data_9U8O # _entry.id 9U8O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.410 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9U8O pdb_00009u8o 10.2210/pdb9u8o/pdb WWPDB D_1300057758 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-04-01 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9U8O _pdbx_database_status.recvd_initial_deposition_date 2025-03-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 2 _pdbx_contact_author.email hmorita@inm.u-toyama.ac.jp _pdbx_contact_author.name_first Hiroyuki _pdbx_contact_author.name_last Morita _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9963-0587 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Nakashima, Y.' 1 ? 'Tsunoda, T.' 2 ? 'Ogasawara, Y.' 3 ? 'Dairi, T.' 4 ? 'Morita, H.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Crystal structure of cupin-domain containing protein (AzcA) from Streptomyces mobaraensis in complex with manganese and 2,5,6-triaminopyrimidin-4(3H)-one. ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nakashima, Y.' 1 ? primary 'Morita, H.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cupin type-2 domain-containing protein' 11212.313 2 ? ? ? ? 2 non-polymer syn '2,5,6-tris(azanyl)-5~{H}-pyrimidin-4-one' 141.131 1 ? ? ? ? 3 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 4 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 5 water nat water 18.015 120 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHEHIEQVGTKLVYSDDRVRVWVLELEAGEQTIVHQHPCDYVYVVTESGRAETVNHDGTSYVGDDKVGDAVYHEAGQPHL LRNIGDTHYSNIIVELLATG ; _entity_poly.pdbx_seq_one_letter_code_can ;MHEHIEQVGTKLVYSDDRVRVWVLELEAGEQTIVHQHPCDYVYVVTESGRAETVNHDGTSYVGDDKVGDAVYHEAGQPHL LRNIGDTHYSNIIVELLATG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2,5,6-tris(azanyl)-5~{H}-pyrimidin-4-one' A1L8V 3 IMIDAZOLE IMD 4 'MANGANESE (II) ION' MN 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 GLU n 1 4 HIS n 1 5 ILE n 1 6 GLU n 1 7 GLN n 1 8 VAL n 1 9 GLY n 1 10 THR n 1 11 LYS n 1 12 LEU n 1 13 VAL n 1 14 TYR n 1 15 SER n 1 16 ASP n 1 17 ASP n 1 18 ARG n 1 19 VAL n 1 20 ARG n 1 21 VAL n 1 22 TRP n 1 23 VAL n 1 24 LEU n 1 25 GLU n 1 26 LEU n 1 27 GLU n 1 28 ALA n 1 29 GLY n 1 30 GLU n 1 31 GLN n 1 32 THR n 1 33 ILE n 1 34 VAL n 1 35 HIS n 1 36 GLN n 1 37 HIS n 1 38 PRO n 1 39 CYS n 1 40 ASP n 1 41 TYR n 1 42 VAL n 1 43 TYR n 1 44 VAL n 1 45 VAL n 1 46 THR n 1 47 GLU n 1 48 SER n 1 49 GLY n 1 50 ARG n 1 51 ALA n 1 52 GLU n 1 53 THR n 1 54 VAL n 1 55 ASN n 1 56 HIS n 1 57 ASP n 1 58 GLY n 1 59 THR n 1 60 SER n 1 61 TYR n 1 62 VAL n 1 63 GLY n 1 64 ASP n 1 65 ASP n 1 66 LYS n 1 67 VAL n 1 68 GLY n 1 69 ASP n 1 70 ALA n 1 71 VAL n 1 72 TYR n 1 73 HIS n 1 74 GLU n 1 75 ALA n 1 76 GLY n 1 77 GLN n 1 78 PRO n 1 79 HIS n 1 80 LEU n 1 81 LEU n 1 82 ARG n 1 83 ASN n 1 84 ILE n 1 85 GLY n 1 86 ASP n 1 87 THR n 1 88 HIS n 1 89 TYR n 1 90 SER n 1 91 ASN n 1 92 ILE n 1 93 ILE n 1 94 VAL n 1 95 GLU n 1 96 LEU n 1 97 LEU n 1 98 ALA n 1 99 THR n 1 100 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 100 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene H7K43_04140 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces mobaraensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 35621 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli M15' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 1007065 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1L8V non-polymer . '2,5,6-tris(azanyl)-5~{H}-pyrimidin-4-one' ? 