HEADER VIRAL PROTEIN 18-NOV-25 9TAC TITLE CRYSTAL STRUCTURE OF HUMAN ADENOVIRUS 52 SHORT FIBER KNOB MUTANT K349R TITLE 2 IN COMPLEX WITH ALPHA-(2,8)-PENTASIALIC ACID (DP5) COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBER-1; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ADENOVIRUS 52; SOURCE 3 ORGANISM_TAXID: 332179; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HUMAN ADENOVIRUS FIBER KNOB, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.VONMETZ,T.STEHLE REVDAT 1 26-AUG-26 9TAC 0 JRNL AUTH K.VONMETZ,T.STEHLE JRNL TITL CRYSTAL STRUCTURES OF HUMAN ADENOVIRUS 52 SHORT FIBER KNOB JRNL TITL 2 MUTANTS IN COMPLEX WITH ALPHA-(2,8)-PENTASIALIC ACID (DP5) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 29145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1458 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7300 - 4.5300 1.00 2929 155 0.1711 0.1830 REMARK 3 2 4.5300 - 3.5900 0.99 2808 147 0.1587 0.1603 REMARK 3 3 3.5900 - 3.1400 1.00 2783 147 0.1787 0.2028 REMARK 3 4 3.1400 - 2.8500 1.00 2758 145 0.2020 0.2075 REMARK 3 5 2.8500 - 2.6500 1.00 2747 145 0.2166 0.2489 REMARK 3 6 2.6500 - 2.4900 1.00 2737 144 0.2333 0.2749 REMARK 3 7 2.4900 - 2.3700 1.00 2746 144 0.2307 0.2893 REMARK 3 8 2.3700 - 2.2600 1.00 2719 143 0.2559 0.2984 REMARK 3 9 2.2600 - 2.1800 1.00 2737 144 0.2620 0.3047 REMARK 3 10 2.1800 - 2.1000 1.00 2723 144 0.2522 0.2751 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.219 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.182 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 4033 REMARK 3 ANGLE : 1.902 5500 REMARK 3 CHIRALITY : 0.143 649 REMARK 3 PLANARITY : 0.013 696 REMARK 3 DIHEDRAL : 20.160 1376 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9TAC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1292152222. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999997 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29147 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 46.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.160 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.350 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.5 % (V/V) MPD; 12.5 % (W/V) REMARK 280 PEG3350; 25 % (W/V) PEG1000; 0.1 M TRIS/BICINE PH 8.5; 1.6 MM OF REMARK 280 EACH GLYCINE, NA L-GLUTAMATE, DL-ALANINE, DL-LYSINE, DL-SERINE; REMARK 280 SEED STOCK N243R 1:100, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.75050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.72900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.12250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.72900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.75050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.12250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 155 REMARK 465 ARG A 156 REMARK 465 GLY A 157 REMARK 465 SER A 158 REMARK 465 HIS A 159 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 GLY A 165 REMARK 465 SER A 166 REMARK 465 GLY A 167 REMARK 465 SER A 168 REMARK 465 GLY A 169 REMARK 465 SER A 170 REMARK 465 GLY A 171 REMARK 465 ILE A 172 REMARK 465 GLU A 173 REMARK 465 GLY A 174 REMARK 465 ARG A 175 REMARK 465 PRO A 176 REMARK 465 TYR A 177 REMARK 465 ASN A 178 REMARK 465 GLY A 179 REMARK 465 THR A 180 REMARK 465 GLY A 181 REMARK 465 SER A 182 REMARK 465 ARG A 183 REMARK 465 PHE A 184 REMARK 465 ASN A 185 REMARK 465 SER A 186 REMARK 465 SER A 187 REMARK 465 GLY A 