 9SNY 0 JRNL AUTH A.KLONECKA,J.SLAWEK,K.KURPIEWSKA,M.TAUBE,M.JANICKI,M.KOZAK JRNL TITL GLUCOSE/ XYLOSE ISOMERASE UNDER 150 MPA WITH XYLOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.320 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 96763 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.139 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 4662 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0600 - 4.2400 1.00 3289 175 0.1194 0.1201 REMARK 3 2 4.2400 - 3.3700 1.00 3159 187 0.0925 0.1217 REMARK 3 3 3.3700 - 2.9400 1.00 3172 159 0.1131 0.1668 REMARK 3 4 2.9400 - 2.6700 1.00 3157 154 0.1238 0.1525 REMARK 3 5 2.6700 - 2.4800 1.00 3111 164 0.1187 0.1782 REMARK 3 6 2.4800 - 2.3300 1.00 3105 184 0.1164 0.1544 REMARK 3 7 2.3300 - 2.2200 1.00 3071 201 0.1114 0.1692 REMARK 3 8 2.2200 - 2.1200 1.00 3093 181 0.1090 0.1666 REMARK 3 9 2.1200 - 2.0400 1.00 3104 169 0.1168 0.1874 REMARK 3 10 2.0400 - 1.9700 1.00 3072 166 0.1246 0.1721 REMARK 3 11 1.9700 - 1.9100 1.00 3138 161 0.1242 0.1884 REMARK 3 12 1.9100 - 1.8500 1.00 3107 149 0.1324 0.1679 REMARK 3 13 1.8500 - 1.8000 1.00 3110 135 0.1412 0.2031 REMARK 3 14 1.8000 - 1.7600 1.00 3104 144 0.1408 0.1872 REMARK 3 15 1.7600 - 1.7200 1.00 3133 124 0.1450 0.2131 REMARK 3 16 1.7200 - 1.6800 1.00 3115 140 0.1429 0.2154 REMARK 3 17 1.6800 - 1.6500 1.00 3094 144 0.1536 0.2207 REMARK 3 18 1.6500 - 1.6200 1.00 3091 166 0.1547 0.2313 REMARK 3 19 1.6200 - 1.5900 1.00 3104 142 0.1594 0.2346 REMARK 3 20 1.5900 - 1.5600 1.00 3086 143 0.1735 0.2384 REMARK 3 21 1.5600 - 1.5400 1.00 3083 159 0.1884 0.2507 REMARK 3 22 1.5400 - 1.5100 1.00 3086 160 0.2119 0.2568 REMARK 3 23 1.5100 - 1.4900 0.95 2888 144 0.4074 0.4552 REMARK 3 24 1.4900 - 1.4700 0.95 2247 108 0.5135 0.5218 REMARK 3 25 1.4700 - 1.4500 1.00 3049 154 0.2555 0.2802 REMARK 3 26 1.4500 - 1.4300 1.00 3060 153 0.2609 0.3286 REMARK 3 27 1.4300 - 1.4100 1.00 3095 151 0.2458 0.2961 REMARK 3 28 1.4100 - 1.4000 1.00 3090 142 0.2471 0.2984 REMARK 3 29 1.4000 - 1.3800 1.00 3068 180 0.2512 0.3043 REMARK 3 30 1.3800 - 1.3600 0.98 3020 123 0.2518 0.3248 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.153 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.672 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 3389 REMARK 3 ANGLE : 1.243 4625 REMARK 3 CHIRALITY : 0.097 470 REMARK 3 PLANARITY : 0.016 644 REMARK 3 DIHEDRAL : 15.130 1304 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9SNY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1292150793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91895 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104433 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.360 REMARK 200 RESOLUTION RANGE LOW (A) : 46.