'C4 H7 N5 O' 141.131 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 HIS 2 2 ? ? ? A . n A 1 3 GLU 3 3 ? ? ? A . n A 1 4 HIS 4 4 ? ? ? A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 CYS 39 39 39 CYS CYS A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 HIS 79 79 79 HIS HIS A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 GLY 100 100 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 HIS 2 2 ? ? ? B . n B 1 3 GLU 3 3 ? ? ? B . n B 1 4 HIS 4 4 ? ? ? B . n B 1 5 ILE 5 5 ? ? ? B . n B 1 6 GLU 6 6 ? ? ? B . n B 1 7 GLN 7 7 7 GLN GLN B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 THR 10 10 10 THR THR B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 VAL 13 13 13 VAL VAL B . n B 1 14 TYR 14 14 14 TYR TYR B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 ASP 16 16 16 ASP ASP B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 ARG 18 18 18 ARG ARG B . n B 1 19 VAL 19 19 19 VAL VAL B . n B 1 20 ARG 20 20 20 ARG ARG B . n B 1 21 VAL 21 21 21 VAL VAL B . n B 1 22 TRP 22 22 22 TRP TRP B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 GLU 27 27 27 GLU GLU B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 GLY 29 29 29 GLY GLY B . n B 1 30 GLU 30 30 30 GLU GLU B . n B 1 31 GLN 31 31 31 GLN GLN B . n B 1 32 THR 32 32 32 THR THR B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 VAL 34 34 34 VAL VAL B . n B 1 35 HIS 35 35 35 HIS HIS B . n B 1 36 GLN 36 36 36 GLN GLN B . n B 1 37 HIS 37 37 37 HIS HIS B . n B 1 38 PRO 38 38 38 PRO PRO B . n B 1 39 CYS 39 39 39 CYS CYS B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 TYR 41 41 41 TYR TYR B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 TYR 43 43 43 TYR TYR B . n B 1 44 VAL 44 44 44 VAL VAL B . n B 1 45 VAL 45 45 45 VAL VAL B . n B 1 46 THR 46 46 46 THR THR B . n B 1 47 GLU 47 47 47 GLU GLU B . n B 1 48 SER 48 48 48 SER SER B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ARG 50 50 50 ARG ARG B . n B 1 51 ALA 51 51 51 ALA ALA B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 THR 53 53 53 THR THR B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 ASN 55 55 55 ASN ASN B . n B 1 56 HIS 56 56 56 HIS HIS B . n B 1 57 ASP 57 57 57 ASP ASP B . n B 1 58 GLY 58 58 58 GLY GLY B . n B 1 59 THR 59 59 59 THR THR B . n B 1 60 SER 60 60 60 SER SER B . n B 1 61 TYR 61 61 61 TYR TYR B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 GLY 63 63 63 GLY GLY B . n B 1 64 ASP 64 64 64 ASP ASP B . n B 1 65 ASP 65 65 65 ASP ASP B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 ASP 69 69 69 ASP ASP B . n B 1 70 ALA 70 70 70 ALA ALA B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 TYR 72 72 72 TYR TYR B . n B 1 73 HIS 73 73 73 HIS HIS B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 ALA 75 75 75 ALA ALA B . n B 1 76 GLY 76 76 76 GLY GLY B . n B 1 77 GLN 77 77 77 GLN GLN B . n B 1 78 PRO 78 78 78 PRO PRO B . n B 1 79 HIS 79 79 79 HIS HIS B . n B 1 80 LEU 80 80 80 LEU LEU B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 ARG 82 82 82 ARG ARG B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 GLY 85 85 85 GLY GLY B . n B 1 86 ASP 86 86 86 ASP ASP B . n B 1 87 THR 87 87 87 THR THR B . n B 1 88 HIS 88 88 88 HIS HIS B . n B 1 89 TYR 89 89 89 TYR TYR B . n B 1 90 SER 90 90 90 SER SER B . n B 1 91 ASN 91 91 91 ASN ASN B . n B 1 92 ILE 92 92 92 ILE ILE B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 VAL 94 94 94 VAL VAL B . n B 1 95 GLU 95 95 95 GLU GLU B . n B 1 96 LEU 96 96 96 LEU LEU B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ALA 98 98 98 ALA ALA B . n B 1 99 THR 99 99 99 THR THR B . n B 1 100 GLY 100 100 ? ? ? B . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 IMD ? ? IMD ? ? 