HEADER VIRUS 20-NOV-25 9TBH TITLE HEPATITIS A VIRUS IN COMPLEX WITH LDLR RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: P1D,VIRION PROTEIN 1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: P1B,VIRION PROTEIN 2; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CAPSID PROTEIN VP3; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: P1C,VIRION PROTEIN 3; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HEPATITIS A VIRUS; SOURCE 3 ORGANISM_TAXID: 208726; SOURCE 4 EXPRESSION_SYSTEM: CHLOROCEBUS AETHIOPS AETHIOPS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 101841; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HUMAN HEPATITIS A VIRUS; SOURCE 8 ORGANISM_TAXID: 208726; SOURCE 9 EXPRESSION_SYSTEM: CHLOROCEBUS AETHIOPS AETHIOPS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 101841; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: HUMAN HEPATITIS A VIRUS; SOURCE 13 ORGANISM_TAXID: 208726; SOURCE 14 EXPRESSION_SYSTEM: CHLOROCEBUS AETHIOPS AETHIOPS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 101841 KEYWDS HEPATITIS A VIRUS GD1A, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR Y.ZHAO,D.STUART,S.M.LEMON,H.DUYVESTEYN,P.SHAH,E.FRY REVDAT 1 18-MAR-26 9TBH 0 JRNL AUTH D.I.STUART,S.M.LEMON JRNL TITL THE LOW DENSITY LIPOPROTEIN RECEPTOR LDLR MEDIATES CELLULAR JRNL TITL 2 ENTRY OF NONENVELOPED HEPATITIS A VIRUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 5WTE REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 1.700 REMARK 3 NUMBER OF PARTICLES : 27762 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9TBH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1292152320. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN HEPATITIS A VIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2600.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 180-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 180-MERIC REMARK 350 SOFTWARE USED: UCSF CHIMERA 1.19_B42556. REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 0.500000 -0.809017 219.09000 REMARK 350 BIOMT2 2 0.500000 -0.809017 -0.309017 354.49506 REMARK 350 BIOMT3 2 -0.809017 -0.309017 -0.500000 573.58506 REMARK 350 BIOMT1 3 0.000000 0.000000 -1.000000 438.17999 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 438.17999 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 -0.309017 0.500000 -0.809017 354.49506 REMARK 350 BIOMT2 4 0.500000 0.809017 0.309017 -135.40506 REMARK 350 BIOMT3 4 0.809017 -0.309017 -0.500000 219.09000 REMARK 350 BIOMT1 5 -0.809017 0.309017 -0.500000 438.17999 REMARK 350 BIOMT2 5 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 5 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 6 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 6 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 6 0.309017 -0.500000 -0.809017 438.17999 REMARK 350 BIOMT1 7 0.309017 -0.500000 -0.809017 438.17999 REMARK 350 BIOMT2 7 -0.500000 -0.809017 0.309017 