188 REMARK 465 ALA A 189 REMARK 465 ILE A 190 REMARK 465 ALA A 191 REMARK 465 PHE A 192 REMARK 465 MET B 155 REMARK 465 ARG B 156 REMARK 465 GLY B 157 REMARK 465 SER B 158 REMARK 465 HIS B 159 REMARK 465 HIS B 160 REMARK 465 HIS B 161 REMARK 465 HIS B 162 REMARK 465 HIS B 163 REMARK 465 HIS B 164 REMARK 465 GLY B 165 REMARK 465 SER B 166 REMARK 465 GLY B 167 REMARK 465 SER B 168 REMARK 465 GLY B 169 REMARK 465 SER B 170 REMARK 465 GLY B 171 REMARK 465 ILE B 172 REMARK 465 GLU B 173 REMARK 465 GLY B 174 REMARK 465 ARG B 175 REMARK 465 PRO B 176 REMARK 465 TYR B 177 REMARK 465 ASN B 178 REMARK 465 GLY B 179 REMARK 465 THR B 180 REMARK 465 GLY B 181 REMARK 465 SER B 182 REMARK 465 ARG B 183 REMARK 465 PHE B 184 REMARK 465 ASN B 185 REMARK 465 SER B 186 REMARK 465 SER B 187 REMARK 465 GLY B 188 REMARK 465 ALA B 189 REMARK 465 ILE B 190 REMARK 465 ALA B 191 REMARK 465 PHE B 192 REMARK 465 GLY B 193 REMARK 465 SER B 278 REMARK 465 PRO B 279 REMARK 465 ALA B 280 REMARK 465 SER B 281 REMARK 465 ASN B 282 REMARK 465 PRO B 283 REMARK 465 THR B 284 REMARK 465 TYR B 285 REMARK 465 MET C 155 REMARK 465 ARG C 156 REMARK 465 GLY C 157 REMARK 465 SER C 158 REMARK 465 HIS C 159 REMARK 465 HIS C 160 REMARK 465 HIS C 161 REMARK 465 HIS C 162 REMARK 465 HIS C 163 REMARK 465 HIS C 164 REMARK 465 GLY C 165 REMARK 465 SER C 166 REMARK 465 GLY C 167 REMARK 465 SER C 168 REMARK 465 GLY C 169 REMARK 465 GLY C 181 REMARK 465 SER C 182 REMARK 465 ARG C 183 REMARK 465 PHE C 184 REMARK 465 ASN C 185 REMARK 465 SER C 186 REMARK 465 SER C 187 REMARK 465 GLY C 188 REMARK 465 ALA C 189 REMARK 465 ILE C 190 REMARK 465 ALA C 191 REMARK 465 PHE C 192 REMARK 465 GLN C 275 REMARK 465 GLY C 276 REMARK 465 ASP C 277 REMARK 465 SER C 278 REMARK 465 PRO C 279 REMARK 465 ALA C 280 REMARK 465 SER C 281 REMARK 465 ASN C 282 REMARK 465 PRO C 283 REMARK 465 THR C 284 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 275 CG CD OE1 NE2 REMARK 470 ARG A 347 CD NE CZ NH1 NH2 REMARK 470 LYS B 260 CE NZ REMARK 470 SER B 272 OG REMARK 470 GLN B 275 CG CD OE1 NE2 REMARK 470 ASP B 277 CA C O CB CG OD1 OD2 REMARK 470 ARG C 274 CG CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 304 CD REMARK 480 GLN B 195 NE2 REMARK 480 GLU C 173 CD REMARK 480 ASN C 269 CG REMARK 480 GLN C 312 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O8 SIA S 1 C1 SIA S 2 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 243 79.05 -151.05 REMARK 500 THR A 270 46.96 -69.21 REMARK 500 ASN B 243 82.15 -152.96 REMARK 500 GLN B 275 102.15 -44.50 REMARK 500 ALA B 351 113.15 -160.88 REMARK 500 ALA C 351 114.39 -162.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG C 175 0.24 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 HIS A 263 -12.20 REMARK 500 HIS A 263 -12.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 581 DISTANCE = 6.19 ANGSTROMS DBREF 9TAC A 183 363 UNP A0MK70 A0MK70_9ADEN 183 363 DBREF 9TAC B 183 363 UNP A0MK70 A0MK70_9ADEN 183 363 DBREF 9TAC C 183 363 UNP A0MK70 A0MK70_9ADEN 183 363 SEQADV 9TAC MET A 155 UNP A0MK70 INITIATING METHIONINE SEQADV 9TAC ARG A 156 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY A 157 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER A 158 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS A 159 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS A 160 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS A 161 