'SUBJECT OF INVESTIGATION' ? 2 A1L8V ? ? A1L8V ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A1L8V 1 301 301 A1L8V TAP A . D 3 IMD 1 302 401 IMD IMD A . E 4 MN 1 303 201 MN MN A . F 4 MN 1 201 201 MN MN B . G 5 HOH 1 401 1 HOH HOH A . G 5 HOH 2 402 80 HOH HOH A . G 5 HOH 3 403 110 HOH HOH A . G 5 HOH 4 404 101 HOH HOH A . G 5 HOH 5 405 49 HOH HOH A . G 5 HOH 6 406 76 HOH HOH A . G 5 HOH 7 407 121 HOH HOH A . G 5 HOH 8 408 64 HOH HOH A . G 5 HOH 9 409 95 HOH HOH A . G 5 HOH 10 410 17 HOH HOH A . G 5 HOH 11 411 88 HOH HOH A . G 5 HOH 12 412 6 HOH HOH A . G 5 HOH 13 413 104 HOH HOH A . G 5 HOH 14 414 20 HOH HOH A . G 5 HOH 15 415 27 HOH HOH A . G 5 HOH 16 416 21 HOH HOH A . G 5 HOH 17 417 7 HOH HOH A . G 5 HOH 18 418 66 HOH HOH A . G 5 HOH 19 419 98 HOH HOH A . G 5 HOH 20 420 70 HOH HOH A . G 5 HOH 21 421 18 HOH HOH A . G 5 HOH 22 422 55 HOH HOH A . G 5 HOH 23 423 51 HOH HOH A . G 5 HOH 24 424 106 HOH HOH A . G 5 HOH 25 425 10 HOH HOH A . G 5 HOH 26 426 30 HOH HOH A . G 5 HOH 27 427 63 HOH HOH A . G 5 HOH 28 428 58 HOH HOH A . G 5 HOH 29 429 122 HOH HOH A . G 5 HOH 30 430 5 HOH HOH A . G 5 HOH 31 431 73 HOH HOH A . G 5 HOH 32 432 14 HOH HOH A . G 5 HOH 33 433 37 HOH HOH A . G 5 HOH 34 434 96 HOH HOH A . G 5 HOH 35 435 62 HOH HOH A . G 5 HOH 36 436 54 HOH HOH A . G 5 HOH 37 437 32 HOH HOH A . G 5 HOH 38 438 13 HOH HOH A . G 5 HOH 39 439 61 HOH HOH A . G 5 HOH 40 440 34 HOH HOH A . G 5 HOH 41 441 94 HOH HOH A . G 5 HOH 42 442 11 HOH HOH A . G 5 HOH 43 443 2 HOH HOH A . G 5 HOH 44 444 97 HOH HOH A . G 5 HOH 45 445 29 HOH HOH A . G 5 HOH 46 446 100 HOH HOH A . G 5 HOH 47 447 16 HOH HOH A . G 5 HOH 48 448 46 HOH HOH A . G 5 HOH 49 449 118 HOH HOH A . G 5 HOH 50 450 60 HOH HOH A . G 5 HOH 51 451 15 HOH HOH A . G 5 HOH 52 452 87 HOH HOH A . G 5 HOH 53 453 103 HOH HOH A . G 5 HOH 54 454 79 HOH HOH A . G 5 HOH 55 455 69 HOH HOH A . G 5 HOH 56 456 81 HOH HOH A . G 5 HOH 57 457 105 HOH HOH A . G 5 HOH 58 458 53 HOH HOH A . G 5 HOH 59 459 108 HOH HOH A . G 5 HOH 60 460 111 HOH HOH A . H 5 HOH 1 301 40 HOH HOH B . H 5 HOH 2 302 19 HOH HOH B . H 5 HOH 3 303 24 HOH HOH B . H 5 HOH 4 304 71 HOH HOH B . H 5 HOH 5 305 36 HOH HOH B . H 5 HOH 6 306 83 HOH HOH B . H 5 HOH 7 307 57 HOH HOH B . H 5 HOH 8 308 50 HOH HOH B . H 5 HOH 9 309 22 HOH HOH B . H 5 HOH 10 310 41 HOH HOH B . H 5 HOH 11 311 86 HOH HOH B . H 5 HOH 12 312 72 HOH HOH B . H 5 HOH 13 313 33 HOH HOH B . H 5 HOH 14 314 90 HOH HOH B . H 5 HOH 15 315 85 HOH HOH B . H 5 HOH 16 316 43 HOH HOH B . H 5 HOH 17 317 47 HOH HOH B . H 5 HOH 18 318 107 HOH HOH B . H 5 HOH 19 319 68 HOH HOH B . H 5 HOH 20 320 8 HOH HOH B . H 5 HOH 21 321 39 HOH HOH B . H 5 HOH 22 322 9 HOH HOH B . H 5 HOH 23 323 25 HOH HOH B . H 5 HOH 24 324 75 HOH HOH B . H 5 HOH 25 325 52 HOH HOH B . H 5 HOH 26 326 3 HOH HOH B . H 5 HOH 27 327 45 HOH HOH B . H 5 HOH 28 328 65 HOH HOH B . H 5 HOH 29 329 23 HOH HOH B . H 5 HOH 30 330 12 HOH HOH B . H 5 HOH 31 331 99 HOH HOH B . H 5 HOH 32 332 26 HOH HOH B . H 5 HOH 33 333 35 HOH HOH B . H 5 HOH 34 334 31 HOH HOH B . H 5 HOH 35 335 28 HOH HOH B . H 5 HOH 36 336 84 HOH HOH B . H 5 HOH 37 337 120 HOH HOH B . H 5 HOH 38 338 92 HOH HOH B . H 5 HOH 39 339 91 HOH HOH B . H 5 HOH 40 340 48 HOH HOH B . H 5 HOH 41 341 93 HOH HOH B . H 5 HOH 42 342 67 HOH HOH B . H 5 HOH 43 343 4 HOH HOH B . H 5 HOH 44 344 117 HOH HOH B . H 5 HOH 45 345 78 HOH HOH B . H 5 HOH 46 346 38 HOH HOH B . H 5 HOH 47 347 82 HOH HOH B . H 5 HOH 48 348 113 HOH HOH B . H 5 HOH 49 349 112 HOH HOH B . H 5 HOH 50 350 42 HOH HOH B . H 5 HOH 51 351 89 