data_9U47 # _entry.id 9U47 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9U47 pdb_00009u47 10.2210/pdb9u47/pdb WWPDB D_1300057475 ? ? EMDB EMD-63833 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-08-06 ? 2 'EM metadata' 1 0 2025-08-06 ? 3 FSC 1 0 2025-08-06 ? 4 'Half map' 1 0 2025-08-06 1 5 'Half map' 1 0 2025-08-06 2 6 Image 1 0 2025-08-06 ? 7 Mask 1 0 2025-08-06 1 8 'Primary map' 1 0 2025-08-06 ? 9 'Structure model' 1 1 2025-09-24 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 9 'Structure model' 'Data collection' 2 9 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 9 'Structure model' citation 2 9 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 9 'Structure model' '_citation.country' 2 9 'Structure model' '_citation.journal_abbrev' 3 9 'Structure model' '_citation.journal_id_CSD' 4 9 'Structure model' '_citation.journal_id_ISSN' 5 9 'Structure model' '_citation.journal_volume' 6 9 'Structure model' '_citation.page_first' 7 9 'Structure model' '_citation.page_last' 8 9 'Structure model' '_citation.pdbx_database_id_DOI' 9 9 'Structure model' '_citation.pdbx_database_id_PubMed' 10 9 'Structure model' '_citation.title' 11 9 'Structure model' '_citation.year' 12 9 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9U47 _pdbx_database_status.recvd_initial_deposition_date 2025-03-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Same citation' 9M86 unspecified EMDB 'Cryo-EM structure of SpMETTL16 in complex with U6 snRNA_delta17' EMD-63833 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email kozo-tomita@edu.k.u-tokyo.ac.jp _pdbx_contact_author.name_first Kozo _pdbx_contact_author.name_last Tomita _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7374-3898 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ju, J.' 1 0000-0003-3660-3375 'Tomita, K.' 2 0000-0002-7374-3898 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 7708 _citation.page_last 7708 _citation.title 'Structures and mechanisms of U6 snRNA m 6 A modification by METTL16.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-025-63021-0 _citation.pdbx_database_id_PubMed 40841561 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ju, J.' 1 0000-0003-3660-3375 primary 'Tomita, K.' 2 0000-0002-7374-3898 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'U6 small nuclear RNA' 26476.871 1 ? ? ? ? 2 polymer man 'U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase' 48442.223 1 2.1.1.346 ? ? ;Residues MET A -22 to SER A 0 are expression tags. MET A 1 to PHE A 23 are part of the protein sequence, based on publication (DOI: 10.1038/s41467-021-23457-6). ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no ;GGUCAAAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACUGCGACAUUGAGAGAAAACCCAUU UU ; ;GGUCAAAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACUGCGACAUUGAGAGAAAACCCAUU UU ; B ? 2 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMASMTDKTDIINFDSLARDYPDLRSFVKNGRIDFWNEDAIRTLGKAILDRDYSLRVEFPE NRLCPMVPNRATYIRYIHDLLSSTSGQKDKKRIIGLDIGTGASCIYPLLGCRMYSYDFVGTEIDKFSFETAKSNILQNNM ESQIKIVLRSKQDCLLPDTEGMEEFTFVMCNPPFYEHEEDFINFKQNPPSGVCTGVYHEMVTEGGEVGFANKILTESKKR KGIQWYTCMFGKKSSVPAVVDKLREQNISNYGIYELALGKTKRWIICWSFQAMRPHNELIRPSSTSLSKYFPHKVLQNWT LDPELCAQIDDILQKFLDDNKIPWSKKGSVLEISTKSITWSRKARRISKSQTSVSSLEGQMKCELNVIDNQLQCKWIEGY DYNVYESFCSALARALRDNKK ; ;MGSSHHHHHHSSGLVPRGSHMASMTDKTDIINFDSLARDYPDLRSFVKNGRIDFWNEDAIRTLGKAILDRDYSLRVEFPE NRLCPMVPNRATYIRYIHDLLSSTSGQKDKKRIIGLDIGTGASCIYPLLGCRMYSYDFVGTEIDKFSFETAKSNILQNNM ESQIKIVLRSKQDCLLPDTEGMEEFTFVMCNPPFYEHEEDFINFKQNPPSGVCTGVYHEMVTEGGEVGFANKILTESKKR KGIQWYTCMFGKKSSVPAVVDKLREQNISNYGIYELALGKTKRWIICWSFQAMRPHNELIRPSSTSLSKYFPHKVLQNWT LDPELCAQIDDILQKFLDDNKIPWSKKGSVLEISTKSITWSRKARRISKSQTSVSSLEGQMKCELNVIDNQLQCKWIEGY DYNVYESFCSALARALRDNKK ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 C n 1 5 A n 1 6 A n 1 7 A n 1 8 U n 1 9 U n 1 10 G n 1 11 A n 1 12 A n 1 13 A n 1 14 C n 1 15 G n 1 16 A n 1 17 U n 1 18 A n 1 19 C n 1 20 A n 1 21 G n 1 22 A n 1 23 G n 1 24 A n 1 25 A n 1 26 G n 1 27 A n 1 28 U n 1 29 U n 1 30 A n 1 31 G n 1 32 C n 1 33 A n 1 34 U n 1 35 G n 1 36 G n 1 37 C n 1 38 C n 1 39 C n 1 40 C n 1 41 U n 1 42 G n 1 43 C n 1 44 A n 1 45 C n 1 46 A n 1 47 A n 1 48 G n 1 49 G n 1 50 A n 1 51 U n 1 52 G n 1 53 A n 1 54 C n 1 55 A n 1 56 C n 1 57 U n 1 58 G n 1 59 C n 1 60 G n 1 61 A n 1 62 C n 1 63 A n 1 64 U n 1 65 U n 1 66 G n 1 67 A n 1 68 G n 1 69 A n 1 70 G n 1 71 A n 1 72 A n 1 73 A n 1 74 A n 1 75 C n 1 76 C n 1 77 C n 1 78 A n 1 79 U n 1 80 U n 1 81 U n 1 82 U n 2 1 MET n 2 2 GLY n 2 3 SER n 2 4 SER n 2 5 HIS n 2 6 HIS n 2 7 HIS n 2 8 HIS n 2 9 HIS n 2 10 HIS n 2 11 SER n 2 12 SER n 2 13 GLY n 2 14 LEU n 2 15 VAL n 2 16 PRO n 2 17 ARG n 2 18 GLY n 2 19 SER n 2 20 HIS n 2 21 MET n 2 22 ALA n 2 23 SER n 2 24 MET n 2 25 THR n 2 26 ASP n 2 27 LYS n 2 28 THR n 2 29 ASP n 2 30 ILE n 2 31 ILE n 2 32 ASN n 2 33 PHE n 2 34 ASP n 2 35 SER n 2 36 LEU n 2 37 ALA n 2 38 ARG n 2 39 ASP n 2 40 TYR n 2 41 PRO n 2 42 ASP n 2 43 LEU n 2 44 ARG n 2 45 SER n 2 46 PHE n 2 47 VAL n 2 48 LYS n 2 49 ASN n 2 50 GLY n 2 51 ARG n 2 52 ILE n 2 53 ASP n 2 54 PHE n 2 55 TRP n 2 56 ASN n 2 57 GLU n 2 58 ASP n 2 59 ALA n 2 60 ILE n 2 61 ARG n 2 62 THR n 2 63 LEU n 2 64 GLY n 2 65 LYS n 2 66 ALA n 2 67 ILE n 2 68 LEU n 2 69 ASP n 2 70 ARG n 2 71 ASP n 2 72 TYR n 2 73 SER n 2 74 LEU n 2 75 ARG n 2 76 VAL n 2 77 GLU n 2 78 PHE n 2 79 PRO n 2 80 GLU n 2 81 ASN n 2 82 ARG n 2 83 LEU n 2 84 CYS n 2 85 PRO n 2 86 MET n 2 87 VAL n 2 88 PRO n 2 89 ASN n 2 90 ARG n 2 91 ALA n 2 92 THR n 2 93 TYR n 2 94 ILE n 2 95 ARG n 2 96 TYR n 2 97 ILE n 2 98 HIS n 2 99 ASP n 2 100 LEU n 2 101 LEU n 2 102 SER n 2 103 SER n 2 104 THR n 2 105 SER n 2 106 GLY n 2 107 GLN n 2 108 LYS n 2 109 ASP n 2 110 LYS n 2 111 LYS n 2 112 ARG n 2 113 ILE n 2 114 ILE n 2 115 GLY n 2 116 LEU n 2 117 ASP n 2 118 ILE n 2 119 GLY n 2 120 THR n 2 121 GLY n 2 122 ALA n 2 123 SER n 2 124 CYS n 2 125 ILE n 2 126 TYR n 2 127 PRO n 2 128 LEU n 2 129 LEU n 2 130 GLY n 2 131 CYS n 2 132 ARG n 2 133 MET n 2 134 TYR n 2 135 SER n 2 136 TYR n 2 137 ASP n 2 138 PHE n 2 139 VAL n 2 140 GLY n 2 141 THR n 2 142 GLU n 2 143 ILE n 