data_9U5R # _entry.id 9U5R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.410 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9U5R pdb_00009u5r 10.2210/pdb9u5r/pdb WWPDB D_1300057689 ? ? EMDB EMD-63881 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-03-25 ? 2 'EM metadata' 1 0 2026-03-25 ? 3 'Additional map' 1 0 2026-03-25 1 4 'Additional map' 1 0 2026-03-25 2 5 'Additional map' 1 0 2026-03-25 3 6 FSC 1 0 2026-03-25 ? 7 'Half map' 1 0 2026-03-25 1 8 'Half map' 1 0 2026-03-25 2 9 Image 1 0 2026-03-25 ? 10 'Primary map' 1 0 2026-03-25 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 'Additional map' repository 'Initial release' ? ? 5 5 'Additional map' repository 'Initial release' ? ? 6 6 FSC repository 'Initial release' ? ? 7 7 'Half map' repository 'Initial release' ? ? 8 8 'Half map' repository 'Initial release' ? ? 9 9 Image repository 'Initial release' ? ? 10 10 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9U5R _pdbx_database_status.recvd_initial_deposition_date 2025-03-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-conformation 2' _pdbx_database_related.db_id EMD-63881 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 5 _pdbx_contact_author.email yangbei@shanghaitech.edu.cn _pdbx_contact_author.name_first Bei _pdbx_contact_author.name_last Yang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-5389-3859 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yang, B.' 1 0000-0001-5389-3859 'Wang, Q.' 2 0009-0001-4238-5303 'Sun, S.W.' 3 0009-0008-9066-9061 'Zhang, X.' 4 0000-0002-2147-5959 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'HRV14 3C in complex with single chain antibody YDF and cloverleafRNA,conformation 2' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, B.' 1 0000-0001-5389-3859 primary 'Wang, Q.' 2 0009-0001-4238-5303 primary 'Sun, S.W.' 3 0009-0008-9066-9061 primary 'Zhang, X.' 4 0000-0002-2147-5959 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protease 3C' 19836.695 1 3.4.22.28 ? ? ? 2 polymer man 'YDF heavy chain' 13833.439 1 ? ? ? ? 3 polymer man 'YDF light chain' 11299.447 1 ? ? ? ? 4 polymer syn 'RNA (83-MER)' 26533.643 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Picornain 3C,P3C' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PNTEFALSLLRKNIMTITTSKGEFTGLGIHDRVCVIPTHAQPGDDVLVNGQKIRVKDKYKLVDPENINLELTVLTLDRNE KFRDIRGFISEDLEGVDATLVVHSNNFTNTILEVGPVTMAGLINLSSTPTNRMIRYDYATKTGQCGGVLCATGKIFGIHV GGNGRQGFSAQLKKQYFVEK ; ;PNTEFALSLLRKNIMTITTSKGEFTGLGIHDRVCVIPTHAQPGDDVLVNGQKIRVKDKYKLVDPENINLELTVLTLDRNE KFRDIRGFISEDLEGVDATLVVHSNNFTNTILEVGPVTMAGLINLSSTPTNRMIRYDYATKTGQCGGVLCATGKIFGIHV GGNGRQGFSAQLKKQYFVEK ; O ? 2 'polypeptide(L)' no no ;QVQLLQSGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLY LQMNSLRAEDTAVYYCARVGKGGYDFWSGSGYMDVWGKGTTVTVSSG ; ;QVQLLQSGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLY LQMNSLRAEDTAVYYCARVGKGGYDFWSGSGYMDVWGKGTTVTVSSG ; P ? 3 'polypeptide(L)' no no ;SYVLTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAM DEADYYCQAWDSSTVVFGGGTKLTVLG ; ;SYVLTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAM DEADYYCQAWDSSTVVFGGGTKLTVLG ; Q ? 4 polyribonucleotide no no ;GGGAAACAGCGGAUGGGUAUCCCACCAUUCGACCCAUUGGGUGUAGUACUCUGGUACUAUGUACCUUUGUACGCCUGUUU CCC ; ;GGGAAACAGCGGAUGGGUAUCCCACCAUUCGACCCAUUGGGUGUAGUACUCUGGUACUAUGUACCUUUGUACGCCUGUUU CCC ; R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 ASN n 1 3 THR n 1 4 GLU n 1 5 PHE n 1 6 ALA n 1 7 LEU n 1 8 SER n 1 9 LEU n 1 10 LEU n 1 11 ARG n 1 12 LYS n 1 13 ASN n 1 14 ILE n 1 15 MET n 1 16 THR n 1 17 ILE n 1 18 THR n 1 19 THR n 1 20 SER n 1 21 LYS n 1 22 GLY n 1 23 GLU n 1 24 PHE n 1 25 THR n 1 26 GLY n 1 27 LEU n 1 28 GLY n 1 29 ILE n 1 30 HIS n 1 31 ASP n 1 32 ARG n 1 33 VAL n 1 34 CYS n 1 35 VAL n 1 36 ILE n 1 37 PRO n 1 38 THR n 1 39 HIS n 1 40 ALA n 1 41 GLN n 1 42 PRO n 1 43 GLY n 1 44 ASP n 1 45 ASP n 1 46 VAL n 1 47 LEU n 1 48 VAL n 1 49 ASN n 1 50 GLY n 1 51 GLN n 1 52 LYS n 1 53 ILE n 1 54 ARG n 1 55 VAL n 1 56 LYS n 1 57 ASP n 1 58 LYS n 1 59 TYR n 1 60 LYS n 1 61 LEU n 1 62 VAL n 1 63 ASP n 1 64 PRO n 1 65 GLU n 1 66 ASN n 1 67 ILE n 1 68 ASN n 1 69 LEU n 1 70 GLU n 1 71 LEU n 1 72 THR n 1 73 VAL n 1 74 LEU n 1 75 THR n 1 76 LEU n 1 77 ASP n 1 78 ARG n 1 79 ASN n 1 80 GLU n 1 81 LYS n 1 82 PHE n 1 83 ARG n 1 84 ASP n 1 85 ILE n 1 86 ARG n 1 87 GLY n 1 88 PHE n 1 89 ILE n 1 90 SER n 1 91 GLU n 1 92 ASP n 1 93 LEU n 1 94 GLU n 1 95 GLY n 1 96 VAL n 1 97 ASP n 1 98 ALA n 1 99 THR n 1 100 LEU n 1 101 VAL n 1 102 VAL n 1 103 HIS n 1 104 SER n 1 105 ASN n 1 106 ASN n 1 107 PHE n 1 108 THR n 1 109 ASN n 1 110 THR n 1 111 ILE n 1 112 LEU n 1 113 GLU n 1 114 VAL n 1 115 GLY n 1 116 PRO n 1 117 VAL n 1 118 THR n 1 119 MET n 1 120 ALA n 1 121 GLY n 1 122 LEU n 1 123 ILE n 1 124 ASN n 1 125 LEU n 1 126 SER n 1 127 SER n 1 128 THR n 1 129 PRO n 1 130 THR n 1 131 ASN n 1 132 ARG n 1 133 MET n 1 134 ILE n 1 135 ARG n 1 136 TYR n 1 137 ASP n 1 138 TYR n 1 139 ALA n 1 140 THR n 1 141 LYS n 1 142 THR n 1 143 GLY n 1 144 GLN n 1 145 CYS n 1 146 GLY n 1 147 GLY n 1 148 VAL n 1 149 LEU n 1 150 CYS n 1 151 ALA n 1 152 THR n 1 153 GLY n 1 154 LYS n 1 155 ILE n 1 156 PHE n 1 157 GLY n 1 158 ILE n 1 159 HIS n 1 160 VAL n 1 161 GLY n 1 162 GLY n 1 163 ASN n 1 164 GLY n 1 165 ARG n 1 166 GLN n 1 167 GLY n 1 168 PHE n 1 169 SER n 1 170 ALA n 1 171 GLN n 1 172 LEU n 1 173 LYS n 1 174 LYS n 1 175 GLN n 1 176 TYR n 1 177 PHE n 1 178 VAL n 1 179 GLU n 1 180 LYS n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 LEU n 2 6 GLN n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 VAL n 2 12 VAL n 2 13 GLN n 2 14 PRO n 2 15 GLY n 2 16 ARG n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 THR n 2 29 PHE n 2 30 SER n 2 31 SER n 2 32 TYR n 2 33 ALA n 2 34 MET n 2 35 HIS n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 VAL n 2 49 ALA n 2 50 VAL n 2 51 ILE n 2 52 SER n 2 53 TYR n 2 54 ASP n 2 55 GLY n 2 56 SER n 2 57 ASN n 2 58 LYS n 2 59 TYR n 2 60 TYR n 2 61 ALA n 2 62 ASP n 2 63 SER n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 THR n 2 70 ILE n 2 71 SER n 2 72 ARG n 2 73 ASP n 2 74 ASN n 2 75 SER n 2 76 LYS n 2 77 ASN n 2 78 THR n 2 79 LEU n 2 80 TYR n 2 81 LEU n 2 82 GLN n 2 83 MET n 2 84 ASN n 2 85 SER n 2 86 LEU n 2 87 ARG n 2 88 ALA n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ALA n 2 98 ARG n 2 99 VAL n 2 100 GLY n 2 101 LYS n 2 102 GLY n 2 103 GLY n 2 104 TYR n 2 105 ASP n 2 106 PHE n 2 107 TRP n 2 108 SER n 2 109 GLY n 2 110 SER n 2 111 GLY n 2 112 TYR n 2 113 MET n 2 114 ASP n 2 115 VAL n 2 116 TRP n 2 117 GLY n 2 118 LYS n 2 