HEADER TRANSFERASE 16-JAN-26 9TXW TITLE CATALYTIC DOMAIN OF HUMAN TANKYRASE 2 IN COMPLEX WITH BENZAMIDE TITLE 2 ADENINE DINUCLEOTIDE (BAD) COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY [ADP-RIBOSE] POLYMERASE TANKYRASE-2; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 6,ARTD6,POLY COMPND 5 [ADP-RIBOSE] POLYMERASE 5B,PROTEIN POLY-ADP-RIBOSYLTRANSFERASE COMPND 6 TANKYRASE-2,TNKS-2,TRF1-INTERACTING ANKYRIN-RELATED ADP-RIBOSE COMPND 7 POLYMERASE 2,TANKYRASE II,TANKYRASE-2,TANK2,TANKYRASE-LIKE PROTEIN, COMPND 8 TANKYRASE-RELATED PROTEIN; COMPND 9 EC: 2.4.2.30,2.4.2.-; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: FRAGMENT L946-M1113 OF CATALYTIC DOMAIN L946-E1161 COMPND 12 AFTER CLEAVAGE WITH CHYMOTRYPSIN; COMPND 13 MOL_ID: 2; COMPND 14 MOLECULE: POLY [ADP-RIBOSE] POLYMERASE TANKYRASE-2; COMPND 15 CHAIN: B, D; COMPND 16 SYNONYM: ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 6,ARTD6,POLY COMPND 17 [ADP-RIBOSE] POLYMERASE 5B,PROTEIN POLY-ADP-RIBOSYLTRANSFERASE COMPND 18 TANKYRASE-2,TNKS-2,TRF1-INTERACTING ANKYRIN-RELATED ADP-RIBOSE COMPND 19 POLYMERASE 2,TANKYRASE II,TANKYRASE-2,TANK2,TANKYRASE-LIKE PROTEIN, COMPND 20 TANKYRASE-RELATED PROTEIN; COMPND 21 EC: 2.4.2.30,2.4.2.-; COMPND 22 ENGINEERED: YES; COMPND 23 OTHER_DETAILS: FRAGMENT K1114-E1161 OF CATALYTIC DOMAIN L946-E1161 COMPND 24 AFTER CLEAVAGE WITH CHYMOTRYPSIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TNKS2, PARP5B, TANK2, TNKL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC-MBP; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: TNKS2, PARP5B, TANK2, TNKL; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PNIC-MBP KEYWDS ADP-RIBOSYLATION, PARP, TNKS2, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.PAAKKONEN,L.LEHTIO REVDAT 1 05-AUG-26 9TXW 0 JRNL AUTH J.PAAKKONEN,S.T.SOWA,C.BOSETTI,L.LEHTIO JRNL TITL REPLACEMENT SOAKING FOR HUMAN TANKYRASE 2 ENABLES STUDIES ON JRNL TITL 2 SUBSTRATE ANALOGUES AND INHIBITORS. JRNL REF ACTA CRYSTALLOGR D STRUCT 2026 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 42522928 JRNL DOI 10.1107/S2059798326006868 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22048 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM SELECTION REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.996 REMARK 3 FREE R VALUE TEST SET COUNT : 2204 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1435 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 160 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3250 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 115 REMARK 3 SOLVENT ATOMS : 57 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.91700 REMARK 3 B22 (A**2) : 1.08600 REMARK 3 B33 (A**2) : -3.00300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.363 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.240 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.186 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.026 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3484 ; 0.006 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3069 ; 0.002 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4713 ; 1.459 ; 1.842 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7066 ; 0.521 ; 1.776 