HEADER PROTEIN BINDING 15-DEC-25 9TMP TITLE CRYSTAL STRUCTURE OF NATIVE CYTOCHROME B562 IN COMPLEX WITH THE TITLE 2 SYNTHETIC ANTI-BRIL ANTIBODY BAG2. COMPND MOL_ID: 1; COMPND 2 MOLECULE: SOLUBLE CYTOCHROME B562; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOCHROME B-562; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTI-BRIL ANTIBODY - HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ANTI-BRIL ANTIBODY - LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI BL21; SOURCE 3 ORGANISM_TAXID: 511693; SOURCE 4 STRAIN: T7 EXPRESS; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 7 ORGANISM_TAXID: 32630; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 3; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CYTOCHROME, FAB, BRIL, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR B.F.COOPER,G.L.ISOM REVDAT 1 25-MAR-26 9TMP 0 JRNL AUTH B.F.COOPER,G.L.ISOM JRNL TITL OPTIMIZED BACTERIAL EXPRESSION OF A SYNTHETIC BRIL ANTIBODY JRNL REF ACTA CRYST. 2026 JRNL DOI 10.1107/S2053230X26001548 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 3 NUMBER OF REFLECTIONS : 19286 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.230 REMARK 3 FREE R VALUE TEST SET COUNT : 1008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.2800 - 5.0700 1.00 2881 156 0.1667 0.1852 REMARK 3 2 5.0700 - 4.0200 1.00 2836 164 0.1714 0.2149 REMARK 3 3 4.0200 - 3.5200 1.00 2852 154 0.2299 0.2569 REMARK 3 4 3.5100 - 3.1900 1.00 2814 171 0.2786 0.2943 REMARK 3 5 3.1900 - 2.9600 1.00 2855 153 0.3452 0.4364 REMARK 3 6 2.9600 - 2.7900 1.00 2819 154 0.3628 0.3929 REMARK 3 7 2.7900 - 2.6500 0.42 1221 56 0.3969 0.4303 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.525 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 40.342 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 97.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 109.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4250 REMARK 3 ANGLE : 0.922 5799 REMARK 3 CHIRALITY : 0.050 644 REMARK 3 PLANARITY : 0.010 741 REMARK 3 DIHEDRAL : 13.995 1506 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0729 39.1227 -40.0184 REMARK 3 T TENSOR REMARK 3 T11: 1.3985 T22: 2.0514 REMARK 3 T33: 0.8124 T12: 0.4041 REMARK 3 T13: -0.1958 T23: 0.0976 REMARK 3 L TENSOR REMARK 3 L11: 8.2751 L22: 3.1136 REMARK 3 L33: 5.3616 L12: 4.7176 REMARK 3 L13: -2.3450 L23: -2.7245 REMARK 3 S TENSOR REMARK 3 S11: -0.4849 S12: 3.0408 S13: 0.3166 REMARK 3 S21: -1.9518 S22: 1.5632 S23: 0.6119 REMARK 3 S31: 0.9382 S32: -0.2655 S33: -0.9054 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7870 28.8973 -33.4774 REMARK 3 T TENSOR REMARK 3 T11: 0.9725 T22: 1.5556 REMARK 3 T33: 0.9492 T12: 0.1620 REMARK 3 T13: -0.0857 T23: -0.2963 REMARK 3 L TENSOR REMARK 3 L11: 3.0060 L22: 6.3496 REMARK 3 L33: 5.3458 L12: 1.1165 REMARK 3 L13: -0.0179 L23: -3.7963 REMARK 3 S TENSOR REMARK 3 S11: 0.3201 S12: 2.3727 S13: -1.0019 REMARK 3 S21: -1.2708 S22: -0.1527 S23: 0.0361 REMARK 3 S31: 1.0736 S32: -1.0046 S33: -0.0915 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9476 31.3943 -29.3901 REMARK 3 T TENSOR REMARK 3 T11: 0.9269 T22: 1.2573 REMARK 3 T33: 0.7210 T12: 0.4680 REMARK 3 T13: -0.0315 T23: -0.0876 REMARK 3 L TENSOR REMARK 3 L11: 