HOH HOH B . H 5 HOH 52 352 109 HOH HOH B . H 5 HOH 53 353 119 HOH HOH B . H 5 HOH 54 354 114 HOH HOH B . H 5 HOH 55 355 115 HOH HOH B . H 5 HOH 56 356 102 HOH HOH B . H 5 HOH 57 357 116 HOH HOH B . H 5 HOH 58 358 74 HOH HOH B . H 5 HOH 59 359 56 HOH HOH B . H 5 HOH 60 360 44 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 5 ? CG1 ? A ILE 5 CG1 2 1 Y 1 A ILE 5 ? CG2 ? A ILE 5 CG2 3 1 Y 1 A ILE 5 ? CD1 ? A ILE 5 CD1 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9U8O _cell.details ? _cell.formula_units_Z ? _cell.length_a 42.086 _cell.length_a_esd ? _cell.length_b 42.086 _cell.length_b_esd ? _cell.length_c 198.614 _cell.length_c_esd ? _cell.volume 351791.352 _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9U8O _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9U8O _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.96 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '7.3 mg/mL AzcA, 1 mM MnCl2, 200 mM calcium acetate, 100 mM imidazole/HCl (pH 8.0), 20% (w/v) PEG 1,000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 4M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-11-13 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.01200 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-1A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.01200 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-1A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate 25.08 _reflns.entry_id 9U8O _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.71 _reflns.d_resolution_low 42.09 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 36850 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 14.1 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.71 _reflns_shell.d_res_low 1.74 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1073 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 15.1 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.673 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.048 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 32.68 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9U8O _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.71 _refine.ls_d_res_low 41.17 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 36850 _refine.ls_number_reflns_R_free 3579 _refine.ls_number_reflns_R_work 33271 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.98 _refine.ls_percent_reflns_R_free 9.71 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1880 _refine.ls_R_factor_R_free 0.2255 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1840 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.1440 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1695 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.71 _refine_hist.d_res_low 41.17 _refine_hist.number_atoms_solvent 120 _refine_hist.number_atoms_total 1613 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1478 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0126 ? 1537 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.1454 ? 2101 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0893 ? 238 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0079 ? 276 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.5903 ? 210 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.71 1.73 . . 138 1274 100.00 . . . . 0.2873 . . . . . . . . . . . . . . . 0.3281 'X-RAY DIFFRACTION' 1.73 1.76 . . 144 1308 100.00 . . . . 0.2716 . . . . . . . . . . . . . . . 0.2745 'X-RAY DIFFRACTION' 1.76 1.78 . . 132 1236 100.00 . . . . 0.2507 . . . . . . . . . . . . . . . 