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS A 162 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS A 163 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS A 164 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY A 165 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER A 166 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY A 167 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER A 168 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY A 169 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER A 170 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY A 171 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ILE A 172 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLU A 173 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY A 174 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ARG A 175 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC PRO A 176 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC TYR A 177 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ASN A 178 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY A 179 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC THR A 180 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY A 181 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER A 182 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ARG A 349 UNP A0MK70 LYS 349 ENGINEERED MUTATION SEQADV 9TAC MET B 155 UNP A0MK70 INITIATING METHIONINE SEQADV 9TAC ARG B 156 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY B 157 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER B 158 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS B 159 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS B 160 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS B 161 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS B 162 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS B 163 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS B 164 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY B 165 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER B 166 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY B 167 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER B 168 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY B 169 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER B 170 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY B 171 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ILE B 172 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLU B 173 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY B 174 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ARG B 175 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC PRO B 176 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC TYR B 177 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ASN B 178 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY B 179 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC THR B 180 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY B 181 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER B 182 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ARG B 349 UNP A0MK70 LYS 349 ENGINEERED MUTATION SEQADV 9TAC MET C 155 UNP A0MK70 INITIATING METHIONINE SEQADV 9TAC ARG C 156 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY C 157 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER C 158 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS C 159 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS C 160 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS C 161 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS C 162 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS C 163 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC HIS C 164 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY C 165 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER C 166 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY C 167 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER C 168 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY C 169 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER C 170 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY C 171 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ILE C 172 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLU C 173 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY C 174 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ARG C 175 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC PRO C 176 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC TYR C 177 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ASN C 178 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY C 179 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC THR C 180 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC GLY C 181 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC SER C 182 UNP A0MK70 EXPRESSION TAG SEQADV 9TAC ARG C 349 UNP A0MK70 LYS 349 ENGINEERED MUTATION SEQRES 1 A 209 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER GLY SEQRES 2 A 209 SER GLY SER GLY ILE GLU GLY ARG PRO TYR ASN GLY THR SEQRES 3 A 209 GLY SER ARG PHE ASN SER SER GLY ALA ILE ALA PHE GLY SEQRES 4 A 209 ILE GLN THR LEU TRP THR PRO PRO THR SER ASN PRO ASN SEQRES 5 A 209 CYS THR VAL TYR THR GLU SER ASP SER LEU LEU SER LEU SEQRES 6 A 209 CYS LEU THR LYS CYS GLY ALA HIS VAL LEU GLY SER VAL SEQRES 7 A 209 SER LEU THR GLY VAL ALA GLY THR MET THR ASN MET ALA SEQRES 8 A 209 GLU THR SER LEU ALA ILE GLU PHE THR PHE ASP ASP THR SEQRES 9 A 209 GLY LYS LEU LEU HIS SER PRO LEU VAL ASN ASN THR PHE SEQRES 10 A 209 SER ILE ARG GLN GLY ASP SER PRO ALA SER ASN PRO THR SEQRES 11 A 209 TYR ASN ALA LEU ALA PHE MET PRO ASN SER THR LEU TYR SEQRES 12 A 209 ALA ARG GLY GLY SER GLY GLU PRO ARG ASN ASN TYR TYR SEQRES 13 A 209 VAL GLN THR TYR LEU ARG GLY ASN VAL GLN ARG PRO ILE SEQRES 14 A 209 THR LEU THR VAL THR PHE ASN SER ALA ALA THR GLY TYR SEQRES 15 A 209 SER LEU SER PHE LYS TRP THR ALA VAL VAL ARG GLU ARG SEQRES 16 A 209 PHE ALA ALA PRO ALA THR SER PHE CYS TYR ILE THR GLU SEQRES 17 A 209 GLN SEQRES 1 B 209 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER GLY SEQRES 2 B 209 SER GLY SER GLY ILE GLU GLY ARG PRO TYR ASN GLY THR SEQRES 3 B 209 GLY SER ARG PHE ASN SER SER GLY ALA ILE ALA PHE GLY SEQRES 4 B 209 ILE GLN THR LEU TRP THR PRO PRO THR SER ASN PRO ASN SEQRES 5 B 209 CYS THR VAL TYR THR GLU SER ASP SER LEU LEU SER LEU SEQRES 6 B 209 CYS LEU THR LYS CYS GLY ALA HIS VAL LEU GLY SER VAL SEQRES 7 B 209 SER LEU THR GLY VAL ALA GLY THR MET THR ASN MET ALA SEQRES 8 B 209 GLU THR SER LEU ALA ILE GLU PHE THR PHE ASP ASP THR SEQRES 9 B 209 GLY LYS LEU LEU HIS SER PRO LEU VAL ASN ASN THR PHE SEQRES 10 B 209 SER ILE ARG GLN GLY ASP SER PRO ALA SER ASN PRO THR SEQRES 11 B 209 TYR ASN ALA LEU ALA PHE MET PRO ASN SER THR