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 407 ; 6.662 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 30 ; 7.781 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 553 ;12.112 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 474 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4126 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 880 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 606 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 36 ; 0.284 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1627 ; 0.183 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 81 ; 0.122 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1623 ; 3.586 ; 3.985 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1619 ; 3.574 ; 3.981 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2019 ; 5.721 ; 7.129 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2018 ; 5.712 ; 7.129 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1861 ; 4.665 ; 4.603 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1862 ; 4.663 ; 4.603 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2690 ; 7.526 ; 8.248 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2691 ; 7.525 ; 8.248 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : chain A chain C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 951 A 1110 NULL REMARK 3 1 C 951 C 1110 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : chain B, fragment 1 chain D, REMARK 3 fragment 1 REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 2 B 1116 B 1128 NULL REMARK 3 2 D 1116 D 1128 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : chain B, fragment 2 chain D, REMARK 3 fragment 2 REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 3 B 1137 B 1161 NULL REMARK 3 3 D 1137 D 1161 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9TXW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JUN-26. REMARK 100 THE DEPOSITION ID IS D_1292148898. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95374 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 19, 2025 REMARK 200 DATA SCALING SOFTWARE : XSCALE JAN 19, 2025 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22048 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 74.455 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 40.30 REMARK 200 R MERGE (I) : 0.34800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 39.80 REMARK 200 R MERGE FOR SHELL (I) : 1.98800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% (W/V) PEG 3350, 0.2 M LITHIUM REMARK 280 SULFATE, 0.1 M TRIS, 1% (V/V) DMSO, 1 MM INHIBITOR, PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.93000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.45500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.30500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.45500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.93000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.30500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 944 REMARK 465 MET A 945 REMARK 465 LEU A 946 REMARK 465 ASN A 947 REMARK 465 THR A 948 REMARK 465 SER A 949 REMARK 465 GLY A 950 REMARK 465 SER A 1111 REMARK 465 ALA A 1112 REMARK 465 MET A 1113 REMARK 465 SER C 944 REMARK 465 MET C 945 