data_9T8F # _entry.id 9T8F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9T8F pdb_00009t8f 10.2210/pdb9t8f/pdb WWPDB D_1292150630 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-07-29 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9T8F _pdbx_database_status.recvd_initial_deposition_date 2025-11-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email cftornero@cib.csic.es _pdbx_contact_author.name_first Carlos _pdbx_contact_author.name_last Fernandez-Tornero _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-5097-731X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Darriere, T.' 1 0000-0002-1655-525X 'Ruiz, F.M.' 2 0000-0002-0385-7777 'Cuevas, C.' 3 ? 'Fernandez-Tornero, C.' 4 0000-0001-5097-731X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The structures of ecteinascidins bound to DNA shed light on their mechanism of action' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Darriere, T.' 1 0000-0002-1655-525X primary 'Ruiz, F.M.' 2 0000-0002-0385-7777 primary 'Martinez-Diez, M.' 3 ? primary 'Lima Ribeiro, M.' 4 ? primary 'Cuevas, C.' 5 ? primary 'Fernandez-Tornero, C.' 6 0000-0001-5097-731X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*AP*TP*GP*CP*AP*TP*CP*G)-3') ; 3045.004 8 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 4 ? ? ? ? 3 non-polymer syn 'ECTEINASCIDIN 743' 761.837 5 ? ? ? ? 4 water nat water 18.015 8 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DA)(DT)(DG)(DC)(DA)(DT)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGATGCATCG _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'ECTEINASCIDIN 743' ECT 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DA n 1 4 DT n 1 5 DG n 1 6 DC n 1 7 DA n 1 8 DT n 1 9 DC n 1 10 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'DNA molecule' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 2853804 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 ECT non-polymer . 'ECTEINASCIDIN 743' trabectedin 'C39 H43 N3 O11 S' 761.837 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DC 9 9 9 DC DC A . n A 1 10 DG 10 10 10 DG DG A . n B 1 1 DC 1 1 1 DC DC B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DA 3 3 3 DA DA B . n B 1 4 DT 4 4 4 DT DT B . n B 1 5 DG 5 5 5 DG DG B . n B 1 6 DC 6 6 6 DC DC B . n B 1 7 DA 7 7 7 DA DA B . n B 1 8 DT 8 8 8 DT DT B . n B 1 9 DC 9 9 9 DC DC B . n B 1 10 DG 10 10 10 DG DG B . n C 1 1 DC 1 1 1 DC DC C . n C 1 2 DG 2 2 2 DG DG C . n C 1 3 DA 3 3 3 DA DA C . n C 1 4 DT 4 4 4 DT DT C . n C 1 5 DG 5 5 5 DG DG C . n C 1 6 DC 6 6 6 DC DC C . n C 1 7 DA 7 7 7 DA DA C . n C 1 8 DT 8 8 8 DT DT C . n C 1 9 DC 9 9 9 DC DC C . n C 1 10 DG 10 10 10 DG DG C . n D 1 1 DC 1 1 1 DC DC D . n D 1 2 DG 2 2 2 DG DG D . n D 1 3 DA 3 3 3 DA DA D . n D 1 4 DT 4 4 4 DT DT D . n D 1 5 DG 5 5 5 DG DG D . n D 1 6 DC 6 6 6 DC DC D . n D 1 7 DA 7 7 7 DA DA D . n D 1 8 DT 8 8 8 DT DT D . n D 1 9 DC 9 9 9 DC DC D . n D 1 10 DG 10 10 10 DG DG D . n E 1 1 DC 1 1 1 DC DC E . n E 1 2 DG 2 2 2 DG DG E . n E 1 3 DA 3 3 3 DA DA E . n E 1 4 DT 4 4 4 DT DT E . n E 1 5 DG 5 5 5 DG DG E . n E 1 6 DC 6 6 6 DC DC E . n E 1 7 DA 7 7 7 DA DA E . n E 1 8 DT 8 8 8 DT DT E . n E 1 9 DC 9 9 9 DC DC E . n E 1 10 DG 10 10 10 DG DG E . n F 1 1 DC 1 1 1 DC DC F . n F 1 2 DG 2 2 2 DG DG F . n F 1 3 DA 3 3 3 DA DA F . n F 1 4 DT 4 4 4 DT DT F . n F 1 5 DG 5 5 5 DG DG F . n F 1 6 DC 6 6 6 DC DC F . n F 1 7 DA 7 7 7 DA DA F . n F 1 8 DT 8 8 8 DT DT F . n F 1 9 DC 9 9 9 DC DC F . n F 1 10 DG 10 10 10 DG DG F . n G 1 1 DC 1 1 1 DC DC G . n G 1 2 DG 2 2 2 DG DG G . n G 1 3 DA 3 3 3 DA DA G . n G 1 4 DT 4 4 4 DT DT G . n G 1 5 DG 5 5 5 DG DG G . n G 1 6 DC 6 6 6 DC DC G . n G 1 7 DA 7 7 7 DA DA G . n G 1 8 DT 8 8 8 DT DT G . n G 1 9 DC 9 9 9 DC DC G . n G 1 10 DG 10 10 10 DG DG G . n H 1 1 DC 1 1 1 DC DC H . n H 1 2 DG 2 2 2 DG DG H . n H 1 3 DA 3 3 3 DA DA H . n H 1 4 DT 4 4 4 DT DT H . n H 1 5 DG 5 5 5 DG DG H . n H 1 6 DC 6 6 6 DC DC H . n H 1 7 DA 7 7 7 DA DA H . n H 1 8 DT 8 8 8 DT DT H . n H 1 9 DC 9 9 9 DC DC H . n H 1 10 DG 10 10 10 DG DG H . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ECT _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ECT _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 K 1 101 1 K K A . J 2 K 1 102 2 K K A . K 3 ECT 1 101 101 ECT ECT B . L 3 ECT 1 101 101 ECT ECT D . M 2 K 1 101 3 K K E . N 3 ECT 1 101 101 ECT ECT F . O 3 ECT 1 102 102 ECT ECT F . P 3 ECT 1 101 101 ECT ECT G . Q 2 K 1 102 4 K K G . R 4 HOH 1 201 6 HOH HOH A . R 4 HOH 2 202 4 HOH HOH A . R 4 HOH 3 203 2 HOH HOH A . S 4 HOH 1 201 5 HOH HOH B . S 4 HOH 2 202 7 HOH HOH B . T 4 HOH 1 201 8 HOH HOH E . U 4 HOH 1 201 3 HOH HOH F . V 4 HOH 1 101 1 HOH HOH H . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? '5.8.0430 (refmacat 0.4.105)' ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 90 _cell.angle_beta_esd ? _cell.angle_gamma 90 _cell.angle_gamma_esd ? _cell.entry_id 9T8F _cell.details ? _cell.formula_units_Z ? _cell.length_a 26.078 _cell.length_a_esd ? _cell.length_b 40.942 _cell.length_b_esd ? _cell.length_c 234.506 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 32 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9T8F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9T8F _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.35 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'MPD, potassium chloride, lithium chloride, spermine' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 295 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-11-24 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALBA BEAMLINE XALOC' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9793 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline XALOC _diffrn_source.pdbx_synchrotron_site ALBA # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9T8F _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 25.9 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10587 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.19 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.8 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.085 _reflns.pdbx_Rpim_I_all 0.043 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star 1 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.6 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 4654 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.345 _reflns_shell.pdbx_Rpim_I_all 0.691 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.662 _reflns_shell.pdbx_CC_star 0.892 _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.53 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.150 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 6.303 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 1.184 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] -7.487 _refine.B_iso_max ? _refine.B_iso_mean 72.766 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.960 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9T8F _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.400 _refine.ls_d_res_low 25.9 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9980 _refine.ls_number_reflns_R_free 553 _refine.ls_number_reflns_R_work 9980 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.528 _refine.ls_percent_reflns_R_free 5.250 _refine.ls_R_factor_all 0.229 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2856 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2263 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.491 _refine.pdbx_overall_ESU_R_Free 0.304 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 17.397 _refine.overall_SU_ML 0.348 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1616 _refine_hist.pdbx_number_atoms_ligand 269 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 1893 _refine_hist.d_res_high 2.400 _refine_hist.d_res_low 25.9 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.011 2118 ? r_bond_refined_d ? ? ? 'X-RAY DIFFRACTION' ? 0.002 0.017 993 ? r_bond_other_d ? ? ? 'X-RAY DIFFRACTION' ? 1.972 1.822 3271 ? r_angle_refined_deg ? ? ? 'X-RAY DIFFRACTION' ? 0.490 1.557 2387 ? r_angle_other_deg ? ? ? 'X-RAY DIFFRACTION' ? 22.133 5.000 35 ? r_dihedral_angle_2_deg ? ? ? 'X-RAY DIFFRACTION' ? 3.828 5.000 64 ? r_dihedral_angle_other_2_deg ? ? ? 'X-RAY DIFFRACTION' ? 0.073 0.200 357 ? r_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.012 0.020 1218 ? r_gen_planes_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 303 ? r_gen_planes_other ? ? ? 'X-RAY DIFFRACTION' ? 0.244 0.200 404 ? r_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.250 0.200 1237 ? r_symmetry_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? 0.263 0.200 848 ? r_nbtor_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.092 0.200 645 ? r_symmetry_nbtor_other ? ? ? 'X-RAY DIFFRACTION' ? 0.186 0.200 59 ? r_xyhbond_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.090 0.200 5 ? r_symmetry_xyhbond_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? 0.160 0.200 5 ? r_metal_ion_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.163 0.200 25 ? r_symmetry_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.265 0.200 24 ? r_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? 0.284 0.200 2 ? r_symmetry_xyhbond_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 6.733 7.514 2118 ? r_scbond_it ? ? ? 'X-RAY DIFFRACTION' ? 6.733 7.514 2118 ? r_scbond_other ? ? ? 'X-RAY DIFFRACTION' ? 10.095 13.683 3271 ? r_scangle_it ? ? ? 'X-RAY DIFFRACTION' ? 10.093 13.681 3272 ? r_scangle_other ? ? ? 'X-RAY DIFFRACTION' ? 14.249 96.734 3313 ? r_lrange_it ? ? ? 'X-RAY DIFFRACTION' ? 14.247 96.715 3314 ? r_lrange_other ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.400 2.462 . . 42 682 98.9071 . . . . 0.479 . . . . . . . . . . . . . . . 0.533 'X-RAY DIFFRACTION' 2.462 2.529 . . 35 710 99.7323 . . . . 0.439 . . . . . . . . . . . . . . . 0.459 'X-RAY DIFFRACTION' 2.529 2.602 . . 38 697 99.7286 . . . . 0.474 . . . . . . . . . . . . . . . 0.573 'X-RAY DIFFRACTION' 2.602 2.682 . . 33 657 99.8553 . . . . 0.471 . . . . . . . . . . . . . . . 0.470 'X-RAY DIFFRACTION' 2.682 2.770 . . 41 625 99.7006 . . . . 0.459 . . . . . . . . . . . . . . . 0.457 'X-RAY DIFFRACTION' 2.770 2.866 . . 34 643 99.8525 . . . . 0.399 . . . . . . . . . . . . . . . 0.536 'X-RAY DIFFRACTION' 2.866 2.974 . . 30 592 99.6795 . . . . 0.349 . . . . . . . . . . . . . . . 0.384 'X-RAY DIFFRACTION' 2.974 3.095 . . 33 570 99.6694 . . . . 0.233 . . . . . . . . . . . . . . . 0.393 'X-RAY DIFFRACTION' 3.095 3.232 . . 36 579 99.5146 . . . . 0.191 . . . . . . . . . . . . . . . 0.182 'X-RAY DIFFRACTION' 3.232 3.388 . . 28 526 99.1055 . . . . 0.196 . . . . . . . . . . . . . . . 0.303 'X-RAY DIFFRACTION' 3.388 3.570 . . 28 504 99.6255 . . . . 0.184 . . . . . . . . . . . . . . . 