7.3594 L22: 7.2556 REMARK 3 L33: 6.9012 L12: -0.3566 REMARK 3 L13: -1.7050 L23: 0.5898 REMARK 3 S TENSOR REMARK 3 S11: 0.8362 S12: 1.4948 S13: -0.6718 REMARK 3 S21: -0.9854 S22: -1.4101 S23: -0.0919 REMARK 3 S31: -0.2108 S32: -0.6332 S33: 0.5078 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.0494 37.2956 -37.3783 REMARK 3 T TENSOR REMARK 3 T11: 1.1093 T22: 1.8547 REMARK 3 T33: 0.8632 T12: 0.5014 REMARK 3 T13: 0.0268 T23: 0.0551 REMARK 3 L TENSOR REMARK 3 L11: 9.5452 L22: 3.2886 REMARK 3 L33: 8.8590 L12: 5.4614 REMARK 3 L13: 0.8416 L23: 1.7377 REMARK 3 S TENSOR REMARK 3 S11: 0.0281 S12: 2.5428 S13: 0.0969 REMARK 3 S21: -1.5302 S22: 0.2038 S23: -0.2992 REMARK 3 S31: 0.3854 S32: -0.0529 S33: -0.2103 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 3 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1570 41.0980 -6.8493 REMARK 3 T TENSOR REMARK 3 T11: 0.6709 T22: 0.5004 REMARK 3 T33: 0.5589 T12: -0.0474 REMARK 3 T13: 0.0652 T23: 0.0645 REMARK 3 L TENSOR REMARK 3 L11: 8.1021 L22: 4.6493 REMARK 3 L33: 4.5621 L12: -2.2691 REMARK 3 L13: -2.4580 L23: 2.1303 REMARK 3 S TENSOR REMARK 3 S11: 0.2399 S12: 0.0031 S13: 0.0080 REMARK 3 S21: 0.1787 S22: -0.2958 S23: 0.1341 REMARK 3 S31: 0.1894 S32: 0.0431 S33: 0.0751 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 126 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9461 36.5246 18.4112 REMARK 3 T TENSOR REMARK 3 T11: 0.7700 T22: 0.5064 REMARK 3 T33: 0.8081 T12: -0.0621 REMARK 3 T13: 0.0851 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 4.3636 L22: 7.8914 REMARK 3 L33: 8.3173 L12: -0.4229 REMARK 3 L13: -0.1847 L23: 0.0328 REMARK 3 S TENSOR REMARK 3 S11: -0.0734 S12: -0.3785 S13: -1.2274 REMARK 3 S21: 0.5033 S22: 0.0702 S23: -0.3613 REMARK 3 S31: 1.1438 S32: 0.1370 S33: -0.1012 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7769 30.3443 -18.4477 REMARK 3 T TENSOR REMARK 3 T11: 0.8719 T22: 0.9533 REMARK 3 T33: 0.7314 T12: -0.2905 REMARK 3 T13: 0.0555 T23: -0.2192 REMARK 3 L TENSOR REMARK 3 L11: 7.5066 L22: 5.4555 REMARK 3 L33: 5.9781 L12: -1.2513 REMARK 3 L13: 0.6194 L23: -1.2642 REMARK 3 S TENSOR REMARK 3 S11: 0.1127 S12: 0.4970 S13: -0.3145 REMARK 3 S21: -0.2511 S22: 0.0156 S23: 1.4201 REMARK 3 S31: 1.1013 S32: -1.6846 S33: -0.1517 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 27 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5273 27.8998 -15.3282 REMARK 3 T TENSOR REMARK 3 T11: 0.6821 T22: 0.7441 REMARK 3 T33: 0.7495 T12: -0.1005 REMARK 3 T13: 0.0175 T23: -0.1830 REMARK 3 L TENSOR REMARK 3 L11: 7.7523 L22: 5.9705 REMARK 3 L33: 7.9511 L12: 2.1265 REMARK 3 L13: -2.0939 L23: -0.1586 REMARK 3 S TENSOR REMARK 3 S11: 0.1020 S12: 0.8576 S13: -0.7865 REMARK 3 S21: 0.0832 S22: -0.3621 S23: 0.5163 REMARK 3 S31: 1.1621 S32: -0.9525 S33: 0.2387 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 105 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0503 24.7368 -1.7934 REMARK 3 T TENSOR REMARK 3 T11: 1.4821 T22: 1.3815 REMARK 3 T33: 1.5268 T12: -0.5988 REMARK 3 T13: 0.4891 T23: -0.2515 REMARK 3 L TENSOR REMARK 3 L11: 1.2060 L22: 0.0665 REMARK 3 L33: 6.8159 L12: 0.2979 REMARK 3 L13: -2.8867 L23: -0.6934 REMARK 3 S TENSOR REMARK 3 S11: -0.8967 S12: 0.6611 S13: -1.4016 REMARK 3 S21: 