119 GLY n 2 120 THR n 2 121 THR n 2 122 VAL n 2 123 THR n 2 124 VAL n 2 125 SER n 2 126 SER n 2 127 GLY n 3 1 SER n 3 2 TYR n 3 3 VAL n 3 4 LEU n 3 5 THR n 3 6 GLN n 3 7 PRO n 3 8 PRO n 3 9 SER n 3 10 VAL n 3 11 SER n 3 12 VAL n 3 13 SER n 3 14 PRO n 3 15 GLY n 3 16 GLN n 3 17 THR n 3 18 ALA n 3 19 SER n 3 20 ILE n 3 21 THR n 3 22 CYS n 3 23 SER n 3 24 GLY n 3 25 ASP n 3 26 LYS n 3 27 LEU n 3 28 GLY n 3 29 ASP n 3 30 LYS n 3 31 TYR n 3 32 ALA n 3 33 CYS n 3 34 TRP n 3 35 TYR n 3 36 GLN n 3 37 GLN n 3 38 LYS n 3 39 PRO n 3 40 GLY n 3 41 GLN n 3 42 SER n 3 43 PRO n 3 44 VAL n 3 45 LEU n 3 46 VAL n 3 47 ILE n 3 48 TYR n 3 49 GLN n 3 50 ASP n 3 51 SER n 3 52 LYS n 3 53 ARG n 3 54 PRO n 3 55 SER n 3 56 GLY n 3 57 ILE n 3 58 PRO n 3 59 GLU n 3 60 ARG n 3 61 PHE n 3 62 SER n 3 63 GLY n 3 64 SER n 3 65 ASN n 3 66 SER n 3 67 GLY n 3 68 ASN n 3 69 THR n 3 70 ALA n 3 71 THR n 3 72 LEU n 3 73 THR n 3 74 ILE n 3 75 SER n 3 76 GLY n 3 77 THR n 3 78 GLN n 3 79 ALA n 3 80 MET n 3 81 ASP n 3 82 GLU n 3 83 ALA n 3 84 ASP n 3 85 TYR n 3 86 TYR n 3 87 CYS n 3 88 GLN n 3 89 ALA n 3 90 TRP n 3 91 ASP n 3 92 SER n 3 93 SER n 3 94 THR n 3 95 VAL n 3 96 VAL n 3 97 PHE n 3 98 GLY n 3 99 GLY n 3 100 GLY n 3 101 THR n 3 102 LYS n 3 103 LEU n 3 104 THR n 3 105 VAL n 3 106 LEU n 3 107 GLY n 4 1 G n 4 2 G n 4 3 G n 4 4 A n 4 5 A n 4 6 A n 4 7 C n 4 8 A n 4 9 G n 4 10 C n 4 11 G n 4 12 G n 4 13 A n 4 14 U n 4 15 G n 4 16 G n 4 17 G n 4 18 U n 4 19 A n 4 20 U n 4 21 C n 4 22 C n 4 23 C n 4 24 A n 4 25 C n 4 26 C n 4 27 A n 4 28 U n 4 29 U n 4 30 C n 4 31 G n 4 32 A n 4 33 C n 4 34 C n 4 35 C n 4 36 A n 4 37 U n 4 38 U n 4 39 G n 4 40 G n 4 41 G n 4 42 U n 4 43 G n 4 44 U n 4 45 A n 4 46 G n 4 47 U n 4 48 A n 4 49 C n 4 50 U n 4 51 C n 4 52 U n 4 53 G n 4 54 G n 4 55 U n 4 56 A n 4 57 C n 4 58 U n 4 59 A n 4 60 U n 4 61 G n 4 62 U n 4 63 A n 4 64 C n 4 65 C n 4 66 U n 4 67 U n 4 68 U n 4 69 G n 4 70 U n 4 71 A n 4 72 C n 4 73 G n 4 74 C n 4 75 C n 4 76 U n 4 77 G n 4 78 U n 4 79 U n 4 80 U n 4 81 C n 4 82 C n 4 83 C n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 180 ? ? ? ? ? ? ? ? ? 'rhinovirus B14' 12131 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 127 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 107 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 4 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 83 _pdbx_entity_src_syn.organism_scientific 'rhinovirus B14' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 12131 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 2 2 PRO PRO O . n A 1 2 ASN 2 3 3 ASN ASN O . n A 1 3 THR 3 4 4 THR THR O . n A 1 4 GLU 4 5 5 GLU GLU O . n A 1 5 PHE 5 6 6 PHE PHE O . n A 1 6 ALA 6 7 7 ALA ALA O . n A 1 7 LEU 7 8 8 LEU LEU O . n A 1 8 SER 8 9 9 SER SER O . n A 1 9 LEU 9 10 10 LEU LEU O . n A 1 10 LEU 10 11 11 LEU LEU O . n A 1 11 ARG 11 12 12 ARG ARG O . n A 1 12 LYS 12 13 13 LYS LYS O . n A 1 13 ASN 13 14 14 ASN ASN O . n A 1 14 ILE 14 15 15 ILE ILE O . n A 1 15 MET 15 16 16 MET MET O . n A 1 16 THR 16 17 17 THR THR O . n A 1 17 ILE 17 18 18 ILE ILE O . n A 1 18 THR 18 19 19 THR THR O . n A 1 19 THR 19 20 20 THR THR O . n A 1 20 SER 20 21 21 SER SER O . n A 1 21 LYS 21 22 22 LYS LYS O . n A 1 22 GLY 22 23 23 GLY GLY O . n A 1 23 GLU 23 24 24 GLU GLU O . n A 1 24 PHE 24 25 25 PHE PHE O . n A 1 25 THR 25 26 26 THR THR O . n A 1 26 GLY 26 27 27 GLY GLY O . n A 1 27 LEU 27 28 28 LEU LEU O . n A 1 28 GLY 28 29 29 GLY GLY O . n A 1 29 ILE 29 30 30 ILE ILE O . n A 1 30 HIS 30 31 31 HIS HIS O . n A 1 31 ASP 31 32 32 ASP ASP O . n A 1 32 ARG 32 33 33 ARG ARG O . n A 1 33 VAL 33 34 34 VAL VAL O . n A 1 34 CYS 34 35 35 CYS CYS O . n A 1 35 VAL 35 36 36 VAL VAL O . n A 1 36 ILE 36 37 37 ILE ILE O . n A 1 37 PRO 37 38 38 PRO PRO O . n A 1 38 THR 38 39 39 THR THR O . n A 1 39 HIS 39 40 40 HIS HIS O . n A 1 40 ALA 40 41 41 ALA ALA O . n A 1 41 GLN 41 42 42 GLN GLN O . n A 1 42 PRO 42 43 43 PRO PRO O . n A 1 43 GLY 43 44 44 GLY GLY O . n A 1 44 ASP 44 45 45 ASP ASP O . n A 1 45 ASP 45 46 46 ASP ASP O . n A 1 46 VAL 46 47 47 VAL VAL O . n A 1 47 LEU 47 48 48 LEU LEU O . n A 1 48 VAL 48 49 49 VAL VAL O . n A 1 49 ASN 49 50 50 ASN ASN O . n A 1 50 GLY 50 51 51 GLY GLY O . n A 1 51 GLN 51 52 52 GLN GLN O . n A 1 52 LYS 52 53 53 LYS LYS O . n A 1 53 ILE 53 54 54 ILE ILE O . n A 1 54 ARG 54 55 55 ARG ARG O . n A 1 55 VAL 55 56 56 VAL VAL O . n A 1 56 LYS 56 57 57 LYS LYS O . n A 1 57 ASP 57 58 58 ASP ASP O . n A 1 58 LYS 58 59 59 LYS LYS O . n A 1 59 TYR 59 60 60 TYR TYR O . n A 1 60 LYS 60 61 61 LYS LYS O . n A 1 61 LEU 61 62 62 LEU LEU O . n A 1 62 VAL 62 63 63 VAL VAL O . n A 1 63 ASP 63 64 64 ASP ASP O . n A 1 64 PRO 64 65 65 PRO PRO O . n A 1 65 GLU 65 66 66 GLU GLU O . n A 1 66 ASN 66 67 67 ASN ASN O . n A 1 67 ILE 67 68 68 ILE ILE O . n A 1 68 ASN 68 69 69 ASN ASN O . n A 1 69 LEU 69 70 70 LEU LEU O . n A 1 70 GLU 70 71 71 GLU GLU O . n A 1 71 LEU 71 72 72 LEU LEU O . n A 1 72 THR 72 73 73 THR THR O . n A 1 73 VAL 73 74 74 VAL VAL O . n A 1 74 LEU 74 75 75 LEU LEU O . n A 1 75 THR 75 76 76 THR THR O . n A 1 76 LEU 76 77 77 LEU LEU O . n A 1 77 ASP 77 78 78 ASP ASP O . n A 1 78 ARG 78 79 79 ARG ARG O . n A 1 79 ASN 79 80 80 ASN ASN O . n A 1 80 GLU 80 81 81 GLU GLU O . n A 1 81 LYS 81 82 82 LYS LYS O . n A 1 82 PHE 82 83 83 PHE PHE O . n A 1 83 ARG 83 84 84 ARG ARG O . n A 1 84 ASP 84 85 85 ASP ASP O . n A 1 85 ILE 85 86 86 ILE ILE O . n A 1 86 ARG 86 87 87 ARG ARG O . n A 1 87 GLY 87 88 88 GLY GLY O . n A 1 88 PHE 88 89 89 PHE PHE O . n A 1 89 ILE 89 90 90 ILE ILE O . n A 1 90 SER 90 91 91 SER SER O . n A 1 91 GLU 91 92 92 GLU GLU O . n A 1 92 ASP 92 93 93 ASP ASP O . n A 1 93 LEU 93 94 94 LEU LEU O . n A 1 94 GLU 94 95 95 GLU GLU O . n A 1 95 GLY 95 96 96 GLY GLY O . n A 1 96 VAL 96 97 97 VAL VAL O . n A 1 97 ASP 97 98 98 ASP ASP O . n A 1 98 ALA 98 99 99 ALA ALA O . n A 1 99 THR 99 100 100 THR THR O . n A 1 100 LEU 100 101 101 LEU LEU O . n A 1 101 VAL 101 102 102 VAL VAL O . n A 1 102 VAL 102 103 103 VAL VAL O . n A 1 103 HIS 103 104 104 HIS HIS O . n A 1 104 SER 104 105 105 SER SER O . n A 1 105 ASN 105 106 106 ASN ASN O . n A 1 106 ASN 106 107 107 ASN ASN O . n A 1 107 PHE 107 108 108 PHE PHE O . n A 1 108 THR 108 109 109 THR THR O . n A 1 109 ASN 109 110 110 ASN ASN O . n A 1 110 THR 110 111 111 THR THR O . n A 1 111 ILE 111 112 112 ILE ILE O . n A 1 112 LEU 112 113 113 LEU LEU O . n A 1 113 GLU 113 114 114 GLU GLU O . n A 1 114 VAL 114 115 115 VAL VAL O . n A 1 115 GLY 115 116 116 GLY GLY O . n A 1 116 PRO 116 117 117 PRO PRO O . n A 1 117 VAL 117 118 118 VAL VAL O . n A 1 