HEADER VIRUS LIKE PARTICLE 20-OCT-25 9T0Q TITLE EXPANDED COXSACKIEVIRUS B1 (CVB1) VIRUS-LIKE PARTICLE DELTA-PALXA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: 1; COMPND 4 SYNONYM: P1D,VIRION PROTEIN 1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: DELETION OF 25-39 AA FROM GENBANK: XLU17696.1 MATURE COMPND 8 PEPTIDE VP1; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CAPSID PROTEIN VP2; COMPND 11 CHAIN: 2; COMPND 12 SYNONYM: P1B,VIRION PROTEIN 2; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: CAPSID PROTEIN VP3; COMPND 16 CHAIN: 3; COMPND 17 SYNONYM: P1C,VIRION PROTEIN 3; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROVIRUS B; SOURCE 3 ORGANISM_TAXID: 138949; SOURCE 4 STRAIN: WILD TYPE STRAIN 10796; SOURCE 5 VARIANT: DELTA25-39; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: FLASHBAC ULTRA; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ENTEROVIRUS B; SOURCE 13 ORGANISM_TAXID: 138949; SOURCE 14 STRAIN: WILD TYPE STRAIN 10796; SOURCE 15 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: FLASHBAC ULTRA; SOURCE 20 MOL_ID: 3; SOURCE 21 ORGANISM_SCIENTIFIC: ENTEROVIRUS B; SOURCE 22 ORGANISM_TAXID: 138949; SOURCE 23 STRAIN: WILD TYPE STRAIN 10796; SOURCE 24 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 26 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 27 EXPRESSION_SYSTEM_PLASMID: FLASHBAC ULTRA KEYWDS COXSACKIEVIRUS B1, VIRUS-LIKE PARTICLE, ICOSAHEDRAL, VIRUS LIKE KEYWDS 2 PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR S.GURIANOV,S.J.BUTCHER REVDAT 1 04-NOV-26 9T0Q 0 JRNL AUTH S.SOPPELA,V.STONE,L.KUMMOLA,I.MUSTONEN,S.GROHN,S.GURYANOV, JRNL AUTH 2 K.L.L.AHMAD,S.J.BUTCHER,O.LAITINEN,M.FLODSTROM-TULLBERG, JRNL AUTH 3 M.M.HANKANIEMI JRNL TITL COXSACKIE B1 VIRUS-LIKE PARTICLE VACCINE MODIFIED TO EXCLUDE JRNL TITL 2 A CONSERVED CAPSID REGION REMAINS STABLE AT +4C FOR 2 YEARS JRNL TITL 3 AND INDUCES A BALANCED IMMUNE RESPONSE WITH AS04 ADJUVANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, UCSF REMARK 3 CHIMERAX, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC, ISOLDE, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 9FJD REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.060 REMARK 3 NUMBER OF PARTICLES : 1445 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9T0Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-OCT-25. REMARK 100 THE DEPOSITION ID IS D_1292151509. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : MODIFIED CVB1 VLP; ASYMMETRIC REMARK 245 UNIT OF CVB1 VLP REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : SELF-ASSEMBLED VIRUS-LIKE REMARK 245 PARTICLES WHERE INDIVIDUAL CHAINS WERE PRODUCED BY CLEAVAGE OF REMARK 245 POLYPROTEIN BY CO-EXPRESSED VIRAL PROTEASE.; INDIVIDUAL CHAINS REMARK 245 WERE PRODUCED BY CLEAVAGE OF POLYPROTEIN BY CO-EXPRESSED VIRAL REMARK 245 PROTEASE. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 800 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 150000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 180-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 180-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 0.500000 -0.809017 231.47520 REMARK 350 BIOMT2 2 0.500000 -0.809017 -0.309017 374.53475 REMARK 350 BIOMT3 2 -0.809017 -0.309017 -0.500000 606.00995 REMARK 350 BIOMT1 3 0.000000 0.000000 -1.000000 462.95041 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 462.95041 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 -0.309017 0.500000 -0.809017 374.53475 REMARK 350 BIOMT2 4 0.500000 0.809017 0.309017 -143.05954 REMARK 350 BIOMT3 4 0.809017 -0.309017 -0.500000 231.47520 REMARK 350 BIOMT1 5 -0.809017 0.309017 -0.500000 462.95041 REMARK 350 BIOMT2 5 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 5 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 6 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 6 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 6 0.309017 -0.500000 -0.809017 462.95041 REMARK 350 BIOMT1 7 0.309017 -0.500000 -0.809017 462.95041 REMARK 350 BIOMT2 7 -0.500000 -0.809017 0.309017 462.95041 REMARK 350 BIOMT3 7 -0.809017 0.309017 -0.500000 462.95041 REMARK 350 BIOMT1 8 -0.309017 -0.500000 -0.809017 606.00995 REMARK 350 BIOMT2 8 0.500000 -0.809017 0.309017 231.47520 REMARK 350 BIOMT3 8 -0.809017 -0.309017 0.500000 374.53475 REMARK 350 BIOMT1 9 -0.500000 0.809017 -0.309017 231.47520 REMARK 350 BIOMT2 9 -0.809017 -0.309017 0.500000 374.53475 REMARK 350 BIOMT3 9 0.309017 0.500000 0.809017 -143.05954 REMARK 350 BIOMT1 10 0.809017 0.309017 -0.500000 88.41566 REMARK 350 BIOMT2 10 0.309017 0.500000 0.809017 -143.05954 REMARK 350 BIOMT3 10 0.500000 -0.809017 0.309017 231.47520 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 11 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.809017 -0.309017 -0.500000 231.47520 REMARK 350 BIOMT2 12 0.309017 -0.500000 0.809017 88.41566 REMARK 350 BIOMT3 12 -0.500000 -0.809017 -0.309017 606.00995 REMARK 350 BIOMT1 13 -0.809017 -0.309017 -0.500000 606.00995 REMARK 350 BIOMT2 13 -0.309017 -0.500000 0.809017 231.47520 REMARK 350 BIOMT3 13 -0.500000 0.809017 0.309017 88.41566 REMARK 350 BIOMT1 14 -0.500000 -0.809017 0.309017 462.95041 REMARK 350 BIOMT2 14 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 14 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 15 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 15 -0.500000 -0.809017 0.309017 462.95041 REMARK 350 BIOMT3 15 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 16 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 16 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 16 -0.500000 -0.809017 0.309017 462.95041 REMARK 350 BIOMT1 17 0.809017 0.309017 0.500000 -143.05954 REMARK 350 BIOMT2 17 -0.309017 -0.500000 0.809017 231.47520 REMARK 350 BIOMT3 17 0.500000 -0.809017 -0.309017 374.53475 REMARK 350 BIOMT1 18 0.000000 -1.000000 0.000000 462.95041 REMARK 350 BIOMT2 18 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 18 -1.000000 0.000000 0.000000 462.95041 REMARK 350 BIOMT1 19 -0.809017 0.309017 0.500000 231.47520 REMARK 350 BIOMT2 19 0.309017 -0.500000 0.809017 88.41566 REMARK 350 BIOMT3 19 0.500000 0.809017 0.309017 -143.05954 REMARK 350 BIOMT1 20 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 20 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 20 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 21 0.309017 -0.500000 0.809017 88.41566 REMARK 350 BIOMT2 21 -0.500000 -0.809017 -0.309017 606.00995 REMARK 350 BIOMT3 21 0.809017 -0.309017 -0.500000 231.47520 REMARK 350 BIOMT1 22 -0.309017 -0.500000 0.809017 231.47520 REMARK 350 BIOMT2 22 -0.500000 0.809017 0.309017 88.41566 REMARK 350 BIOMT3 22 -0.809017 -0.309017 -0.500000 606.00995 REMARK 350 BIOMT1 23 0.500000 -0.809017 0.309017 231.47520 REMARK 350 BIOMT2 23 -0.809017 -0.309017 0.500000 374.53475 REMARK 350 BIOMT3 23 -0.309017 -0.500000 -0.809017 606.00995 REMARK 350 BIOMT1 24 -0.809017 -0.309017 0.500000 374.53475 REMARK 350 BIOMT2 24 0.309017 0.500000 0.809017 -143.05954 REMARK 350 BIOMT3 24 -0.500000 0.809017 -0.309017 231.47520 REMARK 350 BIOMT1 25 0.309017 0.500000 0.809017 -143.05954 REMARK 350 BIOMT2 25 0.500000 -0.809017 0.309017 231.47520 REMARK 350 BIOMT3 25 0.809017 0.309017 -0.500000 88.41566 REMARK 350 BIOMT1 26 0.500000 0.809017 0.309017 -143.05954 REMARK 350 BIOMT2 26 0.809017 -0.309017 -0.500000 231.47520 REMARK 350 BIOMT3 26 -0.309017 0.500000 -0.809017 374.53475 REMARK 350 BIOMT1 27 0.500000 -0.809017 -0.309017 374.53475 REMARK 350 BIOMT2 27 -0.809017 -0.309017 -0.500000 606.00995 REMARK 350 BIOMT3 27 0.309017 0.500000 -0.809017 231.47520 REMARK 350 BIOMT1 28 -1.000000 0.000000 0.000000 462.95041 REMARK 350 BIOMT2 28 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 28 0.000000 0.000000 -1.000000 462.95041 REMARK 350 BIOMT1 29 -0.500000 -0.809017 -0.309017 606.00995 REMARK 350 BIOMT2 29 -0.809017 0.309017 0.500000 231.47520 REMARK 350 BIOMT3 29 -0.309017 0.500000 -0.809017 374.53475 REMARK 350 BIOMT1 30 -0.500000 0.809017 0.309017 88.41566 REMARK 350 BIOMT2 30 0.809017 0.309017 0.500000 -143.05954 REMARK 350 BIOMT3 30 0.309017 0.500000 -0.809017 231.47520 REMARK 350 BIOMT1 31 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 31 0.000000 -1.000000 0.000000 462.95041 REMARK 350 BIOMT3 31 0.000000 0.000000 -1.000000 462.95041 REMARK 350 BIOMT1 32 0.309017 0.500000 -0.809017 231.47520 REMARK 350 BIOMT2 32 -0.500000 0.809017 0.309017 88.41566 REMARK 350 BIOMT3 32 0.809017 0.309017 0.500000 -143.05954 REMARK 350 BIOMT1 33 0.000000 0.000000 -1.000000 462.95041 REMARK 350 BIOMT2 33 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 33 0.000000 -1.000000 0.000000 462.95041 REMARK 350 BIOMT1 34 -0.309017 0.500000 -0.809017 374.53475 REMARK 350 BIOMT2 34 -0.500000 -0.809017 -0.309017 606.00995 REMARK 350 BIOMT3 34 -0.809017 0.309017 0.500000 231.47520 REMARK 350 BIOMT1 35 -0.809017 0.309017 -0.500000 462.95041 REMARK 350 BIOMT2 35 0.309017 -0.500000 -0.809017 462.95041 REMARK 350 BIOMT3 35 -0.500000 -0.809017 0.309017 462.95041 REMARK 350 BIOMT1 36 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 36 -0.809017 0.309017 -0.500000 462.95041 REMARK 350 BIOMT3 36 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 37 0.309017 -0.500000 -0.809017 462.95041 REMARK 350 BIOMT2 37 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 37 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 38 -0.309017 -0.500000 -0.809017 606.00995 REMARK 350 BIOMT2 38 -0.500000 0.809017 -0.309017 231.47520 REMARK 350 BIOMT3 38 0.809017 0.309017 -0.500000 88.41566 REMARK 350 BIOMT1 39 -0.500000 0.809017 -0.309017 231.47520 REMARK 350 BIOMT2 39 0.809017 0.309017 -0.500000 88.41566 REMARK 350 BIOMT3 39 -0.309017 -0.500000 -0.809017 606.00995 REMARK 350 BIOMT1 40 0.809017 0.309017 -0.500000 88.41566 REMARK 350 BIOMT2 40 -0.309017 -0.500000 -0.809017 606.00995 REMARK 350 BIOMT3 40 -0.500000 0.809017 -0.309017 231.47520 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 41 0.000000 0.000000 -1.000000 462.95041 REMARK 350 BIOMT3 41 -1.000000 0.000000 0.000000 462.95041 REMARK 350 BIOMT1 42 0.809017 -0.309017 -0.500000 231.47520 REMARK 350 BIOMT2 42 -0.309017 0.500000 -0.809017 374.53475 REMARK 350 BIOMT3 42 0.500000 0.809017 0.309017 -143.05954 REMARK 350 BIOMT1 43 -0.809017 -0.309017 -0.500000 606.00995 REMARK 350 BIOMT2 43 0.309017 0.500000 -0.809017 231.47520 REMARK 350 BIOMT3 43 0.500000 -0.809017 -0.309017 374.53475 REMARK 350 BIOMT1 44 -0.500000 -0.809017 0.309017 462.95041 REMARK 350 BIOMT2 44 -0.809017 0.309017 -0.500000 462.95041 REMARK 350 BIOMT3 44 0.309017 -0.500000 -0.809017 462.95041 REMARK 350 BIOMT1 45 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 45 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 45 -0.809017 0.309017 -0.500000 462.95041 REMARK 350 BIOMT1 46 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 46 0.309017 -0.500000 -0.809017 462.95041 REMARK 350 BIOMT3 46 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 47 0.809017 0.309017 0.500000 -143.05954 REMARK 350 BIOMT2 47 0.309017 0.500000 -0.809017 231.47520 REMARK 350 BIOMT3 47 -0.500000 0.809017 0.309017 88.41566 REMARK 350 BIOMT1 48 0.000000 -1.000000 0.000000 462.95041 REMARK 350 BIOMT2 48 0.000000 0.000000 -1.000000 462.95041 REMARK 350 BIOMT3 48 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 49 -0.809017 0.309017 0.500000 231.47520 REMARK 350 BIOMT2 49 -0.309017 0.500000 -0.809017 374.53475 REMARK 350 BIOMT3 49 -0.500000 -0.809017 -0.309017 606.00995 REMARK 350 BIOMT1 50 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 50 -1.000000 0.000000 0.000000 462.95041 REMARK 350 BIOMT3 50 0.000000 -1.000000 0.000000 462.95041 REMARK 350 BIOMT1 51 0.309017 -0.500000 0.809017 88.41566 REMARK 350 BIOMT2 51 0.500000 0.809017 0.309017 -143.05954 REMARK 350 BIOMT3 51 -0.809017 0.309017 0.500000 231.47520 REMARK 350 BIOMT1 52 -0.309017 -0.500000 0.809017 231.47520 REMARK 350 BIOMT2 52 0.500000 -0.809017 -0.309017 374.53475 REMARK 350 BIOMT3 52 0.809017 0.309017 0.500000 -143.05954 REMARK 350 BIOMT1 53 0.500000 -0.809017 0.309017 231.47520 REMARK 350 BIOMT2 53 0.809017 0.309017 -0.500000 88.41566 REMARK 350 BIOMT3 53 0.309017 0.500000 0.809017 -143.05954 REMARK 350 BIOMT1 54 -0.809017 -0.309017 0.500000 374.53475 REMARK 350 BIOMT2 54 -0.309017 -0.500000 -0.809017 606.00995 