HEADER OXIDOREDUCTASE 21-OCT-25 9T1O TITLE CRYSTAL STRUCTURE OF PHENYLALANINE HYDROXYLASE (PAH) WITH BELINOSTAT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENYLALANINE-4-HYDROXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PAH,PHE-4-MONOOXYGENASE; COMPND 5 EC: 1.14.16.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PAH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.CONDE-GIMENEZ,R.HURTADO-GUERRERO REVDAT 1 02-SEP-26 9T1O 0 JRNL AUTH M.CONDE-GIMENEZ,S.SALILLAS,M.GALIANA-CAMEO, JRNL AUTH 2 J.E.MARTINEZ-OLIVAN,A.MAHIA,M.LEDESMA,J.J.GALANO-FRUTOS, JRNL AUTH 3 R.MAITY,A.VELAZQUEZ-CAMPOY,M.D.DIAZ-DE-VILLEGAS, JRNL AUTH 4 R.HURTADO-GUERRERO,J.SANCHO JRNL TITL VARIANT-DEPENDENT PHARMACOLOGICAL RESCUE OF PHENYLALANINE JRNL TITL 2 HYDROXYLASE SUPPORTS A PRECISION THERAPEUTIC STRATEGY FOR JRNL TITL 3 PHENYLKETONURIA. JRNL REF BIOMED PHARMACOTHER V. 199 19371 2026 JRNL REFN ESSN 1950-6007 JRNL PMID 41990466 JRNL DOI 10.1016/J.BIOPHA.2026.119371 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 31846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1192 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2323 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2532 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.20000 REMARK 3 B22 (A**2) : 1.76000 REMARK 3 B33 (A**2) : -1.96000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.119 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.118 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.156 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2668 ; 0.017 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2410 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3594 ; 1.992 ; 1.663 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5589 ; 1.545 ; 1.570 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 310 ; 6.840 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 151 ;27.977 ;21.656 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 426 ;15.331 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;18.375 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 324 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2958 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 615 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1237 ; 2.539 ; 2.985 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1236 ; 2.540 ; 2.982 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1545 ; 3.536 ; 4.459 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1546 ; 3.535 ; 4.462 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1431 ; 3.902 ; 3.546 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1432 ; 3.901 ; 3.548 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2049 ; 5.835 ; 5.113 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3090 ; 7.493 ;35.688 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3062 ; 7.483 ;35.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 117 A 790 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3169 25.3082 9.4504 REMARK 3 T TENSOR REMARK 3 T11: 0.0520 T22: 0.0454 REMARK 3 T33: 0.0235 T12: 0.0104 REMARK 3 T13: -0.0012 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.0651 L22: 0.2397 REMARK 3 L33: 0.1392 L12: -0.0625 REMARK 3 L13: -0.1666 L23: 0.1138 REMARK 3 S TENSOR REMARK 3 S11: -0.0360 S12: -0.1601 S13: -0.0304 REMARK 3 S21: -0.0605 S22: 0.0223 S23: -0.0361 REMARK 3 S31: -0.0390 S32: -0.0031 S33: 0.0137 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9T1O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-OCT-25. REMARK 100 THE DEPOSITION ID IS D_1292151585. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96863 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33069 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 61.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.15500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PIPES PEG 2000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.98550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.98550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.82650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.05150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.82650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.05150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.98550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.82650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.05150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 61.98550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.82650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 54.05150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 61.98550 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 182 CD GLU A 182 OE1 0.090 REMARK 500 GLU A 305 CD GLU A 305 OE2 -0.072 REMARK 500 GLU A 330 CD GLU A 330 OE1 -0.099 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 145 CB - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 ARG A 176 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 243 CG - CD - NE ANGL. DEV. = -14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 270 159.34 -49.94 REMARK 500 THR A 328 -83.29 -124.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO A 281 -14.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 285 NE2 REMARK 620 2 HIS A 290 NE2 112.9 REMARK 620 3 GLU A 330 OE1 87.1 115.9 REMARK 620 4 5OG A 502 O3 134.1 109.5 89.7 REMARK 620 5 5OG A 502 O4 95.8 87.8 152.9 69.0 REMARK 620 N 1 2 3 4 DBREF 9T1O A 117 425 UNP P00439 PH4H_HUMAN 117 425 SEQRES 1 A 309 THR VAL PRO TRP PHE PRO ARG THR ILE GLN GLU LEU ASP SEQRES 2 A 309 ARG PHE ALA ASN GLN ILE LEU SER TYR GLY ALA GLU LEU SEQRES 3 A 309 ASP ALA ASP HIS PRO GLY PHE LYS ASP PRO VAL TYR ARG SEQRES 4 A 309 ALA ARG ARG LYS GLN PHE ALA ASP ILE ALA TYR ASN TYR SEQRES 5 A 309 ARG HIS GLY GLN PRO ILE PRO ARG VAL GLU TYR MET GLU SEQRES 6 A 309 GLU GLU LYS LYS THR TRP GLY THR VAL PHE LYS THR LEU SEQRES 7 A 309 LYS SER LEU TYR LYS THR HIS ALA CYS TYR GLU TYR ASN SEQRES 8 A 309 HIS ILE PHE PRO LEU LEU GLU LYS TYR CYS GLY PHE HIS SEQRES 9 A 309 GLU ASP ASN ILE PRO GLN LEU GLU ASP VAL SER GLN PHE SEQRES 10 A 309 LEU GLN THR CYS THR GLY PHE ARG LEU ARG PRO VAL ALA SEQRES 11 A 309 GLY LEU LEU SER SER ARG ASP PHE LEU GLY GLY LEU ALA SEQRES 12 A 309 PHE ARG VAL PHE HIS CYS THR GLN TYR ILE ARG HIS GLY SEQRES 13 A 309 SER LYS PRO MET TYR THR PRO GLU PRO ASP ILE CYS HIS SEQRES 14 A 309 GLU LEU LEU GLY HIS VAL PRO LEU PHE SER ASP ARG SER SEQRES 15 A 309 PHE ALA GLN PHE SER GLN GLU ILE GLY LEU ALA SER LEU SEQRES 16 A 309 GLY ALA PRO ASP GLU TYR ILE GLU LYS LEU ALA THR ILE SEQRES 17 A 309 TYR TRP PHE THR VAL GLU PHE GLY LEU CYS LYS GLN GLY SEQRES 18 A 309 ASP SER ILE LYS ALA TYR GLY ALA GLY LEU LEU SER SER SEQRES 19 A 309 PHE GLY GLU LEU GLN TYR CYS LEU SER GLU LYS PRO LYS SEQRES 20 A 309 LEU LEU PRO LEU GLU LEU GLU LYS THR ALA ILE GLN ASN SEQRES 21 A 309 TYR THR VAL THR GLU PHE GLN PRO LEU TYR TYR VAL