118 THR 118 119 119 THR THR O . n A 1 119 MET 119 120 120 MET MET O . n A 1 120 ALA 120 121 121 ALA ALA O . n A 1 121 GLY 121 122 122 GLY GLY O . n A 1 122 LEU 122 123 123 LEU LEU O . n A 1 123 ILE 123 124 124 ILE ILE O . n A 1 124 ASN 124 125 125 ASN ASN O . n A 1 125 LEU 125 126 126 LEU LEU O . n A 1 126 SER 126 127 127 SER SER O . n A 1 127 SER 127 128 128 SER SER O . n A 1 128 THR 128 129 129 THR THR O . n A 1 129 PRO 129 130 130 PRO PRO O . n A 1 130 THR 130 131 131 THR THR O . n A 1 131 ASN 131 132 132 ASN ASN O . n A 1 132 ARG 132 133 133 ARG ARG O . n A 1 133 MET 133 134 134 MET MET O . n A 1 134 ILE 134 135 135 ILE ILE O . n A 1 135 ARG 135 136 136 ARG ARG O . n A 1 136 TYR 136 137 137 TYR TYR O . n A 1 137 ASP 137 138 138 ASP ASP O . n A 1 138 TYR 138 139 139 TYR TYR O . n A 1 139 ALA 139 140 140 ALA ALA O . n A 1 140 THR 140 141 141 THR THR O . n A 1 141 LYS 141 142 142 LYS LYS O . n A 1 142 THR 142 143 143 THR THR O . n A 1 143 GLY 143 144 144 GLY GLY O . n A 1 144 GLN 144 145 145 GLN GLN O . n A 1 145 CYS 145 146 146 CYS CYS O . n A 1 146 GLY 146 147 147 GLY GLY O . n A 1 147 GLY 147 148 148 GLY GLY O . n A 1 148 VAL 148 149 149 VAL VAL O . n A 1 149 LEU 149 150 150 LEU LEU O . n A 1 150 CYS 150 151 151 CYS CYS O . n A 1 151 ALA 151 152 152 ALA ALA O . n A 1 152 THR 152 153 153 THR THR O . n A 1 153 GLY 153 154 154 GLY GLY O . n A 1 154 LYS 154 155 155 LYS LYS O . n A 1 155 ILE 155 156 156 ILE ILE O . n A 1 156 PHE 156 157 157 PHE PHE O . n A 1 157 GLY 157 158 158 GLY GLY O . n A 1 158 ILE 158 159 159 ILE ILE O . n A 1 159 HIS 159 160 160 HIS HIS O . n A 1 160 VAL 160 161 161 VAL VAL O . n A 1 161 GLY 161 162 162 GLY GLY O . n A 1 162 GLY 162 163 163 GLY GLY O . n A 1 163 ASN 163 164 164 ASN ASN O . n A 1 164 GLY 164 165 165 GLY GLY O . n A 1 165 ARG 165 166 166 ARG ARG O . n A 1 166 GLN 166 167 167 GLN GLN O . n A 1 167 GLY 167 168 168 GLY GLY O . n A 1 168 PHE 168 169 169 PHE PHE O . n A 1 169 SER 169 170 170 SER SER O . n A 1 170 ALA 170 171 171 ALA ALA O . n A 1 171 GLN 171 172 172 GLN GLN O . n A 1 172 LEU 172 173 173 LEU LEU O . n A 1 173 LYS 173 174 174 LYS LYS O . n A 1 174 LYS 174 175 175 LYS LYS O . n A 1 175 GLN 175 176 176 GLN GLN O . n A 1 176 TYR 176 177 177 TYR TYR O . n A 1 177 PHE 177 178 178 PHE PHE O . n A 1 178 VAL 178 179 179 VAL VAL O . n A 1 179 GLU 179 180 180 GLU GLU O . n A 1 180 LYS 180 181 181 LYS LYS O . n B 2 1 GLN 1 3 3 GLN GLN P . n B 2 2 VAL 2 4 4 VAL VAL P . n B 2 3 GLN 3 5 5 GLN GLN P . n B 2 4 LEU 4 6 6 LEU LEU P . n B 2 5 LEU 5 7 7 LEU LEU P . n B 2 6 GLN 6 8 8 GLN GLN P . n B 2 7 SER 7 9 9 SER SER P . n B 2 8 GLY 8 10 10 GLY GLY P . n B 2 9 GLY 9 11 11 GLY GLY P . n B 2 10 GLY 10 12 12 GLY GLY P . n B 2 11 VAL 11 13 13 VAL VAL P . n B 2 12 VAL 12 14 14 VAL VAL P . n B 2 13 GLN 13 15 15 GLN GLN P . n B 2 14 PRO 14 16 16 PRO PRO P . n B 2 15 GLY 15 17 17 GLY GLY P . n B 2 16 ARG 16 18 18 ARG ARG P . n B 2 17 SER 17 19 19 SER SER P . n B 2 18 LEU 18 20 20 LEU LEU P . n B 2 19 ARG 19 21 21 ARG ARG P . n B 2 20 LEU 20 22 22 LEU LEU P . n B 2 21 SER 21 23 23 SER SER P . n B 2 22 CYS 22 24 24 CYS CYS P . n B 2 23 ALA 23 25 25 ALA ALA P . n B 2 24 ALA 24 26 26 ALA ALA P . n B 2 25 SER 25 27 27 SER SER P . n B 2 26 GLY 26 28 28 GLY GLY P . n B 2 27 PHE 27 29 29 PHE PHE P . n B 2 28 THR 28 30 30 THR THR P . n B 2 29 PHE 29 31 31 PHE PHE P . n B 2 30 SER 30 32 32 SER SER P . n B 2 31 SER 31 33 33 SER SER P . n B 2 32 TYR 32 34 34 TYR TYR P . n B 2 33 ALA 33 35 35 ALA ALA P . n B 2 34 MET 34 36 36 MET MET P . n B 2 35 HIS 35 37 37 HIS HIS P . n B 2 36 TRP 36 38 38 TRP TRP P . n B 2 37 VAL 37 39 39 VAL VAL P . n B 2 38 ARG 38 40 40 ARG ARG P . n B 2 39 GLN 39 41 41 GLN GLN P . n B 2 40 ALA 40 42 42 ALA ALA P . n B 2 41 PRO 41 43 43 PRO PRO P . n B 2 42 GLY 42 44 44 GLY GLY P . n B 2 43 LYS 43 45 45 LYS LYS P . n B 2 44 GLY 44 46 46 GLY GLY P . n B 2 45 LEU 45 47 47 LEU LEU P . n B 2 46 GLU 46 48 48 GLU GLU P . n B 2 47 TRP 47 49 49 TRP TRP P . n B 2 48 VAL 48 50 50 VAL VAL P . n B 2 49 ALA 49 51 51 ALA ALA P . n B 2 50 VAL 50 52 52 VAL VAL P . n B 2 51 ILE 51 53 53 ILE ILE P . n B 2 52 SER 52 54 54 SER SER P . n B 2 53 TYR 53 55 55 TYR TYR P . n B 2 54 ASP 54 56 56 ASP ASP P . n B 2 55 GLY 55 57 57 GLY GLY P . n B 2 56 SER 56 58 58 SER SER P . n B 2 57 ASN 57 59 59 ASN ASN P . n B 2 58 LYS 58 60 60 LYS LYS P . n B 2 59 TYR 59 61 61 TYR TYR P . n B 2 60 TYR 60 62 62 TYR TYR P . n B 2 61 ALA 61 63 63 ALA ALA P . n B 2 62 ASP 62 64 64 ASP ASP P . n B 2 63 SER 63 65 65 SER SER P . n B 2 64 VAL 64 66 66 VAL VAL P . n B 2 65 LYS 65 67 67 LYS LYS P . n B 2 66 GLY 66 68 68 GLY GLY P . n B 2 67 ARG 67 69 69 ARG ARG P . n B 2 68 PHE 68 70 70 PHE PHE P . n B 2 69 THR 69 71 71 THR THR P . n B 2 70 ILE 70 72 72 ILE ILE P . n B 2 71 SER 71 73 73 SER SER P . n B 2 72 ARG 72 74 74 ARG ARG P . n B 2 73 ASP 73 75 75 ASP ASP P . n B 2 74 ASN 74 76 76 ASN ASN P . n B 2 75 SER 75 77 77 SER SER P . n B 2 76 LYS 76 78 78 LYS LYS P . n B 2 77 ASN 77 79 79 ASN ASN P . n B 2 78 THR 78 80 80 THR THR P . n B 2 79 LEU 79 81 81 LEU LEU P . n B 2 80 TYR 80 82 82 TYR TYR P . n B 2 81 LEU 81 83 83 LEU LEU P . n B 2 82 GLN 82 84 84 GLN GLN P . n B 2 83 MET 83 85 85 MET MET P . n B 2 84 ASN 84 86 86 ASN ASN P . n B 2 85 SER 85 87 87 SER SER P . n B 2 86 LEU 86 88 88 LEU LEU P . n B 2 87 ARG 87 89 89 ARG ARG P . n B 2 88 ALA 88 90 90 ALA ALA P . n B 2 89 GLU 89 91 91 GLU GLU P . n B 2 90 ASP 90 92 92 ASP ASP P . n B 2 91 THR 91 93 93 THR THR P . n B 2 92 ALA 92 94 94 ALA ALA P . n B 2 93 VAL 93 95 95 VAL VAL P . n B 2 94 TYR 94 96 96 TYR TYR P . n B 2 95 TYR 95 97 97 TYR TYR P . n B 2 96 CYS 96 98 98 CYS CYS P . n B 2 97 ALA 97 99 99 ALA ALA P . n B 2 98 ARG 98 100 100 ARG ARG P . n B 2 99 VAL 99 101 101 VAL VAL P . n B 2 100 GLY 100 102 102 GLY GLY P . n B 2 101 LYS 101 103 103 LYS LYS P . n B 2 102 GLY 102 104 104 GLY GLY P . n B 2 103 GLY 103 105 105 GLY GLY P . n B 2 104 TYR 104 106 106 TYR TYR P . n B 2 105 ASP 105 107 107 ASP ASP P . n B 2 106 PHE 106 108 108 PHE PHE P . n B 2 107 TRP 107 109 109 TRP TRP P . n B 2 108 SER 108 110 110 SER SER P . n B 2 109 GLY 109 111 111 GLY GLY P . n B 2 110 SER 110 112 112 SER SER P . n B 2 111 GLY 111 113 113 GLY GLY P . n B 2 112 TYR 112 114 114 TYR TYR P . n B 2 113 MET 113 115 115 MET MET P . n B 2 114 ASP 114 116 116 ASP ASP P . n B 2 115 VAL 115 117 117 VAL VAL P . n B 2 116 TRP 116 118 118 TRP TRP P . n B 2 117 GLY 117 119 119 GLY GLY P . n B 2 118 LYS 118 120 120 LYS LYS P . n B 2 119 GLY 119 121 121 GLY GLY P . n B 2 120 THR 120 122 122 THR THR P . n B 