REMARK 465 LEU C 946 REMARK 465 ASN C 947 REMARK 465 THR C 948 REMARK 465 SER C 949 REMARK 465 GLY C 950 REMARK 465 SER C 1111 REMARK 465 ALA C 1112 REMARK 465 MET C 1113 REMARK 465 LYS B 1114 REMARK 465 MET B 1115 REMARK 465 PRO B 1129 REMARK 465 SER B 1130 REMARK 465 VAL B 1131 REMARK 465 ASN B 1132 REMARK 465 GLY B 1133 REMARK 465 LEU B 1134 REMARK 465 ALA B 1135 REMARK 465 LEU B 1136 REMARK 465 LYS D 1114 REMARK 465 MET D 1115 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A1051 CG1 CG2 CD1 REMARK 470 ILE C1051 CG1 CG2 CD1 REMARK 470 VAL D1131 CG1 CG2 REMARK 470 ASN D1132 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B1143 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 GLU D1138 CB - CA - C ANGL. DEV. = 12.6 DEGREES REMARK 500 ARG D1143 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A1033 147.59 -171.73 REMARK 500 ILE A1051 42.72 -86.74 REMARK 500 SER C1033 148.18 -170.75 REMARK 500 ILE C1051 43.05 -86.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1081 SG REMARK 620 2 HIS A1084 ND1 111.6 REMARK 620 3 CYS A1089 SG 107.9 106.4 REMARK 620 4 CYS A1092 SG 114.0 103.7 112.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C1081 SG REMARK 620 2 HIS C1084 ND1 111.8 REMARK 620 3 CYS C1089 SG 107.8 107.8 REMARK 620 4 CYS C1092 SG 112.9 104.6 112.0 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7OJO RELATED DB: PDB REMARK 900 RELATED COMPLEX STRUCTURE OF TNKS2 WITH TWO SMALL INHIBITORS REMARK 900 RELATED ID: 6BHV RELATED DB: PDB REMARK 900 SIMILAR COMPLEX STRUCTURE OF PARP1 WITH BAD DBREF 9TXW A 946 1113 UNP Q9H2K2 TNKS2_HUMAN 946 1113 DBREF 9TXW C 946 1113 UNP Q9H2K2 TNKS2_HUMAN 946 1113 DBREF 9TXW B 1114 1161 UNP Q9H2K2 TNKS2_HUMAN 1114 1161 DBREF 9TXW D 1114 1161 UNP Q9H2K2 TNKS2_HUMAN 1114 1161 SEQADV 9TXW SER A 944 UNP Q9H2K2 EXPRESSION TAG SEQADV 9TXW MET A 945 UNP Q9H2K2 EXPRESSION TAG SEQADV 9TXW SER C 944 UNP Q9H2K2 EXPRESSION TAG SEQADV 9TXW MET C 945 UNP Q9H2K2 EXPRESSION TAG SEQRES 1 A 170 SER MET LEU ASN THR SER GLY SER GLY THR ILE LEU ILE SEQRES 2 A 170 ASP LEU SER PRO ASP ASP LYS GLU PHE GLN SER VAL GLU SEQRES 3 A 170 GLU GLU MET GLN SER THR VAL ARG GLU HIS ARG ASP GLY SEQRES 4 A 170 GLY HIS ALA GLY GLY ILE PHE ASN ARG TYR ASN ILE LEU SEQRES 5 A 170 LYS ILE GLN LYS VAL CYS ASN LYS LYS LEU TRP GLU ARG SEQRES 6 A 170 TYR THR HIS ARG ARG LYS GLU VAL SER GLU GLU ASN HIS SEQRES 7 A 170 ASN HIS ALA ASN GLU ARG MET LEU PHE HIS GLY SER PRO SEQRES 8 A 170 PHE VAL ASN ALA ILE ILE HIS LYS GLY PHE ASP GLU ARG SEQRES 9 A 170 HIS ALA TYR ILE GLY GLY MET PHE GLY ALA GLY ILE TYR SEQRES 10 A 170 PHE ALA GLU ASN SER SER LYS SER ASN GLN TYR VAL TYR SEQRES 11 A 170 GLY ILE GLY GLY GLY THR GLY CYS PRO VAL HIS LYS ASP SEQRES 12 A 170 ARG SER CYS TYR ILE CYS HIS ARG GLN LEU LEU PHE CYS SEQRES 13 A 170 ARG VAL THR LEU GLY LYS SER PHE LEU GLN PHE SER ALA SEQRES 14 A 170 MET SEQRES 1 C 170 SER MET LEU ASN THR SER GLY SER GLY THR ILE LEU ILE SEQRES 2 C 170 ASP LEU SER PRO ASP ASP LYS GLU PHE GLN SER VAL GLU SEQRES 3 C 170 GLU GLU MET GLN SER THR VAL ARG GLU HIS ARG ASP GLY SEQRES 4 C 170 GLY HIS ALA GLY GLY ILE PHE ASN ARG TYR ASN ILE LEU SEQRES 5 C 170 LYS ILE GLN LYS VAL CYS ASN LYS LYS LEU TRP GLU ARG SEQRES 6 C 170 TYR THR HIS ARG ARG LYS GLU VAL