2 144 ASP n 2 145 LYS n 2 146 PHE n 2 147 SER n 2 148 PHE n 2 149 GLU n 2 150 THR n 2 151 ALA n 2 152 LYS n 2 153 SER n 2 154 ASN n 2 155 ILE n 2 156 LEU n 2 157 GLN n 2 158 ASN n 2 159 ASN n 2 160 MET n 2 161 GLU n 2 162 SER n 2 163 GLN n 2 164 ILE n 2 165 LYS n 2 166 ILE n 2 167 VAL n 2 168 LEU n 2 169 ARG n 2 170 SER n 2 171 LYS n 2 172 GLN n 2 173 ASP n 2 174 CYS n 2 175 LEU n 2 176 LEU n 2 177 PRO n 2 178 ASP n 2 179 THR n 2 180 GLU n 2 181 GLY n 2 182 MET n 2 183 GLU n 2 184 GLU n 2 185 PHE n 2 186 THR n 2 187 PHE n 2 188 VAL n 2 189 MET n 2 190 CYS n 2 191 ASN n 2 192 PRO n 2 193 PRO n 2 194 PHE n 2 195 TYR n 2 196 GLU n 2 197 HIS n 2 198 GLU n 2 199 GLU n 2 200 ASP n 2 201 PHE n 2 202 ILE n 2 203 ASN n 2 204 PHE n 2 205 LYS n 2 206 GLN n 2 207 ASN n 2 208 PRO n 2 209 PRO n 2 210 SER n 2 211 GLY n 2 212 VAL n 2 213 CYS n 2 214 THR n 2 215 GLY n 2 216 VAL n 2 217 TYR n 2 218 HIS n 2 219 GLU n 2 220 MET n 2 221 VAL n 2 222 THR n 2 223 GLU n 2 224 GLY n 2 225 GLY n 2 226 GLU n 2 227 VAL n 2 228 GLY n 2 229 PHE n 2 230 ALA n 2 231 ASN n 2 232 LYS n 2 233 ILE n 2 234 LEU n 2 235 THR n 2 236 GLU n 2 237 SER n 2 238 LYS n 2 239 LYS n 2 240 ARG n 2 241 LYS n 2 242 GLY n 2 243 ILE n 2 244 GLN n 2 245 TRP n 2 246 TYR n 2 247 THR n 2 248 CYS n 2 249 MET n 2 250 PHE n 2 251 GLY n 2 252 LYS n 2 253 LYS n 2 254 SER n 2 255 SER n 2 256 VAL n 2 257 PRO n 2 258 ALA n 2 259 VAL n 2 260 VAL n 2 261 ASP n 2 262 LYS n 2 263 LEU n 2 264 ARG n 2 265 GLU n 2 266 GLN n 2 267 ASN n 2 268 ILE n 2 269 SER n 2 270 ASN n 2 271 TYR n 2 272 GLY n 2 273 ILE n 2 274 TYR n 2 275 GLU n 2 276 LEU n 2 277 ALA n 2 278 LEU n 2 279 GLY n 2 280 LYS n 2 281 THR n 2 282 LYS n 2 283 ARG n 2 284 TRP n 2 285 ILE n 2 286 ILE n 2 287 CYS n 2 288 TRP n 2 289 SER n 2 290 PHE n 2 291 GLN n 2 292 ALA n 2 293 MET n 2 294 ARG n 2 295 PRO n 2 296 HIS n 2 297 ASN n 2 298 GLU n 2 299 LEU n 2 300 ILE n 2 301 ARG n 2 302 PRO n 2 303 SER n 2 304 SER n 2 305 THR n 2 306 SER n 2 307 LEU n 2 308 SER n 2 309 LYS n 2 310 TYR n 2 311 PHE n 2 312 PRO n 2 313 HIS n 2 314 LYS n 2 315 VAL n 2 316 LEU n 2 317 GLN n 2 318 ASN n 2 319 TRP n 2 320 THR n 2 321 LEU n 2 322 ASP n 2 323 PRO n 2 324 GLU n 2 325 LEU n 2 326 CYS n 2 327 ALA n 2 328 GLN n 2 329 ILE n 2 330 ASP n 2 331 ASP n 2 332 ILE n 2 333 LEU n 2 334 GLN n 2 335 LYS n 2 336 PHE n 2 337 LEU n 2 338 ASP n 2 339 ASP n 2 340 ASN n 2 341 LYS n 2 342 ILE n 2 343 PRO n 2 344 TRP n 2 345 SER n 2 346 LYS n 2 347 LYS n 2 348 GLY n 2 349 SER n 2 350 VAL n 2 351 LEU n 2 352 GLU n 2 353 ILE n 2 354 SER n 2 355 THR n 2 356 LYS n 2 357 SER n 2 358 ILE n 2 359 THR n 2 360 TRP n 2 361 SER n 2 362 ARG n 2 363 LYS n 2 364 ALA n 2 365 ARG n 2 366 ARG n 2 367 ILE n 2 368 SER n 2 369 LYS n 2 370 SER n 2 371 GLN n 2 372 THR n 2 373 SER n 2 374 VAL n 2 375 SER n 2 376 SER n 2 377 LEU n 2 378 GLU n 2 379 GLY n 2 380 GLN n 2 381 MET n 2 382 LYS n 2 383 CYS n 2 384 GLU n 2 385 LEU n 2 386 ASN n 2 387 VAL n 2 388 ILE n 2 389 ASP n 2 390 ASN n 2 391 GLN n 2 392 LEU n 2 393 GLN n 2 394 CYS n 2 395 LYS n 2 396 TRP n 2 397 ILE n 2 398 GLU n 2 399 GLY n 2 400 TYR n 2 401 ASP n 2 402 TYR n 2 403 ASN n 2 404 VAL n 2 405 TYR n 2 406 GLU n 2 407 SER n 2 408 PHE n 2 409 CYS n 2 410 SER n 2 411 ALA n 2 412 LEU n 2 413 ALA n 2 414 ARG n 2 415 ALA n 2 416 LEU n 2 417 ARG n 2 418 ASP n 2 419 ASN n 2 420 LYS n 2 421 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 2 1 sample 'Biological sequence' 1 46 'fission yeast' ? SPAC27D7.08c ? ED668 ? ? ? ? 'Schizosaccharomyces pombe' 4896 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? Rosetta2 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 2 sample 'Biological sequence' 47 421 'fission yeast' ? SPAC27D7.08c ? ED668 ? ? ? ? 'Schizosaccharomyces pombe' 4896 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? Rosetta2 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 82 _pdbx_entity_src_syn.organism_scientific 'Schizosaccharomyces pombe' _pdbx_entity_src_syn.organism_common_name 'fission yeast' _pdbx_entity_src_syn.ncbi_taxonomy_id 4896 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 18 ? ? ? B . n A 1 2 G 2 19 ? ? ? B . n A 1 3 U 3 20 ? ? ? B . n A 1 4 C 4 21 ? ? ? B . n A 1 5 A 5 22 ? ? ? B . n A 1 6 A 6 23 ? ? ? B . n A 1 7 A 7 24 ? ? ? B . n A 1 8 U 8 25 ? ? ? B . n A 1 9 U 9 26 ? ? ? B . n A 1 10 G 10 27 ? ? ? B . n A 1 11 A 11 28 ? ? ? B . n A 1 12 A 12 29 ? ? ? B . n A 1 13 A 13 30 ? ? ? B . n A 1 14 C 14 31 ? ? ? B . n A 1 15 G 15 32 ? ? ? B . n A 1 16 A 16 33 ? ? ? B . n A 1 17 U 17 34 ? ? ? B . n A 1 18 A 18 35 ? ? ? B . n A 1 19 C 19 36 ? ? ? B . n A 1 20 A 20 37 ? ? ? B . n A 1 21 G 21 38 ? ? ? B . n A 1 22 A 22 39 ? ? ? B . n A 1 23 G 23 40 ? ? ? B . n A 1 24 A 24 41 41 A A B . n A 1 25 A 25 42 42 A A B . n A 1 26 G 26 43 43 G G B . n A 1 27 A 27 44 44 A A B . n A 1 28 U 28 45 45 U U B . n A 1 29 U 29 46 46 U U B . n A 1 30 A 30 47 47 A A B . n A 1 31 G 31 48 48 G G B . n A 1 32 C 32 49 49 C C B . n A 1 33 A 33 50 50 A A B . n A 1 34 U 34 51 51 U U B . n A 1 35 G 35 52 52 G G B . n A 1 36 G 36 53 53 G G B . n A 1 37 C 37 54 54 C C B . n A 1 38 C 38 55 55 C C B . n A 1 39 C 39 56 56 C C B . n A 1 40 C 40 57 57 C C B . n A 1 41 U 41 58 58 U U B . n A 1 42 G 42 59 59 G G B . n A 1 43 C 43 60 60 C C B . n A 1 44 A 44 61 61 A A B . n A 1 45 C 45 62 62 C C B . n A 1 46 A 46 63 63 A A B . n A 1 47 A 47 64 64 A A B . n A 1 48 G 48 65 65 G G B . n A 1 49 G 49 66 66 G G B . n A 1 50 A 50 67 67 A A B . n A 1 51 U 51 68 68 U U B . n A 1 52 G 52 69 69 G G B . n A 1 53 A 53 70 70 A A B . n A 1 54 C 54 71 71 C C B . n A 1 55 A 55 72 72 A A B . n A 1 56 C 56 73 73 C C B . n A 1 57 U 57 74 74 U U B . n A 1 58 G 58 75 75 G G B . n A 1 59 C 59 76 76 C C B . n A 1 60 G 60 77 77 G G B . n A 1 61 A 61 78 78 A A B . n A 1 62 C 62 79 79 C C B . n A 1 63 A 63 80 80 A A B . n A 1 64 U 64 81 81 U U B . n A 1 65 U 65 82 82 U U B . n A 1 66 G 66 83 ? ? ? B . n A 1 67 A 67 84 ? ? ? B . n A 1 68 G 68 85 ? ? ? B . n A 1 69 A 69 86 ? ? ? B . n A 1 70 G 70 87 ? ? ? B . n A 1 71 A 71 88 ? ? ? B . n A 1 72 A 72 89 ? ? ? B . n A 1 73 A 73 90 ? ? ? B . n A 1 74 A 74 91 ? ? ? B . n A 1 75 C 75 