2 121 THR 121 123 123 THR THR P . n B 2 122 VAL 122 124 124 VAL VAL P . n B 2 123 THR 123 125 125 THR THR P . n B 2 124 VAL 124 126 126 VAL VAL P . n B 2 125 SER 125 127 127 SER SER P . n B 2 126 SER 126 128 128 SER SER P . n B 2 127 GLY 127 129 129 GLY GLY P . n C 3 1 SER 1 1 1 SER SER Q . n C 3 2 TYR 2 2 2 TYR TYR Q . n C 3 3 VAL 3 3 3 VAL VAL Q . n C 3 4 LEU 4 4 4 LEU LEU Q . n C 3 5 THR 5 5 5 THR THR Q . n C 3 6 GLN 6 6 6 GLN GLN Q . n C 3 7 PRO 7 7 7 PRO PRO Q . n C 3 8 PRO 8 8 8 PRO PRO Q . n C 3 9 SER 9 9 9 SER SER Q . n C 3 10 VAL 10 10 10 VAL VAL Q . n C 3 11 SER 11 11 11 SER SER Q . n C 3 12 VAL 12 12 12 VAL VAL Q . n C 3 13 SER 13 13 13 SER SER Q . n C 3 14 PRO 14 14 14 PRO PRO Q . n C 3 15 GLY 15 15 15 GLY GLY Q . n C 3 16 GLN 16 16 16 GLN GLN Q . n C 3 17 THR 17 17 17 THR THR Q . n C 3 18 ALA 18 18 18 ALA ALA Q . n C 3 19 SER 19 19 19 SER SER Q . n C 3 20 ILE 20 20 20 ILE ILE Q . n C 3 21 THR 21 21 21 THR THR Q . n C 3 22 CYS 22 22 22 CYS CYS Q . n C 3 23 SER 23 23 23 SER SER Q . n C 3 24 GLY 24 24 24 GLY GLY Q . n C 3 25 ASP 25 25 25 ASP ASP Q . n C 3 26 LYS 26 26 26 LYS LYS Q . n C 3 27 LEU 27 27 27 LEU LEU Q . n C 3 28 GLY 28 28 28 GLY GLY Q . n C 3 29 ASP 29 29 29 ASP ASP Q . n C 3 30 LYS 30 30 30 LYS LYS Q . n C 3 31 TYR 31 31 31 TYR TYR Q . n C 3 32 ALA 32 32 32 ALA ALA Q . n C 3 33 CYS 33 33 33 CYS CYS Q . n C 3 34 TRP 34 34 34 TRP TRP Q . n C 3 35 TYR 35 35 35 TYR TYR Q . n C 3 36 GLN 36 36 36 GLN GLN Q . n C 3 37 GLN 37 37 37 GLN GLN Q . n C 3 38 LYS 38 38 38 LYS LYS Q . n C 3 39 PRO 39 39 39 PRO PRO Q . n C 3 40 GLY 40 40 40 GLY GLY Q . n C 3 41 GLN 41 41 41 GLN GLN Q . n C 3 42 SER 42 42 42 SER SER Q . n C 3 43 PRO 43 43 43 PRO PRO Q . n C 3 44 VAL 44 44 44 VAL VAL Q . n C 3 45 LEU 45 45 45 LEU LEU Q . n C 3 46 VAL 46 46 46 VAL VAL Q . n C 3 47 ILE 47 47 47 ILE ILE Q . n C 3 48 TYR 48 48 48 TYR TYR Q . n C 3 49 GLN 49 49 49 GLN GLN Q . n C 3 50 ASP 50 50 50 ASP ASP Q . n C 3 51 SER 51 51 51 SER SER Q . n C 3 52 LYS 52 52 52 LYS LYS Q . n C 3 53 ARG 53 53 53 ARG ARG Q . n C 3 54 PRO 54 54 54 PRO PRO Q . n C 3 55 SER 55 55 55 SER SER Q . n C 3 56 GLY 56 56 56 GLY GLY Q . n C 3 57 ILE 57 57 57 ILE ILE Q . n C 3 58 PRO 58 58 58 PRO PRO Q . n C 3 59 GLU 59 59 59 GLU GLU Q . n C 3 60 ARG 60 60 60 ARG ARG Q . n C 3 61 PHE 61 61 61 PHE PHE Q . n C 3 62 SER 62 62 62 SER SER Q . n C 3 63 GLY 63 63 63 GLY GLY Q . n C 3 64 SER 64 64 64 SER SER Q . n C 3 65 ASN 65 65 65 ASN ASN Q . n C 3 66 SER 66 66 66 SER SER Q . n C 3 67 GLY 67 67 67 GLY GLY Q . n C 3 68 ASN 68 68 68 ASN ASN Q . n C 3 69 THR 69 69 69 THR THR Q . n C 3 70 ALA 70 70 70 ALA ALA Q . n C 3 71 THR 71 71 71 THR THR Q . n C 3 72 LEU 72 72 72 LEU LEU Q . n C 3 73 THR 73 73 73 THR THR Q . n C 3 74 ILE 74 74 74 ILE ILE Q . n C 3 75 SER 75 75 75 SER SER Q . n C 3 76 GLY 76 76 76 GLY GLY Q . n C 3 77 THR 77 77 77 THR THR Q . n C 3 78 GLN 78 78 78 GLN GLN Q . n C 3 79 ALA 79 79 79 ALA ALA Q . n C 3 80 MET 80 80 80 MET MET Q . n C 3 81 ASP 81 81 81 ASP ASP Q . n C 3 82 GLU 82 82 82 GLU GLU Q . n C 3 83 ALA 83 83 83 ALA ALA Q . n C 3 84 ASP 84 84 84 ASP ASP Q . n C 3 85 TYR 85 85 85 TYR TYR Q . n C 3 86 TYR 86 86 86 TYR TYR Q . n C 3 87 CYS 87 87 87 CYS CYS Q . n C 3 88 GLN 88 88 88 GLN GLN Q . n C 3 89 ALA 89 89 89 ALA ALA Q . n C 3 90 TRP 90 90 90 TRP TRP Q . n C 3 91 ASP 91 91 91 ASP ASP Q . n C 3 92 SER 92 92 92 SER SER Q . n C 3 93 SER 93 93 93 SER SER Q . n C 3 94 THR 94 94 94 THR THR Q . n C 3 95 VAL 95 95 95 VAL VAL Q . n C 3 96 VAL 96 96 96 VAL VAL Q . n C 3 97 PHE 97 97 97 PHE PHE Q . n C 3 98 GLY 98 98 98 GLY GLY Q . n C 3 99 GLY 99 99 99 GLY GLY Q . n C 3 100 GLY 100 100 100 GLY GLY Q . n C 3 101 THR 101 101 101 THR THR Q . n C 3 102 LYS 102 102 102 LYS LYS Q . n C 3 103 LEU 103 103 103 LEU LEU Q . n C 3 104 THR 104 104 104 THR THR Q . n C 3 105 VAL 105 105 105 VAL VAL Q . n C 3 106 LEU 106 106 106 LEU LEU Q . n C 3 107 GLY 107 107 107 GLY GLY Q . n D 4 1 G 1 1 1 G G R . n D 4 2 G 2 2 2 G G R . n D 4 3 G 3 3 3 G G R . n D 4 4 A 4 4 4 A A R . n D 4 5 A 5 5 5 A A R . n D 4 6 A 6 6 6 A A R . n D 4 7 C 7 7 7 C C R . n D 4 8 A 8 8 8 A A R . n D 4 9 G 9 9 9 G G R . n D 4 10 C 10 10 10 C C R . n D 4 11 G 11 11 11 G G R . n D 4 12 G 12 12 12 G G R . n D 4 13 A 13 13 13 A A R . n D 4 14 U 14 14 14 U U R . n D 4 15 G 15 15 15 G G R . n D 4 16 G 16 16 16 G G R . n D 4 17 G 17 17 ? ? ? R . n D 4 18 U 18 18 ? ? ? R . n D 4 19 A 19 19 ? ? ? R . n D 4 20 U 20 20 ? ? ? R . n D 4 21 C 21 21 ? ? ? R . n D 4 22 C 22 22 ? ? ? R . n D 4 23 C 23 23 ? ? ? R . n D 4 24 A 24 24 ? ? ? R . n D 4 25 C 25 25 25 C C R . n D 4 26 C 26 26 26 C C R . n D 4 27 A 27 27 27 A A R . n D 4 28 U 28 28 28 U U R . n D 4 29 U 29 29 29 U U R . n D 4 30 C 30 30 30 C C R . n D 4 31 G 31 31 31 G G R . n D 4 32 A 32 32 32 A A R . n D 4 33 C 33 33 33 C C R . n D 4 34 C 34 34 34 C C R . n D 4 35 C 35 35 35 C C R . n D 4 36 A 36 36 36 A A R . n D 4 37 U 37 37 37 U U R . n D 4 38 U 38 38 38 U U R . n D 4 39 G 39 39 39 G G R . n D 4 40 G 40 40 40 G G R . n D 4 41 G 41 41 41 G G R . n D 4 42 U 42 42 42 U U R . n D 4 43 G 43 43 43 G G R . n D 4 44 U 44 44 44 U U R . n D 4 45 A 45 45 45 A A R . n D 4 46 G 46 46 46 G G R . n D 4 47 U 47 47 47 U U R . n D 4 48 A 48 48 48 A A R . n D 4 49 C 49 49 49 C C R . n D 4 50 U 50 50 50 U U R . n D 4 51 C 51 51 51 C C R . n D 4 52 U 52 52 52 U U R . n D 4 53 G 53 53 53 G G R . n D 4 54 G 54 54 54 G G R . n D 4 55 U 55 55 55 U U R . n D 4 56 A 56 56 56 A A R . n D 4 57 C 57 57 57 C C R . n D 4 58 U 58 58 58 U U R . n D 4 59 A 59 59 59 A A R . n D 4 60 U 60 60 60 U U R . n D 4 61 G 61 61 61 G G R . n D 4 62 U 62 62 62 U U R . n D 4 63 A 63 63 63 A A R . n D 4 64 C 64 64 64 C C R . n D 4 65 C 65 65 65 C C R . n D 4 66 U 66 66 66 U U R . n D 4 67 U 67 67 67 U U R . n D 4 68 U 68 68 68 U U R . n D 4 69 G 69 69 69 G G R . n D 4 70 U 70 70 70 U U R . n D 4 71 A 71 71 71 A A R . n D 4 72 C 72 72 72 C C R . n D 4 73 G 73 73 73 G G R . n D 4 74 C 74 74 74 C C R . n D 4 75 C 75 75 75 C C R . n D 4 76 U 76 76 76 U U R . n D 4 77 G 77 77 77 G G R . n D 4 78 U 78 78 78 U U R . n D 4 79 U 79 79 79 U U R . n D 4 80 U 80 80 80 U U R . n D 4 81 C 81 81 81 C C R . n D 4 82 C 82 82 82 C C R . n D 4 83 C 83 83 83 C C R . n # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id R _pdbx_unobs_or_zero_occ_atoms.auth_comp_id G _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 16 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id OP2 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id D _pdbx_unobs_or_zero_occ_atoms.label_comp_id G _pdbx_unobs_or_zero_occ_atoms.label_seq_id 16 _pdbx_unobs_or_zero_occ_atoms.label_atom_id OP2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9U5R _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9U5R _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9U5R _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9U5R _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.59 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 4987 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.638 ? 