LEU TYR SEQRES 12 B 209 ALA ARG GLY GLY SER GLY GLU PRO ARG ASN ASN TYR TYR SEQRES 13 B 209 VAL GLN THR TYR LEU ARG GLY ASN VAL GLN ARG PRO ILE SEQRES 14 B 209 THR LEU THR VAL THR PHE ASN SER ALA ALA THR GLY TYR SEQRES 15 B 209 SER LEU SER PHE LYS TRP THR ALA VAL VAL ARG GLU ARG SEQRES 16 B 209 PHE ALA ALA PRO ALA THR SER PHE CYS TYR ILE THR GLU SEQRES 17 B 209 GLN SEQRES 1 C 209 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER GLY SEQRES 2 C 209 SER GLY SER GLY ILE GLU GLY ARG PRO TYR ASN GLY THR SEQRES 3 C 209 GLY SER ARG PHE ASN SER SER GLY ALA ILE ALA PHE GLY SEQRES 4 C 209 ILE GLN THR LEU TRP THR PRO PRO THR SER ASN PRO ASN SEQRES 5 C 209 CYS THR VAL TYR THR GLU SER ASP SER LEU LEU SER LEU SEQRES 6 C 209 CYS LEU THR LYS CYS GLY ALA HIS VAL LEU GLY SER VAL SEQRES 7 C 209 SER LEU THR GLY VAL ALA GLY THR MET THR ASN MET ALA SEQRES 8 C 209 GLU THR SER LEU ALA ILE GLU PHE THR PHE ASP ASP THR SEQRES 9 C 209 GLY LYS LEU LEU HIS SER PRO LEU VAL ASN ASN THR PHE SEQRES 10 C 209 SER ILE ARG GLN GLY ASP SER PRO ALA SER ASN PRO THR SEQRES 11 C 209 TYR ASN ALA LEU ALA PHE MET PRO ASN SER THR LEU TYR SEQRES 12 C 209 ALA ARG GLY GLY SER GLY GLU PRO ARG ASN ASN TYR TYR SEQRES 13 C 209 VAL GLN THR TYR LEU ARG GLY ASN VAL GLN ARG PRO ILE SEQRES 14 C 209 THR LEU THR VAL THR PHE ASN SER ALA ALA THR GLY TYR SEQRES 15 C 209 SER LEU SER PHE LYS TRP THR ALA VAL VAL ARG GLU ARG SEQRES 16 C 209 PHE ALA ALA PRO ALA THR SER PHE CYS TYR ILE THR GLU SEQRES 17 C 209 GLN HET SIA S 1 21 HET SIA S 2 20 HET SIA S 3 20 HET EDO A 401 4 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO B 401 4 HET MPD B 402 8 HET EDO C 401 4 HET EDO C 402 4 HET EDO C 403 4 HET EDO C 404 4 HET EDO C 405 4 HET EDO C 406 4 HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 4 SIA 3(C11 H19 N O9) FORMUL 5 EDO 11(C2 H6 O2) FORMUL 10 MPD C6 H14 O2 FORMUL 17 HOH *224(H2 O) HELIX 1 AA1 ALA A 238 ASN A 243 5 6 HELIX 2 AA2 LEU A 266 THR A 270 5 5 HELIX 3 AA3 ASN A 286 PHE A 290 5 5 HELIX 4 AA4 GLU A 304 ARG A 306 5 3 HELIX 5 AA5 ARG A 316 ASN A 318 5 3 HELIX 6 AA6 ALA B 238 ASN B 243 5 6 HELIX 7 AA7 ASN B 286 PHE B 290 5 5 HELIX 8 AA8 GLU B 304 ARG B 306 5 3 HELIX 9 AA9 ARG B 316 ASN B 318 5 3 HELIX 10 AB1 ALA C 238 ASN C 243 5 6 HELIX 11 AB2 ASN C 286 PHE C 290 5 5 HELIX 12 AB3 GLU C 304 ARG C 306 5 3 HELIX 13 AB4 ARG C 316 ASN C 318 5 3 SHEET 1 AA1 5 SER A 272 ILE A 273 0 SHEET 2 AA1 5 THR A 196 TRP A 198 -1 N TRP A 198 O SER A 272 SHEET 3 AA1 5 SER A 215 CYS A 224 -1 O LEU A 221 N LEU A 197 SHEET 4 AA1 5 HIS A 227 GLY A 236 -1 O LEU A 229 N THR A 222 SHEET 5 AA1 5 ALA A 351 ILE A 360 -1 O ALA A 352 N LEU A 234 SHEET 1 AA2 5 LEU A 261 HIS A 263 0 SHEET 2 AA2 5 SER A 248 PHE A 255 -1 N THR A 254 O LEU A 262 SHEET 3 AA2 5 TYR A 336 THR A 343 -1 O TRP A 342 N LEU A 249 SHEET 4 AA2 5 PRO A 322 PHE A 329 -1 N THR A 326 O LYS A 341 SHEET 5 AA2 5 ASN A 308 TYR A 314 -1 N VAL A 311 O LEU A 325 SHEET 1 AA3 5 SER B 272 ILE B 273 0 SHEET 2 AA3 5 THR B 196 TRP B 198 -1 N TRP B 198 O SER B 272 SHEET 3 AA3 5 SER B 215 CYS B 224 -1 O LEU B 221 N LEU B 197 SHEET 4 AA3 5 HIS B 227 GLY B 236 -1 O LEU B 229 N THR B 222 SHEET 5 AA3 5 ALA B 351 ILE B 360 -1 O ALA B 352 N LEU B 234 SHEET 1 AA4 5 LEU B 261 HIS B 263 0 SHEET 2 AA4 5 SER B 248 PHE B 255 -1 N THR B 254 O LEU B 262 SHEET 3 AA4 5 TYR B 336 THR B 343 -1 O TRP B 342 N LEU B 249 SHEET 4 AA4 5 PRO B 322 PHE B 329 -1 N THR B 328 O SER B 339 SHEET 5 