438.17999 REMARK 350 BIOMT3 7 -0.809017 0.309017 -0.500000 438.17999 REMARK 350 BIOMT1 8 -0.309017 -0.500000 -0.809017 573.58506 REMARK 350 BIOMT2 8 0.500000 -0.809017 0.309017 219.09000 REMARK 350 BIOMT3 8 -0.809017 -0.309017 0.500000 354.49506 REMARK 350 BIOMT1 9 -0.500000 0.809017 -0.309017 219.09000 REMARK 350 BIOMT2 9 -0.809017 -0.309017 0.500000 354.49506 REMARK 350 BIOMT3 9 0.309017 0.500000 0.809017 -135.40506 REMARK 350 BIOMT1 10 0.809017 0.309017 -0.500000 83.68493 REMARK 350 BIOMT2 10 0.309017 0.500000 0.809017 -135.40506 REMARK 350 BIOMT3 10 0.500000 -0.809017 0.309017 219.09000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 11 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.809017 -0.309017 -0.500000 219.09000 REMARK 350 BIOMT2 12 0.309017 -0.500000 0.809017 83.68493 REMARK 350 BIOMT3 12 -0.500000 -0.809017 -0.309017 573.58506 REMARK 350 BIOMT1 13 -0.809017 -0.309017 -0.500000 573.58506 REMARK 350 BIOMT2 13 -0.309017 -0.500000 0.809017 219.09000 REMARK 350 BIOMT3 13 -0.500000 0.809017 0.309017 83.68493 REMARK 350 BIOMT1 14 -0.500000 -0.809017 0.309017 438.17999 REMARK 350 BIOMT2 14 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 14 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 15 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 15 -0.500000 -0.809017 0.309017 438.17999 REMARK 350 BIOMT3 15 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 16 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 16 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 16 -0.500000 -0.809017 0.309017 438.17999 REMARK 350 BIOMT1 17 0.809017 0.309017 0.500000 -135.40506 REMARK 350 BIOMT2 17 -0.309017 -0.500000 0.809017 219.09000 REMARK 350 BIOMT3 17 0.500000 -0.809017 -0.309017 354.49506 REMARK 350 BIOMT1 18 0.000000 -1.000000 0.000000 438.17999 REMARK 350 BIOMT2 18 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 18 -1.000000 0.000000 0.000000 438.17999 REMARK 350 BIOMT1 19 -0.809017 0.309017 0.500000 219.09000 REMARK 350 BIOMT2 19 0.309017 -0.500000 0.809017 83.68493 REMARK 350 BIOMT3 19 0.500000 0.809017 0.309017 -135.40506 REMARK 350 BIOMT1 20 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 20 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 20 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 21 0.309017 -0.500000 0.809017 83.68493 REMARK 350 BIOMT2 21 -0.500000 -0.809017 -0.309017 573.58506 REMARK 350 BIOMT3 21 0.809017 -0.309017 -0.500000 219.09000 REMARK 350 BIOMT1 22 -0.309017 -0.500000 0.809017 219.09000 REMARK 350 BIOMT2 22 -0.500000 0.809017 0.309017 83.68493 REMARK 350 BIOMT3 22 -0.809017 -0.309017 -0.500000 573.58506 REMARK 350 BIOMT1 23 0.500000 -0.809017 0.309017 219.09000 REMARK 350 BIOMT2 23 -0.809017 -0.309017 0.500000 354.49506 REMARK 350 BIOMT3 23 -0.309017 -0.500000 -0.809017 573.58506 REMARK 350 BIOMT1 24 -0.809017 -0.309017 0.500000 354.49506 REMARK 350 BIOMT2 24 0.309017 0.500000 0.809017 -135.40506 REMARK 350 BIOMT3 24 -0.500000 0.809017 -0.309017 219.09000 REMARK 350 BIOMT1 25 0.309017 0.500000 0.809017 -135.40506 REMARK 350 BIOMT2 25 0.500000 -0.809017 0.309017 219.09000 REMARK 350 BIOMT3 25 0.809017 0.309017 -0.500000 83.68493 REMARK 350 BIOMT1 26 0.500000 0.809017 0.309017 -135.40506 REMARK 350 BIOMT2 26 0.809017 -0.309017 -0.500000 219.09000 REMARK 350 BIOMT3 26 -0.309017 0.500000 -0.809017 354.49506 REMARK 350 BIOMT1 27 0.500000 -0.809017 -0.309017 354.49506 REMARK 350 BIOMT2 27 -0.809017 -0.309017 -0.500000 573.58506 REMARK 350 BIOMT3 27 0.309017 0.500000 -0.809017 219.09000 REMARK 350 BIOMT1 28 -1.000000 0.000000 0.000000 438.17999 REMARK 350 BIOMT2 28 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 28 0.000000 0.000000 -1.000000 438.17999 REMARK 350 BIOMT1 29 -0.500000 -0.809017 -0.309017 573.58506 REMARK 350 BIOMT2 29 -0.809017 0.309017 0.500000 219.09000 REMARK 350 BIOMT3 29 -0.309017 0.500000 -0.809017 354.49506 REMARK 350 BIOMT1 30 -0.500000 0.809017 0.309017 83.68493 REMARK 350 BIOMT2 30 0.809017 0.309017 0.500000 -135.40506 REMARK 350 BIOMT3 30 0.309017 0.500000 -0.809017 219.09000 REMARK 350 BIOMT1 31 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 31 0.000000 -1.000000 0.000000 438.17999 REMARK 350 BIOMT3 31 0.000000 0.000000 -1.000000 438.17999 REMARK 350 BIOMT1 32 0.309017 0.500000 -0.809017 219.09000 REMARK 350 BIOMT2 32 -0.500000 0.809017 0.309017 83.68493 REMARK 350 BIOMT3 32 0.809017 0.309017 0.500000 -135.40506 REMARK 350 BIOMT1 33 0.000000 0.000000 -1.000000 438.17999 REMARK 350 BIOMT2 33 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 33 0.000000 -1.000000 0.000000 438.17999 REMARK 350 BIOMT1 34 -0.309017 0.500000 -0.809017 354.49506 REMARK 350 BIOMT2 34 -0.500000 -0.809017 -0.309017 573.58506 REMARK 350 BIOMT3 34 -0.809017 0.309017 0.500000 219.09000 REMARK 350 BIOMT1 35 -0.809017 0.309017 -0.500000 438.17999 REMARK 350 BIOMT2 35 0.309017 -0.500000 -0.809017 438.17999 REMARK 350 BIOMT3 35 -0.500000 -0.809017 0.309017 438.17999 REMARK 350 BIOMT1 36 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 36 -0.809017 0.309017 -0.500000 438.17999 REMARK 350 BIOMT3 36 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 37 0.309017 -0.500000 -0.809017 438.17999 REMARK 350 BIOMT2 37 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 37 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 38 -0.309017 -0.500000 -0.809017 573.58506 REMARK 350 BIOMT2 38 -0.500000 0.809017 -0.309017 219.09000 REMARK 350 BIOMT3 38 0.809017 0.309017 -0.500000 83.68493 REMARK 350 BIOMT1 39 -0.500000 0.809017 -0.309017 219.09000 REMARK 350 BIOMT2 39 0.809017 0.309017 -0.500000 83.68493 REMARK 350 BIOMT3 39 -0.309017 -0.500000 -0.809017 573.58506 REMARK 350 BIOMT1 40 0.809017 0.309017 -0.500000 83.68493 REMARK 350 BIOMT2 40 -0.309017 -0.500000 -0.809017 573.58506 REMARK 350 BIOMT3 40 -0.500000 0.809017 -0.309017 219.09000 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 41 0.000000 