HEADER ISOMERASE 12-SEP-25 9SO8 TITLE GLUCOSE/ XYLOSE ISOMERASE UNDER 100 MPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: XYLOSE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.3.1.5 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES PSEUDOGRISEOLUS; SOURCE 3 ORGANISM_TAXID: 36817 KEYWDS HIGH PRESSURE, HIGH-PRESSURE, ISOMERASE, XYLOSE EXPDTA X-RAY DIFFRACTION AUTHOR A.KLONECKA,J.SLAWEK,K.KURPIEWSKA,M.TAUBE,M.JANICKI,M.KOZAK REVDAT 1 30-SEP-26 9SO8 0 JRNL AUTH A.KLONECKA,J.SLAWEK,K.KURPIEWSKA,M.TAUBE,M.JANICKI,M.KOZAK JRNL TITL GLUCOSE/ XYLOSE ISOMERASE UNDER 100 MPA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 185962 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.113 REMARK 3 R VALUE (WORKING SET) : 0.112 REMARK 3 FREE R VALUE : 0.133 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 9121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 3.3900 0.97 6285 269 0.1188 0.1424 REMARK 3 2 3.3900 - 2.6900 0.97 6087 262 0.0929 0.1052 REMARK 3 3 2.6900 - 2.3500 0.99 6123 294 0.0866 0.1156 REMARK 3 4 2.3500 - 2.1300 0.99 6068 345 0.0813 0.1002 REMARK 3 5 2.1300 - 1.9800 1.00 6058 365 0.0831 0.0992 REMARK 3 6 1.9800 - 1.8600 1.00 6055 370 0.0845 0.1046 REMARK 3 7 1.8600 - 1.7700 1.00 6076 334 0.0870 0.0996 REMARK 3 8 1.7700 - 1.6900 1.00 6069 333 0.0855 0.1126 REMARK 3 9 1.6900 - 1.6300 1.00 6098 300 0.0846 0.1138 REMARK 3 10 1.6300 - 1.5700 0.98 5950 306 0.0859 0.1100 REMARK 3 11 1.5700 - 1.5200 0.99 6064 281 0.0907 0.1191 REMARK 3 12 1.5200 - 1.4800 0.99 6023 301 0.0954 0.1117 REMARK 3 13 1.4800 - 1.4400 1.00 6103 256 0.1080 0.1390 REMARK 3 14 1.4400 - 1.4100 1.00 6104 285 0.1150 0.1357 REMARK 3 15 1.4100 - 1.3700 1.00 6101 276 0.1233 0.1405 REMARK 3 16 1.3700 - 1.3400 1.00 5974 330 0.1234 0.1374 REMARK 3 17 1.3400 - 1.3200 1.00 6114 282 0.1256 0.1529 REMARK 3 18 1.3200 - 1.2900 1.00 6032 335 0.1300 0.1506 REMARK 3 19 1.2900 - 1.2700 1.00 6037 306 0.1411 0.1771 REMARK 3 20 1.2700 - 1.2500 1.00 6004 323 0.1494 0.1768 REMARK 3 21 1.2500 - 1.2300 0.99 6027 298 0.1544 0.1820 REMARK 3 22 1.2300 - 1.2100 0.99 6045 283 0.1636 0.1767 REMARK 3 23 1.2100 - 1.1900 0.99 6003 312 0.1811 0.1969 REMARK 3 24 1.1900 - 1.1700 0.97 5884 320 0.1907 0.1938 REMARK 3 25 1.1700 - 1.1600 0.94 5661 317 0.1871 0.2105 REMARK 3 26 1.1600 - 1.1400 0.91 5492 289 0.1988 0.2161 REMARK 3 27 1.1400 - 1.1300 0.89 5363 274 0.2115 0.2135 REMARK 3 28 1.1300 - 1.1200 0.86 5217 284 0.2293 0.2490 REMARK 3 29 1.1200 - 1.1000 0.83 4933 314 0.2479 0.2479 REMARK 3 30 1.1000 - 1.0900 0.79 4791 277 0.2708 0.3037 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.084 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.428 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 3635 REMARK 3 ANGLE : 1.418 4974 REMARK 3 CHIRALITY : 0.095 492 REMARK 3 PLANARITY : 0.019 702 REMARK 3 DIHEDRAL : 13.988 1389 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9SO8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1292150844. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8731 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 232181 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.060 REMARK 200 RESOLUTION RANGE LOW (A) : 46.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05790 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 4K, 0.15 MM AMMONIUM SULPHATE, REMARK 280 AND 20 MM TRIS AT PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.13150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.10550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.14950 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.13150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.10550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.14950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 46.13150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.10550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.14950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 46.13150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.10550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.14950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 633 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1017 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1030 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 7 -34.83 -38.26 REMARK 500 THR A 17 -77.40 -85.06 REMARK 500 GLU A 186 97.93 82.15 REMARK 500 GLU A 186 99.96 83.25 REMARK 500 ASN A 215 78.98 -119.99 REMARK 500 ASN A 247 -169.73 -167.25 REMARK 500 ASN A 250 70.89 -100.57 REMARK 500 ASN A 250 73.79 -102.63 REMARK 500 TYR A 254 157.58 -48.17 REMARK 500 ALA A 343 60.29 -151.32 REMARK 500 PHE A 357 -75.32 -156.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1170 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A1171 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A1172 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A1173 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A1174 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A1175 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A1176 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A1177 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A1178 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A1179 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH A1180 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A1181 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH A1182 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH A1183 DISTANCE = 6.82 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 410 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 23 NE REMARK 620 2 ALA A 29 N 102.5 REMARK 620 3 HOH A 892 O 82.8 118.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 405 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 181 OE2 REMARK 620 2 GLU A 181 OE2 31.7 REMARK 620 3 GLU A 217 OE1 93.0 98.0 REMARK 620 4 GLU A 217 OE1 101.6 91.4 28.2 REMARK 620 5 ASP A 245 OD2 95.9 64.9 111.9 84.2 REMARK 620 6 ASP A 287 OD2 156.8 171.5 84.1 86.6 106.6 REMARK 620 7 GOL A 401 O2 88.1 92.9 161.0 167.4 86.8 87.5 REMARK 620 8 GOL A 401 O3 82.2 112.7 95.7 123.2 152.4 75.2 65.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 406 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 217 OE2 REMARK 620 2 HIS A 220 NE2 76.9 REMARK 620 3 ASP A 257 OD1 92.5 168.8 REMARK 620 4 HOH A 507 O 53.4 91.1 79.5 REMARK 620 5 HOH A 668 O 104.1 104.4 81.5 149.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 406 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 220 NE2 REMARK 620 2 ASP A 255 OD1 105.9 REMARK 620 3 ASP A 255 OD2 115.0 68.5 REMARK 620 4 ASP A 257 OD1 142.2 81.0 102.2 REMARK 620 5 HOH A 507 O 83.1 53.3 121.8 71.4 REMARK 620 6 HOH A 668 O 97.9 155.2 107.9 75.8 124.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 407 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 243 NE2 REMARK 620 2 HIS A 243 NE2 11.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 409 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 328 O REMARK 620 2 GLU A 328 OE1 84.6 REMARK 620 3 GLU A 328 OE2 102.3 47.9 REMARK 620 4 HOH A 567 O 112.4 55.7 89.2 REMARK 620 5 HOH A1020 O 127.1 139.5 128.0 86.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 408 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 641 O REMARK 620 2 HOH A 976 O 117.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 408 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 976 O REMARK 620 2 HOH A1013 O 106.4 REMARK 620 N 1 DBREF 9SO8 A 2 387 UNP P24300 XYLA_STRRU 2 387 SEQRES 1 A 386 ASN TYR GLN PRO THR PRO GLU ASP ARG PHE THR PHE GLY SEQRES 2 A 386 LEU TRP THR VAL GLY TRP GLN GLY ARG ASP PRO PHE GLY SEQRES 3 A 386 ASP ALA THR ARG ARG ALA LEU ASP PRO VAL GLU SER VAL SEQRES 4 A 386 ARG ARG LEU ALA GLU LEU GLY ALA HIS GLY VAL THR PHE SEQRES 5 A 386 HIS ASP ASP ASP LEU ILE PRO PHE GLY SER SER ASP SER SEQRES 6 A 386 GLU ARG GLU GLU HIS VAL LYS ARG PHE ARG GLN ALA LEU SEQRES 7 A 386 ASP ASP THR GLY MET LYS VAL PRO MET ALA THR THR ASN SEQRES 8 A 386 LEU PHE THR HIS PRO VAL PHE LYS ASP GLY GLY PHE THR SEQRES 9 A 386 ALA ASN ASP ARG ASP VAL ARG ARG TYR ALA LEU ARG LYS SEQRES 10 A 386 THR ILE ARG ASN ILE ASP LEU ALA VAL GLU LEU GLY ALA SEQRES 11 A 386 GLU THR TYR VAL ALA TRP GLY GLY ARG GLU GLY ALA GLU SEQRES 12 A 386 SER GLY GLY ALA LYS ASP VAL ARG ASP ALA LEU ASP ARG SEQRES 13 A 386 MET LYS GLU ALA PHE ASP LEU LEU GLY GLU TYR VAL THR SEQRES 14 A 386 SER GLN GLY TYR ASP ILE ARG PHE ALA ILE GLU PRO LYS SEQRES 15 A 386 PRO ASN GLU PRO ARG GLY ASP ILE LEU LEU PRO THR VAL SEQRES 16 A 386 GLY HIS ALA LEU ALA PHE ILE GLU ARG LEU GLU ARG PRO SEQRES 17 A 386 GLU LEU TYR GLY VAL ASN PRO GLU VAL GLY HIS GLU GLN SEQRES 18 A 386 MET ALA GLY LEU ASN PHE PRO HIS GLY ILE ALA GLN ALA SEQRES 19 A 386 LEU TRP ALA GLY LYS LEU PHE HIS ILE ASP LEU ASN GLY SEQRES 20 A 386 GLN ASN GLY ILE LYS TYR ASP GLN ASP LEU ARG PHE GLY SEQRES 21 A 386 ALA GLY ASP LEU ARG ALA ALA PHE TRP LEU VAL ASP LEU SEQRES 22 A 386 LEU GLU SER ALA GLY TYR SER GLY PRO ARG HIS PHE ASP SEQRES 23 A 386 PHE LYS PRO