AA4 5 ASN B 308 TYR B 314 -1 N TYR B 309 O VAL B 327 SHEET 1 AA5 6 PHE C 271 ILE C 273 0 SHEET 2 AA5 6 ILE C 172 PRO C 176 1 N GLY C 174 O SER C 272 SHEET 3 AA5 6 ILE C 194 TRP C 198 -1 O THR C 196 N ARG C 175 SHEET 4 AA5 6 SER C 215 CYS C 224 -1 O LEU C 221 N LEU C 197 SHEET 5 AA5 6 HIS C 227 GLY C 236 -1 O HIS C 227 N CYS C 224 SHEET 6 AA5 6 ALA C 351 ILE C 360 -1 O ALA C 352 N LEU C 234 SHEET 1 AA6 5 LEU C 261 HIS C 263 0 SHEET 2 AA6 5 SER C 248 PHE C 255 -1 N THR C 254 O LEU C 262 SHEET 3 AA6 5 TYR C 336 THR C 343 -1 O TYR C 336 N PHE C 255 SHEET 4 AA6 5 PRO C 322 PHE C 329 -1 N THR C 326 O LYS C 341 SHEET 5 AA6 5 ASN C 308 TYR C 314 -1 N TYR C 309 O VAL C 327 LINK O8 SIA S 1 C2 SIA S 2 1555 1555 1.38 LINK O8 SIA S 2 C2 SIA S 3 1555 1555 1.38 CRYST1 63.501 82.245 93.458 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015748 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012159 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010700 0.00000 CONECT 3846 3847 3858 3859 CONECT 3847 3846 3848 3860 3862 CONECT 3848 3847 3849 CONECT 3849 3848 3850 3861 CONECT 3850 3849 3851 3857 CONECT 3851 3850 3852 3862 CONECT 3852 3851 3853 3863 CONECT 3853 3852 3854 3864 CONECT 3854 3853 3865 CONECT 3855 3856 3857 3866 CONECT 3856 3855 CONECT 3857 3850 3855 CONECT 3858 3846 CONECT 3859 3846 CONECT 3860 3847 CONECT 3861 3849 CONECT 3862 3847 3851 CONECT 3863 3852 CONECT 3864 3853 3868 CONECT 3865 3854 CONECT 3866 3855 CONECT 3867 3868 3879 3880 CONECT 3868 3864 3867 3869 3882 CONECT 3869 3868 3870 CONECT 3870 3869 3871 3881 CONECT 3871 3870 3872 3878 CONECT 3872 3871 3873 3882 CONECT 3873 3872 3874 3883 CONECT 3874 3873 3875 3884 CONECT 3875 3874 3885 CONECT 3876 3877 3878 3886 CONECT 3877 3876 CONECT 3878 3871 3876 CONECT 3879 3867 CONECT 3880 3867 CONECT 3881 3870 CONECT 3882 3868 3872 CONECT 3883 3873 CONECT 3884 3874 3888 CONECT 3885 3875 CONECT 3886 3876 CONECT 3887 3888 3899 3900 CONECT 3888 3884 3887 3889 3902 CONECT 3889 3888 3890 CONECT 3890 3889 3891 3901 CONECT 3891 3890 3892 3898 CONECT 3892 3891 3893 3902 CONECT 3893 3892 3894 3903 CONECT 3894 3893 3895 3904 CONECT 3895 3894 3905 CONECT 3896 3897 3898 3906 CONECT 3897 3896 CONECT 3898 3891 3896 CONECT 3899 3887 CONECT 3900 3887 CONECT 3901 3890 CONECT 3902 3888 3892 CONECT 3903 3893 CONECT 3904 3894 CONECT 3905 3895 CONECT 3906 3896 CONECT 3907 3908 3909 CONECT 3908 3907 CONECT 3909 3907 3910 CONECT 3910 3909 CONECT 3911 3912 3913 CONECT 3912 3911 CONECT 3913 3911 3914 CONECT 3914 3913 CONECT 3915 3916 3917 CONECT 3916 3915 CONECT 3917 3915 3918 CONECT 3918 3917 CONECT 3919 3920 3921 CONECT 3920 3919 CONECT 3921 3919 3922 CONECT 3922 3921 CONECT 3923 3924 3925 CONECT 3924 3923 CONECT 3925 3923 3926 CONECT 3926 3925 CONECT 3927 3928 CONECT 3928 3927 3929 3930 3931 CONECT 3929 3928 CONECT 3930 3928 CONECT 3931 3928 3932 CONECT 3932 3931 3933 3934 CONECT 3933 3932 CONECT 3934 3932 CONECT 3935 3936 3937 CONECT 3936 3935 CONECT 3937 3935 3938 CONECT 3938 3937 CONECT 3939 3940 3941 CONECT 3940 3939 CONECT 3941 3939 3942 CONECT 3942 3941 CONECT 3943 3944 3945 CONECT 3944 3943 CONECT 3945 3943 3946 CONECT 3946 3945 CONECT 3947 3948 3949 CONECT 3948 3947 CONECT 3949 3947 3950 CONECT 3950 3949 CONECT 3951 3952 3953 CONECT 3952 3951 CONECT 3953 3951 3954 CONECT 3954 3953 CONECT 3955 3956 3957 CONECT 3956 3955 CONECT 3957 3955 3958 CONECT 3958 3957 MASTER 435 0 15 13 31 0 0 6 4162 3 113 51 END