HEADER ANTIMICROBIAL PROTEIN 17-DEC-25 9TOU TITLE ROOM TEMPERATURE SERIAL AMPC UNCOMPLEXED RESTING STATE FROM PAL-XFEL COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CEPHALOSPORINASE,CSASE; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: AMPC, AMPA, B4150, JW4111; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ANTIBIOTIC RESISTANCE, BETA-LACTAMASE, INHIBITOR, DYNAMICS, TR-SFX, KEYWDS 2 XFEL, ANTIMICROBIAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.HINCHLIFFE,E.I.FREEMAN,P.A.LANG,P.RABE,J.G.A.KAMPS,P.ALLER, AUTHOR 2 C.J.SCHOFIELD,A.M.ORVILLE REVDAT 1 17-JUN-26 9TOU 0 JRNL AUTH J.J.A.G.KAMPS,P.HINCHLIFFE,J.GLERUP,E.I.FREEMAN,P.A.LANG, JRNL AUTH 2 C.L.TOOKE,M.BEER,L.PARKINSON,D.H.GU,S.PARK,N.DEVENISH, JRNL AUTH 3 T.ZHOU,A.SHILOVA,S.KAUR,P.RABE,C.J.SCHOFIELD,J.SPENCER, JRNL AUTH 4 J.PARK,R.L.OWEN,A.M.ORVILLE,P.ALLER JRNL TITL DROP-ON-FIXED-TARGET REACTION INITIATION APPROACH FOR SERIAL JRNL TITL 2 AND TIME-RESOLVED CRYSTALLOGRAPHY. JRNL REF IUCRJ 2026 JRNL REFN ESSN 2052-2525 JRNL PMID 42246252 JRNL DOI 10.1107/S2052252526003489 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.2_3874: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 65413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 3241 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.2500 - 5.3400 1.00 2810 137 0.1903 0.2026 REMARK 3 2 5.3400 - 4.2400 1.00 2727 150 0.1368 0.1726 REMARK 3 3 4.2400 - 3.7100 1.00 2740 130 0.1283 0.1603 REMARK 3 4 3.7100 - 3.3700 1.00 2719 148 0.1499 0.1795 REMARK 3 5 3.3700 - 3.1300 1.00 2724 135 0.1711 0.2233 REMARK 3 6 3.1300 - 2.9400 1.00 2736 127 0.1877 0.2493 REMARK 3 7 2.9400 - 2.7900 1.00 2717 142 0.1793 0.2184 REMARK 3 8 2.7900 - 2.6700 1.00 2705 127 0.1781 0.2201 REMARK 3 9 2.6700 - 2.5700 1.00 2705 155 0.1894 0.2189 REMARK 3 10 2.5700 - 2.4800 1.00 2700 147 0.1814 0.2425 REMARK 3 11 2.4800 - 2.4000 1.00 2714 132 0.1935 0.2268 REMARK 3 12 2.4000 - 2.3400 1.00 2656 164 0.1998 0.2867 REMARK 3 13 2.3400 - 2.2700 1.00 2717 135 0.1990 0.2482 REMARK 3 14 2.2700 - 2.2200 1.00 2664 162 0.2038 0.2447 REMARK 3 15 2.2200 - 2.1700 1.00 2705 154 0.2107 0.2638 REMARK 3 16 2.1700 - 2.1200 1.00 2710 135 0.2210 0.2665 REMARK 3 17 2.1200 - 2.0800 1.00 2678 142 0.2297 0.2645 REMARK 3 18 2.0800 - 2.0400 1.00 2698 128 0.2423 0.2899 REMARK 3 19 2.0400 - 2.0000 1.00 2705 128 0.2578 0.2920 REMARK 3 20 2.0000 - 1.9700 0.99 2666 139 0.2789 0.3128 REMARK 3 21 1.9700 - 1.9400 1.00 2670 165 0.2723 0.3253 REMARK 3 22 1.9400 - 1.9100 0.98 2653 146 0.3098 0.2976 REMARK 3 23 1.9100 - 1.8800 0.98 2653 113 0.3328 0.3708 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5766 REMARK 3 ANGLE : 0.850 7884 REMARK 3 CHIRALITY : 0.054 856 REMARK 3 PLANARITY : 0.006 1014 REMARK 3 DIHEDRAL : 13.934 2088 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7978 -10.6650 20.5345 REMARK 3 T