0.9500 S22: -0.2911 S23: -0.2153 REMARK 3 S31: 2.2461 S32: -3.3222 S33: 1.1609 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 116 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9732 40.6945 23.3534 REMARK 3 T TENSOR REMARK 3 T11: 1.2960 T22: 1.0203 REMARK 3 T33: 1.0697 T12: -0.5043 REMARK 3 T13: 0.3797 T23: 0.0882 REMARK 3 L TENSOR REMARK 3 L11: 5.5485 L22: 5.7382 REMARK 3 L33: 3.9223 L12: 5.1927 REMARK 3 L13: 4.6182 L23: 4.4836 REMARK 3 S TENSOR REMARK 3 S11: 0.2841 S12: -1.2717 S13: -1.2670 REMARK 3 S21: 0.7297 S22: -0.6205 S23: -0.4040 REMARK 3 S31: 1.2879 S32: -1.4284 S33: 0.1057 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 131 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4538 35.8750 10.0883 REMARK 3 T TENSOR REMARK 3 T11: 0.9558 T22: 1.1268 REMARK 3 T33: 1.0668 T12: -0.3642 REMARK 3 T13: 0.1354 T23: -0.0948 REMARK 3 L TENSOR REMARK 3 L11: 2.9516 L22: 7.5274 REMARK 3 L33: 4.5424 L12: 4.6561 REMARK 3 L13: 0.6205 L23: 0.4880 REMARK 3 S TENSOR REMARK 3 S11: 0.2545 S12: 0.4310 S13: -0.0221 REMARK 3 S21: -0.3292 S22: -0.6389 S23: 0.1562 REMARK 3 S31: 0.4666 S32: -1.0344 S33: 0.3871 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 153 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1594 35.6846 7.6046 REMARK 3 T TENSOR REMARK 3 T11: 0.9828 T22: 1.2001 REMARK 3 T33: 1.2042 T12: -0.3667 REMARK 3 T13: 0.0605 T23: -0.0293 REMARK 3 L TENSOR REMARK 3 L11: 4.6728 L22: 9.4315 REMARK 3 L33: 5.1758 L12: -6.2036 REMARK 3 L13: -2.2957 L23: 5.1234 REMARK 3 S TENSOR REMARK 3 S11: -0.2831 S12: 0.1451 S13: -1.4632 REMARK 3 S21: 0.0008 S22: -0.2732 S23: 1.3672 REMARK 3 S31: 0.6503 S32: -0.6228 S33: 0.5737 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 177 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.8639 47.2405 19.8882 REMARK 3 T TENSOR REMARK 3 T11: 0.9520 T22: 1.0594 REMARK 3 T33: 1.1207 T12: -0.2619 REMARK 3 T13: 0.2257 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 3.1610 L22: 9.7299 REMARK 3 L33: 6.6286 L12: -1.0337 REMARK 3 L13: -0.1217 L23: 7.9347 REMARK 3 S TENSOR REMARK 3 S11: -0.7934 S12: -0.3253 S13: -0.1764 REMARK 3 S21: 0.7180 S22: -0.1841 S23: 1.3555 REMARK 3 S31: 0.4590 S32: 0.0569 S33: 0.9295 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 191 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3045 35.8108 16.3924 REMARK 3 T TENSOR REMARK 3 T11: 1.2016 T22: 1.2038 REMARK 3 T33: 1.2828 T12: -0.4353 REMARK 3 T13: 0.4177 T23: -0.2480 REMARK 3 L TENSOR REMARK 3 L11: 3.0847 L22: 6.2184 REMARK 3 L33: 4.8702 L12: 1.0084 REMARK 3 L13: -3.8944 L23: -1.3812 REMARK 3 S TENSOR REMARK 3 S11: -0.0760 S12: 0.1991 S13: -0.0069 REMARK 3 S21: 0.4460 S22: -0.6695 S23: 1.7207 REMARK 3 S31: 0.8477 S32: -0.8116 S33: 0.8691 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9TMP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-DEC-25. REMARK 100 THE DEPOSITION ID IS D_1292153017. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAY-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21369 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 76.