ALA SEQRES 22 A 309 GLU SER PHE ASN ASP ALA LYS GLU LYS VAL ARG ASN PHE SEQRES 23 A 309 ALA ALA THR ILE PRO ARG PRO PHE SER VAL ARG TYR ASP SEQRES 24 A 309 PRO TYR THR GLN ARG ILE GLU VAL LEU ASP HET FE A 501 1 HET 5OG A 502 22 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET EDO A 506 4 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET EDO A 510 4 HET EDO A 511 4 HETNAM FE FE (III) ION HETNAM 5OG BELINOSTAT HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 FE FE 3+ FORMUL 3 5OG C15 H14 N2 O4 S FORMUL 4 EDO 9(C2 H6 O2) FORMUL 13 HOH *190(H2 O) HELIX 1 AA1 THR A 124 ARG A 130 5 7 HELIX 2 AA2 GLY A 139 ASP A 143 5 5 HELIX 3 AA3 ASP A 151 TYR A 168 1 18 HELIX 4 AA4 MET A 180 SER A 196 1 17 HELIX 5 AA5 LEU A 197 ALA A 202 1 6 HELIX 6 AA6 CYS A 203 CYS A 217 1 15 HELIX 7 AA7 GLN A 226 GLY A 239 1 14 HELIX 8 AA8 SER A 250 ALA A 259 1 10 HELIX 9 AA9 ASP A 282 HIS A 290 1 9 HELIX 10 AB1 HIS A 290 SER A 295 1 6 HELIX 11 AB2 ASP A 296 LEU A 311 1 16 HELIX 12 AB3 PRO A 314 THR A 328 1 15 HELIX 13 AB4 GLY A 344 SER A 349 1 6 HELIX 14 AB5 SER A 350 CYS A 357 1 8 HELIX 15 AB6 GLU A 368 ALA A 373 1 6 HELIX 16 AB7 SER A 391 ILE A 406 1 16 SHEET 1 AA1 2 ILE A 135 LEU A 136 0 SHEET 2 AA1 2 LEU A 248 LEU A 249 -1 O LEU A 248 N LEU A 136 SHEET 1 AA2 2 ARG A 241 PRO A 244 0 SHEET 2 AA2 2 VAL A 262 CYS A 265 1 O PHE A 263 N ARG A 241 SHEET 1 AA3 4 SER A 339 ALA A 342 0 SHEET 2 AA3 4 LEU A 333 GLN A 336 -1 N GLN A 336 O SER A 339 SHEET 3 AA3 4 LEU A 385 ALA A 389 1 O ALA A 389 N LEU A 333 SHEET 4 AA3 4 LYS A 363 PRO A 366 1 N LEU A 365 O VAL A 388 SHEET 1 AA4 2 SER A 411 ASP A 415 0 SHEET 2 AA4 2 ARG A 420 LEU A 424 -1 O ARG A 420 N ASP A 415 LINK NE2 HIS A 285 FE FE A 501 1555 1555 1.93 LINK NE2 HIS A 290 FE FE A 501 1555 1555 2.00 LINK OE1 GLU A 330 FE FE A 501 1555 1555 2.18 LINK FE FE A 501 O3 5OG A 502 1555 1555 1.95 LINK FE FE A 501 O4 5OG A 502 1555 1555 2.69 CRYST1 65.653 108.103 123.971 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015232 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009250 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008066 0.00000 CONECT 1406 2537 CONECT 1445 2537 CONECT 1769 2537 CONECT 2537 1406 1445 1769 2538 CONECT 2537 2541 CONECT 2538 2537 2539 CONECT 2539 2538 2540 2542 CONECT 2540 2539 2541 CONECT 2541 2537 2540 CONECT 2542 2539 2543 CONECT 2543 2542 2544 CONECT 2544 2543 2545 2546 CONECT 2545 2544 2549 CONECT 2546 2544 2547 CONECT 2547 2546 2548 CONECT 2548 2547 2549 CONECT 2549 2545 2548 2550 CONECT 2550 2549 2551 2552 2553 CONECT 2551 2550 CONECT 2552 2550 CONECT 2553 2550 2554 CONECT 2554 2553 2555 2559 CONECT 2555 2554 2556 CONECT 2556 2555 2557 CONECT 2557 2556 2558 CONECT 2558 2557 2559 CONECT 2559 2554 2558 CONECT 2560 2561 2562 CONECT 2561 2560 CONECT 2562 2560 2563 CONECT 2563 2562 CONECT 2564 2565 2566 CONECT 2565 2564 CONECT 2566 2564 2567 CONECT 2567 2566 CONECT 2568 2569 2570 CONECT 2569 2568 CONECT 2570 2568 2571 CONECT 2571 2570 CONECT 2572 2573 2574 CONECT 2573 2572 CONECT 2574 2572 2575 CONECT 2575 2574 CONECT 2576 2577 2578 CONECT 2577 2576 CONECT 2578 2576 2579 CONECT 2579 2578 CONECT 2580 2581 2582 CONECT 2581 2580 CONECT 2582 2580 2583 CONECT 2583 2582 CONECT 2584 2585 2586 CONECT 2585 2584 CONECT 2586 2584 2587 CONECT 2587 2586 CONECT 2588 2589 2590 CONECT 2589 2588 CONECT 2590 2588 2591 CONECT 2591 2590 CONECT 2592 2593 2594 CONECT 2593 2592 CONECT 2594 2592 2595 CONECT 2595 2594 MASTER 362 0 11 16 10 0 0 6 2781 1 63 24 END