REMARK 350 BIOMT3 54 0.500000 -0.809017 0.309017 231.47520 REMARK 350 BIOMT1 55 0.309017 0.500000 0.809017 -143.05954 REMARK 350 BIOMT2 55 -0.500000 0.809017 -0.309017 231.47520 REMARK 350 BIOMT3 55 -0.809017 -0.309017 0.500000 374.53475 REMARK 350 BIOMT1 56 0.500000 0.809017 0.309017 -143.05954 REMARK 350 BIOMT2 56 -0.809017 0.309017 0.500000 231.47520 REMARK 350 BIOMT3 56 0.309017 -0.500000 0.809017 88.41566 REMARK 350 BIOMT1 57 0.500000 -0.809017 -0.309017 374.53475 REMARK 350 BIOMT2 57 0.809017 0.309017 0.500000 -143.05954 REMARK 350 BIOMT3 57 -0.309017 -0.500000 0.809017 231.47520 REMARK 350 BIOMT1 58 -1.000000 0.000000 0.000000 462.95041 REMARK 350 BIOMT2 58 0.000000 -1.000000 0.000000 462.95041 REMARK 350 BIOMT3 58 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 59 -0.500000 -0.809017 -0.309017 606.00995 REMARK 350 BIOMT2 59 0.809017 -0.309017 -0.500000 231.47520 REMARK 350 BIOMT3 59 0.309017 -0.500000 0.809017 88.41566 REMARK 350 BIOMT1 60 -0.500000 0.809017 0.309017 88.41566 REMARK 350 BIOMT2 60 -0.809017 -0.309017 -0.500000 606.00995 REMARK 350 BIOMT3 60 -0.309017 -0.500000 0.809017 231.47520 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY 1 16 REMARK 465 PRO 1 17 REMARK 465 VAL 1 18 REMARK 465 GLU 1 19 REMARK 465 GLU 1 20 REMARK 465 SER 1 21 REMARK 465 VAL 1 22 REMARK 465 GLU 1 23 REMARK 465 ARG 1 24 REMARK 465 ALA 1 25 REMARK 465 MET 1 26 REMARK 465 VAL 1 27 REMARK 465 ARG 1 28 REMARK 465 VAL 1 29 REMARK 465 ALA 1 30 REMARK 465 ASP 1 31 REMARK 465 THR 1 32 REMARK 465 VAL 1 33 REMARK 465 SER 1 34 REMARK 465 SER 1 35 REMARK 465 ARG 1 36 REMARK 465 PRO 1 37 REMARK 465 THR 1 38 REMARK 465 ASN 1 39 REMARK 465 SER 1 40 REMARK 465 GLN 1 41 REMARK 465 VAL 1 42 REMARK 465 VAL 1 43 REMARK 465 PRO 1 44 REMARK 465 SER 1 45 REMARK 465 ASP 1 46 REMARK 465 THR 1 47 REMARK 465 MET 1 48 REMARK 465 GLN 1 49 REMARK 465 THR 1 50 REMARK 465 ARG 1 51 REMARK 465 HIS 1 52 REMARK 465 VAL 1 53 REMARK 465 LYS 1 54 REMARK 465 SER 1 200 REMARK 465 ARG 1 201 REMARK 465 ASN 1 202 REMARK 465 THR 1 278 REMARK 465 SER 2 1 REMARK 465 PRO 2 2 REMARK 465 SER 2 3 REMARK 465 ALA 2 4 REMARK 465 GLU 2 5 REMARK 465 GLU 2 6 REMARK 465 CYS 2 7 REMARK 465 GLY 2 8 REMARK 465 PHE 2 9 REMARK 465 SER 2 10 REMARK 465 ASN 2 45 REMARK 465 GLU 2 46 REMARK 465 ALA 2 47 REMARK 465 THR 2 48 REMARK 465 ALA 2 49 REMARK 465 GLN 2 263 REMARK 465 HIS 3 175 REMARK 465 TYR 3 176 REMARK 465 ARG 3 177 REMARK 465 TYR 3 178 REMARK 465 VAL 3 179 REMARK 465 VAL 3 180 REMARK 465 GLU 3 181 REMARK 465 ASP 3 182 REMARK 465 GLU 3 183 REMARK 465 TYR 3 184 REMARK 465 THR 3 235 REMARK 465 PHE 3 236 REMARK 465 TYR 3 237 REMARK 465 GLN 3 238 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG 1 59 -175.51 -172.41 REMARK 500 LYS 1 85 30.14 -92.20 REMARK 500 LEU 1 106 -9.80 -55.87 REMARK 500 PRO 1 181 -179.08 -69.82 REMARK 500 ALA 1 188 146.28 -174.91 REMARK 500 VAL 1 246 72.14 58.89 REMARK 500 TYR 2 35 31.45 -141.47 REMARK 500 PRO 2 239 5.21 -69.36 REMARK 500 TRP 3 170 76.68 42.11 REMARK 500 PHE 3 230 34.64 -97.