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.66 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MOPS/HEPES-NA PH 7.5, 0.03M REMARK 280 BROMIDE, 0.03M FLUORIDE, 0.03M IMIDAZOLE, 12.5% W/V PEG 1000, REMARK 280 12.5% W/V PEG 3350, 12.5% V/V MPD, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.35333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 54.17667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 81.26500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.08833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 135.44167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 LYS A 3 REMARK 465 SER A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 6 REMARK 465 ALA A 7 REMARK 465 ILE A 8 REMARK 465 LEU A 9 REMARK 465 ALA A 10 REMARK 465 VAL A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PHE A 16 REMARK 465 SER A 17 REMARK 465 SER A 18 REMARK 465 ALA A 19 REMARK 465 SER A 20 REMARK 465 PHE A 21 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 ASP A 24 REMARK 465 ARG A 128 REMARK 465 GLU H 1 REMARK 465 ILE H 2 REMARK 465 SER H 229 REMARK 465 GLY L 214 REMARK 465 GLU L 215 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 32 CG CD1 CD2 REMARK 470 LYS A 37 CG CD CE NZ REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 THR A 66 OG1 CG2 REMARK 470 LYS A 69 CG CD CE NZ REMARK 470 ASP A 72 CG OD1 OD2 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 LEU A 116 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP H 158 62.56 62.72 REMARK 500 SER L 31 -130.50 63.41 REMARK 500 ALA L 52 -13.63 77.45 REMARK 500 ALA L 85 170.06 176.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 124 NE2 REMARK 620 2 HEM A 201 NA 81.2 REMARK 620 3 HEM A 201 NB 75.6 86.8 REMARK 620 4 HEM A 201 NC 103.4 175.1 92.7 REMARK 620 5 HEM A 201 ND 108.4 89.0 173.7 91.1 REMARK 620 N 1 2 3 4 DBREF 9TMP A 1 128 UNP P0ABE7 C562_ECOLX 1 128 DBREF 9TMP H 1 229 PDB 9TMP 9TMP 1 229 DBREF 9TMP L 1 215 PDB 9TMP 9TMP 1 215 SEQRES 1 A 128 MET ARG LYS SER LEU LEU ALA ILE LEU ALA VAL SER SER SEQRES 2 A 128 LEU VAL PHE SER SER ALA SER PHE ALA ALA ASP LEU GLU SEQRES 3 A 128 ASP ASN MET GLU THR LEU ASN ASP ASN LEU LYS VAL ILE SEQRES 4 A 128 GLU LYS ALA ASP ASN ALA ALA GLN VAL LYS ASP ALA LEU SEQRES 5 A 128 THR LYS MET ARG ALA ALA ALA LEU ASP ALA GLN LYS ALA SEQRES 6 A 128 THR PRO PRO LYS LEU GLU ASP LYS SER PRO ASP SER PRO SEQRES 7 A 128 GLU MET LYS ASP PHE ARG HIS GLY PHE ASP ILE LEU VAL SEQRES 8 A 128 GLY GLN ILE ASP ASP ALA LEU LYS LEU ALA ASN GLU GLY SEQRES 9 A 128 LYS VAL LYS GLU ALA GLN ALA ALA ALA GLU GLN LEU LYS SEQRES 10 A 128 THR THR ARG ASN ALA TYR HIS GLN LYS TYR ARG SEQRES 1 H 229 GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 H 229 LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 H 229 ALA SER GLY PHE ASN VAL VAL ASP PHE SER LEU HIS TRP SEQRES 4 H 229 VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SEQRES 5 H 229 TYR ILE SER SER SER SER GLY SER THR SER TYR ALA ASP SEQRES 6 H 229 SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SER SEQRES 7 H 229 LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG ALA SEQRES 8 H 229 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG TRP GLY TYR SEQRES 9 H 229 TRP PRO GLY GLU PRO TRP TRP LYS ALA PHE ASP TYR TRP SEQRES 10 H 229 GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 H 229 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 