0.2699 'X-RAY DIFFRACTION' 1.78 1.81 . . 134 1295 100.00 . . . . 0.2457 . . . . . . . . . . . . . . . 0.3013 'X-RAY DIFFRACTION' 1.81 1.84 . . 140 1297 100.00 . . . . 0.2366 . . . . . . . . . . . . . . . 0.2693 'X-RAY DIFFRACTION' 1.84 1.87 . . 135 1278 100.00 . . . . 0.2372 . . . . . . . . . . . . . . . 0.2659 'X-RAY DIFFRACTION' 1.87 1.90 . . 139 1286 100.00 . . . . 0.2280 . . . . . . . . . . . . . . . 0.2776 'X-RAY DIFFRACTION' 1.90 1.93 . . 136 1251 100.00 . . . . 0.2165 . . . . . . . . . . . . . . . 0.2695 'X-RAY DIFFRACTION' 1.93 1.97 . . 142 1295 100.00 . . . . 0.2169 . . . . . . . . . . . . . . . 0.2427 'X-RAY DIFFRACTION' 1.97 2.01 . . 139 1287 100.00 . . . . 0.2011 . . . . . . . . . . . . . . . 0.2587 'X-RAY DIFFRACTION' 2.01 2.05 . . 140 1281 100.00 . . . . 0.1965 . . . . . . . . . . . . . . . 0.2512 'X-RAY DIFFRACTION' 2.05 2.10 . . 139 1276 100.00 . . . . 0.1938 . . . . . . . . . . . . . . . 0.2403 'X-RAY DIFFRACTION' 2.10 2.15 . . 139 1251 100.00 . . . . 0.1793 . . . . . . . . . . . . . . . 0.2135 'X-RAY DIFFRACTION' 2.15 2.21 . . 137 1321 100.00 . . . . 0.1797 . . . . . . . . . . . . . . . 0.2145 'X-RAY DIFFRACTION' 2.21 2.28 . . 131 1245 100.00 . . . . 0.1614 . . . . . . . . . . . . . . . 0.2223 'X-RAY DIFFRACTION' 2.28 2.35 . . 137 1300 100.00 . . . . 0.1793 . . . . . . . . . . . . . . . 0.2138 'X-RAY DIFFRACTION' 2.35 2.44 . . 134 1276 100.00 . . . . 0.1952 . . . . . . . . . . . . . . . 0.2359 'X-RAY DIFFRACTION' 2.44 2.53 . . 138 1274 99.93 . . . . 0.1848 . . . . . . . . . . . . . . . 0.2057 'X-RAY DIFFRACTION' 2.53 2.65 . . 139 1282 100.00 . . . . 0.1814 . . . . . . . . . . . . . . . 0.2414 'X-RAY DIFFRACTION' 2.65 2.79 . . 148 1288 100.00 . . . . 0.1788 . . . . . . . . . . . . . . . 0.2228 'X-RAY DIFFRACTION' 2.79 2.96 . . 135 1261 100.00 . . . . 0.1742 . . . . . . . . . . . . . . . 0.2322 'X-RAY DIFFRACTION' 2.96 3.19 . . 137 1278 100.00 . . . . 0.1699 . . . . . . . . . . . . . . . 0.2123 'X-RAY DIFFRACTION' 3.19 3.51 . . 140 1308 99.93 . . . . 0.1571 . . . . . . . . . . . . . . . 0.2047 'X-RAY DIFFRACTION' 3.51 4.02 . . 136 1252 100.00 . . . . 0.1646 . . . . . . . . . . . . . . . 0.2140 'X-RAY DIFFRACTION' 4.02 5.06 . . 128 1292 99.93 . . . . 0.1504 . . . . . . . . . . . . . . . 0.2138 'X-RAY DIFFRACTION' 5.06 41.17 . . 142 1279 99.79 . . . . 0.2173 . . . . . . . . . . . . . . . 0.2119 # _struct.entry_id 9U8O _struct.title ;Crystal structure of cupin-domain containing protein (AzcA) forming triazine (6-amino-4-oxo-4,5-dihydro-1,3,5-triazine-2-carboxylic acid) moiety from Streptomyces mobaraensis in complex with manganese and 2,5,6-triaminopyrimidin-4(3H)-one. ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9U8O _struct_keywords.text 'cupin-domain containing protein, AzcA, 5-azacytidine biosynthesis, 2, 5, 6-triaminopyrimidin-4(3H)-one, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A7X1IDL3_9ACTN _struct_ref.pdbx_db_accession A0A7X1IDL3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQVGTKLVYSDDRVRVWVLELEAGEQTIVHQHPCDYVYVVTESGRAETVNHDGTSYVGDDKVGDAVYHEAGQPHLLRNIG DTHYSNIIVELLATG ; _struct_ref.pdbx_align_begin 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9U8O A 6 ? 100 ? A0A7X1IDL3 2 ? 96 ? 6 100 2 1 9U8O B 6 ? 100 ? A0A7X1IDL3 2 ? 96 ? 6 100 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9U8O MET A 1 ? UNP A0A7X1IDL3 ? ? 'initiating methionine' 1 1 1 9U8O HIS A 2 ? UNP A0A7X1IDL3 ? ? 'expression tag' 2 2 1 9U8O GLU A 3 ? UNP A0A7X1IDL3 ? ? 'expression tag' 3 3 1 9U8O HIS A 4 ? UNP A0A7X1IDL3 ? ? 'expression tag' 4 4 1 9U8O ILE A 5 ? UNP A0A7X1IDL3 ? ? 'expression tag' 5 5 2 9U8O MET B 1 ? UNP A0A7X1IDL3 ? ? 'initiating methionine' 1 6 2 9U8O HIS B 2 ? UNP A0A7X1IDL3 ? ? 'expression tag' 2 7 2 9U8O GLU B 3 ? UNP A0A7X1IDL3 ? ? 'expression tag' 3 8 2 9U8O HIS B 4 ? UNP A0A7X1IDL3 ? ? 'expression tag' 4 9 2 9U8O ILE B 5 ? UNP A0A7X1IDL3 ? ? 'expression tag' 5 10 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 120 ? 1 MORE -6 ? 1 'SSA (A^2)' 5170 ? 2 'ABSA (A^2)' 130 ? 2 MORE -7 ? 2 'SSA (A^2)' 5230 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,G 2 1 B,F,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 35 NE2 ? ? ? 1_555 E MN . MN ? ? A HIS 35 A MN 303 1_555 ? ? ? ? ? ? ? 2.143 ? ? metalc2 metalc ? ? A HIS 37 NE2 ? ? ? 1_555 E MN . MN ? ? A HIS 37 A MN 303 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc3 metalc ? ? A HIS 79 NE2 ? ? ? 1_555 E MN . MN ? ? A HIS 79 A MN 303 1_555 ? ? ? ? ? ? ? 2.207 ? ? metalc4 metalc ? ? C A1L8V . N07 ? ? ? 1_555 E MN . MN ? ? A A1L8V 301 A MN 303 1_555 ? ? ? ? ? ? ? 2.219 ? ? metalc5 metalc ? ? E MN . MN ? ? ? 1_555 G HOH . O ? ? A MN 303 A HOH 401 1_555 ? ? ? ? ? ? ? 2.364 ? ? metalc6 metalc ? ? E MN . MN ? ? ? 1_555 G HOH . O ? ? A MN 303 A HOH 443 1_555 ? ? ? ? ? ? ? 2.278 ? ? metalc7 metalc ? ? B HIS 35 NE2 ? ? ? 1_555 F MN . MN ? ? B HIS 35 B MN 201 1_555 ? ? ? ? ? ? ? 2.223 ? ? metalc8 metalc ? ? B HIS 37 NE2 ? ? ? 1_555 F MN . MN ? ? B HIS 37 B MN 201 1_555 ? ? ? ? ? ? ? 2.141 ? ? metalc9 metalc ? ? B HIS 79 NE2 ? ? ? 1_555 F MN . MN ? ? B HIS 79 B MN 201 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc10 metalc ? ? F MN . MN ? ? ? 1_555 H HOH . O ? ? B MN 201 B HOH 326 1_555 ? ? ? ? ? ? ? 2.460 ? ? metalc11 metalc ? ? F MN . MN ? ? ? 1_555 H HOH . O ? ? B MN 201 B HOH 343 1_555 ? ? ? ? ? ? ? 2.310 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 NE2 ? A HIS 37 ? A HIS 37 ? 1_555 102.6 ? 2 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 NE2 ? A HIS 79 ? A HIS 79 ? 1_555 94.3 ? 3 NE2 ? A HIS 37 ? A HIS 37 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 NE2 ? A HIS 79 ? A HIS 79 ? 1_555 100.5 ? 4 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 N07 ? C A1L8V . ? A A1L8V 301 ? 1_555 166.9 ? 5 NE2 ? A HIS 37 ? A HIS 37 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 N07 ? C A1L8V . ? A A1L8V 301 ? 1_555 89.5 ? 6 NE2 ? A HIS 79 ? A HIS 79 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 N07 ? C A1L8V . ? A A1L8V 301 ? 1_555 88.5 ? 7 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 O ? G HOH . ? A HOH 401 ? 1_555 92.5 ? 8 NE2 ? A HIS 37 ? A HIS 37 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 O ? G HOH . ? A HOH 401 ? 1_555 86.8 ? 9 NE2 ? A HIS 79 ? A HIS 79 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 O ? G HOH . ? A HOH 401 ? 1_555 168.6 ? 10 N07 ? C A1L8V . ? A A1L8V 301 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 O ? G HOH . ? A HOH 401 ? 1_555 82.8 ? 11 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 O ? G HOH . ? A HOH 443 ? 1_555 85.8 ? 12 NE2 ? A HIS 37 ? A HIS 37 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 O ? G HOH . ? A HOH 443 ? 1_555 165.5 ? 13 NE2 ? A HIS 79 ? A HIS 79 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 O ? G HOH . ? A HOH 443 ? 1_555 90.4 ? 14 N07 ? C A1L8V . ? A A1L8V 301 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 O ? G HOH . ? A HOH 443 ? 1_555 81.3 ? 15 O ? G HOH . ? A HOH 401 ? 1_555 MN ? E MN . ? A MN 303 ? 1_555 O ? G HOH . ? A HOH 443 ? 1_555 81.0 ? 16 NE2 ? B HIS 35 ? B HIS 35 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 NE2 ? B HIS 37 ? B HIS 37 ? 