SER GLU GLU ASN HIS SEQRES 7 C 170 ASN HIS ALA ASN GLU ARG MET LEU PHE HIS GLY SER PRO SEQRES 8 C 170 PHE VAL ASN ALA ILE ILE HIS LYS GLY PHE ASP GLU ARG SEQRES 9 C 170 HIS ALA TYR ILE GLY GLY MET PHE GLY ALA GLY ILE TYR SEQRES 10 C 170 PHE ALA GLU ASN SER SER LYS SER ASN GLN TYR VAL TYR SEQRES 11 C 170 GLY ILE GLY GLY GLY THR GLY CYS PRO VAL HIS LYS ASP SEQRES 12 C 170 ARG SER CYS TYR ILE CYS HIS ARG GLN LEU LEU PHE CYS SEQRES 13 C 170 ARG VAL THR LEU GLY LYS SER PHE LEU GLN PHE SER ALA SEQRES 14 C 170 MET SEQRES 1 B 48 LYS MET ALA HIS SER PRO PRO GLY HIS HIS SER VAL THR SEQRES 2 B 48 GLY ARG PRO SER VAL ASN GLY LEU ALA LEU ALA GLU TYR SEQRES 3 B 48 VAL ILE TYR ARG GLY GLU GLN ALA TYR PRO GLU TYR LEU SEQRES 4 B 48 ILE THR TYR GLN ILE MET ARG PRO GLU SEQRES 1 D 48 LYS MET ALA HIS SER PRO PRO GLY HIS HIS SER VAL THR SEQRES 2 D 48 GLY ARG PRO SER VAL ASN GLY LEU ALA LEU ALA GLU TYR SEQRES 3 D 48 VAL ILE TYR ARG GLY GLU GLN ALA TYR PRO GLU TYR LEU SEQRES 4 D 48 ILE THR TYR GLN ILE MET ARG PRO GLU HET ZN A1201 1 HET SO4 A1202 5 HET SO4 A1203 5 HET DQV A1204 44 HET ZN C1201 1 HET SO4 C1202 5 HET SO4 C1203 5 HET SO4 C1204 5 HET DQV C1205 44 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM DQV [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4- HETNAM 2 DQV DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4R,5S)-5- HETNAM 3 DQV (3-CARBAMOYLPHENYL)-3,4-DIHYDROXYTETRAHYDROFURAN-2- HETNAM 4 DQV YL]METHYL DIHYDROGEN DIPHOSPHATE (NON-PREFERRED NAME) FORMUL 5 ZN 2(ZN 2+) FORMUL 6 SO4 5(O4 S 2-) FORMUL 8 DQV 2(C22 H28 N6 O14 P2) FORMUL 14 HOH *57(H2 O) HELIX 1 AA1 ASP A 962 THR A 975 1 14 HELIX 2 AA2 ASN A 1002 GLU A 1019 1 18 HELIX 3 AA3 PHE A 1035 GLY A 1043 1 9 HELIX 4 AA4 ASP A 1045 ALA A 1049 5 5 HELIX 5 AA5 ASN A 1064 GLN A 1070 1 7 HELIX 6 AA6 GLY A 1074 GLY A 1078 5 5 HELIX 7 AA7 ASP C 962 THR C 975 1 14 HELIX 8 AA8 ASN C 1002 GLU C 1019 1 18 HELIX 9 AA9 PHE C 1035 GLY C 1043 1 9 HELIX 10 AB1 ASP C 1045 ALA C 1049 5 5 HELIX 11 AB2 ASN C 1064 GLN C 1070 1 7 HELIX 12 AB3 GLY C 1074 GLY C 1078 5 5 HELIX 13 AB4 ARG B 1143 GLU B 1145 5 3 HELIX 14 AB5 ARG D 1143 GLU D 1145 5 3 SHEET 1 AA1 5 ILE A 954 ASP A 957 0 SHEET 2 AA1 5 TYR A 992 CYS A1001 -1 O CYS A1001 N ILE A 954 SHEET 3 AA1 5 ALA B1147 ILE B1157 -1 O THR B1154 N LYS A 996 SHEET 4 AA1 5 ARG A1094 THR A1102 -1 N ARG A1094 O TYR B1155 SHEET 5 AA1 5 GLU A1026 HIS A1031 -1 N LEU A1029 O CYS A1099 SHEET 1 AA2 4 ILE A1059 ALA A1062 0 SHEET 2 AA2 4 GLU B1138 ILE B1141 -1 O ILE B1141 N ILE A1059 SHEET 3 AA2 4 SER B1124 GLY B1127 -1 N VAL B1125 O VAL B1140 SHEET 4 AA2 4 SER A1106 GLN A1109 1 N PHE A1107 O SER B1124 SHEET 1 AA3 5 ILE C 954 ASP C 957 0 SHEET 2 AA3 5 TYR C 992 CYS C1001 -1 O CYS C1001 N ILE C 954 SHEET 3 AA3 5 ALA D1147 ILE D1157 -1 O THR D1154 N LYS C 996 SHEET 4 AA3 5 ARG C1094 THR C1102 -1 N ARG C1094 O TYR D1155 SHEET 5 AA3 5 GLU C1026 HIS C1031 -1 N LEU C1029 O CYS C1099 SHEET 1 AA4 4 ILE C1059 ALA C1062 0 SHEET 2 AA4 4 GLU D1138 ILE D1141 -1 O TYR D1139 N PHE C1061 SHEET 3 AA4 4 SER D1124 GLY D1127 -1 N GLY D1127 O GLU D1138 SHEET 4 AA4 4 SER C1106 GLN C1109 1 N PHE C1107 O SER D1124 LINK SG CYS A1081 ZN ZN A1201 1555 1555 2.30 LINK ND1 HIS A1084 ZN ZN A1201 1555 1555 2.12 LINK SG CYS A1089 ZN ZN A1201 1555 1555 2.30 LINK SG CYS A1092 ZN ZN A1201 1555 1555 2.34 LINK SG CYS C1081 ZN ZN C1201 1555 1555 2.32 LINK ND1 HIS C1084 ZN ZN C1201 1555 1555 2.12 LINK SG CYS C1089 ZN ZN C1201 1555 1555 2.29 LINK SG CYS C1092 ZN ZN C1201 1555 1555 2.32 CRYST1 41.860 76.610 148.910 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023889 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013053 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006715 0.00000 CONECT 1049 3277 CONECT 1070 3277 CONECT 1113 3277 CONECT 1139 3277 CONECT 2343 3332 CONECT 2364 3332 CONECT 2407 3332 CONECT 2433 3332 CONECT 3277 1049 1070 1113 1139 CONECT 3278 3279 3280 3281 3282 CONECT 3279 3278 CONECT 3280 3278 CONECT 3281 3278 CONECT 3282 3278 CONECT 3283 3284 3285 3286 3287 CONECT 3284 3283 CONECT 3285 3283 CONECT 3286 3283 CONECT 3287 3283 CONECT 3288 3319 CONECT 3289 3290 3326 CONECT 3290 3289 3292 3294 CONECT 3291 3319 CONECT 3292 3290 3328 CONECT 3293 3302 3308 3313 CONECT 3294 3290 3321 3324 CONECT 3295 3297 3321 3322 CONECT 3296 3308 3317 CONECT 3297 3295 3320 CONECT 3298 3310 3319 CONECT 3299 3301 3307 CONECT 3300 3310 CONECT 3301 3299 3306 3318 CONECT 3302 3293 3304 3318 CONECT 3303 3316 CONECT 3304 3302 3306 3312 CONECT 3305 3310 CONECT 3306 3301 3304 3311 CONECT 3307 3299 3310 CONECT 3308 3293 3296 CONECT 3309 3315 3316 CONECT 3310 3298 3300 3305 3307 CONECT 3311 3306 CONECT 3312 3304 CONECT 3313 3293 3314 3317 CONECT 3314 3313 3315 CONECT 3315 3309 3314 CONECT 3316 3303 3309 3317 CONECT 3317 3296 3313 3316 CONECT 3318 3301 3302 CONECT 3319 3288 3291 3298 3320 CONECT 3320 3297 3319 CONECT 3321 3294 3295 CONECT 3322 3295 3323 3324 CONECT 3323 3322 CONECT 3324 3294 3322 3325 CONECT 3325 3324 CONECT 3326 3289 3327 CONECT 3327 3326 3328 CONECT 3328 3292 3327 3329 CONECT 3329 3328 3330 3331 CONECT 3330 3329 CONECT 3331 3329 CONECT 3332 2343 2364 2407 2433 CONECT 3333 3334 3335 3336 3337 CONECT 3334 3333 CONECT 3335 3333 CONECT 3336 3333 CONECT 3337 3333 CONECT 3338 3339 3340 3341 3342 CONECT 3339 3338 CONECT 3340 3338 CONECT 3341 3338 CONECT 3342 3338 CONECT 3343 3344 3345 3346 3347 CONECT 3344 3343 CONECT 3345 3343 CONECT 3346 3343 CONECT 3347 3343 CONECT 3348 3379 CONECT 3349 3350 3386 CONECT 3350 3349 3352 3354 CONECT 3351 3379 CONECT 3352 3350 3388 CONECT 3353 3362 3368 3373 CONECT 3354 3350 3381 3384 CONECT 3355 3357 3381 3382 CONECT 3356 3368 3377 CONECT 3357 3355 3380 CONECT 3358 3370 3379 CONECT 3359 3361 3367 CONECT 3360 3370 CONECT 3361 3359 3366 3378 CONECT 3362 3353 3364 3378 CONECT 3363 3376 CONECT 3364 3362 3366 3372 CONECT 3365 3370 CONECT 3366 3361 3364 3371 CONECT 3367 3359 3370 CONECT 3368 3353 3356 CONECT 3369 3375 3376 CONECT 3370 3358 3360 3365 3367 CONECT 3371 3366 CONECT 3372 3364 CONECT 3373 3353 3374 3377 CONECT 3374 3373 3375 CONECT 3375 3369 3374 CONECT 3376 3363 3369 3377 CONECT 3377 3356 3373 3376 CONECT 3378 3361 3362 CONECT 3379 3348 3351 3358 3380 CONECT 3380 3357 3379 CONECT 3381 3354 3355 CONECT 3382 3355 3383 3384 CONECT 3383 3382 CONECT 3384 3354 3382 3385 CONECT 3385 3384 CONECT 3386 3349 3387 CONECT 3387 3386 3388 CONECT 3388 3352 3387 3389 CONECT 3389 3388 3390 3391 CONECT 3390 3389 CONECT 3391 3389 MASTER 397 0 9 14 18 0 0 6 3422 4 123 36 END