0.233 'X-RAY DIFFRACTION' 3.570 3.785 . . 27 512 99.6303 . . . . 0.247 . . . . . . . . . . . . . . . 0.232 'X-RAY DIFFRACTION' 3.785 4.044 . . 27 454 99.7925 . . . . 0.245 . . . . . . . . . . . . . . . 0.346 'X-RAY DIFFRACTION' 4.044 4.364 . . 26 449 100.0000 . . . . 0.208 . . . . . . . . . . . . . . . 0.396 'X-RAY DIFFRACTION' 4.364 4.775 . . 25 386 100.0000 . . . . 0.187 . . . . . . . . . . . . . . . 0.303 'X-RAY DIFFRACTION' 4.775 5.329 . . 19 384 100.0000 . . . . 0.175 . . . . . . . . . . . . . . . 0.285 'X-RAY DIFFRACTION' 5.329 6.136 . . 18 327 99.4236 . . . . 0.153 . . . . . . . . . . . . . . . 0.171 'X-RAY DIFFRACTION' 6.136 7.472 . . 9 290 99.0066 . . . . 0.189 . . . . . . . . . . . . . . . 0.278 'X-RAY DIFFRACTION' 7.472 10.390 . . 12 246 100.0000 . . . . 0.182 . . . . . . . . . . . . . . . 0.251 # _struct.entry_id 9T8F _struct.title 'Crystal structure of trabectedin bound to 10-mer duplex DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9T8F _struct_keywords.text 'ecteinascidin, DNA duplex, covalent bond, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 2 ? J N N 2 ? K N N 3 ? L N N 3 ? M N N 2 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 2 ? R N N 4 ? S N N 4 ? T N N 4 ? U N N 4 ? V N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9T8F _struct_ref.pdbx_db_accession 9T8F _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9T8F A 1 ? 10 ? 9T8F 1 ? 10 ? 1 10 2 1 9T8F B 1 ? 10 ? 9T8F 1 ? 10 ? 1 10 3 1 9T8F C 1 ? 10 ? 9T8F 1 ? 10 ? 1 10 4 1 9T8F D 1 ? 10 ? 9T8F 1 ? 10 ? 1 10 5 1 9T8F E 1 ? 10 ? 9T8F 1 ? 10 ? 1 10 6 1 9T8F F 1 ? 10 ? 9T8F 1 ? 10 ? 1 10 7 1 9T8F G 1 ? 10 ? 9T8F 1 ? 10 ? 1 10 8 1 9T8F H 1 ? 10 ? 9T8F 1 ? 10 ? 1 10 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 author_defined_assembly ? tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,I,J,K,L,R,S 2 1 E,F,G,H,M,N,O,P,Q,T,U,V # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B DG 5 N2 ? ? ? 1_555 K ECT . C40 ? ? B DG 5 B ECT 101 1_555 ? ? ? ? ? ? ? 1.455 ? ? covale2 covale one ? D DG 5 N2 ? ? ? 1_555 L ECT . C40 ? ? D DG 5 D ECT 101 1_555 ? ? ? ? ? ? ? 1.471 ? ? covale3 covale one ? F DG 2 N2 ? ? ? 1_555 O ECT . C40 ? ? F DG 2 F ECT 102 1_555 ? ? ? ? ? ? ? 1.460 ? ? covale4 covale one ? F DG 5 N2 ? ? ? 1_555 N ECT . C40 ? ? F DG 5 F ECT 101 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale5 covale one ? G DG 5 N2 ? ? ? 1_555 P ECT . C40 ? ? G DG 5 G ECT 101 1_555 ? ? ? ? ? ? ? 1.466 ? ? metalc1 metalc ? ? A DT 8 O2 ? ? ? 1_555 I K . K ? ? A DT 8 A K 101 1_555 ? ? ? ? ? ? ? 2.780 ? ? metalc2 metalc ? ? A DG 10 "O3'" ? ? ? 1_555 J K . K ? ? A DG 10 A K 102 1_555 ? ? ? ? ? ? ? 3.184 ? ? metalc3 metalc ? ? I K . K ? ? ? 1_555 B DT 4 O2 ? ? A K 101 B DT 4 1_555 ? ? ? ? ? ? ? 3.130 ? ? metalc4 metalc ? ? I K . K ? ? ? 1_555 S HOH . O ? ? A K 101 B HOH 202 1_555 ? ? ? ? ? ? ? 3.475 ? ? metalc5 metalc ? ? I K . K ? ? ? 1_555 C DG 10 "O3'" ? ? A K 101 C DG 10 1_555 ? ? ? ? ? ? ? 2.618 ? ? metalc6 metalc ? ? J K . K ? ? ? 1_555 C DT 8 O2 ? ? A K 102 C DT 8 1_555 ? ? ? ? ? ? ? 2.781 ? ? metalc7 metalc ? ? J K . K ? ? ? 1_555 D DT 4 O2 ? ? A K 102 D DT 4 1_555 ? ? ? ? ? ? ? 2.495 ? ? metalc8 metalc ? ? E DT 4 O2 ? ? ? 1_555 M K . K ? ? E DT 4 E K 101 1_555 ? ? ? ? ? ? ? 2.821 ? ? metalc9 metalc ? ? M K . K ? ? ? 1_555 F DT 8 O2 ? ? E K 101 F DT 8 1_555 ? ? ? ? ? ? ? 2.681 ? ? metalc10 metalc ? ? M K . K ? ? ? 1_555 H DG 10 "O3'" ? ? E K 101 H DG 10 1_555 ? ? ? ? ? ? ? 3.340 ? ? metalc11 metalc ? ? G DT 4 O2 ? ? ? 1_555 Q K . K ? ? G DT 4 G K 102 1_555 ? ? ? ? ? ? ? 3.382 ? ? metalc12 metalc ? ? Q K . K ? ? ? 1_555 H DT 8 O2 ? ? G K 102 H DT 8 1_555 ? ? ? ? ? ? ? 3.353 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 2 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 2 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 2 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 3 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 3 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 4 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 4 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 7 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 7 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 8 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 8 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 9 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 9 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 9 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 10 N2 ? ? ? 1_555 D DG 2 N3 ? ? A DG 10 D DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog28 hydrog ? ? A DG 10 N3 ? ? ? 1_555 D DG 2 N2 ? ? A DG 10 D DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog29 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DG 10 N3 ? ? B DG 2 C DG 10 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog30 hydrog ? ? B DG 2 N3 ? ? ? 