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-55411 RELATED DB: EMDB REMARK 900 EXPANDED COXSACKIEVIRUS B1 (CVB1) VIRUS-LIKE PARTICLE DELTA-PALXA DBREF 9T0Q 1 16 278 UNP P08291 POLG_CXB1J 571 848 DBREF 9T0Q 2 1 263 UNP P08291 POLG_CXB1J 70 332 DBREF 9T0Q 3 1 238 UNP P08291 POLG_CXB1J 333 570 SEQADV 9T0Q ARG 1 36 UNP P08291 LYS 591 VARIANT SEQADV 9T0Q 1 UNP P08291 SER 595 DELETION SEQADV 9T0Q 1 UNP P08291 GLU 596 DELETION SEQADV 9T0Q 1 UNP P08291 SER 597 DELETION SEQADV 9T0Q 1 UNP P08291 ILE 598 DELETION SEQADV 9T0Q 1 UNP P08291 PRO 599 DELETION SEQADV 9T0Q 1 UNP P08291 ALA 600 DELETION SEQADV 9T0Q 1 UNP P08291 LEU 601 DELETION SEQADV 9T0Q 1 UNP P08291 THR 602 DELETION SEQADV 9T0Q 1 UNP P08291 ALA 603 DELETION SEQADV 9T0Q 1 UNP P08291 ALA 604 DELETION SEQADV 9T0Q 1 UNP P08291 GLU 605 DELETION SEQADV 9T0Q 1 UNP P08291 THR 606 DELETION SEQADV 9T0Q 1 UNP P08291 GLY 607 DELETION SEQADV 9T0Q 1 UNP P08291 HIS 608 DELETION SEQADV 9T0Q 1 UNP P08291 THR 609 DELETION SEQADV 9T0Q ALA 1 71 UNP P08291 SER 641 VARIANT SEQADV 9T0Q THR 1 80 UNP P08291 ASN 650 VARIANT SEQADV 9T0Q 1 UNP P08291 LEU 671 DELETION SEQADV 9T0Q LEU 1 106 UNP P08291 INSERTION SEQADV 9T0Q GLN 1 125 UNP P08291 GLU 695 VARIANT SEQADV 9T0Q HIS 1 139 UNP P08291 GLN 709 VARIANT SEQADV 9T0Q THR 1 264 UNP P08291 ASN 834 VARIANT SEQADV 9T0Q VAL 1 273 UNP P08291 SER 843 VARIANT SEQADV 9T0Q GLY 1 274 UNP P08291 ASN 844 VARIANT SEQADV 9T0Q PHE 2 9 UNP P08291 TYR 78 VARIANT SEQADV 9T0Q ALA 2 49 UNP P08291 GLY 118 VARIANT SEQADV 9T0Q GLU 2 142 UNP P08291 LYS 211 VARIANT SEQADV 9T0Q THR 2 151 UNP P08291 ASN 220 VARIANT SEQADV 9T0Q GLN 2 159 UNP P08291 GLU 228 VARIANT SEQADV 9T0Q ILE 2 160 UNP P08291 VAL 229 VARIANT SEQADV 9T0Q GLU 2 162 UNP P08291 THR 231 VARIANT SEQADV 9T0Q THR 2 163 UNP P08291 SER 232 VARIANT SEQADV 9T0Q SER 2 165 UNP P08291 ASP 234 VARIANT SEQADV 9T0Q TYR 2 187 UNP P08291 PHE 256 VARIANT SEQADV 9T0Q PHE 2 216 UNP P08291 TYR 285 VARIANT SEQADV 9T0Q GLU 3 59 UNP P08291 ASP 391 VARIANT SEQADV 9T0Q ALA 3 60 UNP P08291 ASN 392 VARIANT SEQADV 9T0Q SER 3 64 UNP P08291 GLY 396 VARIANT SEQADV 9T0Q GLY 3 79 UNP P08291 ARG 411 VARIANT SEQADV 9T0Q LYS 3 80 UNP P08291 ARG 412 VARIANT SEQADV 9T0Q GLY 3 93 UNP P08291 ASN 425 VARIANT SEQADV 9T0Q LYS 3 146 UNP P08291 ARG 478 VARIANT SEQADV 9T0Q ILE 3 190 UNP P08291 VAL 522 VARIANT SEQADV 9T0Q VAL 3 199 UNP P08291 ILE 531 VARIANT SEQADV 9T0Q SER 3 207 UNP P08291 THR 539 VARIANT SEQADV 9T0Q THR 3 235 UNP P08291 ASN 567 VARIANT SEQRES 1 1 263 GLY PRO VAL GLU GLU SER VAL GLU ARG ALA MET VAL ARG SEQRES 2 1 263 VAL ALA ASP THR VAL SER SER ARG PRO THR ASN SER GLN SEQRES 3 1 263 VAL VAL PRO SER ASP THR MET GLN THR ARG HIS VAL LYS SEQRES 4 1 263 ASN TYR HIS SER ARG SER GLU SER SER ILE GLU ASN PHE SEQRES 5 1 263 LEU CYS ARG ALA ALA CYS VAL TYR TYR ALA THR TYR THR SEQRES 6 1 263 ASN ASN SER GLU LYS GLY TYR ALA GLU TRP VAL ILE ASN SEQRES 7 1 263 THR ARG GLN VAL ALA GLN LEU ARG ARG LYS LEU GLU LEU SEQRES 8 1 263 PHE THR TYR LEU ARG PHE ASP LEU GLU LEU THR PHE VAL SEQRES 9 1 263 ILE THR SER ALA GLN GLN PRO SER THR ALA THR SER VAL SEQRES 10 1 263 ASP ALA PRO VAL GLN THR HIS