7106 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 12.033 ? 1342 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.039 ? 860 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.005 ? 635 ? f_plane_restr ? ? ? # _struct.entry_id 9U5R _struct.title 'HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-conformation 2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9U5R _struct_keywords.text 'cloverleafRNA, 3c, complex, RNA BINDING PROTEIN/IMMUNE SYSTEM/RNA, RNA BINDING PROTEIN-IMMUNE SYSTEM-RNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/IMMUNE SYSTEM/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP POLG_HRV14 P03303 ? 1 ;PNTEFALSLLRKNIMTITTSKGEFTGLGIHDRVCVIPTHAQPGDDVLVNGQKIRVKDKYKLVDPENINLELTVLTLDRNE KFRDIRGFISEDLEGVDATLVVHSNNFTNTILEVGPVTMAGLINLSSTPTNRMIRYDYATKTGQCGGVLCATGKIFGIHV GGNGRQGFSAQLKKQYFVEK ; 1539 2 PDB 9U5R 9U5R ? 2 ? 1 3 PDB 9U5R 9U5R ? 3 ? 1 4 PDB 9U5R 9U5R ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9U5R O 1 ? 180 ? P03303 1539 ? 1718 ? 2 181 2 2 9U5R P 1 ? 127 ? 9U5R 3 ? 129 ? 3 129 3 3 9U5R Q 1 ? 107 ? 9U5R 1 ? 107 ? 1 107 4 4 9U5R R 1 ? 83 ? 9U5R 1 ? 83 ? 1 83 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 2 ? ASN A 13 ? ASN O 3 ASN O 14 1 ? 12 HELX_P HELX_P2 AA2 PRO A 37 ? GLN A 41 ? PRO O 38 GLN O 42 5 ? 5 HELX_P HELX_P3 AA3 ILE A 85 ? ILE A 89 ? ILE O 86 ILE O 90 5 ? 5 HELX_P HELX_P4 AA4 ARG B 87 ? THR B 91 ? ARG P 89 THR P 93 5 ? 5 HELX_P HELX_P5 AA5 LYS C 26 ? LYS C 30 ? LYS Q 26 LYS Q 30 5 ? 5 HELX_P HELX_P6 AA6 GLN C 78 ? GLU C 82 ? GLN Q 78 GLU Q 82 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? P CYS 24 P CYS 98 1_555 ? ? ? ? ? ? ? 2.989 ? ? hydrog1 hydrog ? ? D G 1 N1 ? ? ? 1_555 D C 83 N3 ? ? R G 1 R C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? D G 1 N2 ? ? ? 1_555 D C 83 O2 ? ? R G 1 R C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D G 1 O6 ? ? ? 1_555 D C 83 N4 ? ? R G 1 R C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D G 2 N1 ? ? ? 1_555 D C 82 N3 ? ? R G 2 R C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D G 2 N2 ? ? ? 1_555 D C 82 O2 ? ? R G 2 R C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D G 2 O6 ? ? ? 1_555 D C 82 N4 ? ? R G 2 R C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D G 3 N1 ? ? ? 1_555 D C 81 N3 ? ? R G 3 R C 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D G 3 N2 ? ? ? 1_555 D C 81 O2 ? ? R G 3 R C 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D G 3 O6 ? ? ? 1_555 D C 81 N4 ? ? R G 3 R C 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D A 4 N1 ? ? ? 1_555 D U 80 N3 ? ? R A 4 R U 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D A 4 N6 ? ? ? 1_555 D U 80 O4 ? ? R A 4 R U 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D A 5 N1 ? ? ? 1_555 D U 79 N3 ? ? R A 5 R U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D A 5 N6 ? ? ? 1_555 D U 79 O4 ? ? R A 5 R U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D A 6 N1 ? ? ? 1_555 D U 78 N3 ? ? R A 6 R U 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? D A 6 N6 ? ? ? 1_555 D U 78 O4 ? ? R A 6 R U 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? D C 7 N3 ? ? ? 1_555 D G 77 N1 ? ? R C 7 R G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? D C 7 N4 ? ? ? 1_555 D G 77 O6 ? ? R C 7 R G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? D C 7 O2 ? ? ? 1_555 D G 77 N2 ? ? R C 7 R G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? D C 7 N3 ? ? ? 1_555 D U 78 N3 ? ? R C 7 R U 78 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog20 hydrog ? ? D C 7 N4 ? ? ? 1_555 D U 78 O4 ? ? R C 7 R U 78 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog21 hydrog ? ? D A 8 N1 ? ? ? 1_555 D G 77 N1 ? ? R A 8 R G 77 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog22 hydrog ? ? D G 9 N2 ? ? ? 1_555 D U 76 O2 ? ? R G 9 R U 76 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog23 hydrog ? ? D C 10 N3 ? ? ? 1_555 D G 31 N1 ? ? R C 10 R G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? D C 10 N4 ? ? ? 1_555 D G 31 O6 ? ? R C 10 R G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? D C 10 O2 ? ? ? 1_555 D G 31 N2 ? ? R C 10 R G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? D G 11 N1 ? ? ? 1_555 D C 30 N3 ? ? R G 11 R C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? D G 11 N2 ? ? ? 1_555 D C 30 O2 ? ? R G 11 R C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? D G 11 O6 ? ? ? 1_555 D C 30 N4 ? ? R G 11 R C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? D G 12 N1 ? ? ? 1_555 D U 29 O4 ? ? R G 12 R U 29 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog30 hydrog ? ? D G 12 O6 ? ? ? 1_555 D U 29 N3 ? ? R G 12 R U 29 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog31 hydrog ? ? D A 13 N1 ? ? ? 1_555 D U 28 N3 ? ? R A 13 R U 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? D A 13 N6 ? ? ? 1_555 D U 28 O4 ? ? R A 13 R U 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? D U 14 N3 ? ? ? 1_555 D A 27 N1 ? ? R U 14 R A 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? D U 14 O4 ? ? ? 1_555 D A 27 N6 ? ? R U 14 R A 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? D G 15 N1 ? ? ? 1_555 D C 26 N3 ? ? R G 15 R C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? D G 15 N2 ? ? ? 1_555 D C 26 O2 ? ? R G 15 R C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? D G 15 O6 ? ? ? 1_555 D C 26 N4 ? ? R G 15 R C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? D A 32 N1 ? ? ? 1_555 D U 42 N3 ? ? R A 32 R U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? D A 32 N6 ? ? ? 1_555 D U 42 O4 ? ? R A 32 R U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? D C 33 N3 ? ? ? 1_555 D G 41 N1 ? ? R C 33 R G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? D C 33 N4 ? ? ? 1_555 D G 41 O6 ? ? R C 33 R G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? D C 33 O2 ? ? ? 1_555 D G 41 N2 ? ? R C 33 R G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? D C 34 N3 ? ? ? 1_555 D G 40 N1 ? ? R C 34 R G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? D C 34 N4 ? ? ? 