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 4K, 0.15 MM AMMONIUM SULPHATE, REMARK 280 AND 20 MM TRIS AT PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.05850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.87900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.22700 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.05850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.87900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.22700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 46.05850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.87900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.22700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 46.05850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.87900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.22700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 516 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 720 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 967 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 985 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 388 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 17 -76.47 -86.01 REMARK 500 PHE A 94 -29.11 -142.10 REMARK 500 GLU A 186 106.01 78.30 REMARK 500 GLU A 186 105.80 79.04 REMARK 500 ASN A 250 75.98 -100.52 REMARK 500 ALA A 343 58.24 -152.63 REMARK 500 PHE A 357 -75.75 -156.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1171 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A1172 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A1173 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A1174 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A1175 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A1176 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A1177 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH A1178 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A1179 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A1180 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH A1181 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH A1182 DISTANCE = 7.04 ANGSTROMS REMARK 525 HOH A1183 DISTANCE = 17.07 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 406 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 35 OD1 REMARK 620 2 ARG A 74 NE 121.9 REMARK 620 3 HOH A 767 O 106.5 120.2 REMARK 620 4 HOH A 831 O 124.2 80.4 100.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 404 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 181 OE2 REMARK 620 2 GLU A 217 OE1 96.1 REMARK 620 3 GLU A 217 OE1 102.3 25.8 REMARK 620 4 ASP A 245 OD2 93.4 107.2 81.8 REMARK 620 5 ASP A 287 OD2 164.0 90.1 89.6 98.8 REMARK 620 6 XLS A 401 O2 84.8 83.8 109.2 169.0 81.2 REMARK 620 7 XLS A 401 O4 85.3 163.8 168.1 88.8 84.7 80.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 217 OE2 REMARK 620 2 HIS A 220 NE2 77.4 REMARK 620 3 ASP A 255 OD1 110.4 102.4 REMARK 620 4 ASP A 255 OD2 166.0 97.2 57.7 REMARK 620 5 ASP A 257 OD1 89.0 166.0 85.5 96.8 REMARK 620 6 HOH A 501 O 55.7 83.3 55.3 111.2 92.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 217 OE2 REMARK 620 2 ASP A 257 OD2 113.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 220 NE2 REMARK 620 2 XLS A 401 O1 97.2 REMARK 620 3 XLS A 401 O2 104.8 72.