PRO ARG THR GLU ASP PHE ASP GLY VAL TRP SEQRES 24 A 386 ALA SER ALA ALA GLY CYS MET ARG ASN TYR LEU ILE LEU SEQRES 25 A 386 LYS GLU ARG ALA ALA ALA PHE ARG ALA ASP PRO GLU VAL SEQRES 26 A 386 GLN GLU ALA LEU ARG ALA SER ARG LEU ASP GLU LEU ALA SEQRES 27 A 386 ARG PRO THR ALA ALA ASP GLY LEU GLN ALA LEU LEU ASP SEQRES 28 A 386 ASP ARG SER ALA PHE GLU GLU PHE ASP VAL ASP ALA ALA SEQRES 29 A 386 ALA ALA ARG GLY MET ALA PHE GLU ARG LEU ASP GLN LEU SEQRES 30 A 386 ALA MET ASP HIS LEU LEU GLY ALA ARG HET GOL A 401 14 HET GOL A 402 14 HET GOL A 403 14 HET GOL A 404 14 HET MN A 405 1 HET MN A 406 2 HET MG A 407 1 HET MG A 408 2 HET MG A 409 1 HET MG A 410 2 HETNAM GOL GLYCEROL HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 4(C3 H8 O3) FORMUL 6 MN 2(MN 2+) FORMUL 8 MG 4(MG 2+) FORMUL 12 HOH *683(H2 O) HELIX 1 AA1 THR A 6 ASP A 9 5 4 HELIX 2 AA2 LEU A 15 GLY A 19 1 5 HELIX 3 AA3 ASP A 35 LEU A 46 1 12 HELIX 4 AA4 ASP A 55 ILE A 59 1 5 HELIX 5 AA5 SER A 64 GLY A 83 1 20 HELIX 6 AA6 HIS A 96 LYS A 100 5 5 HELIX 7 AA7 ASP A 108 LEU A 129 1 22 HELIX 8 AA8 SER A 145 LYS A 149 5 5 HELIX 9 AA9 ASP A 150 GLN A 172 1 23 HELIX 10 AB1 THR A 195 GLU A 204 1 10 HELIX 11 AB2 ARG A 208 GLU A 210 5 3 HELIX 12 AB3 GLU A 217 ALA A 224 1 8 HELIX 13 AB4 ASN A 227 ALA A 238 1 12 HELIX 14 AB5 ASP A 264 GLY A 279 1 16 HELIX 15 AB6 ASP A 295 ASP A 323 1 29 HELIX 16 AB7 ASP A 323 SER A 333 1 11 HELIX 17 AB8 ARG A 334 ALA A 339 1 6 HELIX 18 AB9 GLY A 346 ASP A 352 1 7 HELIX 19 AC1 ASP A 353 PHE A 357 5 5 HELIX 20 AC2 ASP A 361 ARG A 368 1 8 HELIX 21 AC3 ALA A 371 GLY A 385 1 15 SHEET 1 AA1 8 TYR A 212 VAL A 214 0 SHEET 2 AA1 8 ARG A 177 ILE A 180 1 N ILE A 180 O GLY A 213 SHEET 3 AA1 8 THR A 133 ALA A 136 1 N TYR A 134 O ARG A 177 SHEET 4 AA1 8 LYS A 85 THR A 90 1 N ALA A 89 O VAL A 135 SHEET 5 AA1 8 GLY A 50 HIS A 54 1 N VAL A 51 O LYS A 85 SHEET 6 AA1 8 PHE A 11 GLY A 14 1 N PHE A 13 O THR A 52 SHEET 7 AA1 8 ARG A 284 PHE A 286 1 O PHE A 286 N THR A 12 SHEET 8 AA1 8 ASP A 245 LEU A 246 1 N LEU A 246 O HIS A 285 SHEET 1 AA2 2 GLY A 142 ALA A 143 0 SHEET 2 AA2 2 ASP A 190 ILE A 191 -1 O ASP A 190 N ALA A 143 LINK NE ARG A 23 MG A MG A 410 1555 1555 2.75 LINK N ALA A 29 MG A MG A 410 1555 1555 2.83 LINK OE2AGLU A 181 MN MN A 405 1555 1555 2.14 LINK OE2BGLU A 181 MN MN A 405 1555 1555 2.31 LINK OE1AGLU A 217 MN MN A 405 1555 1555 2.20 LINK OE1BGLU A 217 MN MN A 405 1555 1555 1.80 LINK OE2AGLU A 217 MN A MN A 406 1555 1555 2.07 LINK NE2 HIS A 220 MN A MN A 406 1555 1555 2.60 LINK NE2 HIS A 220 MN B MN A 406 1555 1555 2.70 LINK NE2AHIS A 243 MG MG A 407 1555 1555 2.51 LINK NE2BHIS A 243 MG MG A 407 1555 1555 2.98 LINK OD2 ASP A 245 MN MN A 405 1555 1555 2.35 LINK OD1BASP A 255 MN B MN A 406 1555 1555 2.05 LINK OD2BASP A 255 MN B MN A 406 1555 1555 1.74 LINK OD1 ASP A 257 MN A MN A 406 1555 1555 2.36 LINK OD1 ASP A 257 MN B MN A 406 1555 1555 2.52 LINK OD2 ASP A 287 MN MN A 405 1555 1555 2.06 LINK O GLU A 328 MG MG A 409 1555 1555 2.86 LINK OE1BGLU A 328 MG MG A 409 1555 1555 2.93 LINK OE2BGLU A 328 MG MG A 409 1555 1555 1.82 LINK O2 GOL A 401 MN MN A 405 1555 1555 2.32 LINK O3 GOL A 401 MN MN A 405 1555 1555 2.37 LINK MN A MN A 406 O HOH A 507 1555 1555 2.51 LINK MN B MN A 406 O HOH A 507 1555 1555 2.80 LINK MN A MN A 406 O HOH A 668 1555 1555 2.33 LINK MN B MN A 406 O HOH A 668 1555 1555 2.47 LINK MG A MG A 408 O HOH A 641 1555 1555 2.58 LINK MG A MG A 408 O HOH A 976 1555 1555 2.79 LINK MG B MG A 408 O HOH A 976 1555 1555 2.22 LINK MG B MG A 408 O HOH A1013 1555 1555 2.60 LINK MG MG A 409 O HOH A 567 1555 1555 2.76 LINK MG MG A 409 O HOH A1020 1555 1555 2.64 LINK MG A MG A 410 O HOH A 892 1555 1555 2.61 LINK MG B MG A 410 O HOH A1071 1555 1555 2.17 CISPEP 1 GLU A 186 PRO A 187 0 25.25 CISPEP 2 GLU A 186 PRO A 187 0 21.31 CRYST1 92.263 98.211 102.299 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010839 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010182 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009775 0.00000 CONECT 449 6745 CONECT 545 6745 CONECT 3099 6738 CONECT 3100 6738 CONECT 3747 6738 CONECT 3748 6738 CONECT 3749 6739 CONECT 3792 6739 6740 CONECT 4166 6741 CONECT 4167 6741 CONECT 4206 6738 CONECT 4422 6740 CONECT 4424 6740 CONECT 4473 6739 6740 CONECT 4993 6738 CONECT 5681 6744 CONECT 5689 6744 CONECT 5691 6744 CONECT 6682 6683 6684 6688 6689 CONECT 6683 6682 6690 CONECT 6684 6682 6685 6686 6691 CONECT 6685 6684 6692 6738 CONECT 6686 6684 6687 6693 6694 CONECT 6687 6686 6695 6738 CONECT 6688 6682 CONECT 6689 6682 CONECT 6690 6683 CONECT 6691 6684 CONECT 6692 6685 CONECT 6693 6686 CONECT 6694 6686 CONECT 6695 6687 CONECT 6696 6697 6698 6702 6703 CONECT 6697 6696 6704 CONECT 6698 6696 6699 6700 6705 CONECT 6699 6698 6706 CONECT 6700 6698 6701 6707 6708 CONECT 6701 6700 6709 CONECT 6702 6696 CONECT 6703 6696 CONECT 6704 6697 CONECT 6705 6698 CONECT 6706 6699 CONECT 6707 6700 CONECT 6708 6700 CONECT 6709 6701 CONECT 6710 6711 6712 6716 6717 CONECT 6711 6710 6718 CONECT 6712 6710 6713 6714 6719 CONECT 6713 6712 6720 CONECT 6714 6712 6715 6721 6722 CONECT 6715 6714 6723 CONECT 6716 6710 CONECT 6717 6710 CONECT 6718 6711 CONECT 6719 6712 CONECT 6720 6713 CONECT 6721 6714 CONECT 6722 6714 CONECT 6723 6715 CONECT 6724 6725 6726 6730 6731 CONECT 6725 6724 6732 CONECT 6726 6724 6727 6728 6733 CONECT 6727 6726 6734 CONECT 6728 6726 6729 6735 6736 CONECT 6729 6728 6737 CONECT 6730 6724 CONECT 6731 6724 CONECT 6732 6725 CONECT 6733 6726 CONECT 6734 6727 CONECT 6735 6728 CONECT 6736 6728 CONECT 6737 6729 CONECT 6738 3099 3100 3747 3748 CONECT 6738 4206 4993 6685 6687 CONECT 6739 3749 3792 4473 6759 CONECT 6739 6942 CONECT 6740 3792 4422 4424 4473 CONECT 6740 6759 6942 CONECT 6741 4166 4167 CONECT 6742 6913 7294 CONECT 6743 7294 7337 CONECT 6744 5681 5689 5691 6832 CONECT 6744 7345 CONECT 6745 449 545 7191 CONECT 6746 7409 CONECT 6759 6739 6740 CONECT 6832 6744 CONECT 6913 6742 CONECT 6942 6739 6740 CONECT 7191 6745 CONECT 7294 6742 6743 CONECT 7337 6743 CONECT 7345 6744 CONECT 7409 6746 MASTER 385 0 10 21 10 0 0 6 3755 1 96 30 END