GLN ILE MET TYR VAL PRO SEQRES 11 1 263 PRO GLY GLY PRO VAL PRO THR LYS VAL THR ASP TYR ALA SEQRES 12 1 263 TRP GLN THR SER THR ASN PRO SER VAL PHE TRP THR GLU SEQRES 13 1 263 GLY ASN ALA PRO PRO ARG MET SER ILE PRO PHE ILE SER SEQRES 14 1 263 ILE GLY ASN ALA TYR SER CYS PHE TYR ASP GLY TRP THR SEQRES 15 1 263 GLN PHE SER ARG ASN GLY VAL TYR GLY ILE ASN THR LEU SEQRES 16 1 263 ASN ASN MET GLY THR LEU TYR MET ARG HIS VAL ASN GLU SEQRES 17 1 263 ALA GLY GLN GLY PRO ILE LYS SER THR VAL ARG ILE TYR SEQRES 18 1 263 PHE LYS PRO LYS HIS VAL LYS ALA TRP VAL PRO ARG PRO SEQRES 19 1 263 PRO ARG LEU CYS GLN TYR GLU LYS GLN LYS ASN VAL ASN SEQRES 20 1 263 PHE THR PRO THR GLY VAL THR THR THR ARG VAL GLY ILE SEQRES 21 1 263 THR THR THR SEQRES 1 2 263 SER PRO SER ALA GLU GLU CYS GLY PHE SER ASP ARG VAL SEQRES 2 2 263 ARG SER ILE THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 2 263 GLU CYS ALA ASN VAL VAL VAL GLY TYR GLY VAL TRP PRO SEQRES 4 2 263 GLU TYR LEU LYS ASP ASN GLU ALA THR ALA GLU ASP GLN SEQRES 5 2 263 PRO THR GLN PRO ASP VAL ALA THR CYS ARG PHE TYR THR SEQRES 6 2 263 LEU GLU SER VAL GLN TRP MET LYS ASN SER ALA GLY TRP SEQRES 7 2 263 TRP TRP LYS LEU PRO ASP ALA LEU SER GLN MET GLY LEU SEQRES 8 2 263 PHE GLY GLN ASN MET GLN TYR HIS TYR LEU GLY ARG THR SEQRES 9 2 263 GLY TYR THR ILE HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 2 263 HIS GLN GLY CYS LEU LEU VAL VAL CYS VAL PRO GLU ALA SEQRES 11 2 263 GLU MET GLY CYS SER ASN LEU ASN ASN THR PRO GLU PHE SEQRES 12 2 263 ALA GLU LEU SER GLY GLY ASP THR ALA ARG MET PHE THR SEQRES 13 2 263 ASP THR GLN ILE GLY GLU THR ASN SER LYS LYS VAL GLN SEQRES 14 2 263 THR ALA VAL TRP ASN ALA GLY MET GLY VAL GLY VAL GLY SEQRES 15 2 263 ASN LEU THR ILE TYR PRO HIS GLN TRP ILE ASN LEU ARG SEQRES 16 2 263 THR ASN ASN SER ALA THR ILE VAL MET PRO TYR ILE ASN SEQRES 17 2 263 SER VAL PRO MET ASP ASN MET PHE ARG HIS ASN ASN LEU SEQRES 18 2 263 THR LEU MET ILE ILE PRO PHE VAL PRO LEU ASN TYR SER SEQRES 19 2 263 GLU GLY SER SER PRO TYR VAL PRO ILE THR VAL THR ILE SEQRES 20 2 263 ALA PRO MET CYS ALA GLU TYR ASN GLY LEU ARG LEU ALA SEQRES 21 2 263 SER SER GLN SEQRES 1 3 238 GLY LEU PRO VAL MET THR THR PRO GLY SER THR GLN PHE SEQRES 2 3 238 LEU THR SER ASP ASP PHE GLN SER PRO SER ALA MET PRO SEQRES 3 3 238 GLN PHE ASP VAL THR PRO GLU MET GLN ILE PRO GLY ARG SEQRES 4 3 238 VAL ASN ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 3 238 VAL PRO VAL ASN ASN THR GLU ALA ASN VAL ASN SER LEU SEQRES 6 3 238 LYS ALA TYR GLN ILE PRO VAL GLN SER ASN SER ASP ASN SEQRES 7 3 238 GLY LYS GLN VAL PHE GLY PHE PRO LEU GLN PRO GLY ALA SEQRES 8 3 238 ASN GLY VAL LEU ASN ARG THR LEU LEU GLY GLU ILE LEU SEQRES 9 3 238 ASN TYR TYR THR HIS TRP SER GLY SER ILE LYS LEU THR SEQRES 10 3 238 PHE MET PHE CYS GLY SER ALA MET ALA THR GLY LYS PHE SEQRES 11 3 238 LEU LEU ALA TYR SER PRO PRO GLY ALA GLY VAL PRO LYS SEQRES 12 3 238 ASN ARG LYS ASP ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 3 238 ASP VAL GLY LEU GLN SER SER CYS VAL LEU CYS VAL PRO SEQRES 14 3 238 TRP ILE SER GLN THR HIS TYR ARG TYR VAL