H 229 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 H 229 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 H 229 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 H 229 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 229 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 H 229 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 H 229 ASP LYS LYS VAL GLU PRO LYS SER SEQRES 1 L 215 SER ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER SEQRES 2 L 215 ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SEQRES 3 L 215 SER GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN SEQRES 4 L 215 LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SEQRES 5 L 215 SER SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 L 215 SER ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 L 215 LEU GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SEQRES 8 L 215 TYR LEU TYR TYR SER LEU VAL THR PHE GLY GLN GLY THR SEQRES 9 L 215 LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 L 215 PHE ILE PHE PRO PRO SER ASP SER GLN LEU LYS SER GLY SEQRES 11 L 215 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 L 215 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 L 215 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 L 215 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 L 215 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 L 215 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 L 215 LYS SER PHE ASN ARG GLY GLU HET HEM A 201 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 4 HEM C34 H32 FE N4 O4 FORMUL 5 HOH *(H2 O) HELIX 1 AA1 LEU A 25 LYS A 41 1 17 HELIX 2 AA2 ASN A 44 ALA A 65 1 22 HELIX 3 AA3 PRO A 67 GLU A 71 5 5 HELIX 4 AA4 SER A 77 GLY A 104 1 28 HELIX 5 AA5 LYS A 105 GLN A 115 1 11 HELIX 6 AA6 GLN A 115 TYR A 127 1 13 HELIX 7 AA7 ASN H 31 ASP H 34 5 4 HELIX 8 AA8 ARG H 90 THR H 94 5 5 HELIX 9 AA9 GLY H 107 LYS H 112 1 6 HELIX 10 AB1 SER H 142 SER H 146 5 5 HELIX 11 AB2 SER H 201 GLN H 206 1 6 HELIX 12 AB3 LYS H 215 ASN H 218 5 4 HELIX 13 AB4 GLN L 80 PHE L 84 5 5 HELIX 14 AB5 SER L 123 LYS L 128 1 6 HELIX 15 AB6 LYS L 185 HIS L 191 1 7 SHEET 1 AA1 4 GLN H 6 GLU H 9 0 SHEET 2 AA1 4 LEU H 21 SER H 28 -1 O ALA H 26 N VAL H 8 SHEET 3 AA1 4 THR H 81 MET H 86 -1 O MET H 86 N LEU H 21 SHEET 4 AA1 4 PHE H 71 ASP H 76 -1 N ASP H 76 O THR H 81 SHEET 1 AA2 6 LEU H 14 VAL H 15 0 SHEET 2 AA2 6 THR H 121 VAL H 125 1 O THR H 124 N VAL H 15 SHEET 3 AA2 6 ALA H 95 TRP H 102 -1 N TYR H 97 O THR H 121 SHEET 4 AA2 6 SER H 36 GLN H 42 -1 N HIS H 38 O ALA H 100 SHEET 5 AA2 6 LEU H 48 SER H 55 -1 O VAL H 51 N TRP H 39 SHEET 6 AA2 6 THR H 61 TYR H 63 -1 O SER H 62 N TYR H 53 SHEET 1 AA3 4 LEU H 14 VAL H 15 0 SHEET 2 AA3 4 THR H 121 VAL H 125 1 O THR H 124 N VAL H 15 SHEET 3 AA3 4 ALA H 95 TRP H 102 -1 N TYR H 97 O THR H 121 SHEET 4 AA3 4 ALA H 113 TRP H 117 -1 O TYR H 116 N ARG H 101 SHEET 1 AA4 4 SER H 134 LEU H 138 0 SHEET 2 AA4 4 ALA H 150 TYR H 159 -1 O LEU H 155 N PHE H 136 SHEET 3 AA4 4 TYR H 190 VAL H 198 -1 O TYR H 190 N TYR H 159 SHEET 4 AA4 4 VAL H 177 THR H 179 -1 N HIS H 178 O VAL H 195 SHEET 1 AA5 4 SER H 134 LEU H 138 0 SHEET 2 AA5 4 ALA H 150 TYR H 159 -1 O LEU H 155 N PHE H 136 SHEET 3 AA5 