92 ? ? ? B . n A 1 76 C 76 93 ? ? ? B . n A 1 77 C 77 94 ? ? ? B . n A 1 78 A 78 95 ? ? ? B . n A 1 79 U 79 96 ? ? ? B . n A 1 80 U 80 97 ? ? ? B . n A 1 81 U 81 98 ? ? ? B . n A 1 82 U 82 99 ? ? ? B . n B 2 1 MET 1 -22 ? ? ? A . n B 2 2 GLY 2 -21 ? ? ? A . n B 2 3 SER 3 -20 ? ? ? A . n B 2 4 SER 4 -19 ? ? ? A . n B 2 5 HIS 5 -18 ? ? ? A . n B 2 6 HIS 6 -17 ? ? ? A . n B 2 7 HIS 7 -16 ? ? ? A . n B 2 8 HIS 8 -15 ? ? ? A . n B 2 9 HIS 9 -14 ? ? ? A . n B 2 10 HIS 10 -13 ? ? ? A . n B 2 11 SER 11 -12 ? ? ? A . n B 2 12 SER 12 -11 ? ? ? A . n B 2 13 GLY 13 -10 ? ? ? A . n B 2 14 LEU 14 -9 ? ? ? A . n B 2 15 VAL 15 -8 ? ? ? A . n B 2 16 PRO 16 -7 ? ? ? A . n B 2 17 ARG 17 -6 ? ? ? A . n B 2 18 GLY 18 -5 ? ? ? A . n B 2 19 SER 19 -4 ? ? ? A . n B 2 20 HIS 20 -3 ? ? ? A . n B 2 21 MET 21 -2 ? ? ? A . n B 2 22 ALA 22 -1 ? ? ? A . n B 2 23 SER 23 0 ? ? ? A . n B 2 24 MET 24 1 ? ? ? A . n B 2 25 THR 25 2 ? ? ? A . n B 2 26 ASP 26 3 ? ? ? A . n B 2 27 LYS 27 4 ? ? ? A . n B 2 28 THR 28 5 ? ? ? A . n B 2 29 ASP 29 6 ? ? ? A . n B 2 30 ILE 30 7 ? ? ? A . n B 2 31 ILE 31 8 ? ? ? A . n B 2 32 ASN 32 9 ? ? ? A . n B 2 33 PHE 33 10 ? ? ? A . n B 2 34 ASP 34 11 ? ? ? A . n B 2 35 SER 35 12 ? ? ? A . n B 2 36 LEU 36 13 ? ? ? A . n B 2 37 ALA 37 14 ? ? ? A . n B 2 38 ARG 38 15 ? ? ? A . n B 2 39 ASP 39 16 ? ? ? A . n B 2 40 TYR 40 17 ? ? ? A . n B 2 41 PRO 41 18 ? ? ? A . n B 2 42 ASP 42 19 ? ? ? A . n B 2 43 LEU 43 20 ? ? ? A . n B 2 44 ARG 44 21 ? ? ? A . n B 2 45 SER 45 22 ? ? ? A . n B 2 46 PHE 46 23 ? ? ? A . n B 2 47 VAL 47 24 ? ? ? A . n B 2 48 LYS 48 25 ? ? ? A . n B 2 49 ASN 49 26 ? ? ? A . n B 2 50 GLY 50 27 ? ? ? A . n B 2 51 ARG 51 28 ? ? ? A . n B 2 52 ILE 52 29 ? ? ? A . n B 2 53 ASP 53 30 ? ? ? A . n B 2 54 PHE 54 31 ? ? ? A . n B 2 55 TRP 55 32 ? ? ? A . n B 2 56 ASN 56 33 ? ? ? A . n B 2 57 GLU 57 34 ? ? ? A . n B 2 58 ASP 58 35 ? ? ? A . n B 2 59 ALA 59 36 ? ? ? A . n B 2 60 ILE 60 37 ? ? ? A . n B 2 61 ARG 61 38 ? ? ? A . n B 2 62 THR 62 39 ? ? ? A . n B 2 63 LEU 63 40 ? ? ? A . n B 2 64 GLY 64 41 ? ? ? A . n B 2 65 LYS 65 42 ? ? ? A . n B 2 66 ALA 66 43 ? ? ? A . n B 2 67 ILE 67 44 ? ? ? A . n B 2 68 LEU 68 45 ? ? ? A . n B 2 69 ASP 69 46 ? ? ? A . n B 2 70 ARG 70 47 ? ? ? A . n B 2 71 ASP 71 48 ? ? ? A . n B 2 72 TYR 72 49 ? ? ? A . n B 2 73 SER 73 50 ? ? ? A . n B 2 74 LEU 74 51 ? ? ? A . n B 2 75 ARG 75 52 ? ? ? A . n B 2 76 VAL 76 53 ? ? ? A . n B 2 77 GLU 77 54 ? ? ? A . n B 2 78 PHE 78 55 ? ? ? A . n B 2 79 PRO 79 56 ? ? ? A . n B 2 80 GLU 80 57 ? ? ? A . n B 2 81 ASN 81 58 ? ? ? A . n B 2 82 ARG 82 59 ? ? ? A . n B 2 83 LEU 83 60 ? ? ? A . n B 2 84 CYS 84 61 ? ? ? A . n B 2 85 PRO 85 62 62 PRO PRO A . n B 2 86 MET 86 63 63 MET MET A . n B 2 87 VAL 87 64 64 VAL VAL A . n B 2 88 PRO 88 65 65 PRO PRO A . n B 2 89 ASN 89 66 66 ASN ASN A . n B 2 90 ARG 90 67 67 ARG ARG A . n B 2 91 ALA 91 68 68 ALA ALA A . n B 2 92 THR 92 69 69 THR THR A . n B 2 93 TYR 93 70 70 TYR TYR A . n B 2 94 ILE 94 71 71 ILE ILE A . n B 2 95 ARG 95 72 72 ARG ARG A . n B 2 96 TYR 96 73 73 TYR TYR A . n B 2 97 ILE 97 74 74 ILE ILE A . n B 2 98 HIS 98 75 75 HIS HIS A . n B 2 99 ASP 99 76 76 ASP ASP A . n B 2 100 LEU 100 77 77 LEU LEU A . n B 2 101 LEU 101 78 78 LEU LEU A . n B 2 102 SER 102 79 79 SER SER A . n B 2 103 SER 103 80 80 SER SER A . n B 2 104 THR 104 81 81 THR THR A . n B 2 105 SER 105 82 82 SER SER A . n B 2 106 GLY 106 83 83 GLY GLY A . n B 2 107 GLN 107 84 84 GLN GLN A . n B 2 108 LYS 108 85 85 LYS LYS A . n B 2 109 ASP 109 86 86 ASP ASP A . n B 2 110 LYS 110 87 87 LYS LYS A . n B 2 111 LYS 111 88 88 LYS LYS A . n B 2 112 ARG 112 89 89 ARG ARG A . n B 2 113 ILE 113 90 90 ILE ILE A . n B 2 114 ILE 114 91 91 ILE ILE A . n B 2 115 GLY 115 92 92 GLY GLY A . n B 2 116 LEU 116 93 93 LEU LEU A . n B 2 117 ASP 117 94 94 ASP ASP A . n B 2 118 ILE 118 95 95 ILE ILE A . n B 2 119 GLY 119 96 96 GLY GLY A . n B 2 120 THR 120 97 97 THR THR A . n B 2 121 GLY 121 98 98 GLY GLY A . n B 2 122 ALA 122 99 99 ALA ALA A . n B 2 123 SER 123 100 100 SER SER A . n B 2 124 CYS 124 101 101 CYS CYS A . n B 2 125 ILE 125 102 102 ILE ILE A . n B 2 126 TYR 126 103 103 TYR TYR A . n B 2 127 PRO 127 104 104 PRO PRO A . n B 2 128 LEU 128 105 105 LEU LEU A . n B 2 129 LEU 129 106 106 LEU LEU A . n B 2 130 GLY 130 107 107 GLY GLY A . n B 2 131 CYS 131 108 108 CYS CYS A . n B 2 132 ARG 132 109 109 ARG ARG A . n B 2 133 MET 133 110 110 MET MET A . n B 2 134 TYR 134 111 111 TYR TYR A . n B 2 135 SER 135 112 112 SER SER A . n B 2 136 TYR 136 113 113 TYR TYR A . n B 2 137 ASP 137 114 114 ASP ASP A . n B 2 138 PHE 138 115 115 PHE PHE A . n B 2 139 VAL 139 116 116 VAL VAL A . n B 2 140 GLY 140 117 117 GLY GLY A . n B 2 141 THR 141 118 118 THR THR A . n B 2 142 GLU 142 119 119 GLU GLU A . n B 2 143 ILE 143 120 120 ILE ILE A . n B 2 144 ASP 144 121 121 ASP ASP A . n B 2 145 LYS 145 122 122 LYS LYS A . n B 2 146 PHE 146 123 123 PHE PHE A . n B 2 147 SER 147 124 124 SER SER A . n B 2 148 PHE 148 125 125 PHE PHE A . n B 2 149 GLU 149 126 126 GLU GLU A . n B 2 150 THR 150 127 127 THR THR A . n B 2 151 ALA 151 128 128 ALA ALA A . n B 2 152 LYS 152 129 129 LYS LYS A . n B 2 153 SER 153 130 130 SER SER A . n B 2 154 ASN 154 131 131 ASN ASN A . n B 2 155 ILE 155 132 132 ILE ILE A . n B 2 156 LEU 156 133 133 LEU LEU A . n B 2 157 GLN 157 134 134 GLN GLN A . n B 2 158 ASN 158 135 135 ASN ASN A . n B 2 159 ASN 159 136 136 ASN ASN A . n B 2 160 MET 160 137 137 MET MET A . n B 2 161 GLU 161 138 138 GLU GLU A . n B 2 162 SER 162 139 139 SER SER A . n B 2 163 GLN 163 140 140 GLN GLN A . n B 2 164 ILE 164 141 141 ILE ILE A . n B 2 165 LYS 165 142 142 LYS LYS A . n B 2 166 ILE 166 143 143 ILE ILE A . n B 2 167 VAL 167 144 144 VAL VAL A . n B 2 168 LEU 168 145 145 LEU LEU A . n B 2 169 ARG 169 146 146 ARG ARG A . n B 2 170 SER 170 147 147 SER SER A . n B 2 171 LYS 171 148 148 LYS LYS A . n B 2 172 GLN 172 149 149 GLN GLN A . n B 2 173 ASP 173 150 150 ASP ASP A . n B 2 174 CYS 174 151 151 CYS CYS A . n B 2 175 LEU 175 152 152 LEU LEU A . n B 2 176 LEU 176 153 153 LEU LEU A . n B 2 177 PRO 177 154 154 PRO PRO A . n B 2 178 ASP 178 155 155 ASP ASP A . n B 2 179 THR 179 