1_555 C DG 10 N2 ? ? B DG 2 C DG 10 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog31 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 10 N1 ? ? C DC 1 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 10 O6 ? ? C DC 1 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 10 N2 ? ? C DC 1 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 9 N3 ? ? C DG 2 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 9 O2 ? ? C DG 2 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 9 N4 ? ? C DG 2 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 3 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 3 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT 4 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT 4 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 6 N3 ? ? C DG 5 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 6 O2 ? ? C DG 5 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 6 N4 ? ? C DG 5 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 6 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 6 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 6 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 7 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 7 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 8 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 3 N6 ? ? C DT 8 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DC 9 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 9 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DC 9 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 9 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 9 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DG 10 N1 ? ? ? 1_555 D DC 1 N3 ? ? C DG 10 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C DG 10 N2 ? ? ? 1_555 D DC 1 O2 ? ? C DG 10 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DG 10 O6 ? ? ? 1_555 D DC 1 N4 ? ? C DG 10 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DC 1 N3 ? ? ? 1_555 F DG 10 N1 ? ? E DC 1 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DC 1 N4 ? ? ? 1_555 F DG 10 O6 ? ? E DC 1 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DC 1 O2 ? ? ? 1_555 F DG 10 N2 ? ? E DC 1 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DG 2 N1 ? ? ? 1_555 F DC 9 N3 ? ? E DG 2 F DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? E DG 2 N2 ? ? ? 1_555 F DC 9 O2 ? ? E DG 2 F DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E DG 2 O6 ? ? ? 1_555 F DC 9 N4 ? ? E DG 2 F DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E DG 2 N2 ? ? ? 1_555 H DG 10 N3 ? ? E DG 2 H DG 10 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog64 hydrog ? ? E DG 2 N3 ? ? ? 1_555 H DG 10 N2 ? ? E DG 2 H DG 10 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog65 hydrog ? ? E DA 3 N1 ? ? ? 1_555 F DT 8 N3 ? ? E DA 3 F DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? E DA 3 N6 ? ? ? 1_555 F DT 8 O4 ? ? E DA 3 F DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? E DT 4 N3 ? ? ? 1_555 F DA 7 N1 ? ? E DT 4 F DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? E DT 4 O4 ? ? ? 1_555 F DA 7 N6 ? ? E DT 4 F DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? E DG 5 N1 ? ? ? 1_555 F DC 6 N3 ? ? E DG 5 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? E DG 5 N2 ? ? ? 1_555 F DC 6 O2 ? ? E DG 5 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? E DG 5 O6 ? ? ? 1_555 F DC 6 N4 ? ? E DG 5 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? E DC 6 N3 ? ? ? 1_555 F DG 5 N1 ? ? E DC 6 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? E DC 6 N4 ? ? ? 1_555 F DG 5 O6 ? ? E DC 6 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? E DC 6 O2 ? ? ? 1_555 F DG 5 N2 ? ? E DC 6 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? E DA 7 N1 ? ? ? 1_555 F DT 4 N3 ? ? E DA 7 F DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? E DA 7 N6 ? ? ? 1_555 F DT 4 O4 ? ? E DA 7 F DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? E DT 8 N3 ? ? ? 1_555 F DA 3 N1 ? ? E DT 8 F DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? E DT 8 O4 ? ? ? 1_555 F DA 3 N6 ? ? E DT 8 F DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? E DC 9 N3 ? ? ? 1_555 F DG 2 N1 ? ? E DC 9 F DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? E DC 9 N4 ? ? ? 1_555 F DG 2 O6 ? ? E DC 9 F DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? E DC 9 O2 ? ? ? 1_555 F DG 2 N2 ? ? E DC 9 F DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? E DG 10 N1 ? ? ? 1_555 F DC 1 N3 ? ? E DG 10 F DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? E DG 10 N2 ? ? ? 1_555 F DC 1 O2 ? ? E DG 10 F DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? E DG 10 O6 ? ? ? 1_555 F DC 1 N4 ? ? E DG 10 F DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? F DG 10 N2 ? ? ? 1_555 G DG 2 N3 ? ? F DG 10 G DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog86 hydrog ? ? F DG 10 N3 ? ? ? 1_555 G DG 2 N2 ? ? F DG 10 G DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog87 hydrog ? ? G DC 1 N3 ? ? ? 1_555 H DG 10 N1 ? ? G DC 1 H DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? G DC 1 N4 ? ? ? 1_555 H DG 10 O6 ? ? G DC 1 H DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? G DC 1 O2 ? ? ? 1_555 H DG 10 N2 ? ? G DC 1 H DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? G DG 2 N1 ? ? ? 1_555 H DC 9 N3 ? ? G DG 2 H DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? G DG 2 N2 ? ? ? 1_555 H DC 9 O2 ? ? G DG 2 H DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? G DG 2 O6 ? ? ? 1_555 H DC 9 N4 ? ? G DG 2 H DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? G DA 3 N1 ? ? ? 1_555 H DT 8 N3 ? ? G DA 3 H DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? G DA 3 N6 ? ? ? 1_555 H DT 8 O4 ? ? G DA 3 H DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? G DT 4 N3 ? ? ? 