4 TYR H 190 VAL H 198 -1 O TYR H 190 N TYR H 159 SHEET 4 AA5 4 VAL H 183 LEU H 184 -1 N VAL H 183 O SER H 191 SHEET 1 AA6 3 THR H 165 TRP H 168 0 SHEET 2 AA6 3 ILE H 209 HIS H 214 -1 O ASN H 213 N THR H 165 SHEET 3 AA6 3 THR H 219 LYS H 224 -1 O THR H 219 N HIS H 214 SHEET 1 AA7 4 MET L 5 SER L 8 0 SHEET 2 AA7 4 VAL L 20 ALA L 26 -1 O ARG L 25 N THR L 6 SHEET 3 AA7 4 ASP L 71 ILE L 76 -1 O ILE L 76 N VAL L 20 SHEET 4 AA7 4 PHE L 63 SER L 68 -1 N SER L 68 O ASP L 71 SHEET 1 AA8 6 SER L 11 SER L 15 0 SHEET 2 AA8 6 THR L 104 LYS L 109 1 O GLU L 107 N LEU L 12 SHEET 3 AA8 6 THR L 86 GLN L 91 -1 N TYR L 87 O THR L 104 SHEET 4 AA8 6 VAL L 34 GLN L 39 -1 N TYR L 37 O TYR L 88 SHEET 5 AA8 6 LYS L 46 TYR L 50 -1 O LEU L 48 N TRP L 36 SHEET 6 AA8 6 SER L 54 LEU L 55 -1 O SER L 54 N TYR L 50 SHEET 1 AA9 4 SER L 11 SER L 15 0 SHEET 2 AA9 4 THR L 104 LYS L 109 1 O GLU L 107 N LEU L 12 SHEET 3 AA9 4 THR L 86 GLN L 91 -1 N TYR L 87 O THR L 104 SHEET 4 AA9 4 THR L 99 PHE L 100 -1 O THR L 99 N GLN L 91 SHEET 1 AB1 4 SER L 116 PHE L 120 0 SHEET 2 AB1 4 THR L 131 PHE L 141 -1 O LEU L 137 N PHE L 118 SHEET 3 AB1 4 TYR L 175 SER L 184 -1 O SER L 179 N CYS L 136 SHEET 4 AB1 4 SER L 161 VAL L 165 -1 N SER L 164 O SER L 178 SHEET 1 AB2 3 LYS L 147 VAL L 152 0 SHEET 2 AB2 3 VAL L 193 THR L 199 -1 O ALA L 195 N LYS L 151 SHEET 3 AB2 3 VAL L 207 ASN L 212 -1 O VAL L 207 N VAL L 198 SSBOND 1 CYS H 25 CYS H 99 1555 1555 2.04 SSBOND 2 CYS H 154 CYS H 210 1555 1555 2.06 SSBOND 3 CYS L 24 CYS L 89 1555 1555 2.06 SSBOND 4 CYS L 136 CYS L 196 1555 1555 2.05 LINK NE2 HIS A 124 FE HEM A 201 1555 1555 2.15 CISPEP 1 TRP H 105 PRO H 106 0 6.20 CISPEP 2 PHE H 160 PRO H 161 0 -13.21 CISPEP 3 GLU H 162 PRO H 163 0 5.09 CISPEP 4 SER L 8 PRO L 9 0 0.31 CISPEP 5 TYR L 142 PRO L 143 0 -1.47 CRYST1 88.730 88.730 162.530 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011270 0.006507 0.000000 0.00000 SCALE2 0.000000 0.013014 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006153 0.00000 CONECT 1423 4861 CONECT 1637 2209 CONECT 2209 1637 CONECT 2620 3034 CONECT 3034 2620 CONECT 3349 3846 CONECT 3846 3349 CONECT 4206 4685 CONECT 4685 4206 CONECT 4819 4823 4850 CONECT 4820 4826 4833 CONECT 4821 4836 4840 CONECT 4822 4843 4847 CONECT 4823 4819 4824 4857 CONECT 4824 4823 4825 4828 CONECT 4825 4824 4826 4827 CONECT 4826 4820 4825 4857 CONECT 4827 4825 CONECT 4828 4824 4829 CONECT 4829 4828 4830 CONECT 4830 4829 4831 4832 CONECT 4831 4830 CONECT 4832 4830 CONECT 4833 4820 4834 4858 CONECT 4834 4833 4835 4837 CONECT 4835 4834 4836 4838 CONECT 4836 4821 4835 4858 CONECT 4837 4834 CONECT 4838 4835 4839 CONECT 4839 4838 CONECT 4840 4821 4841 4859 CONECT 4841 4840 4842 4844 CONECT 4842 4841 4843 4845 CONECT 4843 4822 4842 4859 CONECT 4844 4841 CONECT 4845 4842 4846 CONECT 4846 4845 CONECT 4847 4822 4848 4860 CONECT 4848 4847 4849 4851 CONECT 4849 4848 4850 4852 CONECT 4850 4819 4849 4860 CONECT 4851 4848 CONECT 4852 4849 4853 CONECT 4853 4852 4854 CONECT 4854 4853 4855 4856 CONECT 4855 4854 CONECT 4856 4854 CONECT 4857 4823 4826 4861 CONECT 4858 4833 4836 4861 CONECT 4859 4840 4843 4861 CONECT 4860 4847 4850 4861 CONECT 4861 1423 4857 4858 4859 CONECT 4861 4860 MASTER 500 0 1 15 46 0 0 6 4144 3 53 45 END