1_555 D G 40 O6 ? ? R C 34 R G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? D C 34 O2 ? ? ? 1_555 D G 40 N2 ? ? R C 34 R G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? D C 35 N3 ? ? ? 1_555 D G 39 N1 ? ? R C 35 R G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? D C 35 N4 ? ? ? 1_555 D G 39 O6 ? ? R C 35 R G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? D C 35 O2 ? ? ? 1_555 D G 39 N2 ? ? R C 35 R G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? D A 36 N6 ? ? ? 1_555 D U 68 O2 ? ? R A 36 R U 68 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog50 hydrog ? ? D A 45 N1 ? ? ? 1_555 D G 73 N1 ? ? R A 45 R G 73 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog51 hydrog ? ? D A 45 N6 ? ? ? 1_555 D G 73 O6 ? ? R A 45 R G 73 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog52 hydrog ? ? D G 46 N1 ? ? ? 1_555 D C 72 N3 ? ? R G 46 R C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? D G 46 N2 ? ? ? 1_555 D C 72 O2 ? ? R G 46 R C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? D G 46 O6 ? ? ? 1_555 D C 72 N4 ? ? R G 46 R C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? D U 47 N3 ? ? ? 1_555 D A 71 N1 ? ? R U 47 R A 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? D U 47 O4 ? ? ? 1_555 D A 71 N6 ? ? R U 47 R A 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? D A 48 N1 ? ? ? 1_555 D U 70 N3 ? ? R A 48 R U 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? D A 48 N6 ? ? ? 1_555 D U 70 O4 ? ? R A 48 R U 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? D C 49 N3 ? ? ? 1_555 D G 69 N1 ? ? R C 49 R G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? D C 49 N4 ? ? ? 1_555 D G 69 O6 ? ? R C 49 R G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? D C 49 O2 ? ? ? 1_555 D G 69 N2 ? ? R C 49 R G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? D U 50 O2 ? ? ? 1_555 D G 69 N2 ? ? R U 50 R G 69 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog63 hydrog ? ? D C 51 N4 ? ? ? 1_555 D U 68 O2 ? ? R C 51 R U 68 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog64 hydrog ? ? D G 53 N1 ? ? ? 1_555 D C 65 N3 ? ? R G 53 R C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? D G 53 N2 ? ? ? 1_555 D C 65 O2 ? ? R G 53 R C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? D G 53 O6 ? ? ? 1_555 D C 65 N4 ? ? R G 53 R C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? D G 54 N1 ? ? ? 1_555 D C 64 N3 ? ? R G 54 R C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? D G 54 N2 ? ? ? 1_555 D C 64 O2 ? ? R G 54 R C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? D G 54 O6 ? ? ? 1_555 D C 64 N4 ? ? R G 54 R C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? D U 55 N3 ? ? ? 1_555 D A 63 N1 ? ? R U 55 R A 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? D U 55 O4 ? ? ? 1_555 D A 63 N6 ? ? R U 55 R A 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? D A 56 N1 ? ? ? 1_555 D U 62 N3 ? ? R A 56 R U 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? D A 56 N6 ? ? ? 1_555 D U 62 O4 ? ? R A 56 R U 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? D C 57 N3 ? ? ? 1_555 D G 61 N1 ? ? R C 57 R G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? D C 57 N4 ? ? ? 1_555 D G 61 O6 ? ? R C 57 R G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? D C 57 O2 ? ? ? 1_555 D G 61 N2 ? ? R C 57 R G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? hydrog ? ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id 22 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id B _pdbx_modification_feature.modified_residue_label_seq_id 96 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id P _pdbx_modification_feature.auth_seq_id 24 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id P _pdbx_modification_feature.modified_residue_auth_seq_id 98 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 8 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 6 ? AA6 ? 4 ? AA7 ? 5 ? AA8 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 14 ? THR A 19 ? ILE O 15 THR O 20 AA1 2 GLY A 22 ? HIS A 30 ? GLY O 23 HIS O 31 AA1 3 VAL A 33 ? ILE A 36 ? VAL O 34 ILE O 37 AA1 4 ILE A 67 ? LEU A 76 ? ILE O 68 LEU O 77 AA1 5 GLN A 51 ? ASP A 63 ? GLN O 52 ASP O 64 AA1 6 ASP A 45 ? VAL A 48 ? ASP O 46 VAL O 49 AA1 7 ILE A 14 ? THR A 19 ? ILE O 15 THR O 20 AA2 1 THR A 118 ? MET A 119 ? THR O 119 MET O 120 AA2 2 MET A 133 ? ASP A 137 ? MET O 134 ASP O 138 AA2 3 GLN A 166 ? GLN A 171 ? GLN O 167 GLN O 172 AA2 4 LYS A 154 ? GLY A 162 ? LYS O 155 GLY O 163 AA2 5 VAL A 148 ? ALA A 151 ? VAL O 149 ALA O 152 AA2 6 THR A 99 ? SER A 104 ? THR O 100 SER O 105 AA2 7 PHE A 107 ? LEU A 112 ? PHE O 108 LEU O 113 AA2 8 GLY B 103 ? ASP B 105 ? GLY P 105 ASP P 107 AA3 1 LEU A 122 ? LEU A 125 ? LEU O 123 LEU O 126 AA3 2 THR A 128 ? ASN A 131 ? THR O 129 ASN O 132 AA4 1 GLN B 3 ? GLY B 8 ? GLN P 5 GLY P 10 AA4 2 LEU B 18 ? SER B 25 ? LEU P 20 SER P 27 AA4 3 THR B 78 ? MET B 83 ? THR P 80 MET P 85 AA4 4 PHE B 68 ? ASP B 73 ? PHE P 70 ASP P 75 AA5 1 GLY B 10 ? VAL B 12 ? GLY P 12 VAL P 14 AA5 2 THR B 120 ? VAL B 124 ? THR P 122 VAL P 126 AA5 3 ALA B 92 ? ALA B 97 ? ALA P 94 ALA P 99 AA5 4 MET B 34 ? GLN B 39 ? MET P 36 GLN P 41 AA5 5 LEU B 45 ? ILE B 51 ? LEU P 47 ILE P 53 AA5 6 LYS B 58 ? TYR B 60 ? LYS P 60 TYR P 62 AA6 1 LEU C 4 ? THR C 5 ? LEU Q 4 THR Q 5 AA6 2 ALA C 18 ? GLY C 24 ? ALA Q 18 GLY Q 24 AA6 3 THR C 69 ? ILE C 74 ? THR Q 69 ILE Q 74 AA6 4 PHE C 61 ? SER C 66 ? PHE Q 61 SER Q 66 AA7 1 SER C 9 ? SER C 11 ? SER Q 9 SER Q 11 AA7 2 THR C 101 ? THR C 104 ? THR Q 101 THR Q 104 AA7 3 ASP C 84 ? ASP C 91 ? ASP Q 84 ASP Q 91 AA7 4 TYR C 31 ? GLN C 37 ? TYR Q 31 GLN Q 37 AA7 5 VAL C 44 ? ILE C 47 ? VAL Q 44 ILE Q 47 AA8 1 SER C 9 ? SER C 11 ? SER Q 9 SER Q 11 AA8 2 THR C 101 ? THR C 104 ? THR Q 101 THR Q 104 AA8 3 ASP C 84 ? ASP C 91 ? ASP Q 84 ASP Q 91 AA8 4 THR C 94 ? PHE C 97 ? THR Q 94 PHE Q 97 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N MET A 15 ? N MET O 16 O GLY A 26 ? O GLY O 27 AA1 2 3 N ILE A 29 ? N ILE O 30 O VAL A 33 ? O VAL O 34 AA1 3 4 N ILE A 36 ? N ILE O 37 O THR A 72 ? O THR O 73 AA1 4 5 O ILE A 67 ? O ILE O 68 N ASP A 63 ? N ASP O 64 AA1 5 6 O ILE A 53 ? O ILE O 54 N VAL A 46 ? N VAL O 47 AA1 6 7 O LEU A 47 ? O LEU O 48 N THR A 18 ? N THR O 19 AA2 1 2 N THR A 118 ? N THR O 119 O ARG A 135 ? O ARG O 136 AA2 2 3 N TYR A 136 ? N TYR O 137 O GLY A 167 ? O GLY O 168 AA2 3 4 O PHE A 168 ? O PHE O 169 N GLY A 161 ? N GLY O 162 AA2 4 5 O GLY A 157 ? O GLY O 158 N LEU A 149 ? N LEU O 