156 156 THR THR A . n B 2 180 GLU 180 157 157 GLU GLU A . n B 2 181 GLY 181 158 158 GLY GLY A . n B 2 182 MET 182 159 159 MET MET A . n B 2 183 GLU 183 160 160 GLU GLU A . n B 2 184 GLU 184 161 161 GLU GLU A . n B 2 185 PHE 185 162 162 PHE PHE A . n B 2 186 THR 186 163 163 THR THR A . n B 2 187 PHE 187 164 164 PHE PHE A . n B 2 188 VAL 188 165 165 VAL VAL A . n B 2 189 MET 189 166 166 MET MET A . n B 2 190 CYS 190 167 167 CYS CYS A . n B 2 191 ASN 191 168 168 ASN ASN A . n B 2 192 PRO 192 169 169 PRO PRO A . n B 2 193 PRO 193 170 170 PRO PRO A . n B 2 194 PHE 194 171 171 PHE PHE A . n B 2 195 TYR 195 172 ? ? ? A . n B 2 196 GLU 196 173 ? ? ? A . n B 2 197 HIS 197 174 ? ? ? A . n B 2 198 GLU 198 175 ? ? ? A . n B 2 199 GLU 199 176 ? ? ? A . n B 2 200 ASP 200 177 ? ? ? A . n B 2 201 PHE 201 178 ? ? ? A . n B 2 202 ILE 202 179 ? ? ? A . n B 2 203 ASN 203 180 ? ? ? A . n B 2 204 PHE 204 181 ? ? ? A . n B 2 205 LYS 205 182 ? ? ? A . n B 2 206 GLN 206 183 ? ? ? A . n B 2 207 ASN 207 184 ? ? ? A . n B 2 208 PRO 208 185 ? ? ? A . n B 2 209 PRO 209 186 ? ? ? A . n B 2 210 SER 210 187 ? ? ? A . n B 2 211 GLY 211 188 ? ? ? A . n B 2 212 VAL 212 189 ? ? ? A . n B 2 213 CYS 213 190 ? ? ? A . n B 2 214 THR 214 191 ? ? ? A . n B 2 215 GLY 215 192 ? ? ? A . n B 2 216 VAL 216 193 ? ? ? A . n B 2 217 TYR 217 194 ? ? ? A . n B 2 218 HIS 218 195 ? ? ? A . n B 2 219 GLU 219 196 ? ? ? A . n B 2 220 MET 220 197 ? ? ? A . n B 2 221 VAL 221 198 ? ? ? A . n B 2 222 THR 222 199 ? ? ? A . n B 2 223 GLU 223 200 ? ? ? A . n B 2 224 GLY 224 201 201 GLY GLY A . n B 2 225 GLY 225 202 202 GLY GLY A . n B 2 226 GLU 226 203 203 GLU GLU A . n B 2 227 VAL 227 204 204 VAL VAL A . n B 2 228 GLY 228 205 205 GLY GLY A . n B 2 229 PHE 229 206 206 PHE PHE A . n B 2 230 ALA 230 207 207 ALA ALA A . n B 2 231 ASN 231 208 208 ASN ASN A . n B 2 232 LYS 232 209 209 LYS LYS A . n B 2 233 ILE 233 210 210 ILE ILE A . n B 2 234 LEU 234 211 211 LEU LEU A . n B 2 235 THR 235 212 212 THR THR A . n B 2 236 GLU 236 213 213 GLU GLU A . n B 2 237 SER 237 214 214 SER SER A . n B 2 238 LYS 238 215 215 LYS LYS A . n B 2 239 LYS 239 216 216 LYS LYS A . n B 2 240 ARG 240 217 217 ARG ARG A . n B 2 241 LYS 241 218 218 LYS LYS A . n B 2 242 GLY 242 219 219 GLY GLY A . n B 2 243 ILE 243 220 220 ILE ILE A . n B 2 244 GLN 244 221 221 GLN GLN A . n B 2 245 TRP 245 222 222 TRP TRP A . n B 2 246 TYR 246 223 223 TYR TYR A . n B 2 247 THR 247 224 224 THR THR A . n B 2 248 CYS 248 225 225 CYS CYS A . n B 2 249 MET 249 226 226 MET MET A . n B 2 250 PHE 250 227 227 PHE PHE A . n B 2 251 GLY 251 228 228 GLY GLY A . n B 2 252 LYS 252 229 229 LYS LYS A . n B 2 253 LYS 253 230 230 LYS LYS A . n B 2 254 SER 254 231 231 SER SER A . n B 2 255 SER 255 232 232 SER SER A . n B 2 256 VAL 256 233 233 VAL VAL A . n B 2 257 PRO 257 234 234 PRO PRO A . n B 2 258 ALA 258 235 235 ALA ALA A . n B 2 259 VAL 259 236 236 VAL VAL A . n B 2 260 VAL 260 237 237 VAL VAL A . n B 2 261 ASP 261 238 238 ASP ASP A . n B 2 262 LYS 262 239 239 LYS LYS A . n B 2 263 LEU 263 240 240 LEU LEU A . n B 2 264 ARG 264 241 241 ARG ARG A . n B 2 265 GLU 265 242 242 GLU GLU A . n B 2 266 GLN 266 243 243 GLN GLN A . n B 2 267 ASN 267 244 244 ASN ASN A . n B 2 268 ILE 268 245 245 ILE ILE A . n B 2 269 SER 269 246 246 SER SER A . n B 2 270 ASN 270 247 247 ASN ASN A . n B 2 271 TYR 271 248 248 TYR TYR A . n B 2 272 GLY 272 249 249 GLY GLY A . n B 2 273 ILE 273 250 250 ILE ILE A . n B 2 274 TYR 274 251 251 TYR TYR A . n B 2 275 GLU 275 252 252 GLU GLU A . n B 2 276 LEU 276 253 253 LEU LEU A . n B 2 277 ALA 277 254 254 ALA ALA A . n B 2 278 LEU 278 255 255 LEU LEU A . n B 2 279 GLY 279 256 256 GLY GLY A . n B 2 280 LYS 280 257 257 LYS LYS A . n B 2 281 THR 281 258 258 THR THR A . n B 2 282 LYS 282 259 259 LYS LYS A . n B 2 283 ARG 283 260 260 ARG ARG A . n B 2 284 TRP 284 261 261 TRP TRP A . n B 2 285 ILE 285 262 262 ILE ILE A . n B 2 286 ILE 286 263 263 ILE ILE A . n B 2 287 CYS 287 264 264 CYS CYS A . n B 2 288 TRP 288 265 265 TRP TRP A . n B 2 289 SER 289 266 266 SER SER A . n B 2 290 PHE 290 267 267 PHE PHE A . n B 2 291 GLN 291 268 268 GLN GLN A . n B 2 292 ALA 292 269 269 ALA ALA A . n B 2 293 MET 293 270 270 MET MET A . n B 2 294 ARG 294 271 271 ARG ARG A . n B 2 295 PRO 295 272 272 PRO PRO A . n B 2 296 HIS 296 273 273 HIS HIS A . n B 2 297 ASN 297 274 274 ASN ASN A . n B 2 298 GLU 298 275 275 GLU GLU A . n B 2 299 LEU 299 276 276 LEU LEU A . n B 2 300 ILE 300 277 277 ILE ILE A . n B 2 301 ARG 301 278 278 ARG ARG A . n B 2 302 PRO 302 279 279 PRO PRO A . n B 2 303 SER 303 280 280 SER SER A . n B 2 304 SER 304 281 281 SER SER A . n B 2 305 THR 305 282 282 THR THR A . n B 2 306 SER 306 283 283 SER SER A . n B 2 307 LEU 307 284 284 LEU LEU A . n B 2 308 SER 308 285 285 SER SER A . n B 2 309 LYS 309 286 286 LYS LYS A . n B 2 310 TYR 310 287 287 TYR TYR A . n B 2 311 PHE 311 288 288 PHE PHE A . n B 2 312 PRO 312 289 289 PRO PRO A . n B 2 313 HIS 313 290 290 HIS HIS A . n B 2 314 LYS 314 291 291 LYS LYS A . n B 2 315 VAL 315 292 292 VAL VAL A . n B 2 316 LEU 316 293 293 LEU LEU A . n B 2 317 GLN 317 294 294 GLN GLN A . n B 2 318 ASN 318 295 295 ASN ASN A . n B 2 319 TRP 319 296 296 TRP TRP A . n B 2 320 THR 320 297 297 THR THR A . n B 2 321 LEU 321 298 298 LEU LEU A . n B 2 322 ASP 322 299 299 ASP ASP A . n B 2 323 PRO 323 300 300 PRO PRO A . n B 2 324 GLU 324 301 301 GLU GLU A . n B 2 325 LEU 325 302 302 LEU LEU A . n B 2 326 CYS 326 303 303 CYS CYS A . n B 2 327 ALA 327 304 304 ALA ALA A . n B 2 328 GLN 328 305 305 GLN GLN A . n B 2 329 ILE 329 306 306 ILE ILE A . n B 2 330 ASP 330 307 307 ASP ASP A . n B 2 331 ASP 331 308 308 ASP ASP A . n B 2 332 ILE 332 309 309 ILE ILE A . n B 2 333 LEU 333 310 310 LEU LEU A . n B 2 334 GLN 334 311 311 GLN GLN A . n B 2 335 LYS 335 312 312 LYS LYS A . n B 2 336 PHE 336 313 313 PHE PHE A . n B 2 337 LEU 337 314 314 LEU LEU A . n B 2 338 ASP 338 315 315 ASP ASP A . n B 2 339 ASP 339 316 316 ASP ASP A . n B 2 340 ASN 340 317 317 ASN ASN A . n B 2 341 LYS 341 318 318 LYS LYS A . n B 2 342 ILE 342 319 319 ILE ILE A . n B 2 343 PRO 343 320 320 PRO PRO A . n B 2 344 TRP 344 321 321 TRP