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 407 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 585 O REMARK 620 2 HOH A 730 O 98.4 REMARK 620 3 HOH A1050 O 136.3 124.3 REMARK 620 N 1 2 DBREF 9SNY A 1 388 UNP P24300 XYLA_STRRU 1 388 SEQRES 1 A 388 MET ASN TYR GLN PRO THR PRO GLU ASP ARG PHE THR PHE SEQRES 2 A 388 GLY LEU TRP THR VAL GLY TRP GLN GLY ARG ASP PRO PHE SEQRES 3 A 388 GLY ASP ALA THR ARG ARG ALA LEU ASP PRO VAL GLU SER SEQRES 4 A 388 VAL ARG ARG LEU ALA GLU LEU GLY ALA HIS GLY VAL THR SEQRES 5 A 388 PHE HIS ASP ASP ASP LEU ILE PRO PHE GLY SER SER ASP SEQRES 6 A 388 SER GLU ARG GLU GLU HIS VAL LYS ARG PHE ARG GLN ALA SEQRES 7 A 388 LEU ASP ASP THR GLY MET LYS VAL PRO MET ALA THR THR SEQRES 8 A 388 ASN LEU PHE THR HIS PRO VAL PHE LYS ASP GLY GLY PHE SEQRES 9 A 388 THR ALA ASN ASP ARG ASP VAL ARG ARG TYR ALA LEU ARG SEQRES 10 A 388 LYS THR ILE ARG ASN ILE ASP LEU ALA VAL GLU LEU GLY SEQRES 11 A 388 ALA GLU THR TYR VAL ALA TRP GLY GLY ARG GLU GLY ALA SEQRES 12 A 388 GLU SER GLY GLY ALA LYS ASP VAL ARG ASP ALA LEU ASP SEQRES 13 A 388 ARG MET LYS GLU ALA PHE ASP LEU LEU GLY GLU TYR VAL SEQRES 14 A 388 THR SER GLN GLY TYR ASP ILE ARG PHE ALA ILE GLU PRO SEQRES 15 A 388 LYS PRO ASN GLU PRO ARG GLY ASP ILE LEU LEU PRO THR SEQRES 16 A 388 VAL GLY HIS ALA LEU ALA PHE ILE GLU ARG LEU GLU ARG SEQRES 17 A 388 PRO GLU LEU TYR GLY VAL ASN PRO GLU VAL GLY HIS GLU SEQRES 18 A 388 GLN MET ALA GLY LEU ASN PHE PRO HIS GLY ILE ALA GLN SEQRES 19 A 388 ALA LEU TRP ALA GLY LYS LEU PHE HIS ILE ASP LEU ASN SEQRES 20 A 388 GLY GLN ASN GLY ILE LYS TYR ASP GLN ASP LEU ARG PHE SEQRES 21 A 388 GLY ALA GLY ASP LEU ARG ALA ALA PHE TRP LEU VAL ASP SEQRES 22 A 388 LEU LEU GLU SER ALA GLY TYR SER GLY PRO ARG HIS PHE SEQRES 23 A 388 ASP PHE LYS PRO PRO ARG THR GLU ASP PHE ASP GLY VAL SEQRES 24 A 388 TRP ALA SER ALA ALA GLY CYS MET ARG ASN TYR LEU ILE SEQRES 25 A 388 LEU LYS GLU ARG ALA ALA ALA PHE ARG ALA ASP PRO GLU SEQRES 26 A 388 VAL GLN GLU ALA LEU ARG ALA SER ARG LEU ASP GLU LEU SEQRES 27 A 388 ALA ARG PRO THR ALA ALA ASP GLY LEU GLN ALA LEU LEU SEQRES 28 A 388 ASP ASP ARG SER ALA PHE GLU GLU PHE ASP VAL ASP ALA SEQRES 29 A 388 ALA ALA ALA ARG GLY MET ALA PHE GLU ARG LEU ASP GLN SEQRES 30 A 388 LEU ALA MET ASP HIS LEU LEU GLY ALA ARG GLY HET XLS A 401 10 HET GOL A 402 6 HET MN A 403 3 HET MN A 404 1 HET MG A 405 1 HET MG A 406 1 HET MG A 407 1 HETNAM XLS D-XYLOSE HETNAM GOL GLYCEROL HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION HETSYN XLS D-XYLOSE (LINEAR FORM) HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 XLS C5 H10 O5 FORMUL 3 GOL C3 H8 O3 FORMUL 4 MN 2(MN 2+) FORMUL 6 MG 3(MG 2+) FORMUL 9 HOH *683(H2 O) HELIX 1 AA1 THR A 6 ASP A 9 5 4 HELIX 2 AA2 LEU A 15 GLY A 19 1 5 HELIX 3 AA3 ASP A 35 GLY A 47 1 13 HELIX 4 AA4 ASP A 55 ILE A 59 1 5 HELIX 5 AA5 SER A 64 GLY A 83 1 20 HELIX 6 AA6 HIS A 96 LYS A 100 5 5 HELIX 7 AA7 ASP A 108 LEU A 129 1 22 HELIX 8 AA8 SER A 145 LYS A 149 5 5 HELIX 9 AA9 ASP A 150 GLN A 172 1 23 HELIX 10 AB1 THR A 195 GLU A 204 1 10 HELIX 11 AB2 ARG A 208 GLU A 210 5 3 HELIX 12 AB3 GLU A 217 MET A 223 1 7 HELIX 13 AB4 ASN A 227 ALA A 238 1 12 HELIX 14 AB5 ASP A 264 GLY A 279 1 16 HELIX 15 AB6 ASP A 295 ASP A 323 1 29 HELIX 16 AB7 ASP A 323 SER A 333 1 11 HELIX 17 AB8 ARG A 334 ALA A 339 1 6 HELIX 18 AB9 GLY A 346 