1_555 H DA 7 N1 ? ? G DT 4 H DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? G DT 4 O4 ? ? ? 1_555 H DA 7 N6 ? ? G DT 4 H DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? G DG 5 N1 ? ? ? 1_555 H DC 6 N3 ? ? G DG 5 H DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? G DG 5 N2 ? ? ? 1_555 H DC 6 O2 ? ? G DG 5 H DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? G DG 5 O6 ? ? ? 1_555 H DC 6 N4 ? ? G DG 5 H DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? G DC 6 N3 ? ? ? 1_555 H DG 5 N1 ? ? G DC 6 H DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? G DC 6 N4 ? ? ? 1_555 H DG 5 O6 ? ? G DC 6 H DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? G DC 6 O2 ? ? ? 1_555 H DG 5 N2 ? ? G DC 6 H DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? G DA 7 N1 ? ? ? 1_555 H DT 4 N3 ? ? G DA 7 H DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? G DA 7 N6 ? ? ? 1_555 H DT 4 O4 ? ? G DA 7 H DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? G DT 8 N3 ? ? ? 1_555 H DA 3 N1 ? ? G DT 8 H DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? G DT 8 O4 ? ? ? 1_555 H DA 3 N6 ? ? G DT 8 H DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? G DC 9 N3 ? ? ? 1_555 H DG 2 N1 ? ? G DC 9 H DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? G DC 9 N4 ? ? ? 1_555 H DG 2 O6 ? ? G DC 9 H DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? G DC 9 O2 ? ? ? 1_555 H DG 2 N2 ? ? G DC 9 H DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? G DG 10 N1 ? ? ? 1_555 H DC 1 N3 ? ? G DG 10 H DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? G DG 10 N2 ? ? ? 1_555 H DC 1 O2 ? ? G DG 10 H DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? G DG 10 O6 ? ? ? 1_555 H DC 1 N4 ? ? G DG 10 H DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2 ? A DT 8 ? A DT 8 ? 1_555 K ? I K . ? A K 101 ? 1_555 O2 ? B DT 4 ? B DT 4 ? 1_555 77.8 ? 2 O2 ? A DT 8 ? A DT 8 ? 1_555 K ? I K . ? A K 101 ? 1_555 O ? S HOH . ? B HOH 202 ? 1_555 169.4 ? 3 O2 ? B DT 4 ? B DT 4 ? 1_555 K ? I K . ? A K 101 ? 1_555 O ? S HOH . ? B HOH 202 ? 1_555 105.0 ? 4 O2 ? A DT 8 ? A DT 8 ? 1_555 K ? I K . ? A K 101 ? 1_555 "O3'" ? C DG 10 ? C DG 10 ? 1_555 80.0 ? 5 O2 ? B DT 4 ? B DT 4 ? 1_555 K ? I K . ? A K 101 ? 1_555 "O3'" ? C DG 10 ? C DG 10 ? 1_555 87.2 ? 6 O ? S HOH . ? B HOH 202 ? 1_555 K ? I K . ? A K 101 ? 1_555 "O3'" ? C DG 10 ? C DG 10 ? 1_555 89.9 ? 7 "O3'" ? A DG 10 ? A DG 10 ? 1_555 K ? J K . ? A K 102 ? 1_555 O2 ? C DT 8 ? C DT 8 ? 1_555 57.7 ? 8 "O3'" ? A DG 10 ? A DG 10 ? 1_555 K ? J K . ? A K 102 ? 1_555 O2 ? D DT 4 ? D DT 4 ? 1_555 93.1 ? 9 O2 ? C DT 8 ? C DT 8 ? 1_555 K ? J K . ? A K 102 ? 1_555 O2 ? D DT 4 ? D DT 4 ? 1_555 94.8 ? 10 O2 ? E DT 4 ? E DT 4 ? 1_555 K ? M K . ? E K 101 ? 1_555 O2 ? F DT 8 ? F DT 8 ? 1_555 87.8 ? 11 O2 ? E DT 4 ? E DT 4 ? 1_555 K ? M K . ? E K 101 ? 1_555 "O3'" ? H DG 10 ? H DG 10 ? 1_555 95.0 ? 12 O2 ? F DT 8 ? F DT 8 ? 1_555 K ? M K . ? E K 101 ? 1_555 "O3'" ? H DG 10 ? H DG 10 ? 1_555 59.9 ? 13 O2 ? G DT 4 ? G DT 4 ? 1_555 K ? Q K . ? G K 102 ? 1_555 O2 ? H DT 8 ? H DT 8 ? 1_555 64.8 ? # _pdbx_entry_details.entry_id 9T8F _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H21 H DG 5 ? ? O5 G ECT 101 ? ? 1.46 2 1 O2 G DC 9 ? ? H22 H DG 2 ? ? 1.50 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OP1 _pdbx_validate_symm_contact.auth_asym_id_1 E _pdbx_validate_symm_contact.auth_comp_id_1 DA _pdbx_validate_symm_contact.auth_seq_id_1 7 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 H39 _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 ECT _pdbx_validate_symm_contact.auth_seq_id_2 101 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_545 _pdbx_validate_symm_contact.dist 1.60 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C2 D DG 5 ? ? N2 D DG 5 ? ? 1.443 1.341 0.102 0.010 N 2 1 C2 F DG 2 ? ? N2 F DG 2 ? ? 1.404 1.341 0.063 0.010 N 3 1 C2 G DG 5 ? ? N2 G DG 5 ? ? 1.438 1.341 0.097 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 101.94 104.50 -2.56 0.40 N 2 1 "C1'" A DT 4 ? ? "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? 104.09 110.10 -6.01 1.00 N 3 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 111.97 108.30 3.67 0.30 N 4 1 "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 110.22 108.30 1.92 0.30 N 5 1 "O3'" D DA 3 ? ? P D DT 4 ? ? OP1 D DT 4 ? ? 118.06 110.50 7.56 1.10 Y 6 1 N1 D DG 5 ? ? C2 D DG 5 ? ? N2 D DG 5 ? ? 122.35 116.20 6.15 0.90 N 7 1 "O4'" D DG 10 ? ? "C1'" D DG 10 ? ? N9 D DG 10 ? ? 110.60 108.30 2.30 0.30 N 8 1 "O4'" E DG 5 ? ? "C1'" E DG 5 ? ? N9 E DG 5 ? ? 111.54 108.30 3.24 0.30 N 9 1 N1 F DG 2 ? ? C2 F DG 2 ? ? N2 F DG 2 ? ? 122.66 116.20 6.46 0.90 N 10 1 N3 F DG 2 ? ? C2 F DG 2 ? ? N2 F DG 2 ? ? 115.18 119.90 -4.72 0.70 N 11 1 N3 F DG 5 ? ? C2 F DG 5 ? ? N2 F DG 5 ? ? 115.55 119.90 -4.35 0.70 N 12 1 "O3'" F DG 5 ? ? P F DC 6 ? ? OP1 F DC 6 ? ? 117.84 110.50 7.34 1.10 Y 13 1 "O4'" G DC 1 ? ? "C1'" G DC 1 ? ? N1 G DC 1 ? ? 103.58 108.00 -4.42 0.70 N 14 1 "O4'" G DG 5 ? ? "C1'" G DG 5 ? ? N9 G DG 5 ? ? 112.54 108.30 4.24 0.30 N 15 1 "O3'" G DC 6 ? ? P G DA 7 ? ? "O5'" G DA 7 ? ? 91.46 104.00 -12.54 1.90 Y 16 1 "O4'" H DT 4 ? ? "C1'" H DT 4 ? ? N1 H DT 4 ? ? 110.31 108.30 2.01 0.30 N 17 1 "O4'" H DA 7 ? ? "C1'" H DA 7 ? ? N9 H DA 7 ? ? 