0.000000 -1.000000 438.17999 REMARK 350 BIOMT3 41 -1.000000 0.000000 0.000000 438.17999 REMARK 350 BIOMT1 42 0.809017 -0.309017 -0.500000 219.09000 REMARK 350 BIOMT2 42 -0.309017 0.500000 -0.809017 354.49506 REMARK 350 BIOMT3 42 0.500000 0.809017 0.309017 -135.40506 REMARK 350 BIOMT1 43 -0.809017 -0.309017 -0.500000 573.58506 REMARK 350 BIOMT2 43 0.309017 0.500000 -0.809017 219.09000 REMARK 350 BIOMT3 43 0.500000 -0.809017 -0.309017 354.49506 REMARK 350 BIOMT1 44 -0.500000 -0.809017 0.309017 438.17999 REMARK 350 BIOMT2 44 -0.809017 0.309017 -0.500000 438.17999 REMARK 350 BIOMT3 44 0.309017 -0.500000 -0.809017 438.17999 REMARK 350 BIOMT1 45 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 45 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 45 -0.809017 0.309017 -0.500000 438.17999 REMARK 350 BIOMT1 46 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 46 0.309017 -0.500000 -0.809017 438.17999 REMARK 350 BIOMT3 46 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 47 0.809017 0.309017 0.500000 -135.40506 REMARK 350 BIOMT2 47 0.309017 0.500000 -0.809017 219.09000 REMARK 350 BIOMT3 47 -0.500000 0.809017 0.309017 83.68493 REMARK 350 BIOMT1 48 0.000000 -1.000000 0.000000 438.17999 REMARK 350 BIOMT2 48 0.000000 0.000000 -1.000000 438.17999 REMARK 350 BIOMT3 48 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 49 -0.809017 0.309017 0.500000 219.09000 REMARK 350 BIOMT2 49 -0.309017 0.500000 -0.809017 354.49506 REMARK 350 BIOMT3 49 -0.500000 -0.809017 -0.309017 573.58506 REMARK 350 BIOMT1 50 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 50 -1.000000 0.000000 0.000000 438.17999 REMARK 350 BIOMT3 50 0.000000 -1.000000 0.000000 438.17999 REMARK 350 BIOMT1 51 0.309017 -0.500000 0.809017 83.68493 REMARK 350 BIOMT2 51 0.500000 0.809017 0.309017 -135.40506 REMARK 350 BIOMT3 51 -0.809017 0.309017 0.500000 219.09000 REMARK 350 BIOMT1 52 -0.309017 -0.500000 0.809017 219.09000 REMARK 350 BIOMT2 52 0.500000 -0.809017 -0.309017 354.49506 REMARK 350 BIOMT3 52 0.809017 0.309017 0.500000 -135.40506 REMARK 350 BIOMT1 53 0.500000 -0.809017 0.309017 219.09000 REMARK 350 BIOMT2 53 0.809017 0.309017 -0.500000 83.68493 REMARK 350 BIOMT3 53 0.309017 0.500000 0.809017 -135.40506 REMARK 350 BIOMT1 54 -0.809017 -0.309017 0.500000 354.49506 REMARK 350 BIOMT2 54 -0.309017 -0.500000 -0.809017 573.58506 REMARK 350 BIOMT3 54 0.500000 -0.809017 0.309017 219.09000 REMARK 350 BIOMT1 55 0.309017 0.500000 0.809017 -135.40506 REMARK 350 BIOMT2 55 -0.500000 0.809017 -0.309017 219.09000 REMARK 350 BIOMT3 55 -0.809017 -0.309017 0.500000 354.49506 REMARK 350 BIOMT1 56 0.500000 0.809017 0.309017 -135.40506 REMARK 350 BIOMT2 56 -0.809017 0.309017 0.500000 219.09000 REMARK 350 BIOMT3 56 0.309017 -0.500000 0.809017 83.68493 REMARK 350 BIOMT1 57 0.500000 -0.809017 -0.309017 354.49506 REMARK 350 BIOMT2 57 0.809017 0.309017 0.500000 -135.40506 REMARK 350 BIOMT3 57 -0.309017 -0.500000 0.809017 219.09000 REMARK 350 BIOMT1 