TENSOR REMARK 3 T11: 0.1794 T22: 0.1784 REMARK 3 T33: 0.1999 T12: -0.0163 REMARK 3 T13: -0.0235 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 2.4096 L22: 1.2714 REMARK 3 L33: 1.3146 L12: 0.8570 REMARK 3 L13: -0.8156 L23: -0.1922 REMARK 3 S TENSOR REMARK 3 S11: -0.0577 S12: -0.0419 S13: -0.1846 REMARK 3 S21: 0.0593 S22: 0.0178 S23: 0.0987 REMARK 3 S31: 0.1931 S32: -0.1329 S33: 0.0549 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3122 15.8449 6.1942 REMARK 3 T TENSOR REMARK 3 T11: 0.2159 T22: 0.1920 REMARK 3 T33: 0.1797 T12: -0.0231 REMARK 3 T13: 0.0061 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 1.2451 L22: 2.1575 REMARK 3 L33: 2.3425 L12: -0.7701 REMARK 3 L13: 0.1514 L23: -0.3607 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: 0.2087 S13: 0.1109 REMARK 3 S21: -0.2752 S22: 0.0563 S23: -0.0311 REMARK 3 S31: -0.1836 S32: 0.0509 S33: -0.0498 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.0990 2.9523 8.2002 REMARK 3 T TENSOR REMARK 3 T11: 0.1670 T22: 0.2152 REMARK 3 T33: 0.1434 T12: -0.0037 REMARK 3 T13: -0.0011 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 1.1202 L22: 2.2783 REMARK 3 L33: 1.0547 L12: 0.2520 REMARK 3 L13: 0.0024 L23: 0.2362 REMARK 3 S TENSOR REMARK 3 S11: -0.0435 S12: 0.1389 S13: -0.0500 REMARK 3 S21: -0.2410 S22: 0.0769 S23: -0.1495 REMARK 3 S31: 0.0147 S32: 0.0245 S33: -0.0317 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 193 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0287 -6.0806 11.9419 REMARK 3 T TENSOR REMARK 3 T11: 0.1720 T22: 0.1459 REMARK 3 T33: 0.1333 T12: 0.0002 REMARK 3 T13: 0.0159 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 2.1767 L22: 2.6056 REMARK 3 L33: 2.0917 L12: 1.2305 REMARK 3 L13: -0.0653 L23: -0.3258 REMARK 3 S TENSOR REMARK 3 S11: -0.0347 S12: 0.0746 S13: -0.2226 REMARK 3 S21: -0.1007 S22: 0.0685 S23: 0.0309 REMARK 3 S31: 0.1583 S32: 0.0357 S33: -0.0291 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 256 THROUGH 361 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5200 1.8012 27.1779 REMARK 3 T TENSOR REMARK 3 T11: 0.2179 T22: 0.2295 REMARK 3 T33: 0.1848 T12: 0.0028 REMARK 3 T13: -0.0060 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 1.1207 L22: 2.2712 REMARK 3 L33: 0.2964 L12: 1.0156 REMARK 3 L13: -0.1197 L23: 0.1209 REMARK 3 S TENSOR REMARK 3 S11: 0.0950 S12: -0.1336 S13: 0.0134 REMARK 3 S21: 0.3209 S22: -0.0858 S23: -0.0090 REMARK 3 S31: -0.0190 S32: 0.0011 S33: 0.0013 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 75.3904 -8.1402 19.1647 REMARK 3 T TENSOR REMARK 3 T11: 0.2362 T22: 0.2105 REMARK 3 T33: 0.1980 T12: 0.0037 REMARK 3 T13: 0.0071 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.6881 L22: 1.5894 REMARK 3 L33: 1.0681 L12: -0.5561 REMARK 3 L13: -0.5887 L23: 0.2663 REMARK 3 S TENSOR REMARK 3 S11: 0.0024 S12: 0.1560 S13: -0.1541 REMARK 3 