150 AA2 5 6 O CYS A 150 ? O CYS O 151 N THR A 99 ? N THR O 100 AA2 6 7 N VAL A 102 ? N VAL O 103 O THR A 110 ? O THR O 111 AA2 7 8 N ILE A 111 ? N ILE O 112 O TYR B 104 ? O TYR P 106 AA3 1 2 N LEU A 125 ? N LEU O 126 O THR A 128 ? O THR O 129 AA4 1 2 N GLN B 3 ? N GLN P 5 O SER B 25 ? O SER P 27 AA4 2 3 N LEU B 18 ? N LEU P 20 O MET B 83 ? O MET P 85 AA4 3 4 O TYR B 80 ? O TYR P 82 N SER B 71 ? N SER P 73 AA5 1 2 N VAL B 12 ? N VAL P 14 O THR B 123 ? O THR P 125 AA5 2 3 O VAL B 122 ? O VAL P 124 N ALA B 92 ? N ALA P 94 AA5 3 4 O TYR B 95 ? O TYR P 97 N VAL B 37 ? N VAL P 39 AA5 4 5 N ARG B 38 ? N ARG P 40 O GLU B 46 ? O GLU P 48 AA5 5 6 N VAL B 50 ? N VAL P 52 O TYR B 59 ? O TYR P 61 AA6 1 2 N THR C 5 ? N THR Q 5 O SER C 23 ? O SER Q 23 AA6 2 3 N ILE C 20 ? N ILE Q 20 O LEU C 72 ? O LEU Q 72 AA6 3 4 O THR C 73 ? O THR Q 73 N SER C 62 ? N SER Q 62 AA7 1 2 N VAL C 10 ? N VAL Q 10 O LYS C 102 ? O LYS Q 102 AA7 2 3 O THR C 101 ? O THR Q 101 N TYR C 85 ? N TYR Q 85 AA7 3 4 O ASP C 84 ? O ASP Q 84 N GLN C 37 ? N GLN Q 37 AA7 4 5 N GLN C 36 ? N GLN Q 36 O VAL C 44 ? O VAL Q 44 AA8 1 2 N VAL C 10 ? N VAL Q 10 O LYS C 102 ? O LYS Q 102 AA8 2 3 O THR C 101 ? O THR Q 101 N TYR C 85 ? N TYR Q 85 AA8 3 4 N ALA C 89 ? N ALA Q 89 O VAL C 96 ? O VAL Q 96 # _pdbx_entry_details.entry_id 9U5R _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP O 32 ? ? 53.63 -110.43 2 1 GLN O 42 ? ? 48.91 71.88 3 1 LEU O 94 ? ? -93.08 52.19 4 1 ASN O 106 ? ? 57.49 -132.22 5 1 VAL P 50 ? ? -120.21 -62.39 6 1 ALA P 94 ? ? -167.12 -168.69 7 1 ASP P 116 ? ? -122.59 -50.71 8 1 GLN Q 49 ? ? 55.54 -110.08 9 1 ALA Q 83 ? ? -163.04 -166.11 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9U5R _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' # _em_3d_reconstruction.entry_id 9U5R _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.59 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 198810 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name dimer3C-YDF-RNA-C2 _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3, 4' # _em_imaging.entry_id 9U5R _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 1500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9U5R _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 281.15 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9U5R _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 R G 17 ? D G 17 2 1 Y 1 R U 18 ? D U 18 3 1 Y 1 R A 19 ? D A 19 4 1 Y 1 R U 20 ? D U 20 5 1 Y 1 R C 21 ? D C 21 6 1 Y 1 R C 22 ? D C 22 7 1 Y 1 R C 23 ? D C 23 8 1 Y 1 R A 24 ? D A 24 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 U OP3 O N N 479 U P P N N 480 U OP1 O N N 481 U OP2 O N N 482 U "O5'" O N N 483 U "C5'" C N N 484 U "C4'" C N R 485 U "O4'" O N N 486 U "C3'" C N S 487 U "O3'" O N N 488 U "C2'" C N R 489 U "O2'" O N N 490 U "C1'" C N R 491 U N1 N N N 492 U C2 C N N 493 U O2 O N N 494 U N3 N N N 495 U C4 C N N 496 U O4 O N N 497 U C5 C N N 498 U C6 C N N 499 U HOP3 H N N 500 U HOP2 H N N 501 U "H5'" H N N 502 U "H5''" H N N 503 U "H4'" H N N 504 U "H3'" H N N 505 U "HO3'" H N N 506 U "H2'" H N N 507 U "HO2'" H N N 508 U "H1'" H N N 509 U H3 H N N 510 U H5 H N N 511 U H6 H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 U OP3 P sing N N 471 U OP3 HOP3 sing N N 472 U P OP1 doub N N 473 U P OP2 sing N N 474 U P "O5'" sing N N 475 U OP2 HOP2 sing N N 476 U "O5'" "C5'" sing N N 477 U "C5'" "C4'" sing N N 478 U "C5'" "H5'" sing N N 479 U "C5'" "H5''" sing N N 480 U "C4'" "O4'" sing N N 481 U "C4'" "C3'" sing N N 482 U "C4'" "H4'" sing N N 483 U "O4'" "C1'" sing N N 484 U "C3'" "O3'" sing N N 485 U "C3'" "C2'" sing N N 486 U "C3'" "H3'" sing N N 487 U "O3'" "HO3'" sing N N 488 U "C2'" "O2'" sing N N 489 U "C2'" "C1'" sing N N 490 U "C2'" "H2'" sing N N 491 U "O2'" "HO2'" sing N N 492 U "C1'" N1 sing N N 493 U "C1'" "H1'" sing N N 494 U N1 C2 sing N N 495 U N1 C6 sing N N 496 U C2 O2 doub N N 497 U C2 N3 sing N N 498 U N3 C4 sing N N 499 U N3 H3 sing N N 500 U C4 O4 doub N N 501 U C4 C5 sing N N 502 U C5 C6 doub N N 503 U C5 H5 sing N N 504 U C6 H6 sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # _em_admin.current_status REL _em_admin.deposition_date 2025-03-21 _em_admin.deposition_site PDBJ _em_admin.entry_id 9U5R _em_admin.last_update 2026-03-25 _em_admin.map_release_date 2026-03-25 _em_admin.title 'HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-conformation 2' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 12131 _em_entity_assembly_naturalsource.organism 'rhinovirus B14' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 511693 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60.0 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'DIRECT ELECTRON DE-16 (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.6.2 ? 'IMAGE ACQUISITION' 'SerialEM was used to automatically select particle images' 2 ? ? 1 SerialEM 4.0 ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? ? OTHER ? 8 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX 1.20.1_4487 ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC 4.6.2 ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC 4.6.2 ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9U5R 'double helix' 9U5R 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D G 1 1_555 D C 83 1_555 -0.128 -0.327 -1.029 -6.687 3.766 -2.031 1 R_G1:C83_R R 1 ? R 83 ? 19 1 1 D G 2 1_555 D C 82 1_555 -0.122 -0.288 -0.822 -3.381 7.099 -2.923 2 R_G2:C82_R R 2 ? R 82 ? 19 1 1 D G 3 1_555 D C 81 1_555 -0.139 -0.254 -0.766 -0.077 8.593 -2.899 3 R_G3:C81_R R 3 ? R 81 ? 19 1 1 D A 4 1_555 D U 80 1_555 0.021 -0.147 -0.286 6.964 6.882 0.467 4 R_A4:U80_R R 4 ? R 80 ? 20 1 1 D A 5 1_555 D U 79 1_555 0.041 -0.167 -0.243 3.876 7.602 -0.031 5 R_A5:U79_R R 5 ? R 79 ? 20 1 1 D A 6 1_555 D U 78 1_555 0.041 -0.178 -0.574 7.965 3.640 -1.145 6 R_A6:U78_R R 6 ? R 78 ? 20 1 1 D C 7 1_555 D G 77 1_555 0.089 -0.237 -1.191 18.009 -1.262 -3.253 7 R_C7:G77_R R 7 ? R 77 ? 19 1 1 D G 9 1_555 D U 76 1_555 -1.349 0.759 0.121 28.039 -27.307 14.881 8 R_G9:U76_R R 9 ? R 76 ? ? 1 1 D C 26 1_555 D G 15 1_555 0.111 -0.270 -0.797 5.127 5.340 -2.223 9 R_C26:G15_R R 26 ? R 15 ? 19 1 1 D A 27 1_555 D U 14 1_555 0.004 -0.186 -0.749 -6.296 3.183 -0.137 10 R_A27:U14_R R 27 ? R 14 ? 20 1 1 D U 28 1_555 D A 13 1_555 -0.035 -0.205 -0.603 -2.175 5.077 0.837 11 R_U28:A13_R R 28 ? R 13 ? 20 1 1 D U 29 1_555 D G 12 1_555 0.465 -0.694 -0.425 1.487 4.917 -7.907 12 R_U29:G12_R R 29 ? R 12 ? 27 1 1 D C 30 1_555 D G 11 1_555 0.291 -0.168 -0.863 1.598 0.604 1.337 13 R_C30:G11_R R 30 ? R 11 ? 