ASP A 352 1 7 HELIX 19 AC1 ASP A 353 PHE A 357 5 5 HELIX 20 AC2 ASP A 361 ARG A 368 1 8 HELIX 21 AC3 ALA A 371 GLY A 385 1 15 SHEET 1 AA1 8 TYR A 212 VAL A 214 0 SHEET 2 AA1 8 ARG A 177 ILE A 180 1 N ILE A 180 O GLY A 213 SHEET 3 AA1 8 THR A 133 ALA A 136 1 N TYR A 134 O ARG A 177 SHEET 4 AA1 8 MET A 88 THR A 90 1 N ALA A 89 O VAL A 135 SHEET 5 AA1 8 GLY A 50 HIS A 54 1 N PHE A 53 O THR A 90 SHEET 6 AA1 8 PHE A 11 GLY A 14 1 N PHE A 13 O THR A 52 SHEET 7 AA1 8 ARG A 284 PHE A 286 1 O PHE A 286 N THR A 12 SHEET 8 AA1 8 ASP A 245 LEU A 246 1 N LEU A 246 O HIS A 285 SHEET 1 AA2 2 GLY A 142 ALA A 143 0 SHEET 2 AA2 2 ASP A 190 ILE A 191 -1 O ASP A 190 N ALA A 143 LINK OD1 ASP A 35 MG MG A 406 1555 1555 2.72 LINK NE ARG A 74 MG MG A 406 1555 1555 2.64 LINK OE2 GLU A 181 MN MN A 404 1555 1555 2.09 LINK OE2AGLU A 217 MN A MN A 403 1555 1555 2.10 LINK OE2BGLU A 217 MN B MN A 403 1555 1555 2.71 LINK OE1AGLU A 217 MN MN A 404 1555 1555 2.09 LINK OE1BGLU A 217 MN MN A 404 1555 1555 1.87 LINK NE2 HIS A 220 MN A MN A 403 1555 1555 2.58 LINK NE2 HIS A 220 MN C MN A 403 1555 1555 1.96 LINK OD2 ASP A 245 MN MN A 404 1555 1555 2.19 LINK OD1AASP A 255 MN A MN A 403 1555 1555 2.38 LINK OD2AASP A 255 MN A MN A 403 1555 1555 2.05 LINK OD1AASP A 257 MN A MN A 403 1555 1555 2.44 LINK OD2BASP A 257 MN B MN A 403 1555 1555 2.49 LINK OD2 ASP A 287 MN MN A 404 1555 1555 2.11 LINK O1 XLS A 401 MN C MN A 403 1555 1555 2.32 LINK O2 XLS A 401 MN C MN A 403 1555 1555 2.46 LINK O2 XLS A 401 MN MN A 404 1555 1555 2.17 LINK O4 XLS A 401 MN MN A 404 1555 1555 2.29 LINK MN A MN A 403 O HOH A 501 1555 1555 2.77 LINK MG MG A 405 O HOH A 853 1555 1555 2.92 LINK MG MG A 406 O HOH A 767 1555 1555 2.84 LINK MG MG A 406 O HOH A 831 1555 1555 2.88 LINK MG MG A 407 O HOH A 585 1555 1555 2.95 LINK MG MG A 407 O HOH A 730 1555 2555 2.83 LINK MG MG A 407 O HOH A1050 1555 2555 2.94 CISPEP 1 GLU A 186 PRO A 187 0 15.15 CISPEP 2 GLU A 186 PRO A 187 0 15.58 CRYST1 92.117 97.758 102.454 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010856 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010229 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009760 0.00000 CONECT 309 3295 CONECT 637 3295 CONECT 1550 3293 CONECT 1870 3293 CONECT 1871 3293 CONECT 1872 3290 CONECT 1873 3291 CONECT 1894 3290 3292 CONECT 2089 3293 CONECT 2175 3290 CONECT 2177 3290 CONECT 2200 3290 CONECT 2203 3291 CONECT 2471 3293 CONECT 3274 3275 3279 CONECT 3275 3274 3276 3280 CONECT 3276 3275 3277 3281 CONECT 3277 3276 3278 3282 CONECT 3278 3277 3283 CONECT 3279 3274 3292 CONECT 3280 3275 3292 3293 CONECT 3281 3276 CONECT 3282 3277 3293 CONECT 3283 3278 CONECT 3284 3285 3286 CONECT 3285 3284 CONECT 3286 3284 3287 3288 CONECT 3287 3286 CONECT 3288 3286 3289 CONECT 3289 3288 CONECT 3290 1872 1894 2175 2177 CONECT 3290 2200 3297 CONECT 3291 1873 2203 CONECT 3292 1894 3279 3280 CONECT 3293 1550 1870 1871 2089 CONECT 3293 2471 3280 3282 CONECT 3294 3654 CONECT 3295 309 637 3566 3631 CONECT 3296 3381 CONECT 3297 3290 CONECT 3381 3296 CONECT 3566 3295 CONECT 3631 3295 CONECT 3654 3294 MASTER 370 0 7 21 10 0 0 6 3745 1 44 30 END