S21: -0.1848 S22: -0.0297 S23: -0.1159 REMARK 3 S31: 0.0534 S32: 0.0527 S33: 0.0139 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.9243 13.7466 36.6701 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.1976 REMARK 3 T33: 0.1664 T12: 0.0083 REMARK 3 T13: 0.0086 T23: -0.0307 REMARK 3 L TENSOR REMARK 3 L11: 2.1645 L22: 2.9263 REMARK 3 L33: 2.0826 L12: 0.4088 REMARK 3 L13: -0.2845 L23: 0.3397 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: -0.1996 S13: 0.1294 REMARK 3 S21: 0.2354 S22: 0.0222 S23: 0.1233 REMARK 3 S31: -0.0485 S32: 0.0761 S33: -0.0369 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 163 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.1573 -1.2062 25.8262 REMARK 3 T TENSOR REMARK 3 T11: 0.1950 T22: 0.1936 REMARK 3 T33: 0.1720 T12: -0.0188 REMARK 3 T13: 0.0090 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 1.6818 L22: 1.8472 REMARK 3 L33: 0.7286 L12: -0.6151 REMARK 3 L13: 0.1954 L23: -0.0153 REMARK 3 S TENSOR REMARK 3 S11: -0.0282 S12: 0.0182 S13: -0.0656 REMARK 3 S21: 0.0115 S22: -0.0050 S23: 0.0273 REMARK 3 S31: 0.0822 S32: 0.0119 S33: 0.0251 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 311 THROUGH 361 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.7349 -0.8639 15.0612 REMARK 3 T TENSOR REMARK 3 T11: 0.2162 T22: 0.1956 REMARK 3 T33: 0.1785 T12: -0.0032 REMARK 3 T13: 0.0108 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.9605 L22: 2.3048 REMARK 3 L33: 2.5757 L12: -0.8126 REMARK 3 L13: -0.0107 L23: -0.1300 REMARK 3 S TENSOR REMARK 3 S11: 0.0692 S12: 0.2056 S13: 0.0734 REMARK 3 S21: -0.2886 S22: -0.1707 S23: -0.0569 REMARK 3 S31: -0.0139 S32: -0.1129 S33: 0.1068 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9TOU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-DEC-25. REMARK 100 THE DEPOSITION ID IS D_1292151423. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-24 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : NCI REMARK 200 X-RAY GENERATOR MODEL : PAL-XFEL BEAMLINE NCI REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.3042 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65589 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 88.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 25.53 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.1860 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 17.35 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.539 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM PHOSPHATE (1.9 M, PH 8.8) REMARK 280 WITH CRYSTAL SEED, BATCH MODE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 59.35550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.82350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 59.35550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.82350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 692 