58 -1.000000 0.000000 0.000000 438.17999 REMARK 350 BIOMT2 58 0.000000 -1.000000 0.000000 438.17999 REMARK 350 BIOMT3 58 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 59 -0.500000 -0.809017 -0.309017 573.58506 REMARK 350 BIOMT2 59 0.809017 -0.309017 -0.500000 219.09000 REMARK 350 BIOMT3 59 0.309017 -0.500000 0.809017 83.68493 REMARK 350 BIOMT1 60 -0.500000 0.809017 0.309017 83.68493 REMARK 350 BIOMT2 60 -0.809017 -0.309017 -0.500000 573.58506 REMARK 350 BIOMT3 60 -0.309017 -0.500000 0.809017 219.09000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 GLY A 2 REMARK 465 ASP A 3 REMARK 465 ASP A 30 REMARK 465 LEU A 31 REMARK 465 LYS A 32 REMARK 465 GLY A 33 REMARK 465 LYS A 34 REMARK 465 ALA A 35 REMARK 465 ASN A 36 REMARK 465 ARG A 37 REMARK 465 GLY A 38 REMARK 465 GLU A 273 REMARK 465 SER A 274 REMARK 465 ASP B 1 REMARK 465 ILE B 2 REMARK 465 GLU B 3 REMARK 465 GLU B 4 REMARK 465 GLN B 222 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 68 139.65 75.74 REMARK 500 SER A 125 -111.94 25.43 REMARK 500 SER B 20 -107.42 57.39 REMARK 500 SER B 134 -138.22 59.59 REMARK 500 ILE B 153 -55.80 -125.01 REMARK 500 SER C 9 -169.66 -79.70 REMARK 500 ASN C 19 151.79 62.41 REMARK 500 ASP C 32 15.11 58.93 REMARK 500 ALA C 235 76.26 63.77 REMARK 500 PRO C 236 158.44 -46.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 44 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-55771 RELATED DB: EMDB REMARK 900 HEPATITIS A VIRUS IN COMPLEX WITH LDLR RECEPTOR DBREF 9TBH A 1 274 UNP P08617 POLG_HAVHM 492 765 DBREF 9TBH B 1 222 UNP P08617 POLG_HAVHM 24 245 DBREF 9TBH C 1 246 UNP P08617 POLG_HAVHM 246 491 SEQADV 9TBH THR C 6 UNP P08617 PHE 251 CONFLICT SEQADV 9TBH THR C 145 UNP P08617 SER 390 CONFLICT SEQADV 9TBH ALA C 163 UNP P08617 THR 408 CONFLICT SEQADV 9TBH GLU C 189 UNP P08617 SER 434 CONFLICT SEQADV 9TBH HIS C 218 UNP P08617 SER 463 CONFLICT SEQRES 1 A 274 VAL GLY ASP ASP SER GLY GLY PHE SER THR THR VAL SER SEQRES 2 A 274 THR GLU GLN ASN VAL PRO ASP PRO GLN VAL GLY ILE THR SEQRES 3 A 274 THR MET LYS ASP LEU LYS GLY LYS ALA ASN ARG GLY LYS SEQRES 4 A 274 MET ASP VAL SER GLY VAL GLN ALA PRO VAL GLY ALA ILE SEQRES 5 A 274 THR THR ILE GLU ASP PRO VAL LEU ALA LYS LYS VAL PRO SEQRES 6 A 274 GLU THR PHE PRO GLU LEU LYS PRO GLY GLU SER ARG HIS SEQRES 7 A 274 THR SER ASP HIS MET SER ILE TYR LYS PHE MET GLY ARG SEQRES 8 A 274 SER HIS PHE LEU CYS THR PHE THR PHE ASN SER ASN ASN SEQRES 9 A 274 LYS GLU TYR THR PHE PRO ILE THR LEU SER SER THR SER SEQRES 10 A 274 ASN PRO PRO HIS GLY LEU PRO SER THR LEU ARG TRP PHE SEQRES 11 A 274 PHE ASN LEU PHE GLN LEU TYR ARG GLY PRO LEU ASP LEU SEQRES 12 A 274 THR ILE ILE ILE THR GLY ALA THR ASP VAL ASP GLY MET SEQRES 13 A 274 ALA TRP PHE THR PRO VAL GLY LEU ALA VAL ASP THR PRO SEQRES 14 A 274 TRP VAL GLU LYS GLU SER ALA LEU SER ILE ASP TYR LYS SEQRES 15 A 274 THR ALA LEU GLY ALA VAL ARG PHE ASN THR ARG ARG THR SEQRES 16 A 274 GLY ASN ILE GLN ILE ARG LEU PRO TRP TYR SER TYR LEU SEQRES 17 A 274 TYR ALA VAL SER GLY ALA LEU ASP GLY LEU GLY ASP LYS SEQRES 18 A 274 THR ASP SER THR PHE GLY LEU VAL SER ILE GLN ILE ALA SEQRES 19 A 274 ASN TYR ASN HIS SER ASP GLU TYR LEU SER PHE SER CYS SEQRES 20 A 274 TYR LEU SER VAL THR GLU GLN SER GLU PHE TYR PHE PRO SEQRES 21 A 274 ARG ALA PRO LEU ASN SER ASN ALA MET LEU SER THR GLU SEQRES 22 A 274 SER SEQRES 1 B 222 ASP ILE GLU GLU GLU GLN MET ILE GLN SER VAL ASP ARG SEQRES 2 B 222 THR ALA VAL THR GLY ALA SER TYR PHE THR SER VAL ASP SEQRES 3 B 222 GLN SER SER VAL HIS THR ALA GLU VAL GLY SER HIS GLN SEQRES 4 B 222 VAL GLU PRO LEU ARG THR SER VAL ASP LYS PRO GLY SER SEQRES 5 B 222 LYS LYS THR GLN GLY GLU LYS PHE PHE LEU ILE HIS SER SEQRES 6 B 222 ALA ASP TRP LEU THR THR HIS ALA LEU PHE HIS GLU VAL SEQRES 7 B 222 ALA LYS LEU ASP VAL VAL LYS LEU LEU TYR ASN GLU GLN SEQRES 8 B 222 PHE ALA VAL GLN GLY LEU LEU ARG TYR HIS THR TYR ALA SEQRES 9 B 222 ARG PHE GLY ILE GLU ILE GLN VAL GLN ILE ASN PRO THR SEQRES 10 B 222 PRO PHE GLN GLN GLY GLY LEU ILE CYS ALA MET VAL PRO SEQRES 11 B 222 GLY ASP GLN SER TYR GLY SER ILE ALA SER LEU THR VAL SEQRES 12 B 222 TYR PRO HIS GLY LEU LEU ASN CYS ASN ILE ASN ASN VAL SEQRES 13 B 222 VAL ARG ILE LYS VAL PRO PHE ILE TYR THR ARG GLY ALA SEQRES 14 B 222 TYR HIS PHE LYS ASP PRO GLN TYR PRO VAL TRP GLU LEU SEQRES 15 B 222 THR ILE ARG VAL TRP SER GLU LEU ASN ILE GLY THR GLY SEQRES 16 B 222 THR SER ALA TYR THR SER LEU ASN VAL LEU ALA ARG PHE SEQRES 17 B 222 THR ASP LEU GLU LEU HIS GLY LEU THR PRO LEU SER THR SEQRES 18 B 222 GLN SEQRES 1 C 246 MET MET ARG ASN GLU THR ARG VAL SER THR THR GLU ASN SEQRES 2 C 246 VAL VAL ASN LEU SER ASN TYR GLU ASP ALA ARG ALA LYS SEQRES 3 C 246 MET SER PHE ALA LEU ASP GLN GLU ASP TRP LYS SER ASP SEQRES 4 C 246 PRO SER GLN GLY GLY GLY ILE LYS ILE THR HIS PHE THR SEQRES 5 C 246 THR TRP THR SER ILE PRO THR LEU ALA ALA GLN PHE PRO SEQRES 6 C 246 PHE ASN ALA SER ASP SER VAL GLY GLN GLN ILE LYS VAL SEQRES 7 C 246 ILE PRO VAL ASP PRO TYR PHE PHE GLN MET THR ASN THR SEQRES 8 C 246 ASN PRO ASP GLN LYS CYS ILE THR ALA LEU ALA SER ILE SEQRES 9 C 246 CYS GLN MET PHE CYS PHE TRP ARG GLY ASP LEU VAL PHE SEQRES 10 C 246 ASP PHE GLN VAL PHE PRO THR LYS TYR HIS SER GLY ARG SEQRES 11 C 246 LEU LEU PHE CYS PHE VAL PRO GLY ASN GLU LEU ILE ASP SEQRES 12 C 246 VAL THR GLY ILE THR LEU LYS GLN ALA THR THR ALA PRO SEQRES 13 C 246 CYS ALA VAL MET ASP ILE ALA GLY VAL GLN SER THR LEU SEQRES 14 C 246 ARG PHE ARG VAL PRO TRP ILE SER ASP THR PRO TYR ARG SEQRES 15 C 246 VAL ASN ARG TYR THR LYS GLU ALA HIS GLN LYS GLY GLU SEQRES 16 C 246 TYR THR ALA ILE GLY LYS LEU ILE VAL TYR CYS TYR ASN SEQRES 17 C 246 ARG LEU THR SER PRO SER ASN VAL ALA HIS HIS VAL ARG SEQRES 18 C 246 VAL ASN VAL TYR LEU SER ALA ILE ASN LEU GLU CYS PHE SEQRES 19 C 246 ALA PRO LEU TYR HIS ALA MET ASP VAL THR THR GLN FORMUL 4 HOH *73(H2 O) HELIX 1 AA1 PRO A 48 GLY A 50 5 3 HELIX 2 AA2 VAL A 59 LYS A 63 5 5 HELIX 3 AA3 SER A 84 MET A 89 1 6 HELIX 4 AA4 PRO A 124 ASN A 132 1 9 HELIX 5 AA5 SER A 178 LEU A 185 1 8 HELIX 6 AA6 GLY A 217 ASP A 223 1 7 HELIX 7 AA7 ASN A 265 MET A 269 5 5 HELIX 8 AA8 SER B 52 GLU B 58 1 7 HELIX 9 AA9 ASP B 82 TYR B 88 1 7 HELIX 10 AB1 VAL B 94 ARG B 99 1 6 HELIX 11 AB2 SER B 137 TYR B 144 5 8 HELIX 12 AB3 ASN C 19 ARG C 24 1 6 HELIX 13 AB4 ALA C 30 GLU C 34 5 5 HELIX 14 AB5 PHE C 51 SER C 56 1 6 HELIX 15 AB6 THR C 99 GLN C 106 1 8 HELIX 16 AB7 THR C 148 THR C 153 1 6 HELIX 17 AB8 ARG C 185 LYS C 188 5 4 SHEET 1 AA1 2 MET A 40 VAL A 42 0 SHEET 2 AA1 2 GLU A 70 LEU A 71 -1 O GLU A 70 N VAL A 42 SHEET 1 AA2 5 ILE A 52 THR A 53 0 SHEET 2 AA2 5 THR C 168 ARG C 172 -1 O THR C 168 N THR A 53 SHEET 3 AA2 5 PHE C 108 PHE C 122 -1 N PHE C 117 O PHE C 171 SHEET 4 AA2 5 HIS C 219 PRO C 236 -1 O SER C 227 N VAL C 116 SHEET 5 AA2 5 THR C 59 ASN C 67 -1 N ALA C 62 O VAL C 224 SHEET 1 AA3 4 ILE A 52 THR A 53 0 SHEET 2 AA3 4 THR C 168 ARG C 172 -1 O THR C 168 N THR A 53 SHEET 3 AA3 4 PHE C 108 PHE C 122 -1 N PHE C 117 O PHE C 171 SHEET 4 AA3 4 ARG C 182 VAL C 183 -1 O ARG C 182 N TRP C 111 SHEET 1 AA4 5 HIS A 93 PHE A 100 0 SHEET 2 AA4 5 LEU A 243 VAL A 251 -1 O PHE A 245 N PHE A 98 SHEET 3 AA4 5 LEU A 141 GLY A 149 -1 N ILE A 146 O SER A 246 SHEET 4 AA4 5 ASN A 197 LEU A 202 -1 O ILE A 200 N LEU A 143 SHEET 5 AA4 5 MET C 27 SER C 28 1 O MET C 27 N ARG A 201 SHEET 1 AA5 5 GLU A 172 LYS A 173 0 SHEET 2 AA5 5 GLU A 106 THR A 112 -1 N GLU A 106 O LYS A 173 SHEET 3 AA5 5 THR A 225 ALA A 234 -1 O PHE A 226 N ILE A 111 SHEET 4 AA5 5 ASP A 154 THR A 160 -1 N MET A 156 O GLN A 232 SHEET 5 AA5 5 ALA A 187 ASN A 191 -1 O PHE A 190 N GLY A 155 SHEET 1 AA6 2 TYR A 137 ARG A 138 0 SHEET 2 AA6 2 GLU A 256 PHE A 257 -1 O GLU A 256 N ARG A 138 SHEET 1 AA7 2 ALA B 15 ALA B 19 0 SHEET 2 AA7 2 PHE B 22 ASP B 26 -1 O ASP B 26 N ALA B 15 SHEET 1 AA8 4 PHE B 61 LEU B 69 0 SHEET 2 AA8 4 TYR B 199 LEU B 216 -1 O THR B 200 N TRP B 68 SHEET 3 AA8 4 HIS B 101 ILE B 114 -1 N ARG B 105 O GLU B 212 SHEET 4 AA8 4 VAL B 156 VAL B 161 -1 O ILE B 159 N ILE B 110 SHEET 1 AA9 4 PHE B 61 LEU B 69 0 SHEET 2 AA9 4 TYR B 199 LEU B 216 -1 O THR B 200 N TRP B 68 SHEET 3 AA9 4 HIS B 101 ILE B 114 -1 N ARG B 105 O GLU B 212 SHEET 4 AA9 4 TYR B 170 HIS B 171 -1 O TYR B 170 N ALA B 104 SHEET 1 AB1 4 GLU B 77 LEU B 81 0 SHEET 2 AB1 4 TRP B 180 ASN B 191 -1 O ILE B 184 N ALA B 79 SHEET 3 AB1 4 GLN B 121 PRO B 130 -1 N ALA B 127 O THR B 183 SHEET 4 AB1 4 HIS B 146 ASN B 150 -1 O LEU B 149 N LEU B 124 SHEET 1 AB2 4 GLN C 75 PRO C 80 0 SHEET 2 AB2 4 GLY C 200 THR C 211 -1 O LEU C 202 N ILE C 79 SHEET 3 AB2 4 SER C 128 PRO C 137 -1 N LEU C 132 O TYR C 205 SHEET 4 AB2 4 CYS C 157 ASP C 161 -1 O ALA C 158 N PHE C 133 SHEET 1 AB3 2 THR C 89 ASN C 90 0 SHEET 2 AB3 2 GLN C 95 LYS C 96 -1 O GLN C 95 N ASN C 90 CISPEP 1 PRO A 119 PRO A 120 0 4.05 CISPEP 2 ASN C 92 PRO C 93 0 1.52 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 344 0 0 17 43 0 0 6 5773 3 0 59 END