VAL GLU ASP SEQRES 15 3 238 GLU TYR THR ALA ALA GLY TYR ILE THR CYS TRP TYR GLN SEQRES 16 3 238 THR ASN ILE VAL VAL PRO ALA ASP VAL GLN SER SER CYS SEQRES 17 3 238 ASP ILE LEU CYS PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 3 238 VAL ARG MET LEU LYS ASP THR PRO PHE ILE ARG GLN ASP SEQRES 19 3 238 THR PHE TYR GLN HELIX 1 AA1 SER 1 63 CYS 1 69 1 7 HELIX 2 AA2 ASN 1 93 GLN 1 96 5 4 HELIX 3 AA3 VAL 1 97 LEU 1 106 1 10 HELIX 4 AA4 ASP 1 156 THR 1 161 5 6 HELIX 5 AA5 ASN 1 208 ASN 1 212 5 5 HELIX 6 AA6 VAL 2 58 CYS 2 61 5 4 HELIX 7 AA7 LEU 2 82 SER 2 87 1 6 HELIX 8 AA8 MET 2 89 HIS 2 99 1 11 HELIX 9 AA9 GLU 2 142 SER 2 147 1 6 HELIX 10 AB1 ALA 2 171 ALA 2 175 5 5 HELIX 11 AB2 GLY 2 180 TYR 2 187 5 8 HELIX 12 AB3 ASN 3 42 GLU 3 48 1 7 HELIX 13 AB4 ALA 3 60 GLN 3 69 5 10 HELIX 14 AB5 ASN 3 92 ARG 3 97 1 6 HELIX 15 AB6 THR 3 98 ASN 3 105 1 8 HELIX 16 AB7 ASN 3 144 GLY 3 151 1 8 SHEET 1 AA1 4 ALA 1 72 THR 1 80 0 SHEET 2 AA1 4 ILE 1 229 PRO 1 247 -1 O VAL 1 233 N ALA 1 77 SHEET 3 AA1 4 PHE 1 107 GLN 1 124 -1 N GLU 1 115 O LYS 1 238 SHEET 4 AA1 4 TYR 1 189 SER 1 190 -1 O TYR 1 189 N LEU 1 110 SHEET 1 AA2 4 ARG 1 177 ILE 1 180 0 SHEET 2 AA2 4 PHE 1 107 GLN 1 124 -1 N LEU 1 114 O ILE 1 180 SHEET 3 AA2 4 ILE 1 229 PRO 1 247 -1 O LYS 1 238 N GLU 1 115 SHEET 4 AA2 4 ARG 3 39 VAL 3 40 -1 O VAL 3 40 N ALA 1 244 SHEET 1 AA3 4 TYR 1 87 VAL 1 91 0 SHEET 2 AA3 4 THR 1 215 HIS 1 220 -1 O MET 1 218 N ALA 1 88 SHEET 3 AA3 4 THR 1 138 VAL 1 144 -1 N VAL 1 144 O THR 1 215 SHEET 4 AA3 4 SER 1 166 THR 1 170 -1 O VAL 1 167 N ILE 1 141 SHEET 1 AA4 2 VAL 2 13 LEU 2 18 0 SHEET 2 AA4 2 SER 2 21 GLN 2 26 -1 O ILE 2 23 N ILE 2 16 SHEET 1 AA5 5 VAL 2 32 VAL 2 33 0 SHEET 2 AA5 5 SER 2 199 MET 2 204 1 O THR 2 201 N VAL 2 32 SHEET 3 AA5 5 GLY 2 102 CYS 2 112 -1 N ILE 2 108 O ILE 2 202 SHEET 4 AA5 5 VAL 2 241 ASN 2 255 -1 O THR 2 244 N GLN 2 111 SHEET 5 AA5 5 TYR 2 64 THR 2 65 -1 N TYR 2 64 O ILE 2 247 SHEET 1 AA6 3 THR 2 54 PRO 2 56 0 SHEET 2 AA6 3 VAL 2 241 ASN 2 255 -1 O TYR 2 254 N GLN 2 55 SHEET 3 AA6 3 VAL 2 69 TRP 2 71 -1 N VAL 2 69 O ILE 2 243 SHEET 1 AA7 5 ARG 2 153 MET 2 154 0 SHEET 2 AA7 5 TRP 2 78 LYS 2 81 -1 N TRP 2 79 O ARG 2 153 SHEET 3 AA7 5 LEU 2 221 ASN 2 232 -1 O ILE 2 225 N TRP 2 78 SHEET 4 AA7 5 GLN 2 119 PRO 2 128 -1 N GLN 2 119 O ASN 2 232 SHEET 5 AA7 5 HIS 2 189 ASN 2 193 -1 O GLN 2 190 N VAL 2 124 SHEET 1 AA8 4 SER 3 51 VAL 3 52 0 SHEET 2 AA8 4 CYS 3 208 ALA 3 216 -1 O VAL 3 214 N SER 3 51 SHEET 3 AA8 4 TRP 3 110 PHE 3 120 -1 N LYS 3 115 O SER 3 215 SHEET 4 AA8 4 SER 3 163 SER 3 172 -1 O LEU 3 166 N LEU 3 116 SHEET 1 AA9 4 ILE 3 70 VAL 3 72 0 SHEET 2 AA9 4 CYS 3 208 ALA 3 216 -1 O ILE 3 210 N ILE 3 70 SHEET 3 AA9 4 TRP 3 110 PHE 3 120 -1 N LYS 3 115 O SER 3 215 SHEET 4 AA9 4 SER 3 221 VAL 3 222 -1 O SER 3 221 N SER 3 111 SHEET 1 AB1 4 GLN 3 81 PRO 3 86 0 SHEET 2 AB1 4 TYR 3 189 VAL 3 199 -1 O CYS 3 192 N PHE 3 83 SHEET 3 AB1 4 THR 3 127 SER 3 135 -1 N ALA 3 133 O THR 3 191 SHEET 4 AB1 4 HIS 3 153 ASP 3 157 -1 O TRP 3 156 N PHE 3 130 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 390 0 0 16 39 0 0 6 5396 3 0 61 END