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN B 285 REMARK 465 GLY B 286 REMARK 465 SER B 287 REMARK 465 ASP B 288 REMARK 465 ASN B 289 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4 PO4 B 401 O HOH B 501 2.02 REMARK 500 O THR A 42 O HOH A 501 2.04 REMARK 500 O HOH A 648 O HOH A 691 2.06 REMARK 500 O HOH A 513 O HOH A 648 2.12 REMARK 500 O HOH A 551 O HOH A 695 2.12 REMARK 500 O HOH A 648 O HOH A 681 2.14 REMARK 500 O3 PO4 B 401 O HOH B 502 2.18 REMARK 500 O HOH A 662 O HOH A 668 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 178 -62.84 -124.74 REMARK 500 TYR A 221 30.92 -156.90 REMARK 500 ASN A 341 46.44 -94.80 REMARK 500 VAL B 178 -61.57 -122.63 REMARK 500 TYR B 221 31.04 -155.71 REMARK 500 ASN B 341 46.98 -96.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 740 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH A 741 DISTANCE = 7.15 ANGSTROMS REMARK 525 HOH A 742 DISTANCE = 7.33 ANGSTROMS REMARK 525 HOH B 700 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH B 701 DISTANCE = 7.17 ANGSTROMS REMARK 525 HOH B 702 DISTANCE = 7.30 ANGSTROMS DBREF 9TOU A 4 361 UNP P00811 AMPC_ECOLI 20 377 DBREF 9TOU B 4 361 UNP P00811 AMPC_ECOLI 20 377 SEQRES 1 A 358 ALA PRO GLN GLN ILE ASN ASP ILE VAL HIS ARG THR ILE SEQRES 2 A 358 THR PRO LEU ILE GLU GLN GLN LYS ILE PRO GLY MET ALA SEQRES 3 A 358 VAL ALA VAL ILE TYR GLN GLY LYS PRO TYR TYR PHE THR SEQRES 4 A 358 TRP GLY TYR ALA ASP ILE ALA LYS LYS GLN PRO VAL THR SEQRES 5 A 358 GLN GLN THR LEU PHE GLU LEU GLY SER VAL SER LYS THR SEQRES 6 A 358 PHE THR GLY VAL LEU GLY GLY ASP ALA ILE ALA ARG GLY SEQRES 7 A 358 GLU ILE LYS LEU SER ASP PRO THR THR LYS TYR TRP PRO SEQRES 8 A 358 GLU LEU THR ALA LYS GLN TRP ASN GLY ILE THR LEU LEU SEQRES 9 A 358 HIS LEU ALA THR TYR THR ALA GLY GLY LEU PRO LEU GLN SEQRES 10 A 358 VAL PRO ASP GLU VAL LYS SER SER SER ASP LEU LEU ARG SEQRES 11 A 358 PHE TYR GLN ASN TRP GLN PRO ALA TRP ALA PRO GLY THR SEQRES 12 A 358 GLN ARG LEU TYR ALA ASN SER SER ILE GLY LEU PHE GLY SEQRES 13 A 358 ALA LEU ALA VAL LYS PRO SER GLY LEU SER PHE GLU GLN SEQRES 14 A 358 ALA MET GLN THR ARG VAL PHE GLN PRO LEU LYS LEU ASN SEQRES 15 A 358 HIS THR TRP ILE ASN VAL PRO PRO ALA GLU GLU LYS ASN SEQRES 16 A 358 TYR ALA TRP GLY TYR ARG GLU GLY LYS ALA VAL HIS VAL SEQRES 17 A 358 SER PRO GLY ALA LEU ASP ALA GLU ALA TYR GLY VAL LYS SEQRES 18 A 358 SER THR ILE GLU ASP MET ALA ARG TRP VAL GLN SER ASN SEQRES 19 A 358 LEU LYS PRO LEU ASP ILE ASN GLU LYS THR LEU GLN GLN SEQRES 20 A 358 GLY ILE GLN LEU ALA GLN SER ARG TYR TRP GLN THR GLY SEQRES 21 A 358 ASP MET TYR GLN GLY LEU GLY TRP GLU MET LEU ASP TRP SEQRES 22 A 358 PRO VAL ASN PRO ASP SER ILE ILE ASN GLY SER ASP ASN SEQRES 23 A 358 LYS ILE ALA LEU ALA ALA ARG PRO VAL LYS ALA ILE THR SEQRES 24 A 358 PRO PRO THR PRO ALA VAL ARG ALA SER TRP VAL HIS LYS SEQRES 25 A 358 THR GLY ALA THR GLY GLY PHE GLY SER TYR VAL ALA PHE SEQRES 26 A 358 ILE PRO GLU LYS GLU LEU GLY ILE VAL MET LEU ALA ASN SEQRES 27 A 358 LYS ASN TYR PRO ASN PRO ALA ARG VAL ASP ALA ALA TRP SEQRES 28 A 358 GLN ILE LEU ASN ALA LEU GLN SEQRES 1 B 358 ALA PRO GLN GLN ILE ASN ASP ILE VAL HIS ARG THR ILE SEQRES 2 B 358 THR PRO LEU ILE GLU GLN GLN LYS ILE PRO GLY MET ALA SEQRES 3 B 358 VAL ALA VAL ILE TYR GLN GLY LYS PRO TYR TYR PHE THR SEQRES 4 B 358 TRP GLY TYR ALA ASP ILE ALA LYS LYS GLN PRO VAL THR SEQRES 5 B 358 GLN GLN THR LEU PHE GLU LEU GLY SER VAL SER LYS THR SEQRES 6 B 358 PHE THR GLY VAL LEU GLY GLY ASP ALA ILE ALA ARG GLY SEQRES 7 B 358 GLU ILE LYS LEU SER ASP PRO THR THR LYS TYR TRP PRO SEQRES 8 B 358 GLU LEU THR ALA LYS GLN TRP ASN GLY ILE THR LEU LEU SEQRES 9 B 358 HIS LEU ALA THR TYR THR ALA GLY GLY LEU PRO LEU GLN SEQRES 10 B 358 VAL PRO ASP GLU VAL LYS SER SER SER ASP LEU LEU ARG SEQRES 11 B 358 PHE TYR GLN ASN TRP GLN PRO ALA TRP ALA PRO GLY THR SEQRES 12 B 358 GLN ARG LEU TYR ALA ASN SER SER ILE GLY LEU PHE GLY SEQRES 13 B 358 ALA LEU ALA VAL LYS PRO SER GLY LEU SER PHE GLU GLN SEQRES 14 B 358 ALA MET GLN THR ARG VAL PHE GLN PRO LEU LYS LEU ASN SEQRES 15 B 358 HIS THR TRP ILE ASN VAL PRO PRO ALA GLU GLU LYS ASN SEQRES 16 B 358 TYR ALA TRP GLY TYR ARG GLU GLY LYS ALA VAL HIS VAL SEQRES 17 B 358 SER PRO GLY ALA LEU ASP ALA GLU ALA TYR GLY VAL LYS SEQRES 18 B 358 SER THR ILE GLU ASP MET ALA ARG TRP VAL GLN SER ASN SEQRES 19 B 358 LEU LYS PRO LEU ASP ILE ASN GLU LYS THR LEU GLN GLN SEQRES 20 B 358 GLY ILE GLN LEU ALA GLN SER ARG TYR TRP GLN THR GLY SEQRES 21 B 358 ASP MET TYR GLN GLY LEU GLY TRP GLU MET LEU ASP TRP SEQRES 22 B 358 PRO VAL ASN PRO ASP SER ILE ILE ASN GLY SER ASP ASN SEQRES 23 B 358 LYS ILE ALA LEU ALA ALA ARG PRO VAL LYS ALA ILE THR SEQRES 24 B 358 PRO PRO THR PRO ALA VAL ARG ALA SER TRP VAL HIS LYS SEQRES 25 B 358 THR GLY ALA THR GLY GLY PHE GLY SER TYR VAL ALA PHE SEQRES 26 B 358 ILE PRO GLU LYS GLU LEU GLY ILE VAL MET LEU ALA ASN SEQRES 27 B 358 LYS ASN TYR PRO ASN PRO ALA ARG VAL ASP ALA ALA TRP SEQRES 28 B 358 GLN ILE LEU ASN ALA LEU GLN HET CL A 401 1 HET PO4 B 401 5 HETNAM CL CHLORIDE ION HETNAM PO4 PHOSPHATE ION FORMUL 3 CL CL 1- FORMUL 4 PO4 O4 P 3- FORMUL 5 HOH *444(H2 O) HELIX 1 AA1 PRO A 5 LYS A 24 1 20 HELIX 2 AA2 VAL A 65 ARG A 80 1 16 HELIX 3 AA3 PRO A 88 TYR A 92 5 5 HELIX 4 AA4 ALA A 98 ASN A 102 5 5 HELIX 5 AA5 THR A 105 THR A 111 1 7 HELIX 6 AA6 SER A 127 TRP A 138 1 12 HELIX 7 AA7 ALA A 151 VAL A 163 1 13 HELIX 8 AA8 SER A 169 VAL A 178 1 10 HELIX 9 AA9 PRO A 192 TYR A 199 5 8 HELIX 10 AB1 LEU A 216 GLY A 222 1 7 HELIX 11 AB2 THR A 226 LYS A 239 1 14 HELIX 12 AB3 PRO A 240 ILE A 243 5 4 HELIX 13 AB4 GLU A 245 GLN A 256 1 12 HELIX 14 AB5 ASN A 279 SER A 287 1 9 HELIX 15 AB6 ASP A 288 LEU A 293 1 6 HELIX 16 AB7 PRO A 330 GLU A 333 5 4 HELIX 17 AB8 PRO A 345 GLN A 361 1 17 HELIX 18 AB9 PRO B 5 LYS B 24 1 20 HELIX 19 AC1 VAL B 65 ARG B 80 1 16 HELIX 20 AC2 PRO B 88 TYR B 92 5 5 HELIX 21 AC3 ALA B 98 ASN B 102 5 5 HELIX 22 AC4 THR B 105 THR B 111 1 7 HELIX 23 AC5 SER B 127 TRP B 138 1 12 HELIX 24 AC6 ALA B 151 VAL B 163 1 13 HELIX 25 AC7 SER B 169 VAL B 178 1 10 HELIX 26 AC8 PRO B 192 TYR B 199 5 8 HELIX 27 AC9 LEU B 216 GLY B 222 1 7 HELIX 28 AD1 THR B 226 LYS B 239 1 14 HELIX 29 AD2 PRO B 240 ILE B 243 5 4 HELIX 30 AD3 GLU B 245 GLN B 256 1 12 HELIX 31 AD4 ASN B 279 ILE B 284 1 6 HELIX 32 AD5 PRO B 330 GLU B 333 5 4 HELIX 33 AD6 PRO B 345 LEU B 360 1 16 SHEET 1 AA110 GLN A 52 PRO A 53 0 SHEET 2 AA110 LYS A 37 ASP A 47 -1 N ALA A 46 O GLN A 52 SHEET 3 AA110 GLY A 27 TYR A 34 -1 N VAL A 30 O PHE A 41 SHEET 4 AA110 LEU A 334 ALA A 340 -1 O LEU A 339 N ALA A 29 SHEET 5 AA110 GLY A 323 ILE A 329 -1 N ILE A 329 O LEU A 334 SHEET 6 AA110 SER A 311 ALA A 318 -1 N GLY A 317 O SER A 324 SHEET 7 AA110 GLU A 272 ASP A 275 -1 N GLU A 272 O HIS A 314 SHEET 8 AA110 MET A 265 GLN A 267 -1 N TYR A 266 O MET A 273 SHEET 9 AA110 ARG A 258 THR A 262 -1 N TYR A 259 O GLN A 267 SHEET 10 AA110 LYS A 299 THR A 305 -1 O LYS A 299 N GLN A 261 SHEET 1 AA2 2 PHE A 60 GLU A 61 0 SHEET 2 AA2 2 LYS A 224 SER A 225 -1 O SER A 225 N PHE A 60 SHEET 1 AA3 2 GLN A 147 ARG A 148 0 SHEET 2 AA3 2 ARG A 296 PRO A 297 -1 O ARG A 296 N ARG A 148 SHEET 1 AA4 2 GLY A 202 ARG A 204 0 SHEET 2 AA4 2 LYS A 207 VAL A 209 -1 O VAL A 209 N GLY A 202 SHEET 1 AA510 GLN B 52 PRO B 53 0 SHEET 2 AA510 LYS B 37 ASP B 47 -1 N ALA B 46 O GLN B 52 SHEET 3 AA510 GLY B 27 TYR B 34 -1 N VAL B 30 O PHE B 41 SHEET 4 AA510 LEU B 334 ALA B 340 -1 O LEU B 339 N ALA B 29 SHEET 5 AA510 GLY B 323 ILE B 329 -1 N ILE B 329 O LEU B 334 SHEET 6 AA510 SER B 311 ALA B 318 -1 N GLY B 317 O SER B 324 SHEET 7 AA510 GLU B 272 ASP B 275 -1 N LEU B 274 O TRP B 312 SHEET 8 AA510 MET B 265 GLN B 267 -1 N TYR B 266 O MET B 273 SHEET 9 AA510 ARG B 258 THR B 262 -1 N TYR B 259 O GLN B 267 SHEET 10 AA510 LYS B 299 THR B 305 -1 O LYS B 299 N GLN B 261 SHEET 1 AA6 2 PHE B 60 GLU B 61 0 SHEET 2 AA6 2 LYS B 224 SER B 225 -1 O SER B 225 N PHE B 60 SHEET 1 AA7 2 GLN B 147 ARG B 148 0 SHEET 2 AA7 2 ARG B 296 PRO B 297 -1 O ARG B 296 N ARG B 148 SHEET 1 AA8 2 GLY B 202 ARG B 204 0 SHEET 2 AA8 2 LYS B 207 VAL B 209 -1 O VAL B 209 N GLY B 202 CISPEP 1 TRP A 276 PRO A 277 0 1.25 CISPEP 2 THR A 302 PRO A 303 0 -2.10 CISPEP 3 TRP B 276 PRO B 277 0 1.42 CISPEP 4 THR B 302 PRO B 303 0 -5.40 CRYST1 118.711 77.647 98.749 90.00 116.08 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008424 0.000000 0.004124 0.00000 SCALE2 0.000000 0.012879 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011275 0.00000 CONECT 5602 5603 5604 5605 5606 CONECT 5603 5602 CONECT 5604 5602 CONECT 5605 5602 CONECT 5606 5602 MASTER 429 0 2 33 32 0 0 6 6014 2 5 56 END