TRP A . n B 2 345 SER 345 322 322 SER SER A . n B 2 346 LYS 346 323 323 LYS LYS A . n B 2 347 LYS 347 324 324 LYS LYS A . n B 2 348 GLY 348 325 325 GLY GLY A . n B 2 349 SER 349 326 326 SER SER A . n B 2 350 VAL 350 327 327 VAL VAL A . n B 2 351 LEU 351 328 328 LEU LEU A . n B 2 352 GLU 352 329 329 GLU GLU A . n B 2 353 ILE 353 330 330 ILE ILE A . n B 2 354 SER 354 331 331 SER SER A . n B 2 355 THR 355 332 332 THR THR A . n B 2 356 LYS 356 333 333 LYS LYS A . n B 2 357 SER 357 334 334 SER SER A . n B 2 358 ILE 358 335 335 ILE ILE A . n B 2 359 THR 359 336 336 THR THR A . n B 2 360 TRP 360 337 337 TRP TRP A . n B 2 361 SER 361 338 338 SER SER A . n B 2 362 ARG 362 339 339 ARG ARG A . n B 2 363 LYS 363 340 340 LYS LYS A . n B 2 364 ALA 364 341 341 ALA ALA A . n B 2 365 ARG 365 342 342 ARG ARG A . n B 2 366 ARG 366 343 343 ARG ARG A . n B 2 367 ILE 367 344 344 ILE ILE A . n B 2 368 SER 368 345 345 SER SER A . n B 2 369 LYS 369 346 346 LYS LYS A . n B 2 370 SER 370 347 347 SER SER A . n B 2 371 GLN 371 348 348 GLN GLN A . n B 2 372 THR 372 349 349 THR THR A . n B 2 373 SER 373 350 350 SER SER A . n B 2 374 VAL 374 351 351 VAL VAL A . n B 2 375 SER 375 352 352 SER SER A . n B 2 376 SER 376 353 353 SER SER A . n B 2 377 LEU 377 354 354 LEU LEU A . n B 2 378 GLU 378 355 355 GLU GLU A . n B 2 379 GLY 379 356 356 GLY GLY A . n B 2 380 GLN 380 357 357 GLN GLN A . n B 2 381 MET 381 358 358 MET MET A . n B 2 382 LYS 382 359 359 LYS LYS A . n B 2 383 CYS 383 360 360 CYS CYS A . n B 2 384 GLU 384 361 361 GLU GLU A . n B 2 385 LEU 385 362 362 LEU LEU A . n B 2 386 ASN 386 363 363 ASN ASN A . n B 2 387 VAL 387 364 364 VAL VAL A . n B 2 388 ILE 388 365 365 ILE ILE A . n B 2 389 ASP 389 366 366 ASP ASP A . n B 2 390 ASN 390 367 367 ASN ASN A . n B 2 391 GLN 391 368 368 GLN GLN A . n B 2 392 LEU 392 369 369 LEU LEU A . n B 2 393 GLN 393 370 370 GLN GLN A . n B 2 394 CYS 394 371 371 CYS CYS A . n B 2 395 LYS 395 372 372 LYS LYS A . n B 2 396 TRP 396 373 373 TRP TRP A . n B 2 397 ILE 397 374 374 ILE ILE A . n B 2 398 GLU 398 375 375 GLU GLU A . n B 2 399 GLY 399 376 376 GLY GLY A . n B 2 400 TYR 400 377 377 TYR TYR A . n B 2 401 ASP 401 378 378 ASP ASP A . n B 2 402 TYR 402 379 379 TYR TYR A . n B 2 403 ASN 403 380 380 ASN ASN A . n B 2 404 VAL 404 381 381 VAL VAL A . n B 2 405 TYR 405 382 382 TYR TYR A . n B 2 406 GLU 406 383 383 GLU GLU A . n B 2 407 SER 407 384 384 SER SER A . n B 2 408 PHE 408 385 385 PHE PHE A . n B 2 409 CYS 409 386 386 CYS CYS A . n B 2 410 SER 410 387 387 SER SER A . n B 2 411 ALA 411 388 388 ALA ALA A . n B 2 412 LEU 412 389 389 LEU LEU A . n B 2 413 ALA 413 390 390 ALA ALA A . n B 2 414 ARG 414 391 391 ARG ARG A . n B 2 415 ALA 415 392 392 ALA ALA A . n B 2 416 LEU 416 393 393 LEU LEU A . n B 2 417 ARG 417 394 394 ARG ARG A . n B 2 418 ASP 418 395 395 ASP ASP A . n B 2 419 ASN 419 396 396 ASN ASN A . n B 2 420 LYS 420 397 397 LYS LYS A . n B 2 421 LYS 421 398 398 LYS LYS A . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9U47 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9U47 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9U47 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 94.59 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9U47 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0064 ? 3531 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.8934 ? 4964 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.0541 ? 580 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.0063 ? 471 ? f_plane_restr ? ? ? 'ELECTRON MICROSCOPY' ? 13.3792 ? 1464 ? f_dihedral_angle_d ? ? ? # _struct.entry_id 9U47 _struct.title 'Cryo-EM structure of spMETTL16 in complex with U6 snRNA_delta17' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9U47 _struct_keywords.text 'm6A methyltransferase, U6 snRNA, protein-RNA complex, splicing, TRANSFERASE, TRANSFERASE-RNA complex' _struct_keywords.pdbx_keywords TRANSFERASE/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 GB 3JB9_N 929984519 ? 1 ;GGUCAAAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACUGCGACAUUGAGAGAAAACCCAUU UU ; 18 2 PDB 9U47 9U47 ? 2 ? 1 3 UNP MTL16_SCHPO O42662 ? 2 ;VKNGRIDFWNEDAIRTLGKAILDRDYSLRVEFPENRLCPMVPNRATYIRYIHDLLSSTSGQKDKKRIIGLDIGTGASCIY PLLGCRMYSYDFVGTEIDKFSFETAKSNILQNNMESQIKIVLRSKQDCLLPDTEGMEEFTFVMCNPPFYEHEEDFINFKQ NPPSGVCTGVYHEMVTEGGEVGFANKILTESKKRKGIQWYTCMFGKKSSVPAVVDKLREQNISNYGIYELALGKTKRWII CWSFQAMRPHNELIRPSSTSLSKYFPHKVLQNWTLDPELCAQIDDILQKFLDDNKIPWSKKGSVLEISTKSITWSRKARR ISKSQTSVSSLEGQMKCELNVIDNQLQCKWIEGYDYNVYESFCSALARALRDNKK ; 11 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9U47 B 1 ? 82 ? 929984519 18 ? 99 ? 18 99 2 2 9U47 A 1 ? 46 ? 9U47 -22 ? 23 ? -22 23 3 3 9U47 A 47 ? 421 ? O42662 11 ? 385 ? 24 398 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 MET B 86 ? SER B 103 ? MET A 63 SER A 80 1 ? 18 HELX_P HELX_P2 AA2 CYS B 124 ? SER B 135 ? CYS A 101 SER A 112 1 ? 12 HELX_P HELX_P3 AA3 LYS B 145 ? GLN B 157 ? LYS A 122 GLN A 134 1 ? 13 HELX_P HELX_P4 AA4 GLY B 225 ? LYS B 238 ? GLY A 202 LYS A 215 1 ? 14 HELX_P HELX_P5 AA5 SER B 254 ? ARG B 264 ? SER A 231 ARG A 241 1 ? 11 HELX_P HELX_P6 AA6 HIS B 296 ? ARG B 301 ? HIS A 273 ARG A 278 1 ? 6 HELX_P HELX_P7 AA7 SER B 304 ? SER B 308 ? SER A 281 SER A 285 5 ? 5 HELX_P HELX_P8 AA8 ASP B 322 ? ASP B 339 ? ASP A 299 ASP A 316 1 ? 18 HELX_P HELX_P9 AA9 SER B 361 ? LYS B 369 ? SER A 338 LYS A 346 1 ? 9 HELX_P HELX_P10 AB1 ASP B 401 ? ASP B 418 ? ASP A 378 ASP A 395 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 26 N2 ? ? ? 1_555 A U 65 O2 ? ? B G 43 B U 82 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog2 hydrog ? ? A A 27 N1 ? ? ? 1_555 A U 64 N3 ? ? B A 44 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A A 27 N6 ? ? ? 1_555 A U 64 O4 ? ? B A 44 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 28 N3 ? ? ? 1_555 A A 63 N1 ? ? B U 45 B A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 28 O4 ? ? ? 1_555 A A 63 N6 ? ? B U 45 B A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A U 29 O2 ? ? ? 1_555 A C 62 N4 ? ? B U 46 B C 79 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog7 hydrog ? ? A A 30 N6 ? ? ? 1_555 A G 60 N3 ? ? B A 47 B G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog8 hydrog ? ? A A 30 N7 ? ? ? 1_555 A G 60 N2 ? ? B A 47 B G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog9 hydrog ? ? A G 31 N1 ? ? ? 1_555 A C 59 N3 ? ? B G 48 B C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 31 N2 ? ? ? 1_555 A C 59 O2 ? ? B G 48 B C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 31 O6 ? ? ? 1_555 A C 59 N4 ? ? B G 48 B C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 58 N1 ? ? B C 49 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 58 O6 ? ? B C 49 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 58 N2 ? ? B C 49 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 33 N1 ? ? ? 1_555 A U 57 N3 ? ? B A 50 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 33 N6 ? ? ? 1_555 A U 57 O4 ? ? B A 50 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 34 N3 ? ? ? 1_555 A A 55 N1 ? ? B U 51 B A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 34 O4 ? ? ? 1_555 A A 55 N6 ? ? B U 51 B A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 35 N1 ? ? ? 1_555 A C 54 N3 ? ? B G 52 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 35 N2 ? ? ? 1_555 A C 54 O2 ? ? B G 52 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 35 O6 ? ? ? 1_555 A C 54 N4 ? ? B G 52 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 36 N1 ? ? ? 1_555 A A 53 N1 ? ? B G 53 B A 70 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog23 hydrog ? ? A G 36 O6 ? ? ? 1_555 A A 53 N6 ? ? B G 53 B A 70 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog24 hydrog ? ? A C 37 N3 ? ? ? 1_555 A G 52 N1 ? ? B C 54 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 37 N4 ? ? ? 1_555 A G 52 O6 ? ? B C 54 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 37 O2 ? ? ? 1_555 A G 52 N2 ? ? B C 54 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 38 N4 ? ? ? 1_555 A A 50 N1 ? ? B C 55 B A 67 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog28 hydrog ? ? A C 39 N3 ? ? ? 1_555 A G 49 N1 ? ? B C 56 B G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 39 N4 ? ? ? 1_555 A G 49 O6 ? ? B C 56 B G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 39 O2 ? ? ? 1_555 A G 49 N2 ? ? B C 56 B G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 48 N1 ? ? B C 57 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 48 O6 ? ? B C 57 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 48 N2 ? ? B C 57 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A U 41 N3 ? ? ? 1_555 A A 47 N1 ? ? B U 58 B A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A U 41 O4 ? ? ? 1_555 A A 47 N6 ? ? B U 58 B A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 42 N2 ? ? ? 1_555 A A 46 N7 ? ? B G 59 B A 63 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog37 hydrog ? ? A G 42 N3 ? ? ? 1_555 A A 46 N6 ? ? B G 59 B A 63 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE B 164 ? LEU B 168 ? ILE A 141 LEU A 145 AA1 2 ASP B 137 ? GLU B 142 ? ASP A 114 GLU A 119 AA1 3 ILE B 114 ? ILE B 118 ? ILE A 91 ILE A 95 AA1 4 PHE B 187 ? CYS B 190 ? PHE A 164 CYS A 167 AA1 5 TRP B 245 ? PHE B 250 ? TRP A 222 PHE A 227 AA1 6 THR B 281 ? SER B 289 ? THR A 258 SER A 266 AA1 7 TYR B 271 ? LEU B 278 ? TYR A 248 LEU A 255 AA2 1 LEU B 316 ? TRP B 319 ? LEU A 293 TRP A 296 AA2 2 GLN B 391 ? GLU B 398 ? GLN A 368 GLU A 375 AA2 3 GLU B 378 ? ILE B 388 ? GLU A 355 ILE A 365 AA2 4 VAL B 350 ? SER B 357 ? VAL A 327 SER A 334 AA2 5 TRP B 344 ? LYS B 347 ? TRP A 321 LYS A 324 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LYS B 165 ? O LYS A 142 N GLY B 140 ? N GLY A 117 AA1 2 3 O VAL B 139 ? O VAL A 116 N GLY B 115 ? N GLY A 92 AA1 3 4 N LEU B 116 ? N LEU A 93 O MET B 189 ? O MET A 166 AA1 4 5 N VAL B 188 ? N VAL A 165 O TRP B 245 ? O TRP A 222 AA1 5 6 N CYS B 248 ? N CYS A 225 O ILE B 286 ? O ILE A 263 AA1 6 7 O THR B 281 ? O THR A 258 N LEU B 278 ? N LEU A 255 AA2 1 2 N GLN B 317 ? N GLN A 294 O CYS B 394 ? O CYS A 371 AA2 2 3 O GLN B 393 ? O GLN A 370 N ASN B 386 ? N ASN A 363 AA2 3 4 O MET B 381 ? O MET A 358 N THR B 355 ? N THR A 332 AA2 4 5 O GLU B 352 ? O GLU A 329 N SER B 345 ? N SER A 322 # _pdbx_entry_details.entry_id 9U47 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 136 ? ? 60.61 64.13 2 1 ASN A 247 ? ? -93.70 59.79 3 1 TRP A 337 ? ? -142.80 47.39 4 1 SER A 347 ? ? -117.18 -158.59 5 1 ASN A 367 ? ? 69.85 -4.53 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9U47 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # loop_ _em_3d_fitting_list.id _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.details _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id 1 1 . . . ? ? ? AlphaFold 'in silico model' ? ? 2 1 . . . ? ? ? ? ? ? ? # _em_3d_reconstruction.entry_id 9U47 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.4 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 173139 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Schizosaccharomyces pombe N6-methyladenosine methyltransferase METTL16 in complex with U6 snRNA_delta17' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_image_scans.entry_id 9U47 _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 5760 _em_image_scans.dimension_width 4092 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 9U47 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1800 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 105000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9U47 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9U47 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9U47 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B G 18 ? A G 1 2 1 Y 1 B G 19 ? A G 2 3 1 Y 1 B U 20 ? A U 3 4 1 Y 1 B C 21 ? A C 4 5 1 Y 1 B A 22 ? A A 5 6 1 Y 1 B A 23 ? A A 6 7 1 Y 1 B A 24 ? A A 7 8 1 Y 1 B U 25 ? A U 8 9 1 Y 1 B U 26 ? A U 9 10 1 Y 1 B G 27 ? A G 10 11 1 Y 1 B A 28 ? A A 11 12 1 Y 1 B A 29 ? A A 12 13 1 Y 1 B A 30 ? A A 13 14 1 Y 1 B C 31 ? A C 14 15 1 Y 1 B G 32 ? A G 15 16 1 Y 1 B A 33 ? A A 16 17 1 Y 1 B U 34 ? A U 17 18 1 Y 1 B A 35 ? A A 18 19 1 Y 1 B C 36 ? A C 19 20 1 Y 1 B A 37 ? A A 20 21 1 Y 1 B G 38 ? A G 21 22 1 Y 1 B A 39 ? A A 22 23 1 Y 1 B G 40 ? A G 23 24 1 Y 1 B G 83 ? A G 66 25 1 Y 1 B A 84 ? A A 67 26 1 Y 1 B G 85 ? A G 68 27 1 Y 1 B A 86 ? A A 69 28 1 Y 1 B G 87 ? A G 70 29 1 Y 1 B A 88 ? A A 71 30 1 Y 1 B A 89 ? A A 72 31 1 Y 1 B A 90 ? A A 73 32 1 Y 1 B A 91 ? A A 74 33 1 Y 1 B C 92 ? A C 75 34 1 Y 1 B C 93 ? A C 76 35 1 Y 1 B C 94 ? A C 77 36 1 Y 1 B A 95 ? A A 78 37 1 Y 1 B U 96 ? A U 79 38 1 Y 1 B U 97 ? A U 80 39 1 Y 1 B U 98 ? A U 81 40 1 Y 1 B U 99 ? A U 82 41 1 Y 1 A MET -22 ? B MET 1 42 1 Y 1 A GLY -21 ? B GLY 2 43 1 Y 1 A SER -20 ? B SER 3 44 1 Y 1 A SER -19 ? B SER 4 45 1 Y 1 A HIS -18 ? B HIS 5 46 1 Y 1 A HIS -17 ? B HIS 6 47 1 Y 1 A HIS -16 ? B HIS 7 48 1 Y 1 A HIS -15 ? B HIS 8 49 1 Y 1 A HIS -14 ? B HIS 9 50 1 Y 1 A HIS -13 ? B HIS 10 51 1 Y 1 A SER -12 ? B SER 11 52 1 Y 1 A SER -11 ? B SER 12 53 1 Y 1 A GLY -10 ? B GLY 13 54 1 Y 1 A LEU -9 ? B LEU 14 55 1 Y 1 A VAL -8 ? B VAL 15 56 1 Y 1 A PRO -7 ? B PRO 16 57 1 Y 1 A ARG -6 ? B ARG 17 58 1 Y 1 A GLY -5 ? B GLY 18 59 1 Y 1 A SER -4 ? B SER 19 60 1 Y 1 A HIS -3 ? B HIS 20 61 1 Y 1 A MET -2 ? B MET 21 62 1 Y 1 A ALA -1 ? B ALA 22 63 1 Y 1 A SER 0 ? B SER 23 64 1 Y 1 A MET 1 ? B MET 24 65 1 Y 1 A THR 2 ? B THR 25 66 1 Y 1 A ASP 3 ? B ASP 26 67 1 Y 1 A LYS 4 ? B LYS 27 68 1 Y 1 A THR 5 ? B THR 28 69 1 Y 1 A ASP 6 ? B ASP 29 70 1 Y 1 A ILE 7 ? B ILE 30 71 1 Y 1 A ILE 8 ? B ILE 31 72 1 Y 1 A ASN 9 ? B ASN 32 73 1 Y 1 A PHE 10 ? B PHE 33 74 1 Y 1 A ASP 11 ? B ASP 34 75 1 Y 1 A SER 12 ? B SER 35 76 1 Y 1 A LEU 13 ? B LEU 36 77 1 Y 1 A ALA 14 ? B ALA 37 78 1 Y 1 A ARG 15 ? B ARG 38 79 1 Y 1 A ASP 16 ? B ASP 39 80 1 Y 1 A TYR 17 ? B TYR 40 81 1 Y 1 A PRO 18 ? B PRO 41 82 1 Y 1 A ASP 19 ? B ASP 42 83 1 Y 1 A LEU 20 ? B LEU 43 84 1 Y 1 A ARG 21 ? B ARG 44 85 1 Y 1 A SER 22 ? B SER 45 86 1 Y 1 A PHE 23 ? B PHE 46 87 1 Y 1 A VAL 24 ? B VAL 47 88 1 Y 1 A LYS 25 ? B LYS 48 89 1 Y 1 A ASN 26 ? B ASN 49 90 1 Y 1 A GLY 27 ? B GLY 50 91 1 Y 1 A ARG 28 ? B ARG 51 92 1 Y 1 A ILE 29 ? B ILE 52 93 1 Y 1 A ASP 30 ? B ASP 53 94 1 Y 1 A PHE 31 ? B PHE 54 95 1 Y 1 A TRP 32 ? B TRP 55 96 1 Y 1 A ASN 33 ? B ASN 56 97 1 Y 1 A GLU 34 ? B GLU 57 98 1 Y 1 A ASP 35 ? B ASP 58 99 1 Y 1 A ALA 36 ? B ALA 59 100 1 Y 1 A ILE 37 ? B ILE 60 101 1 Y 1 A ARG 38 ? B ARG 61 102 1 Y 1 A THR 39 ? B THR 62 103 1 Y 1 A LEU 40 ? B LEU 63 104 1 Y 1 A GLY 41 ? B GLY 64 105 1 Y 1 A LYS 42 ? B LYS 65 106 1 Y 1 A ALA 43 ? B ALA 66 107 1 Y 1 A ILE 44 ? B ILE 67 108 1 Y 1 A LEU 45 ? B LEU 68 109 1 Y 1 A ASP 46 ? B ASP 69 110 1 Y 1 A ARG 47 ? B ARG 70 111 1 Y 1 A ASP 48 ? B ASP 71 112 1 Y 1 A TYR 49 ? B TYR 72 113 1 Y 1 A SER 50 ? B SER 73 114 1 Y 1 A LEU 51 ? B LEU 74 115 1 Y 1 A ARG 52 ? B ARG 75 116 1 Y 1 A VAL 53 ? B VAL 76 117 1 Y 1 A GLU 54 ? B GLU 77 118 1 Y 1 A PHE 55 ? B PHE 78 119 1 Y 1 A PRO 56 ? B PRO 79 120 1 Y 1 A GLU 57 ? B GLU 80 121 1 Y 1 A ASN 58 ? B ASN 81 122 1 Y 1 A ARG 59 ? B ARG 82 123 1 Y 1 A LEU 60 ? B LEU 83 124 1 Y 1 A CYS 61 ? B CYS 84 125 1 Y 1 A TYR 172 ? B TYR 195 126 1 Y 1 A GLU 173 ? B GLU 196 127 1 Y 1 A HIS 174 ? B HIS 197 128 1 Y 1 A GLU 175 ? B GLU 198 129 1 Y 1 A GLU 176 ? B GLU 199 130 1 Y 1 A ASP 177 ? B ASP 200 131 1 Y 1 A PHE 178 ? B PHE 201 132 1 Y 1 A ILE 179 ? B ILE 202 133 1 Y 1 A ASN 180 ? B ASN 203 134 1 Y 1 A PHE 181 ? B PHE 204 135 1 Y 1 A LYS 182 ? B LYS 205 136 1 Y 1 A GLN 183 ? B GLN 206 137 1 Y 1 A ASN 184 ? B ASN 207 138 1 Y 1 A PRO 185 ? B PRO 208 139 1 Y 1 A PRO 186 ? B PRO 209 140 1 Y 1 A SER 187 ? B SER 210 141 1 Y 1 A GLY 188 ? B GLY 211 142 1 Y 1 A VAL 189 ? B VAL 212 143 1 Y 1 A CYS 190 ? B CYS 213 144 1 Y 1 A THR 191 ? B THR 214 145 1 Y 1 A GLY 192 ? B GLY 215 146 1 Y 1 A VAL 193 ? B VAL 216 147 1 Y 1 A TYR 194 ? B TYR 217 148 1 Y 1 A HIS 195 ? B HIS 218 149 1 Y 1 A GLU 196 ? B GLU 219 150 1 Y 1 A MET 197 ? B MET 220 151 1 Y 1 A VAL 198 ? B VAL 221 152 1 Y 1 A THR 199 ? B THR 222 153 1 Y 1 A GLU 200 ? B GLU 223 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 U OP3 O N N 479 U P P N N 480 U OP1 O N N 481 U OP2 O N N 482 U "O5'" O N N 483 U "C5'" C N N 484 U "C4'" C N R 485 U "O4'" O N N 486 U "C3'" C N S 487 U "O3'" O N N 488 U "C2'" C N R 489 U "O2'" O N N 490 U "C1'" C N R 491 U N1 N N N 492 U C2 C N N 493 U O2 O N N 494 U N3 N N N 495 U C4 C N N 496 U O4 O N N 497 U C5 C N N 498 U C6 C N N 499 U HOP3 H N N 500 U HOP2 H N N 501 U "H5'" H N N 502 U "H5''" H N N 503 U "H4'" H N N 504 U "H3'" H N N 505 U "HO3'" H N N 506 U "H2'" H N N 507 U "HO2'" H N N 508 U "H1'" H N N 509 U H3 H N N 510 U H5 H N N 511 U H6 H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 U OP3 P sing N N 471 U OP3 HOP3 sing N N 472 U P OP1 doub N N 473 U P OP2 sing N N 474 U P "O5'" sing N N 475 U OP2 HOP2 sing N N 476 U "O5'" "C5'" sing N N 477 U "C5'" "C4'" sing N N 478 U "C5'" "H5'" sing N N 479 U "C5'" "H5''" sing N N 480 U "C4'" "O4'" sing N N 481 U "C4'" "C3'" sing N N 482 U "C4'" "H4'" sing N N 483 U "O4'" "C1'" sing N N 484 U "C3'" "O3'" sing N N 485 U "C3'" "C2'" sing N N 486 U "C3'" "H3'" sing N N 487 U "O3'" "HO3'" sing N N 488 U "C2'" "O2'" sing N N 489 U "C2'" "C1'" sing N N 490 U "C2'" "H2'" sing N N 491 U "O2'" "HO2'" sing N N 492 U "C1'" N1 sing N N 493 U "C1'" "H1'" sing N N 494 U N1 C2 sing N N 495 U N1 C6 sing N N 496 U C2 O2 doub N N 497 U C2 N3 sing N N 498 U N3 C4 sing N N 499 U N3 H3 sing N N 500 U C4 O4 doub N N 501 U C4 C5 sing N N 502 U C5 C6 doub N N 503 U C5 H5 sing N N 504 U C6 H6 sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # _em_admin.current_status REL _em_admin.deposition_date 2025-03-19 _em_admin.deposition_site PDBJ _em_admin.entry_id 9U47 _em_admin.last_update 2025-09-24 _em_admin.map_release_date 2025-08-06 _em_admin.title 'Cryo-EM structure of spMETTL16 in complex with U6 snRNA_delta17' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.ncbi_tax_id 4896 _em_entity_assembly_naturalsource.organism 'Schizosaccharomyces pombe' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 1 _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain Rosetta2 # _em_entity_assembly_synthetic.cell ? _em_entity_assembly_synthetic.cellular_location ? _em_entity_assembly_synthetic.entity_assembly_id 1 _em_entity_assembly_synthetic.id 1 _em_entity_assembly_synthetic.ncbi_tax_id 4896 _em_entity_assembly_synthetic.organ ? _em_entity_assembly_synthetic.organelle ? _em_entity_assembly_synthetic.organism 'Schizosaccharomyces pombe' _em_entity_assembly_synthetic.strain ? _em_entity_assembly_synthetic.tissue ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 1 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 6010 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 4868850 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.6.0 ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.6.0 ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? 'UCSF ChimeraX' 1.8 ? OTHER ? 8 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX 1.18.2_3874 ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC 4.6.0 ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC 4.6.0 ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC 4.6.0 ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9U47 'double helix' 9U47 'a-form double helix' 9U47 'hairpin loop' 9U47 'bulge loop' 9U47 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 26 1_555 A U 65 1_555 0.251 0.028 -0.014 -5.259 -0.851 1.853 1 B_G43:U82_B B 43 ? B 82 ? ? 1 1 A A 27 1_555 A U 64 1_555 -0.236 0.273 -0.424 -5.991 -4.244 -15.660 2 B_A44:U81_B B 44 ? B 81 ? 20 1 1 A U 28 1_555 A A 63 1_555 -0.159 -0.028 -0.147 -2.434 -3.453 -0.084 3 B_U45:A80_B B 45 ? B 80 ? 20 1 1 A U 29 1_555 A C 62 1_555 3.314 -2.115 -0.208 4.473 2.955 6.739 4 B_U46:C79_B B 46 ? B 79 ? ? ? 1 A A 30 1_555 A G 60 1_555 -6.759 -3.704 -0.535 2.786 2.068 -14.848 5 B_A47:G77_B B 47 ? B 77 ? 11 10 1 A G 31 1_555 A C 59 1_555 -0.158 -0.252 -0.388 -9.113 -4.946 -0.644 6 B_G48:C76_B B 48 ? B 76 ? 19 1 1 A C 32 1_555 A G 58 1_555 0.152 -0.133 -0.187 -2.733 -3.117 1.464 7 B_C49:G75_B B 49 ? B 75 ? 19 1 1 A A 33 1_555 A U 57 1_555 0.017 -0.171 -0.704 -5.673 -4.395 4.172 8 B_A50:U74_B B 50 ? B 74 ? 20 1 1 A U 34 1_555 A A 55 1_555 -0.082 0.024 -0.199 2.361 -7.194 -3.125 9 B_U51:A72_B B 51 ? B 72 ? 20 1 1 A G 35 1_555 A C 54 1_555 -0.046 -0.077 -0.717 -14.059 -17.103 -2.888 10 B_G52:C71_B B 52 ? B 71 ? 19 1 1 A G 36 1_555 A A 53 1_555 0.693 1.483 -0.771 -7.437 -14.004 -16.062 11 B_G53:A70_B B 53 ? B 70 ? 8 1 1 A C 37 1_555 A G 52 1_555 0.704 -0.152 -0.707 -7.661 -9.080 -3.499 12 B_C54:G69_B B 54 ? B 69 ? 19 1 1 A C 38 1_555 A A 50 1_555 -2.534 0.514 -0.909 17.453 -12.079 -3.812 13 B_C55:A67_B B 55 ? B 67 ? ? ? 1 A C 39 1_555 A G 49 1_555 0.192 -0.195 0.056 0.495 -6.215 0.916 14 B_C56:G66_B B 56 ? B 66 ? 19 1 1 A C 40 1_555 A G 48 1_555 0.134 -0.095 0.107 -1.841 -4.394 3.295 15 B_C57:G65_B B 57 ? B 65 ? 19 1 1 A U 41 1_555 A A 47 1_555 -0.019 -0.259 0.397 3.983 13.215 0.508 16 B_U58:A64_B B 58 ? B 64 ? 20 1 1 A G 42 1_555 A A 46 1_555 6.789 -4.166 0.846 19.405 12.258 0.869 17 B_G59:A63_B B 59 ? B 63 ? 11 9 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 26 1_555 A U 65 1_555 A A 27 1_555 A U 64 1_555 -2.000 -1.337 3.778 0.584 4.487 29.403 -3.657 4.033 3.500 8.775 -1.143 29.742 1 BB_G43A44:U81U82_BB B 43 ? B 82 ? B 44 ? B 81 ? 1 A A 27 1_555 A U 64 1_555 A U 28 1_555 A A 63 1_555 0.357 -1.323 3.427 -4.572 5.168 30.108 -3.496 -1.566 3.076 9.787 8.658 30.871 2 BB_A44U45:A80U81_BB B 44 ? B 81 ? B 45 ? B 80 ? 1 A U 28 1_555 A A 63 1_555 A U 29 1_555 A C 62 1_555 0.486 -0.308 3.653 -3.986 3.840 44.617 -0.787 -1.034 3.562 5.035 5.226 44.942 3 BB_U45U46:C79A80_BB B 45 ? B 80 ? B 46 ? B 79 ? 1 A U 29 1_555 A C 62 1_555 A A 30 1_555 A G 60 1_555 2.282 0.184 3.701 12.842 8.393 16.702 -3.730 0.611 4.091 23.438 -35.862 22.642 4 BB_U46A47:G77C79_BB B 46 ? B 79 ? B 47 ? B 77 ? 1 A A 30 1_555 A G 60 1_555 A G 31 1_555 A C 59 1_555 0.188 -1.162 5.204 -18.538 40.100 59.522 -3.020 -1.102 3.725 35.644 16.478 72.898 5 BB_A47G48:C76G77_BB B 47 ? B 77 ? B 48 ? B 76 ? 1 A G 31 1_555 A C 59 1_555 A C 32 1_555 A G 58 1_555 0.040 -1.946 3.057 0.324 -1.977 36.648 -2.834 -0.022 3.154 -3.141 -0.515 36.700 6 BB_G48C49:G75C76_BB B 48 ? B 76 ? B 49 ? B 75 ? 1 A C 32 1_555 A G 58 1_555 A A 33 1_555 A U 57 1_555 -0.925 -1.717 3.490 -2.809 9.913 24.983 -6.170 1.276 2.708 21.771 6.169 26.993 7 BB_C49A50:U74G75_BB B 49 ? B 75 ? B 50 ? B 74 ? 1 A A 33 1_555 A U 57 1_555 A U 34 1_555 A A 55 1_555 1.580 -2.171 2.937 -3.011 2.993 47.947 -2.865 -2.141 2.706 3.675 3.697 48.124 8 BB_A50U51:A72U74_BB B 50 ? B 74 ? B 51 ? B 72 ? 1 A U 34 1_555 A A 55 1_555 A G 35 1_555 A C 54 1_555 -0.133 -1.507 3.544 -0.724 21.799 35.152 -4.423 0.113 2.273 32.522 1.080 41.186 9 BB_U51G52:C71A72_BB B 51 ? B 72 ? B 52 ? B 71 ? 1 A G 35 1_555 A C 54 1_555 A G 36 1_555 A A 53 1_555 -1.346 -1.455 3.173 -0.899 7.195 26.311 -4.737 2.648 2.730 15.437 1.928 27.275 10 BB_G52G53:A70C71_BB B 52 ? B 71 ? B 53 ? B 70 ? 1 A G 36 1_555 A A 53 1_555 A C 37 1_555 A G 52 1_555 0.162 -1.245 3.409 1.824 3.297 30.611 -2.999 0.059 3.264 6.215 -3.438 30.836 11 BB_G53C54:G69A70_BB B 53 ? B 70 ? B 54 ? B 69 ? 1 A C 37 1_555 A G 52 1_555 A C 38 1_555 A A 50 1_555 0.868 -2.259 4.030 -33.114 31.619 32.347 -4.165 -2.756 0.655 39.080 40.928 55.553 12 BB_C54C55:A67G69_BB B 54 ? B 69 ? B 55 ? B 67 ? 1 A C 38 1_555 A A 50 1_555 A C 39 1_555 A G 49 1_555 -0.016 -1.555 3.818 -10.487 4.353 44.049 -2.456 -1.045 3.571 5.692 13.713 45.418 13 BB_C55C56:G66A67_BB B 55 ? B 67 ? B 56 ? B 66 ? 1 A C 39 1_555 A G 49 1_555 A C 40 1_555 A G 48 1_555 -0.139 -2.018 3.236 0.166 2.595 31.020 -4.239 0.289 3.060 4.842 -0.310 31.126 14 BB_C56C57:G65G66_BB B 56 ? B 66 ? B 57 ? B 65 ? 1 A C 40 1_555 A G 48 1_555 A U 41 1_555 A A 47 1_555 -0.398 -2.091 3.116 -5.043 4.645 24.685 -5.913 -0.399 2.709 10.606 11.515 25.605 15 BB_C57U58:A64G65_BB B 57 ? B 65 ? B 58 ? B 64 ? 1 A U 41 1_555 A A 47 1_555 A G 42 1_555 A A 46 1_555 0.273 -0.902 2.876 2.242 8.217 58.090 -1.289 -0.178 2.745 8.413 -2.295 58.657 16 BB_U58G59:A63A64_BB B 58 ? B 64 ? B 59 ? B 63 ? # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science (JSPS)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number 23H00368 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9U47 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ # loop_ #