19 1 1 D G 31 1_555 D C 10 1_555 -0.090 -0.209 0.596 -1.368 0.812 2.054 14 R_G31:C10_R R 31 ? R 10 ? 19 1 1 D A 32 1_555 D U 42 1_555 0.084 -0.113 -0.483 -4.615 6.802 -1.348 15 R_A32:U42_R R 32 ? R 42 ? 20 1 1 D C 33 1_555 D G 41 1_555 0.182 -0.175 0.142 -0.369 7.806 0.701 16 R_C33:G41_R R 33 ? R 41 ? 19 1 1 D C 34 1_555 D G 40 1_555 0.187 -0.158 0.162 2.900 9.006 1.758 17 R_C34:G40_R R 34 ? R 40 ? 19 1 1 D C 35 1_555 D G 39 1_555 0.195 -0.123 -0.143 1.617 -0.020 1.359 18 R_C35:G39_R R 35 ? R 39 ? 19 1 1 D A 45 1_555 D G 73 1_555 -2.020 0.612 -1.051 -7.892 -4.413 -20.888 19 R_A45:G73_R R 45 ? R 73 ? 8 1 1 D G 46 1_555 D C 72 1_555 -0.140 -0.205 0.531 -4.894 2.119 1.589 20 R_G46:C72_R R 46 ? R 72 ? 19 1 1 D U 47 1_555 D A 71 1_555 -1.745 0.151 0.319 -4.606 6.566 2.776 21 R_U47:A71_R R 47 ? R 71 ? 20 1 1 D A 48 1_555 D U 70 1_555 0.055 -0.066 -0.227 10.237 13.301 -2.368 22 R_A48:U70_R R 48 ? R 70 ? 20 1 1 D C 49 1_555 D G 69 1_555 0.112 -0.090 -1.151 29.846 7.276 -0.160 23 R_C49:G69_R R 49 ? R 69 ? 19 1 1 D C 51 1_555 D U 68 1_555 -2.231 -1.291 0.882 47.654 -18.252 17.944 24 R_C51:U68_R R 51 ? R 68 ? ? ? 1 D G 53 1_555 D C 65 1_555 -0.180 -0.212 -0.909 -7.968 -1.066 0.390 25 R_G53:C65_R R 53 ? R 65 ? 19 1 1 D G 54 1_555 D C 64 1_555 -0.090 -0.250 -0.974 -3.026 3.103 -3.889 26 R_G54:C64_R R 54 ? R 64 ? 19 1 1 D U 55 1_555 D A 63 1_555 0.026 -0.140 0.148 2.226 3.301 4.002 27 R_U55:A63_R R 55 ? R 63 ? 20 1 1 D A 56 1_555 D U 62 1_555 0.051 -0.083 -0.213 -2.218 -2.290 3.233 28 R_A56:U62_R R 56 ? R 62 ? 20 1 1 D C 57 1_555 D G 61 1_555 0.172 -0.232 -0.692 6.155 1.061 0.043 29 R_C57:G61_R R 57 ? R 61 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D G 1 1_555 D C 83 1_555 D G 2 1_555 D C 82 1_555 0.060 -1.416 3.277 -2.868 2.631 31.772 -3.036 -0.619 3.135 4.783 5.214 32.003 1 RR_G1G2:C82C83_RR R 1 ? R 83 ? R 2 ? R 82 ? 1 D G 2 1_555 D C 82 1_555 D G 3 1_555 D C 81 1_555 0.167 -1.642 3.240 -0.913 2.939 31.855 -3.492 -0.462 3.074 5.339 1.659 31.999 2 RR_G2G3:C81C82_RR R 2 ? R 82 ? R 3 ? R 81 ? 1 D G 3 1_555 D C 81 1_555 D A 4 1_555 D U 80 1_555 0.408 -1.935 3.469 2.756 3.990 32.688 -4.100 -0.236 3.240 7.041 -4.863 33.036 3 RR_G3A4:U80C81_RR R 3 ? R 81 ? R 4 ? R 80 ? 1 D A 4 1_555 D U 80 1_555 D A 5 1_555 D U 79 1_555 -0.525 -1.623 3.252 -1.796 6.252 35.359 -3.484 0.605 2.954 10.186 2.926 35.933 4 RR_A4A5:U79U80_RR R 4 ? R 80 ? R 5 ? R 79 ? 1 D A 5 1_555 D U 79 1_555 D A 6 1_555 D U 78 1_555 0.203 -1.561 3.086 2.614 4.884 31.342 -3.661 0.065 2.824 8.954 -4.792 31.815 5 RR_A5A6:U78U79_RR R 5 ? R 79 ? R 6 ? R 78 ? 1 D A 6 1_555 D U 78 1_555 D C 7 1_555 D G 77 1_555 0.153 -1.765 2.958 4.318 -0.780 34.850 -2.818 0.336 2.993 -1.297 -7.175 35.116 6 RR_A6C7:G77U78_RR R 6 ? R 78 ? R 7 ? R 77 ? 1 D C 7 1_555 D G 77 1_555 D G 9 1_555 D U 76 1_555 -0.494 -0.971 4.867 14.746 8.010 38.025 -2.605 2.967 4.132 11.627 -21.405 41.438 7 RR_C7G9:U76G77_RR R 7 ? R 77 ? R 9 ? R 76 ? 1 D C 26 1_555 D G 15 1_555 D A 27 1_555 D U 14 1_555 0.850 -1.879 4.083 6.847 2.575 33.777 -3.664 -0.104 4.023 4.369 -11.615 34.537 8 RR_C26A27:U14G15_RR R 26 ? R 15 ? R 27 ? R 14 ? 1 D A 27 1_555 D U 14 1_555 D U 28 1_555 D A 13 1_555 0.468 -1.786 3.192 -0.731 0.199 35.638 -2.946 -0.868 3.173 0.325 1.195 35.646 9 RR_A27U28:A13U14_RR R 27 ? R 14 ? R 28 ? R 13 ? 1 D U 28 1_555 D A 13 1_555 D U 29 1_555 D G 12 1_555 -0.138 -1.789 3.208 0.304 2.923 36.478 -3.235 0.260 3.059 4.660 -0.485 36.593 10 RR_U28U29:G12A13_RR R 28 ? R 13 ? R 29 ? R 12 ? 1 D U 29 1_555 D G 12 1_555 D C 30 1_555 D G 11 1_555 0.304 -1.855 3.400 3.491 1.685 28.890 -4.064 0.179 3.302 3.358 -6.957 29.144 11 RR_U29C30:G11G12_RR R 29 ? R 12 ? R 30 ? R 11 ? 1 D C 30 1_555 D G 11 1_555 D G 31 1_555 D C 10 1_555 0.087 -1.763 3.566 -10.139 0.223 27.454 -3.546 -2.562 3.311 0.452 20.497 29.233 12 RR_C30G31:C10G11_RR R 30 ? R 11 ? R 31 ? R 10 ? 1 D G 31 1_555 D C 10 1_555 D A 32 1_555 D U 42 1_555 -0.504 -2.244 3.965 0.841 -2.763 34.397 -3.253 1.010 4.114 -4.661 -1.420 34.515 13 RR_G31A32:U42C10_RR R 31 ? R 10 ? R 32 ? R 42 ? 1 D A 32 1_555 D U 42 1_555 D C 33 1_555 D G 41 1_555 0.275 -1.612 3.319 -3.486 4.047 34.068 -3.337 -0.996 3.070 6.855 5.905 34.472 14 RR_A32C33:G41U42_RR R 32 ? R 42 ? R 33 ? R 41 ? 1 D C 33 1_555 D G 41 1_555 D C 34 1_555 D G 40 1_555 0.052 -1.644 3.128 1.540 3.748 31.876 -3.594 0.162 2.920 6.790 -2.790 32.126 15 RR_C33C34:G40G41_RR R 33 ? R 41 ? R 34 ? R 40 ? 1 D C 34 1_555 D G 40 1_555 D C 35 1_555 D G 39 1_555 0.204 -1.725 3.115 5.244 9.870 30.340 -4.640 0.451 2.449 18.104 -9.618 32.288 16 RR_C34C35:G39G40_RR R 34 ? R 40 ? R 35 ? R 39 ? 1 D A 45 1_555 D G 73 1_555 D G 46 1_555 D C 72 1_555 0.526 -1.311 3.206 -14.468 3.350 38.244 -2.220 -2.242 2.722 4.894 21.136 40.926 17 RR_A45G46:C72G73_RR R 45 ? R 73 ? R 46 ? R 72 ? 1 D G 46 1_555 D C 72 1_555 D U 47 1_555 D A 71 1_555 -0.969 -1.962 3.628 -3.284 1.110 30.165 -3.995 1.115 3.637 2.124 6.283 30.359 18 RR_G46U47:A71C72_RR R 46 ? R 72 ? R 47 ? R 71 ? 1 D U 47 1_555 D A 71 1_555 D A 48 1_555 D U 70 1_555 -0.414 -1.210 2.826 0.424 7.090 36.820 -2.654 0.691 2.553 11.097 -0.663 37.475 19 RR_U47A48:U70A71_RR R 47 ? R 71 ? R 48 ? R 70 ? 1 D A 48 1_555 D U 70 1_555 D C 49 1_555 D G 69 1_555 0.013 -1.689 3.023 6.023 5.149 30.723 -3.929 0.955 2.666 9.521 -11.136 31.705 20 RR_A48C49:G69U70_RR R 48 ? R 70 ? R 49 ? R 69 ? 1 D C 49 1_555 D G 69 1_555 D C 51 1_555 D U 68 1_555 0.157 -0.966 5.665 21.089 9.773 31.012 -3.547 4.263 4.429 15.797 -34.089 38.583 21 RR_C49C51:U68G69_RR R 49 ? R 69 ? R 51 ? R 68 ? 1 D G 53 1_555 D C 65 1_555 D G 54 1_555 D C 64 1_555 -0.306 -1.129 3.501 0.115 0.909 31.738 -2.241 0.583 3.467 1.662 -0.210 31.751 22 RR_G53G54:C64C65_RR R 53 ? R 65 ? R 54 ? R 64 ? 1 D G 54 1_555 D C 64 1_555 D U 55 1_555 D A 63 1_555 0.667 -1.608 3.690 -1.700 1.727 27.257 -3.873 -1.876 3.536 3.655 3.597 27.363 23 RR_G54U55:A63C64_RR R 54 ? R 64 ? R 55 ? R 63 ? 1 D U 55 1_555 D A 63 1_555 D A 56 1_555 D U 62 1_555 0.568 -1.078 3.107 7.499 32.919 34.557 -3.572 -0.188 1.640 44.476 -10.132 47.949 24 RR_U55A56:U62A63_RR R 55 ? R 63 ? R 56 ? R 62 ? 1 D A 56 1_555 D U 62 1_555 D C 57 1_555 D G 61 1_555 -0.270 -1.621 3.396 1.320 1.328 23.829 -4.358 1.091 3.282 3.211 -3.191 23.901 25 RR_A56C57:G61U62_RR R 56 ? R 62 ? R 57 ? R 61 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation of China (NSFC)' China 32070170 1 'National Natural Science Foundation of China (NSFC)' China 32371272 2 'National Natural Science Foundation of China (NSFC)' China 23ZR1442500 3 # _atom_sites.entry_id 9U5R _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ #