HEADER TRANSFERASE 21-NOV-25 9TCL TITLE SHEWANELLA ONEIDENSIS FIC ENZYME SOFIC-L31D:ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ADENYLYLTRANSFERASE SOFIC; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: AMPYLATOR SOFIC; COMPND 5 EC: 2.7.7.108; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: N-TERMINAL GH = REST OF EXPRESSION TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS MR-1; SOURCE 3 ORGANISM_TAXID: 211586; SOURCE 4 GENE: FIC, SO_4266; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TRANSLATION, ELONGATION FACTOR, EF-TU, AMPYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.RUNGE,A.BAUMGART,A.ITZEN,V.POGENBERG REVDAT 1 12-AUG-26 9TCL 0 JRNL AUTH S.RUNGE,V.POGENBERG,A.BAUMGART,B.SIEBELS,H.SCHLUETER,A.ITZEN JRNL TITL THE SHEWANELLA ONEIDENSIS FIC ENZYME SOFIC TARGETS THE JRNL TITL 2 SWITCH-I REGION OF EF-TU FOR AMPYLATION JRNL REF FEBS LETTERS 2026 REMARK 2 REMARK 2 RESOLUTION. 2.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 268.73 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 22314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 1076 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3300 - 5.3200 0.94 2714 145 0.2352 0.2584 REMARK 3 2 5.3200 - 4.2200 0.95 2714 128 0.2252 0.2705 REMARK 3 3 4.2200 - 3.6900 0.95 2643 124 0.2252 0.2299 REMARK 3 4 3.6900 - 3.3500 0.94 2634 148 0.2498 0.3043 REMARK 3 5 3.3500 - 3.1100 0.94 2633 143 0.2699 0.3302 REMARK 3 6 3.1100 - 2.9300 0.96 2674 108 0.2808 0.3420 REMARK 3 7 2.9300 - 2.7800 0.94 2626 136 0.2950 0.3255 REMARK 3 8 2.7800 - 2.6600 0.95 2607 137 0.2897 0.3499 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.909 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5947 REMARK 3 ANGLE : 0.484 8123 REMARK 3 CHIRALITY : 0.037 954 REMARK 3 PLANARITY : 0.004 1028 REMARK 3 DIHEDRAL : 10.694 2169 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1381 -24.6531 1.5486 REMARK 3 T TENSOR REMARK 3 T11: 0.1699 T22: 0.7033 REMARK 3 T33: 0.6711 T12: 0.0364 REMARK 3 T13: 0.0925 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 0.2633 L22: 0.7031 REMARK 3 L33: 0.5401 L12: 0.1068 REMARK 3 L13: -0.2958 L23: -0.1624 REMARK 3 S TENSOR REMARK 3 S11: 0.0006 S12: -0.0647 S13: 0.0250 REMARK 3 S21: 0.0292 S22: -0.0073 S23: -0.1024 REMARK 3 S31: -0.0052 S32: 0.0933 S33: 0.0340 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7691 -5.9995 25.4704 REMARK 3 T TENSOR REMARK 3 T11: 0.1265 T22: 0.7113 REMARK 3 T33: 0.4604 T12: 0.0252 REMARK 3 T13: -0.0358 T23: 0.0783 REMARK 3 L TENSOR REMARK 3 L11: 1.3570 L22: 0.5112 REMARK 3 L33: 0.2219 L12: -0.4289 REMARK 3 L13: 0.0405 L23: 0.0824 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: -0.1066 S13: 0.0378 REMARK 3 S21: 0.0404 S22: 0.0616 S23: 0.0653 REMARK 3 S31: -0.0098 S32: -0.0122 S33: -0.0076 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 94 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4747 -17.2010 22.0215 REMARK 3 T TENSOR REMARK 3 T11: 0.1252 T22: 0.7402 REMARK 3 T33: 0.3091 T12: 0.0209 REMARK 3 T13: -0.0060 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.2983 L22: 0.3568 REMARK 3 L33: 0.1774 L12: 0.3223 REMARK 3 L13: 0.2407 L23: 0.1333 REMARK 3 S TENSOR REMARK 3 S11: 0.0326 S12: 0.0961 S13: -0.1262 REMARK 3 S21: -0.0244 S22: 0.0513 S23: -0.0070 REMARK 3 S31: 0.0043 S32: -0.0192 S33: -0.0005 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 142 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0605 -18.9241 9.8146 REMARK 3 T TENSOR REMARK 3 T11: 0.1463 T22: 0.9330 REMARK 3 T33: 0.3368 T12: -0.0396 REMARK 3 T13: -0.0130 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 1.0490 L22: 0.1606 REMARK 3 L33: 0.2066 L12: 0.1296 REMARK 3 L13: 0.1711 L23: -0.0528 REMARK 3 S TENSOR REMARK 3 S11: 0.0054 S12: 0.1127 S13: -0.0402 REMARK 3 S21: -0.0325 S22: 0.0419 S23: 0.0339 REMARK 3 S31: -0.0003 S32: -0.0342 S33: 0.0054 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 219 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1486 -5.4952 19.3517 REMARK 3 T TENSOR REMARK 3 T11: 0.1181 T22: 0.7670 REMARK 3 T33: 0.2586 T12: 0.0102 REMARK 3 T13: 0.0014 T23: 0.2047 REMARK 3 L TENSOR REMARK 3 L11: 0.3212 L22: 0.0435 REMARK 3 L33: 0.0064 L12: 0.0126 REMARK 3 L13: 0.0335 L23: -0.0099 REMARK 3 S TENSOR REMARK 3 S11: -0.0077 S12: 0.2730 S13: 0.0350 REMARK 3 S21: -0.0586 S22: -0.0033 S23: 0.0126 REMARK 3 S31: -0.0194 S32: 0.0249 S33: 0.0326 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 293 THROUGH 336 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9326 2.5538 49.0451 REMARK 3 T TENSOR REMARK 3 T11: 0.1433 T22: 0.5494 REMARK 3 T33: 0.5984 T12: -0.1144 REMARK 3 T13: 0.0412 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 0.4791 L22: 0.4621 REMARK 3 L33: 0.6276 L12: 0.3176 REMARK 3 L13: -0.0024 L23: 0.1454 REMARK 3 S TENSOR REMARK 3 S11: -0.0215 S12: 0.0370 S13: -0.1154 REMARK 3 S21: 0.0095 S22: -0.0224 S23: 0.0530 REMARK 3 S31: 0.0722 S32: -0.0735 S33: 0.0202 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 337 THROUGH 371 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2331 8.8103 36.8517 REMARK 3 T TENSOR REMARK 3 T11: 0.1442 T22: 0.4898 REMARK 3 T33: 0.5683 T12: 0.0083 REMARK 3 T13: -0.0811 T23: 0.1181 REMARK 3 L TENSOR REMARK 3 L11: 1.6586 L22: 0.6312 REMARK 3 L33: 1.2160 L12: -0.6096 REMARK 3 L13: 0.0175 L23: 0.5177 REMARK 3 S TENSOR REMARK 3 S11: -0.0186 S12: 0.0001 S13: -0.0569 REMARK 3 S21: -0.0006 S22: -0.0252 S23: 0.0617 REMARK 3 S31: -0.0154 S32: -0.0680 S33: 0.0457 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.7900 -6.7299 76.3960 REMARK 3 T TENSOR REMARK 3 T11: 0.2135 T22: 0.9345 REMARK 3 T33: 0.6655 T12: -0.0250 REMARK 3 T13: -0.0461 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 0.1599 L22: 0.1495 REMARK 3 L33: 0.0131 L12: -0.0813 REMARK 3 L13: -0.0438 L23: 0.0120 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: -0.1167 S13: 0.0082 REMARK 3 S21: 0.0343 S22: 0.0211 S23: -0.0221 REMARK 3 S31: -0.0114 S32: -0.0003 S33: -0.0037 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.1769 -24.3587 51.5670 REMARK 3 T TENSOR REMARK 3 T11: 0.0607 T22: 0.5794 REMARK 3 T33: 0.3658 T12: -0.0257 REMARK 3 T13: 0.0252 T23: 0.0658 REMARK 3 L TENSOR REMARK 3 L11: 1.5098 L22: 0.4590 REMARK 3 L33: 0.1062 L12: 0.4626 REMARK 3 L13: 0.1305 L23: 0.1144 REMARK 3 S TENSOR REMARK 3 S11: -0.0083 S12: 0.1180 S13: -0.0412 REMARK 3 S21: -0.0390 S22: 0.0433 S23: 0.1103 REMARK 3 S31: 0.0306 S32: -0.0697 S33: 0.0103 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1266 -13.0293 55.6227 REMARK 3 T TENSOR REMARK 3 T11: 0.1182 T22: 0.6887 REMARK 3 T33: 0.5146 T12: -0.0411 REMARK 3 T13: -0.0284 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.0207 L22: 0.3553 REMARK 3 L33: 0.2513 L12: -0.3318 REMARK 3 L13: 0.0031 L23: 0.1658 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: -0.0502 S13: 0.1525 REMARK 3 S21: 0.0058 S22: 0.0583 S23: 0.0054 REMARK 3 S31: -0.0050 S32: 0.0018 S33: -0.0184 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.3869 -11.1958 70.4496 REMARK 3 T TENSOR REMARK 3 T11: 0.1612 T22: 0.8313 REMARK 3 T33: 0.4661 T12: 0.0131 REMARK 3 T13: 0.0182 T23: -0.1343 REMARK 3 L TENSOR REMARK 3 L11: 1.9242 L22: 0.7521 REMARK 3 L33: 0.3868 L12: -0.0546 REMARK 3 L13: -0.4645 L23: -0.3430 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: -0.0394 S13: -0.0319 REMARK 3 S21: 0.0183 S22: 0.0244 S23: 0.0935 REMARK 3 S31: -0.0143 S32: -0.0397 S33: -0.0181 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 198 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1642 -18.8560 64.4459 REMARK 3 T TENSOR REMARK 3 T11: 0.0883 T22: 0.7282 REMARK 3 T33: 0.2992 T12: -0.0010 REMARK 3 T13: 0.0244 T23: 0.0336 REMARK 3 L TENSOR REMARK 3 L11: 0.3742 L22: 0.1266 REMARK 3 L33: 0.1583 L12: -0.0142 REMARK 3 L13: -0.0954 L23: -0.0433 REMARK 3 S TENSOR REMARK 3 S11: 0.0006 S12: -0.1365 S13: -0.0139 REMARK 3 S21: 0.0356 S22: 0.0105 S23: 0.0254 REMARK 3 S31: 0.0021 S32: -0.0105 S33: 0.0079 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 336 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8814 -30.0636 38.6263 REMARK 3 T TENSOR REMARK 3 T11: 0.0804 T22: 0.6198 REMARK 3 T33: 0.5100 T12: -0.0030 REMARK 3 T13: -0.0265 T23: 0.1009 REMARK 3 L TENSOR REMARK 3 L11: 0.4047 L22: 0.1514 REMARK 3 L33: 0.2109 L12: 0.0147 REMARK 3 L13: 0.1484 L23: 0.1373 REMARK 3 S TENSOR REMARK 3 S11: -0.0553 S12: -0.0112 S13: -0.0962 REMARK 3 S21: -0.0065 S22: -0.0713 S23: 0.1386 REMARK 3 S31: 0.0077 S32: -0.0132 S33: 0.0435 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 337 THROUGH 371 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.0135 -38.6971 39.6818 REMARK 3 T TENSOR REMARK 3 T11: 0.1307 T22: 0.4989 REMARK 3 T33: 0.5353 T12: -0.0527 REMARK 3 T13: -0.0022 T23: 0.1327 REMARK 3 L TENSOR REMARK 3 L11: 1.5914 L22: 0.6463 REMARK 3 L33: 1.0549 L12: 0.3515 REMARK 3 L13: 0.2254 L23: 0.5365 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: 0.0020 S13: -0.0666 REMARK 3 S21: 0.0149 S22: -0.0474 S23: 0.0470 REMARK 3 S31: 0.0358 S32: -0.0559 S33: 0.0645 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 5 through 90 or REMARK 3 (resid 91 through 92 and (name N or name REMARK 3 CA or name C or name O or name CB )) or REMARK 3 resid 93 through 400)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 5 through 94 or REMARK 3 (resid 95 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 96 REMARK 3 through 347 or (resid 348 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 349 through 400)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9TCL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1292152403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-SEP-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.68880 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X CDTE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JUN 30, 2024 REMARK 200 BUILT=20240723 REMARK 200 DATA SCALING SOFTWARE : AIMLESS VERSION 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22338 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.660 REMARK 200 RESOLUTION RANGE LOW (A) : 46.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.24800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 1.11000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.16 M AMMONIUM SULFATE, 0.08 M SODIUM REMARK 280 ACETATE (PH 4.6), 20 % (W/) PEG 4000, 20 % (W/V) GLYCEROL, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.38300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 TRP B 3 REMARK 465 GLN B 4 REMARK 465 LEU B 372 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 TRP A 3 REMARK 465 GLN A 4 REMARK 465 LEU A 372 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 GLN B 7 CG CD OE1 NE2 REMARK 470 HIS B 11 CG ND1 CD2 CE1 NE2 REMARK 470 GLN B 91 CG CD OE1 NE2 REMARK 470 GLN B 148 CG CD OE1 NE2 REMARK 470 ARG B 165 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 178 CG CD OE1 NE2 REMARK 470 GLU B 287 CG CD OE1 OE2 REMARK 470 HIS B 299 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 347 CG CD CE NZ REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 GLN A 7 CG CD OE1 NE2 REMARK 470 HIS A 11 CG ND1 CD2 CE1 NE2 REMARK 470 MET A 95 CG SD CE REMARK 470 GLN A 148 CG CD OE1 NE2 REMARK 470 ARG A 165 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 178 CG CD OE1 NE2 REMARK 470 GLU A 287 CG CD OE1 OE2 REMARK 470 HIS A 299 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 347 CG CD CE NZ REMARK 470 GLU A 348 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 6 -140.61 -86.93 REMARK 500 GLN B 7 16.21 59.80 REMARK 500 ALA B 8 -164.96 55.25 REMARK 500 TYR B 9 54.96 -146.72 REMARK 500 HIS B 11 41.33 -90.64 REMARK 500 ASP B 18 -137.84 -125.11 REMARK 500 THR B 27 -161.19 -126.98 REMARK 500 GLN B 54 178.19 59.93 REMARK 500 GLU B 73 33.27 -94.94 REMARK 500 TYR B 85 42.26 -86.90 REMARK 500 CYS B 119 -159.90 -152.95 REMARK 500 SER B 132 19.16 57.61 REMARK 500 GLN B 134 97.38 -68.90 REMARK 500 PRO B 141 170.68 -59.52 REMARK 500 THR B 146 -163.48 -117.66 REMARK 500 GLN B 148 -61.85 -91.56 REMARK 500 ILE B 154 -51.02 -135.13 REMARK 500 PRO B 225 76.42 -66.96 REMARK 500 LYS B 347 153.71 69.75 REMARK 500 GLU B 348 -175.53 65.91 REMARK 500 GLU A 6 -141.17 -87.03 REMARK 500 GLN A 7 15.76 59.44 REMARK 500 ALA A 8 -164.76 55.33 REMARK 500 TYR A 9 55.67 -146.37 REMARK 500 HIS A 11 40.76 -91.25 REMARK 500 ASP A 18 -136.78 -125.39 REMARK 500 THR A 27 -162.40 -127.29 REMARK 500 GLN A 54 178.06 60.04 REMARK 500 GLU A 73 32.08 -95.20 REMARK 500 TYR A 85 42.01 -87.24 REMARK 500 CYS A 119 -159.20 -153.33 REMARK 500 SER A 132 18.97 57.52 REMARK 500 GLN A 134 97.84 -69.24 REMARK 500 PRO A 141 170.65 -59.62 REMARK 500 THR A 146 -163.79 -117.60 REMARK 500 GLN A 148 -61.87 -91.45 REMARK 500 ILE A 154 -51.31 -135.20 REMARK 500 PRO A 225 75.81 -67.24 REMARK 500 LYS A 347 153.88 70.15 REMARK 500 GLU A 348 -175.30 65.83 REMARK 500 REMARK 500 REMARK: NULL DBREF 9TCL B 1 372 UNP Q8E9K5 SOFIC_SHEON 1 372 DBREF 9TCL A 1 372 UNP Q8E9K5 SOFIC_SHEON 1 372 SEQADV 9TCL GLY B -1 UNP Q8E9K5 EXPRESSION TAG SEQADV 9TCL HIS B 0 UNP Q8E9K5 EXPRESSION TAG SEQADV 9TCL ASP B 31 UNP Q8E9K5 LEU 31 ENGINEERED MUTATION SEQADV 9TCL GLY A -1 UNP Q8E9K5 EXPRESSION TAG SEQADV 9TCL HIS A 0 UNP Q8E9K5 EXPRESSION TAG SEQADV 9TCL ASP A 31 UNP Q8E9K5 LEU 31 ENGINEERED MUTATION SEQRES 1 B 374 GLY HIS MET GLU TRP GLN ALA GLU GLN ALA TYR ASN HIS SEQRES 2 B 374 LEU PRO PRO LEU PRO LEU ASP SER LYS LEU ALA GLU LEU SEQRES 3 B 374 ALA GLU THR LEU PRO ILE ASP LYS ALA CYS ILE PRO ALA SEQRES 4 B 374 ARG ALA ALA LEU ALA GLU LEU LYS GLN ALA GLY GLU LEU SEQRES 5 B 374 LEU PRO ASN GLN GLY LEU LEU ILE ASN LEU LEU PRO LEU SEQRES 6 B 374 LEU GLU ALA GLN GLY SER SER GLU ILE GLU ASN ILE VAL SEQRES 7 B 374 THR THR THR ASP LYS LEU PHE GLN TYR ALA GLN GLU ASP SEQRES 8 B 374 SER GLN ALA ASP PRO MET THR LYS GLU ALA LEU ARG TYR SEQRES 9 B 374 ARG THR ALA LEU TYR GLN GLY PHE THR GLN LEU SER ASN SEQRES 10 B 374 ARG PRO LEU CYS VAL THR THR ALA LEU GLU ILE CYS SER SEQRES 11 B 374 THR ILE LYS SER VAL GLN MET ASP VAL ARG LYS VAL PRO SEQRES 12 B 374 GLY THR SER LEU THR ASN GLN ALA THR GLY GLU VAL ILE SEQRES 13 B 374 TYR THR PRO PRO ALA GLY GLU SER VAL ILE ARG ASP LEU SEQRES 14 B 374 LEU SER ASN TRP GLU ALA PHE LEU HIS ASN GLN ASP ASP SEQRES 15 B 374 VAL ASP PRO LEU ILE LYS MET ALA MET ALA HIS TYR GLN SEQRES 16 B 374 PHE GLU ALA ILE HIS PRO PHE ILE ASP GLY ASN GLY ARG SEQRES 17 B 374 THR GLY ARG VAL LEU ASN ILE LEU TYR LEU ILE ASP GLN SEQRES 18 B 374 GLN LEU LEU SER ALA PRO ILE LEU TYR LEU SER ARG TYR SEQRES 19 B 374 ILE VAL ALA HIS LYS GLN ASP TYR TYR ARG LEU LEU LEU SEQRES 20 B 374 ASN VAL THR THR GLN GLN GLU TRP GLN PRO TRP ILE ILE SEQRES 21 B 374 PHE ILE LEU ASN ALA VAL GLU GLN THR ALA LYS TRP THR SEQRES 22 B 374 THR HIS LYS ILE ALA ALA ALA ARG GLU LEU ILE ALA HIS SEQRES 23 B 374 THR THR GLU TYR VAL ARG GLN GLN LEU PRO LYS ILE TYR SEQRES 24 B 374 SER HIS GLU LEU VAL GLN VAL ILE PHE GLU GLN PRO TYR SEQRES 25 B 374 CYS ARG ILE GLN ASN LEU VAL GLU SER GLY LEU ALA LYS SEQRES 26 B 374 ARG GLN THR ALA SER VAL TYR LEU LYS GLN LEU CYS ASP SEQRES 27 B 374 ILE GLY VAL LEU GLU GLU VAL GLN SER GLY LYS GLU LYS SEQRES 28 B 374 LEU PHE VAL HIS PRO LYS PHE VAL THR LEU MET THR LYS SEQRES 29 B 374 ASP SER ASN GLN PHE SER ARG TYR ALA LEU SEQRES 1 A 374 GLY HIS MET GLU TRP GLN ALA GLU GLN ALA TYR ASN HIS SEQRES 2 A 374 LEU PRO PRO LEU PRO LEU ASP SER LYS LEU ALA GLU LEU SEQRES 3 A 374 ALA GLU THR LEU PRO ILE ASP LYS ALA CYS ILE PRO ALA SEQRES 4 A 374 ARG ALA ALA LEU ALA GLU LEU LYS GLN ALA GLY GLU LEU SEQRES 5 A 374 LEU PRO ASN GLN GLY LEU LEU ILE ASN LEU LEU PRO LEU SEQRES 6 A 374 LEU GLU ALA GLN GLY SER SER GLU ILE GLU ASN ILE VAL SEQRES 7 A 374 THR THR THR ASP LYS LEU PHE GLN TYR ALA GLN GLU ASP SEQRES 8 A 374 SER GLN ALA ASP PRO MET THR LYS GLU ALA LEU ARG TYR SEQRES 9 A 374 ARG THR ALA LEU TYR GLN GLY PHE THR GLN LEU SER ASN SEQRES 10 A 374 ARG PRO LEU CYS VAL THR THR ALA LEU GLU ILE CYS SER SEQRES 11 A 374 THR ILE LYS SER VAL GLN MET ASP VAL ARG LYS VAL PRO SEQRES 12 A 374 GLY THR SER LEU THR ASN GLN ALA THR GLY GLU VAL ILE SEQRES 13 A 374 TYR THR PRO PRO ALA GLY GLU SER VAL ILE ARG ASP LEU SEQRES 14 A 374 LEU SER ASN TRP GLU ALA PHE LEU HIS ASN GLN ASP ASP SEQRES 15 A 374 VAL ASP PRO LEU ILE LYS MET ALA MET ALA HIS TYR GLN SEQRES 16 A 374 PHE GLU ALA ILE HIS PRO PHE ILE ASP GLY ASN GLY ARG SEQRES 17 A 374 THR GLY ARG VAL LEU ASN ILE LEU TYR LEU ILE ASP GLN SEQRES 18 A 374 GLN LEU LEU SER ALA PRO ILE LEU TYR LEU SER ARG TYR SEQRES 19 A 374 ILE VAL ALA HIS LYS GLN ASP TYR TYR ARG LEU LEU LEU SEQRES 20 A 374 ASN VAL THR THR GLN GLN GLU TRP GLN PRO TRP ILE ILE SEQRES 21 A 374 PHE ILE LEU ASN ALA VAL GLU GLN THR ALA LYS TRP THR SEQRES 22 A 374 THR HIS LYS ILE ALA ALA ALA ARG GLU LEU ILE ALA HIS SEQRES 23 A 374 THR THR GLU TYR VAL ARG GLN GLN LEU PRO LYS ILE TYR SEQRES 24 A 374 SER HIS GLU LEU VAL GLN VAL ILE PHE GLU GLN PRO TYR SEQRES 25 A 374 CYS ARG ILE GLN ASN LEU VAL GLU SER GLY LEU ALA LYS SEQRES 26 A 374 ARG GLN THR ALA SER VAL TYR LEU LYS GLN LEU CYS ASP SEQRES 27 A 374 ILE GLY VAL LEU GLU GLU VAL GLN SER GLY LYS GLU LYS SEQRES 28 A 374 LEU PHE VAL HIS PRO LYS PHE VAL THR LEU MET THR LYS SEQRES 29 A 374 ASP SER ASN GLN PHE SER ARG TYR ALA LEU HET ATP B 400 31 HET ATP A 400 31 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 5 HOH *47(H2 O) HELIX 1 AA1 SER B 19 GLU B 26 1 8 HELIX 2 AA2 THR B 27 LEU B 50 1 24 HELIX 3 AA3 GLY B 55 LEU B 60 1 6 HELIX 4 AA4 LEU B 60 GLU B 73 1 14 HELIX 5 AA5 THR B 78 TYR B 85 1 8 HELIX 6 AA6 ASP B 93 LEU B 113 1 21 HELIX 7 AA7 CYS B 119 SER B 132 1 14 HELIX 8 AA8 GLY B 160 HIS B 176 1 17 HELIX 9 AA9 ASP B 182 HIS B 198 1 17 HELIX 10 AB1 GLY B 203 GLN B 219 1 17 HELIX 11 AB2 LEU B 229 HIS B 236 1 8 HELIX 12 AB3 HIS B 236 THR B 249 1 14 HELIX 13 AB4 GLU B 252 LEU B 293 1 42 HELIX 14 AB5 SER B 298 GLN B 308 1 11 HELIX 15 AB6 ILE B 313 GLU B 318 1 6 HELIX 16 AB7 LYS B 323 ILE B 337 1 15 HELIX 17 AB8 HIS B 353 LYS B 362 1 10 HELIX 18 AB9 SER A 19 GLU A 26 1 8 HELIX 19 AC1 THR A 27 LEU A 50 1 24 HELIX 20 AC2 GLY A 55 LEU A 60 1 6 HELIX 21 AC3 LEU A 60 GLU A 73 1 14 HELIX 22 AC4 THR A 78 TYR A 85 1 8 HELIX 23 AC5 ASP A 93 LEU A 113 1 21 HELIX 24 AC6 CYS A 119 SER A 132 1 14 HELIX 25 AC7 GLY A 160 HIS A 176 1 17 HELIX 26 AC8 ASP A 182 HIS A 198 1 17 HELIX 27 AC9 GLY A 203 GLN A 219 1 17 HELIX 28 AD1 LEU A 229 HIS A 236 1 8 HELIX 29 AD2 HIS A 236 THR A 249 1 14 HELIX 30 AD3 GLU A 252 LEU A 293 1 42 HELIX 31 AD4 SER A 298 GLN A 308 1 11 HELIX 32 AD5 ILE A 313 GLU A 318 1 6 HELIX 33 AD6 LYS A 323 ILE A 337 1 15 HELIX 34 AD7 HIS A 353 LYS A 362 1 10 SHEET 1 AA1 3 TYR B 310 CYS B 311 0 SHEET 2 AA1 3 LYS B 349 VAL B 352 -1 O PHE B 351 N CYS B 311 SHEET 3 AA1 3 GLU B 341 GLN B 344 -1 N GLU B 341 O VAL B 352 SHEET 1 AA2 3 TYR A 310 CYS A 311 0 SHEET 2 AA2 3 LYS A 349 VAL A 352 -1 O PHE A 351 N CYS A 311 SHEET 3 AA2 3 GLU A 341 GLN A 344 -1 N GLU A 341 O VAL A 352 CRYST1 42.881 58.766 155.166 90.00 90.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023320 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017017 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006445 0.00000 MTRIX1 1 0.999989 0.000486 -0.004766 -21.31732 1 MTRIX2 1 0.000270 -0.998980 -0.045154 -27.94831 1 MTRIX3 1 -0.004783 0.045152 -0.998969 78.33457 1 CONECT 5766 5767 5768 5769 5773 CONECT 5767 5766 CONECT 5768 5766 CONECT 5769 5766 CONECT 5770 5771 5772 5773 5777 CONECT 5771 5770 CONECT 5772 5770 CONECT 5773 5766 5770 CONECT 5774 5775 5776 5777 5778 CONECT 5775 5774 CONECT 5776 5774 CONECT 5777 5770 5774 CONECT 5778 5774 5779 CONECT 5779 5778 5780 CONECT 5780 5779 5781 5782 CONECT 5781 5780 5786 CONECT 5782 5780 5783 5784 CONECT 5783 5782 CONECT 5784 5782 5785 5786 CONECT 5785 5784 CONECT 5786 5781 5784 5787 CONECT 5787 5786 5788 5796 CONECT 5788 5787 5789 CONECT 5789 5788 5790 CONECT 5790 5789 5791 5796 CONECT 5791 5790 5792 5793 CONECT 5792 5791 CONECT 5793 5791 5794 CONECT 5794 5793 5795 CONECT 5795 5794 5796 CONECT 5796 5787 5790 5795 CONECT 5797 5798 5799 5800 5804 CONECT 5798 5797 CONECT 5799 5797 CONECT 5800 5797 CONECT 5801 5802 5803 5804 5808 CONECT 5802 5801 CONECT 5803 5801 CONECT 5804 5797 5801 CONECT 5805 5806 5807 5808 5809 CONECT 5806 5805 CONECT 5807 5805 CONECT 5808 5801 5805 CONECT 5809 5805 5810 CONECT 5810 5809 5811 CONECT 5811 5810 5812 5813 CONECT 5812 5811 5817 CONECT 5813 5811 5814 5815 CONECT 5814 5813 CONECT 5815 5813 5816 5817 CONECT 5816 5815 CONECT 5817 5812 5815 5818 CONECT 5818 5817 5819 5827 CONECT 5819 5818 5820 CONECT 5820 5819 5821 CONECT 5821 5820 5822 5827 CONECT 5822 5821 5823 5824 CONECT 5823 5822 CONECT 5824 5822 5825 CONECT 5825 5824 5826 CONECT 5826 5825 5827 CONECT 5827 5818 5821 5826 MASTER 529 0 2 34 6 0 0 9 5872 2 62 58 END