110.95 108.30 2.65 0.30 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 ECT C1 C N N 144 ECT C2 C N R 145 ECT C3 C Y N 146 ECT C4 C Y N 147 ECT O5 O N N 148 ECT C6 C N N 149 ECT O7 O N N 150 ECT C8 C Y N 151 ECT C9 C Y N 152 ECT C10 C N N 153 ECT C14 C Y N 154 ECT O15 O N N 155 ECT C16 C N N 156 ECT O17 O N N 157 ECT C18 C N N 158 ECT C19 C Y N 159 ECT C20 C N R 160 ECT C21 C N R 161 ECT N22 N N N 162 ECT S S N N 163 ECT C23 C N N 164 ECT C24 C N R 165 ECT C25 C N N 166 ECT O26 O N N 167 ECT O27 O N N 168 ECT C28 C Y N 169 ECT C29 C Y N 170 ECT C30 C Y N 171 ECT O31 O N N 172 ECT C32 C N N 173 ECT C33 C Y N 174 ECT O34 O N N 175 ECT C35 C Y N 176 ECT C36 C Y N 177 ECT C37 C N N 178 ECT C38 C N N 179 ECT N39 N N N 180 ECT C40 C N S 181 ECT O40 O N N 182 ECT C41 C N S 183 ECT N42 N N N 184 ECT C43 C N N 185 ECT C44 C N R 186 ECT C45 C Y N 187 ECT C46 C Y N 188 ECT O47 O N N 189 ECT C47 C Y N 190 ECT O48 O N N 191 ECT C49 C N N 192 ECT C50 C Y N 193 ECT C51 C N N 194 ECT C52 C Y N 195 ECT C53 C Y N 196 ECT C54 C N N 197 ECT H11A H N N 198 ECT H12A H N N 199 ECT H2 H N N 200 ECT H61 H N N 201 ECT H62 H N N 202 ECT H11 H N N 203 ECT H12 H N N 204 ECT H13 H N N 205 ECT H181 H N N 206 ECT H182 H N N 207 ECT H183 H N N 208 ECT H20 H N N 209 ECT H21 H N N 210 ECT H231 H N N 211 ECT H232 H N N 212 ECT H29 H N N 213 ECT H321 H N N 214 ECT H322 H N N 215 ECT H323 H N N 216 ECT H34 H N N 217 ECT H35 H N N 218 ECT H371 H N N 219 ECT H372 H N N 220 ECT H381 H N N 221 ECT H382 H N N 222 ECT H39 H N N 223 ECT H40 H N N 224 ECT H42 H N N 225 ECT H41 H N N 226 ECT H431 H N N 227 ECT H432 H N N 228 ECT H433 H N N 229 ECT H44 H N N 230 ECT H47 H N N 231 ECT H491 H N N 232 ECT H492 H N N 233 ECT H493 H N N 234 ECT H511 H N N 235 ECT H512 H N N 236 ECT H513 H N N 237 ECT H52 H N N 238 ECT H541 H N N 239 ECT H542 H N N 240 HOH O O N N 241 HOH H1 H N N 242 HOH H2 H N N 243 K K K N N 244 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 ECT C1 C2 sing N N 150 ECT C1 O27 sing N N 151 ECT C1 H11A sing N N 152 ECT C1 H12A sing N N 153 ECT C2 C3 sing N N 154 ECT C2 N22 sing N N 155 ECT C2 H2 sing N N 156 ECT C3 C4 doub Y N 157 ECT C3 C19 sing Y N 158 ECT C4 O5 sing N N 159 ECT C4 C8 sing Y N 160 ECT O5 C6 sing N N 161 ECT C6 O7 sing N N 162 ECT C6 H61 sing N N 163 ECT C6 H62 sing N N 164 ECT O7 C8 sing N N 165 ECT C8 C9 doub Y N 166 ECT C9 C10 sing N N 167 ECT C9 C14 sing Y N 168 ECT C10 H11 sing N N 169 ECT C10 H12 sing N N 170 ECT C10 H13 sing N N 171 ECT C14 O15 sing N N 172 ECT C14 C19 doub Y N 173 ECT O15 C16 sing N N 174 ECT C16 O17 doub N N 175 ECT C16 C18 sing N N 176 ECT C18 H181 sing N N 177 ECT C18 H182 sing N N 178 ECT C18 H183 sing N N 179 ECT C19 C20 sing N N 180 ECT C20 C21 sing N N 181 ECT C20 S sing N N 182 ECT C20 H20 sing N N 183 ECT C21 N22 sing N N 184 ECT C21 C44 sing N N 185 ECT C21 H21 sing N N 186 ECT N22 C40 sing N N 187 ECT S C23 sing N N 188 ECT C23 C24 sing N N 189 ECT C23 H231 sing N N 190 ECT C23 H232 sing N N 191 ECT C24 C25 sing N N 192 ECT C24 C28 sing N N 193 ECT C24 N39 sing N N 194 ECT C25 O26 doub N N 195 ECT C25 O27 sing N N 196 ECT C28 C29 doub Y N 197 ECT C28 C36 sing Y N 198 ECT C29 C30 sing Y N 199 ECT C29 H29 sing N N 200 ECT C30 O31 sing N N 201 ECT C30 C33 doub Y N 202 ECT O31 C32 sing N N 203 ECT C32 H321 sing N N 204 ECT C32 H322 sing N N 205 ECT C32 H323 sing N N 206 ECT C33 O34 sing N N 207 ECT C33 C35 sing Y N 208 ECT O34 H34 sing N N 209 ECT C35 C36 doub Y N 210 ECT C35 H35 sing N N 211 ECT C36 C37 sing N N 212 ECT C37 C38 sing N N 213 ECT C37 H371 sing N N 214 ECT C37 H372 sing N N 215 ECT C38 N39 sing N N 216 ECT C38 H381 sing N N 217 ECT C38 H382 sing N N 218 ECT N39 H39 sing N N 219 ECT C40 O40 sing N N 220 ECT C40 C41 sing N N 221 ECT C40 H40 sing N N 222 ECT O40 H42 sing N N 223 ECT C41 N42 sing N N 224 ECT C41 C54 sing N N 225 ECT C41 H41 sing N N 226 ECT N42 C43 sing N N 227 ECT N42 C44 sing N N 228 ECT C43 H431 sing N N 229 ECT C43 H432 sing N N 230 ECT C43 H433 sing N N 231 ECT C44 C45 sing N N 232 ECT C44 H44 sing N N 233 ECT C45 C46 doub Y N 234 ECT C45 C53 sing Y N 235 ECT C46 O47 sing N N 236 ECT C46 C47 sing Y N 237 ECT O47 H47 sing N N 238 ECT C47 O48 sing N N 239 ECT C47 C50 doub Y N 240 ECT O48 C49 sing N N 241 ECT C49 H491 sing N N 242 ECT C49 H492 sing N N 243 ECT C49 H493 sing N N 244 ECT C50 C51 sing N N 245 ECT C50 C52 sing Y N 246 ECT C51 H511 sing N N 247 ECT C51 H512 sing N N 248 ECT C51 H513 sing N N 249 ECT C52 C53 doub Y N 250 ECT C52 H52 sing N N 251 ECT C53 C54 sing N N 252 ECT C54 H541 sing N N 253 ECT C54 H542 sing N N 254 HOH O H1 sing N N 255 HOH O H2 sing N N 256 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9T8F 'double helix' 9T8F 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.415 -0.161 0.419 -11.183 -11.464 4.017 1 A_DC1:DG10_B A 1 ? B 10 ? 19 1 1 A DG 2 1_555 B DC 9 1_555 0.211 -0.054 0.334 7.171 -6.809 -2.397 2 A_DG2:DC9_B A 2 ? B 9 ? 19 1 1 A DA 3 1_555 B DT 8 1_555 0.419 -0.402 -0.443 -2.696 -6.857 -5.635 3 A_DA3:DT8_B A 3 ? B 8 ? 20 1 1 A DT 4 1_555 B DA 7 1_555 -0.585 -0.380 -0.088 3.344 -15.185 -3.704 4 A_DT4:DA7_B A 4 ? B 7 ? 20 1 1 A DG 5 1_555 B DC 6 1_555 0.155 -0.261 -0.102 -4.056 -2.576 0.047 5 A_DG5:DC6_B A 5 ? B 6 ? 19 1 1 A DC 6 1_555 B DG 5 1_555 0.323 -0.343 -0.157 -0.917 -5.418 -1.467 6 A_DC6:DG5_B A 6 ? B 5 ? 19 1 1 A DA 7 1_555 B DT 4 1_555 -0.440 -0.093 0.000 12.330 -13.497 -5.828 7 A_DA7:DT4_B A 7 ? B 4 ? 20 1 1 A DT 8 1_555 B DA 3 1_555 0.105 -0.058 -0.276 11.943 -15.041 5.766 8 A_DT8:DA3_B A 8 ? B 3 ? 20 1 1 A DC 9 1_555 B DG 2 1_555 0.154 -0.194 -0.314 11.065 -18.766 -1.777 9 A_DC9:DG2_B A 9 ? B 2 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 -0.110 -0.231 -0.193 0.006 7.575 -6.098 10 A_DG10:DC1_B A 10 ? B 1 ? 19 1 1 C DC 1 1_555 D DG 10 1_555 0.762 -0.043 0.906 -22.224 -10.831 2.499 11 C_DC1:DG10_D C 1 ? D 10 ? 19 1 1 C DG 2 1_555 D DC 9 1_555 -0.024 0.108 0.091 0.596 -8.809 1.674 12 C_DG2:DC9_D C 2 ? D 9 ? 19 1 1 C DA 3 1_555 D DT 8 1_555 0.106 -0.250 -0.295 -8.516 -15.421 -6.515 13 C_DA3:DT8_D C 3 ? D 8 ? 20 1 1 C DT 4 1_555 D DA 7 1_555 -0.591 -0.155 -0.152 2.106 -14.601 5.093 14 C_DT4:DA7_D C 4 ? D 7 ? 20 1 1 C DG 5 1_555 D DC 6 1_555 0.125 -0.327 0.100 -1.986 -6.986 -5.602 15 C_DG5:DC6_D C 5 ? D 6 ? 19 1 1 C DC 6 1_555 D DG 5 1_555 0.456 -0.081 0.199 -11.183 -11.061 -3.817 16 C_DC6:DG5_D C 6 ? D 5 ? 19 1 1 C DA 7 1_555 D DT 4 1_555 0.049 -0.181 -0.457 1.152 -11.744 -7.232 17 C_DA7:DT4_D C 7 ? D 4 ? 20 1 1 C DT 8 1_555 D DA 3 1_555 -0.308 -0.279 -0.276 13.163 -16.072 -7.787 18 C_DT8:DA3_D C 8 ? D 3 ? 20 1 1 C DC 9 1_555 D DG 2 1_555 0.024 -0.250 -0.026 5.556 -11.497 -0.532 19 C_DC9:DG2_D C 9 ? D 2 ? 19 1 1 C DG 10 1_555 D DC 1 1_555 -0.198 -0.364 0.161 10.259 1.447 -5.153 20 C_DG10:DC1_D C 10 ? D 1 ? 19 1 1 E DC 1 1_555 F DG 10 1_555 0.138 0.038 0.264 -0.606 6.686 -8.864 21 E_DC1:DG10_F E 1 ? F 10 ? 19 1 1 E DG 2 1_555 F DC 9 1_555 -0.860 -0.173 0.179 -7.001 -15.088 0.485 22 E_DG2:DC9_F E 2 ? F 9 ? 19 1 1 E DA 3 1_555 F DT 8 1_555 0.430 -0.326 -0.028 -8.107 -10.596 -5.696 23 E_DA3:DT8_F E 3 ? F 8 ? 20 1 1 E DT 4 1_555 F DA 7 1_555 -0.053 -0.175 -0.110 -2.701 -17.430 0.621 24 E_DT4:DA7_F E 4 ? F 7 ? 20 1 1 E DG 5 1_555 F DC 6 1_555 -0.145 -0.057 -0.523 -10.179 -5.128 -1.316 25 E_DG5:DC6_F E 5 ? F 6 ? 19 1 1 E DC 6 1_555 F DG 5 1_555 0.503 -0.241 0.046 -5.036 -9.564 0.531 26 E_DC6:DG5_F E 6 ? F 5 ? 19 1 1 E DA 7 1_555 F DT 4 1_555 -0.204 0.038 0.038 12.928 -22.057 -1.069 27 E_DA7:DT4_F E 7 ? F 4 ? 20 1 1 E DT 8 1_555 F DA 3 1_555 0.459 -0.172 -0.318 7.724 -12.208 -3.384 28 E_DT8:DA3_F E 8 ? F 3 ? 20 1 1 E DC 9 1_555 F DG 2 1_555 1.285 -0.716 0.507 -5.930 -17.984 -7.609 29 E_DC9:DG2_F E 9 ? F 2 ? 19 1 1 E DG 10 1_555 F DC 1 1_555 -1.341 -0.328 0.277 10.685 -12.888 14.233 30 E_DG10:DC1_F E 10 ? F 1 ? 19 1 1 G DC 1 1_555 H DG 10 1_555 0.150 -0.112 0.241 -3.812 -9.089 -3.962 31 G_DC1:DG10_H G 1 ? H 10 ? 19 1 1 G DG 2 1_555 H DC 9 1_555 -0.330 -0.240 -0.374 -7.861 -10.697 -0.480 32 G_DG2:DC9_H G 2 ? H 9 ? 19 1 1 G DA 3 1_555 H DT 8 1_555 0.646 -0.232 -0.358 -9.831 -14.512 -2.874 33 G_DA3:DT8_H G 3 ? H 8 ? 20 1 1 G DT 4 1_555 H DA 7 1_555 0.438 -0.260 -0.659 -3.882 -13.530 -4.226 34 G_DT4:DA7_H G 4 ? H 7 ? 20 1 1 G DG 5 1_555 H DC 6 1_555 -0.930 -0.541 -0.090 0.632 -3.058 -5.579 35 G_DG5:DC6_H G 5 ? H 6 ? 19 1 1 G DC 6 1_555 H DG 5 1_555 0.380 0.008 -0.331 5.129 -4.045 1.155 36 G_DC6:DG5_H G 6 ? H 5 ? 19 1 1 G DA 7 1_555 H DT 4 1_555 0.596 -0.164 0.372 -0.084 -14.165 -6.214 37 G_DA7:DT4_H G 7 ? H 4 ? 20 1 1 G DT 8 1_555 H DA 3 1_555 0.071 -0.165 -0.042 1.908 -13.887 3.664 38 G_DT8:DA3_H G 8 ? H 3 ? 20 1 1 G DC 9 1_555 H DG 2 1_555 0.955 -0.337 0.569 -10.994 -15.863 9.997 39 G_DC9:DG2_H G 9 ? H 2 ? 19 1 1 G DG 10 1_555 H DC 1 1_555 0.540 -0.267 0.529 2.766 -14.900 -1.873 40 G_DG10:DC1_H G 10 ? H 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DG 2 1_555 B DC 9 1_555 -0.758 0.469 2.859 -0.206 10.423 32.028 -0.719 1.279 2.871 18.294 0.361 33.640 1 AA_DC1DG2:DC9DG10_BB A 1 ? B 10 ? A 2 ? B 9 ? 1 A DG 2 1_555 B DC 9 1_555 A DA 3 1_555 B DT 8 1_555 -0.521 -0.349 3.568 2.982 3.741 39.875 -0.969 1.126 3.476 5.461 -4.353 40.149 2 AA_DG2DA3:DT8DC9_BB A 2 ? B 9 ? A 3 ? B 8 ? 1 A DA 3 1_555 B DT 8 1_555 A DT 4 1_555 B DA 7 1_555 0.732 -0.900 3.087 -4.685 1.890 26.016 -2.422 -2.731 2.842 4.148 10.283 26.493 3 AA_DA3DT4:DA7DT8_BB A 3 ? B 8 ? A 4 ? B 7 ? 1 A DT 4 1_555 B DA 7 1_555 A DG 5 1_555 B DC 6 1_555 1.081 -0.155 3.504 5.679 7.544 37.426 -1.254 -0.870 3.529 11.534 -8.682 38.558 4 AA_DT4DG5:DC6DA7_BB A 4 ? B 7 ? A 5 ? B 6 ? 1 A DG 5 1_555 B DC 6 1_555 A DC 6 1_555 B DG 5 1_555 -0.939 -0.476 3.215 1.254 6.589 30.836 -2.057 1.952 3.011 12.211 -2.324 31.540 5 AA_DG5DC6:DG5DC6_BB A 5 ? B 6 ? A 6 ? B 5 ? 1 A DC 6 1_555 B DG 5 1_555 A DA 7 1_555 B DT 4 1_555 -0.019 0.288 3.149 -0.561 9.023 30.532 -1.086 -0.066 3.105 16.681 1.036 31.812 6 AA_DC6DA7:DT4DG5_BB A 6 ? B 5 ? A 7 ? B 4 ? 1 A DA 7 1_555 B DT 4 1_555 A DT 8 1_555 B DA 3 1_555 0.535 -0.587 3.249 1.313 -1.368 34.031 -0.784 -0.704 3.287 -2.334 -2.242 34.082 7 AA_DA7DT8:DA3DT4_BB A 7 ? B 4 ? A 8 ? B 3 ? 1 A DT 8 1_555 B DA 3 1_555 A DC 9 1_555 B DG 2 1_555 0.052 0.359 3.270 4.299 8.037 36.982 -0.484 0.473 3.261 12.439 -6.654 38.051 8 AA_DT8DC9:DG2DA3_BB A 8 ? B 3 ? A 9 ? B 2 ? 1 A DC 9 1_555 B DG 2 1_555 A DG 10 1_555 B DC 1 1_555 -0.591 0.293 3.555 -1.971 6.422 36.680 -0.478 0.638 3.580 10.101 3.100 37.269 9 AA_DC9DG10:DC1DG2_BB A 9 ? B 2 ? A 10 ? B 1 ? 1 C DC 1 1_555 D DG 10 1_555 C DG 2 1_555 D DC 9 1_555 -0.015 0.616 2.769 6.141 8.034 27.691 -0.288 1.177 2.769 16.120 -12.321 29.446 10 CC_DC1DG2:DC9DG10_DD C 1 ? D 10 ? C 2 ? D 9 ? 1 C DG 2 1_555 D DC 9 1_555 C DA 3 1_555 D DT 8 1_555 -0.256 -0.462 3.426 0.678 9.122 37.645 -1.852 0.473 3.227 13.887 -1.033 38.702 11 CC_DG2DA3:DT8DC9_DD C 2 ? D 9 ? C 3 ? D 8 ? 1 C DA 3 1_555 D DT 8 1_555 C DT 4 1_555 D DA 7 1_555 0.470 -0.377 2.908 -0.013 0.843 29.378 -0.903 -0.929 2.896 1.661 0.026 29.390 12 CC_DA3DT4:DA7DT8_DD C 3 ? D 8 ? C 4 ? D 7 ? 1 C DT 4 1_555 D DA 7 1_555 C DG 5 1_555 D DC 6 1_555 -0.268 -0.030 3.461 -5.465 14.063 37.186 -1.764 -0.277 3.249 21.025 8.171 40.029 13 CC_DT4DG5:DC6DA7_DD C 4 ? D 7 ? C 5 ? D 6 ? 1 C DG 5 1_555 D DC 6 1_555 C DC 6 1_555 D DG 5 1_555 -0.517 -0.364 3.517 -1.921 -5.093 34.943 0.217 0.544 3.555 -8.418 3.175 35.351 14 CC_DG5DC6:DG5DC6_DD C 5 ? D 6 ? C 6 ? D 5 ? 1 C DC 6 1_555 D DG 5 1_555 C DA 7 1_555 D DT 4 1_555 0.030 0.210 3.326 7.955 11.947 31.913 -1.521 1.194 3.125 20.484 -13.639 34.915 15 CC_DC6DA7:DT4DG5_DD C 6 ? D 5 ? C 7 ? D 4 ? 1 C DA 7 1_555 D DT 4 1_555 C DT 8 1_555 D DA 3 1_555 0.132 -0.639 2.869 -2.117 2.091 31.680 -1.497 -0.578 2.807 3.821 3.868 31.816 16 CC_DA7DT8:DA3DT4_DD C 7 ? D 4 ? C 8 ? D 3 ? 1 C DT 8 1_555 D DA 3 1_555 C DC 9 1_555 D DG 2 1_555 0.672 0.832 3.582 2.412 3.551 38.975 0.767 -0.680 3.675 5.303 -3.602 39.202 17 CC_DT8DC9:DG2DA3_DD C 8 ? D 3 ? C 9 ? D 2 ? 1 C DC 9 1_555 D DG 2 1_555 C DG 10 1_555 D DC 1 1_555 -0.804 0.712 3.109 -3.506 3.686 36.268 0.641 0.811 3.225 5.886 5.599 36.612 18 CC_DC9DG10:DC1DG2_DD C 9 ? D 2 ? C 10 ? D 1 ? 1 E DC 1 1_555 F DG 10 1_555 E DG 2 1_555 F DC 9 1_555 1.018 0.092 3.474 0.991 -0.387 34.554 0.219 -1.550 3.500 -0.652 -1.667 34.570 19 EE_DC1DG2:DC9DG10_FF E 1 ? F 10 ? E 2 ? F 9 ? 1 E DG 2 1_555 F DC 9 1_555 E DA 3 1_555 F DT 8 1_555 -0.660 0.450 3.366 0.146 4.843 44.895 0.137 0.874 3.392 6.319 -0.190 45.143 20 EE_DG2DA3:DT8DC9_FF E 2 ? F 9 ? E 3 ? F 8 ? 1 E DA 3 1_555 F DT 8 1_555 E DT 4 1_555 F DA 7 1_555 0.207 -0.597 3.065 1.858 -2.484 29.347 -0.671 -0.033 3.111 -4.885 -3.654 29.507 21 EE_DA3DT4:DA7DT8_FF E 3 ? F 8 ? E 4 ? F 7 ? 1 E DT 4 1_555 F DA 7 1_555 E DG 5 1_555 F DC 6 1_555 0.445 0.342 3.603 1.322 11.679 32.979 -1.415 -0.516 3.533 19.806 -2.243 34.956 22 EE_DT4DG5:DC6DA7_FF E 4 ? F 7 ? E 5 ? F 6 ? 1 E DG 5 1_555 F DC 6 1_555 E DC 6 1_555 F DG 5 1_555 -0.911 -0.184 3.085 -5.595 3.723 37.853 -0.725 0.714 3.152 5.685 8.543 38.424 23 EE_DG5DC6:DG5DC6_FF E 5 ? F 6 ? E 6 ? F 5 ? 1 E DC 6 1_555 F DG 5 1_555 E DA 7 1_555 F DT 4 1_555 0.194 0.247 3.047 0.828 9.653 27.345 -1.526 -0.214 2.965 19.652 -1.685 28.980 24 EE_DC6DA7:DT4DG5_FF E 6 ? F 5 ? E 7 ? F 4 ? 1 E DA 7 1_555 F DT 4 1_555 E DT 8 1_555 F DA 3 1_555 0.415 -0.605 3.352 2.314 0.004 35.343 -0.995 -0.333 3.372 0.006 -3.806 35.416 25 EE_DA7DT8:DA3DT4_FF E 7 ? F 4 ? E 8 ? F 3 ? 1 E DT 8 1_555 F DA 3 1_555 E DC 9 1_555 F DG 2 1_555 -0.388 -0.071 3.762 -3.059 7.114 43.193 -0.875 0.184 3.723 9.571 4.115 43.849 26 EE_DT8DC9:DG2DA3_FF E 8 ? F 3 ? E 9 ? F 2 ? 1 E DC 9 1_555 F DG 2 1_555 E DG 10 1_555 F DC 1 1_555 0.873 -0.015 2.836 2.600 12.795 16.272 -4.918 -1.424 2.319 38.178 -7.758 20.836 27 EE_DC9DG10:DC1DG2_FF E 9 ? F 2 ? E 10 ? F 1 ? 1 G DC 1 1_555 H DG 10 1_555 G DG 2 1_555 H DC 9 1_555 0.690 0.689 3.474 4.550 3.439 35.414 0.584 -0.413 3.581 5.608 -7.420 35.855 28 GG_DC1DG2:DC9DG10_HH G 1 ? H 10 ? G 2 ? H 9 ? 1 G DG 2 1_555 H DC 9 1_555 G DA 3 1_555 H DT 8 1_555 -0.764 0.654 3.324 -6.498 9.036 43.455 -0.009 0.379 3.460 11.971 8.609 44.791 29 GG_DG2DA3:DT8DC9_HH G 2 ? H 9 ? G 3 ? H 8 ? 1 G DA 3 1_555 H DT 8 1_555 G DT 4 1_555 H DA 7 1_555 -0.211 -0.469 3.010 1.512 -1.369 32.596 -0.615 0.617 3.014 -2.436 -2.690 32.658 30 GG_DA3DT4:DA7DT8_HH G 3 ? H 8 ? G 4 ? H 7 ? 1 G DT 4 1_555 H DA 7 1_555 G DG 5 1_555 H DC 6 1_555 0.170 0.071 3.359 -4.682 8.087 19.769 -3.055 -2.326 3.033 22.034 12.756 21.846 31 GG_DT4DG5:DC6DA7_HH G 4 ? H 7 ? G 5 ? H 6 ? 1 G DG 5 1_555 H DC 6 1_555 G DC 6 1_555 H DG 5 1_555 0.478 0.274 3.212 2.999 4.581 43.686 -0.063 -0.358 3.248 6.127 -4.011 44.011 32 GG_DG5DC6:DG5DC6_HH G 5 ? H 6 ? G 6 ? H 5 ? 1 G DC 6 1_555 H DG 5 1_555 G DA 7 1_555 H DT 4 1_555 -0.207 -0.333 3.391 -5.208 8.315 37.736 -1.540 -0.340 3.248 12.598 7.891 38.945 33 GG_DC6DA7:DT4DG5_HH G 6 ? H 5 ? G 7 ? H 4 ? 1 G DA 7 1_555 H DT 4 1_555 G DT 8 1_555 H DA 3 1_555 0.661 -0.779 3.283 7.586 -1.559 25.533 -1.265 0.629 3.376 -3.427 -16.682 26.663 34 GG_DA7DT8:DA3DT4_HH G 7 ? H 4 ? G 8 ? H 3 ? 1 G DT 8 1_555 H DA 3 1_555 G DC 9 1_555 H DG 2 1_555 0.015 -0.256 3.496 -1.873 5.964 45.039 -0.891 -0.195 3.434 7.741 2.431 45.449 35 GG_DT8DC9:DG2DA3_HH G 8 ? H 3 ? G 9 ? H 2 ? 1 G DC 9 1_555 H DG 2 1_555 G DG 10 1_555 H DC 1 1_555 -0.375 0.023 3.025 -1.378 5.872 35.822 -0.725 0.423 3.003 9.464 2.220 36.310 36 GG_DC9DG10:DC1DG2_HH G 9 ? H 2 ? G 10 ? H 1 ? # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country Spain _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'ideal B-DNA' # _atom_sites.entry_id 9T8F _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.038346 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024425 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004264 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.3103 20.8439 1.0201 10.2075 1.5888 0.5687 0.8651 51.6512 0.2156 H 1 1 0.4930 10.5109 0.3229 26.1257 0.1402 3.1424 0.0408 57.7997 0.0030 K 19 19 8.2190 12.7949 7.4402 0.7748 1.0520 213.1870 0.8659 41.6841 1.6926 N 7 7 12.2220 0.0057 3.1346 9.8933 2.0141 28.9975 1.1672 0.5826 -11.5379 O 8 8 3.0487 13.2771 2.2870 5.7011 1.5464 0.3239 0.8671 32.9089 0.2508 P 15 15 6.4348 1.9067 4.1793 27.1570 1.7801 0.5260 1.4909 68.1645 1.2679 S 16 16 6.9054 1.4679 5.2035 22.2151 1.4379 0.2536 1.5863 56.1720 1.0495 # loop_ #