1_555 101.7 ? 17 NE2 ? B HIS 35 ? B HIS 35 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 NE2 ? B HIS 79 ? B HIS 79 ? 1_555 93.4 ? 18 NE2 ? B HIS 37 ? B HIS 37 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 NE2 ? B HIS 79 ? B HIS 79 ? 1_555 95.7 ? 19 NE2 ? B HIS 35 ? B HIS 35 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 O ? H HOH . ? B HOH 326 ? 1_555 160.4 ? 20 NE2 ? B HIS 37 ? B HIS 37 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 O ? H HOH . ? B HOH 326 ? 1_555 97.9 ? 21 NE2 ? B HIS 79 ? B HIS 79 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 O ? H HOH . ? B HOH 326 ? 1_555 84.8 ? 22 NE2 ? B HIS 35 ? B HIS 35 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 O ? H HOH . ? B HOH 343 ? 1_555 94.4 ? 23 NE2 ? B HIS 37 ? B HIS 37 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 O ? H HOH . ? B HOH 343 ? 1_555 100.3 ? 24 NE2 ? B HIS 79 ? B HIS 79 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 O ? H HOH . ? B HOH 343 ? 1_555 160.4 ? 25 O ? H HOH . ? B HOH 326 ? 1_555 MN ? F MN . ? B MN 201 ? 1_555 O ? H HOH . ? B HOH 343 ? 1_555 81.8 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 5 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 11 ? SER A 15 ? LYS A 11 SER A 15 AA1 2 VAL A 19 ? LEU A 26 ? VAL A 19 LEU A 26 AA1 3 TYR A 89 ? LEU A 96 ? TYR A 89 LEU A 96 AA1 4 TYR A 41 ? GLU A 47 ? TYR A 41 GLU A 47 AA1 5 ALA A 70 ? HIS A 73 ? ALA A 70 HIS A 73 AA2 1 SER A 60 ? ASP A 65 ? SER A 60 ASP A 65 AA2 2 GLY A 49 ? ASN A 55 ? GLY A 49 ASN A 55 AA2 3 HIS A 79 ? ASN A 83 ? HIS A 79 ASN A 83 AA3 1 LYS B 11 ? SER B 15 ? LYS B 11 SER B 15 AA3 2 VAL B 19 ? LEU B 26 ? VAL B 19 LEU B 26 AA3 3 TYR B 89 ? LEU B 96 ? TYR B 89 LEU B 96 AA3 4 TYR B 41 ? GLU B 47 ? TYR B 41 GLU B 47 AA3 5 ALA B 70 ? HIS B 73 ? ALA B 70 HIS B 73 AA4 1 SER B 60 ? ASP B 65 ? SER B 60 ASP B 65 AA4 2 GLY B 49 ? ASN B 55 ? GLY B 49 ASN B 55 AA4 3 HIS B 79 ? ASN B 83 ? HIS B 79 ASN B 83 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 14 ? N TYR A 14 O VAL A 21 ? O VAL A 21 AA1 2 3 N LEU A 26 ? N LEU A 26 O TYR A 89 ? O TYR A 89 AA1 3 4 O VAL A 94 ? O VAL A 94 N VAL A 42 ? N VAL A 42 AA1 4 5 N TYR A 41 ? N TYR A 41 O HIS A 73 ? O HIS A 73 AA2 1 2 O GLY A 63 ? O GLY A 63 N ALA A 51 ? N ALA A 51 AA2 2 3 N GLU A 52 ? N GLU A 52 O ARG A 82 ? O ARG A 82 AA3 1 2 N VAL B 13 ? N VAL B 13 O VAL B 21 ? O VAL B 21 AA3 2 3 N ARG B 20 ? N ARG B 20 O GLU B 95 ? O GLU B 95 AA3 3 4 O ILE B 92 ? O ILE B 92 N VAL B 44 ? N VAL B 44 AA3 4 5 N TYR B 41 ? N TYR B 41 O HIS B 73 ? O HIS B 73 AA4 1 2 O TYR B 61 ? O TYR B 61 N THR B 53 ? N THR B 53 AA4 2 3 N GLU B 52 ? N GLU B 52 O ARG B 82 ? O ARG B 82 # _pdbx_entry_details.entry_id 9U8O _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 345 ? ? O B HOH 360 ? ? 2.08 2 1 O B HOH 319 ? ? O B HOH 356 ? ? 2.10 3 1 O B HOH 309 ? ? O B HOH 356 ? ? 2.12 4 1 O10 A A1L8V 301 ? ? O A HOH 401 ? ? 2.13 5 1 O A HOH 426 ? ? O A HOH 439 ? ? 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS B 11 ? ? -172.87 107.06 2 1 ALA B 98 ? ? -86.54 34.89 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C06 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id A1L8V _pdbx_validate_chiral.auth_seq_id 301 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 451 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z+1/4 3 y+1/2,-x+1/2,z+3/4 4 x+1/2,-y+1/2,-z+3/4 5 -x+1/2,y+1/2,-z+1/4 6 -x,-y,z+1/2 7 y,x,-z 8 -y,-x,-z+1/2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A HIS 2 ? A HIS 2 3 1 Y 1 A GLU 3 ? A GLU 3 4 1 Y 1 A HIS 4 ? A HIS 4 5 1 Y 1 A GLY 100 ? A GLY 100 6 1 Y 1 B MET 1 ? B MET 1 7 1 Y 1 B HIS 2 ? B HIS 2 8 1 Y 1 B GLU 3 ? B GLU 3 9 1 Y 1 B HIS 4 ? B HIS 4 10 1 Y 1 B ILE 5 ? B ILE 5 11 1 Y 1 B GLU 6 ? B GLU 6 12 1 Y 1 B GLY 100 ? B GLY 100 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1L8V C02 C N N 1 A1L8V C04 C N N 2 A1L8V C06 C N S 3 A1L8V C08 C N N 4 A1L8V N01 N N N 5 A1L8V N03 N N N 6 A1L8V N05 N N N 7 A1L8V N07 N N N 8 A1L8V N09 N N N 9 A1L8V O10 O N N 10 A1L8V H1 H N N 11 A1L8V H2 H N N 12 A1L8V H3 H N N 13 A1L8V H4 H N N 14 A1L8V H5 H N N 15 A1L8V H6 H N N 16 A1L8V H7 H N N 17 ALA N N N N 18 ALA CA C N S 19 ALA C C N N 20 ALA O O N N 21 ALA CB C N N 22 ALA OXT O N N 23 ALA H H N N 24 ALA H2 H N N 25 ALA HA H N N 26 ALA HB1 H N N 27 ALA HB2 H N N 28 ALA HB3 H N N 29 ALA HXT H N N 30 ARG N N N N 31 ARG CA C N S 32 ARG C C N N 33 ARG O O N N 34 ARG CB C N N 35 ARG CG C N N 36 ARG CD C N N 37 ARG NE N N N 38 ARG CZ C N N 39 ARG NH1 N N N 40 ARG NH2 N N N 41 ARG OXT O N N 42 ARG H H N N 43 ARG H2 H N N 44 ARG HA H N N 45 ARG HB2 H N N 46 ARG HB3 H N N 47 ARG HG2 H N N 48 ARG HG3 H N N 49 ARG HD2 H N N 50 ARG HD3 H N N 51 ARG HE H N N 52 ARG HH11 H N N 53 ARG HH12 H N N 54 ARG HH21 H N N 55 ARG HH22 H N N 56 ARG HXT H N N 57 ASN N N N N 58 ASN CA C N S 59 ASN C C N N 60 ASN O O N N 61 ASN CB C N N 62 ASN CG C N N 63 ASN OD1 O N N 64 ASN ND2 N N N 65 ASN OXT O N N 66 ASN H H N N 67 ASN H2 H N N 68 ASN HA H N N 69 ASN HB2 H N N 70 ASN HB3 H N N 71 ASN HD21 H N N 72 ASN HD22 H N N 73 ASN HXT H N N 74 ASP N N N N 75 ASP CA C N S 76 ASP C C N N 77 ASP O O N N 78 ASP CB C N N 79 ASP CG C N N 80 ASP OD1 O N N 81 ASP OD2 O N N 82 ASP OXT O N N 83 ASP H H N N 84 ASP H2 H N N 85 ASP HA H N N 86 ASP HB2 H N N 87 ASP HB3 H N N 88 ASP HD2 H N N 89 ASP HXT H N N 90 CYS N N N N 91 CYS CA C N R 92 CYS C C N N 93 CYS O O N N 94 CYS CB C N N 95 CYS SG S N N 96 CYS OXT O N N 97 CYS H H N N 98 CYS H2 H N N 99 CYS HA H N N 100 CYS HB2 H N N 101 CYS HB3 H N N 102 CYS HG H N N 103 CYS HXT H N N 104 GLN N N N N 105 GLN CA C N S 106 GLN C C N N 107 GLN O O N N 108 GLN CB C N N 109 GLN CG C N N 110 GLN CD C N N 111 GLN OE1 O N N 112 GLN NE2 N N N 113 GLN OXT O N N 114 GLN H H N N 115 GLN H2 H N N 116 GLN HA H N N 117 GLN HB2 H N N 118 GLN HB3 H N N 119 GLN HG2 H N N 120 GLN HG3 H N N 121 GLN HE21 H N N 122 GLN HE22 H N N 123 GLN HXT H N N 124 GLU N N N N 125 GLU CA C N S 126 GLU C C N N 127 GLU O O N N 128 GLU CB C N N 129 GLU CG C N N 130 GLU CD C N N 131 GLU OE1 O N N 132 GLU OE2 O N N 133 GLU OXT O N N 134 GLU H H N N 135 GLU H2 H N N 136 GLU HA H N N 137 GLU HB2 H N N 138 GLU HB3 H N N 139 GLU HG2 H N N 140 GLU HG3 H N N 141 GLU HE2 H N N 142 GLU HXT H N N 143 GLY N N N N 144 GLY CA C N N 145 GLY C C N N 146 GLY O O N N 147 GLY OXT O N N 148 GLY H H N N 149 GLY H2 H N N 150 GLY HA2 H N N 151 GLY HA3 H N N 152 GLY HXT H N N 153 HIS N N N N 154 HIS CA C N S 155 HIS C C N N 156 HIS O O N N 157 HIS CB C N N 158 HIS CG C Y N 159 HIS ND1 N Y N 160 HIS CD2 C Y N 161 HIS CE1 C Y N 162 HIS NE2 N Y N 163 HIS OXT O N N 164 HIS H H N N 165 HIS H2 H N N 166 HIS HA H N N 167 HIS HB2 H N N 168 HIS HB3 H N N 169 HIS HD1 H N N 170 HIS HD2 H N N 171 HIS HE1 H N N 172 HIS HE2 H N N 173 HIS HXT H N N 174 HOH O O N N 175 HOH H1 H N N 176 HOH H2 H N N 177 ILE N N N N 178 ILE CA C N S 179 ILE C C N N 180 ILE O O N N 181 ILE CB C N S 182 ILE CG1 C N N 183 ILE CG2 C N N 184 ILE CD1 C N N 185 ILE OXT O N N 186 ILE H H N N 187 ILE H2 H N N 188 ILE HA H N N 189 ILE HB H N N 190 ILE HG12 H N N 191 ILE HG13 H N N 192 ILE HG21 H N N 193 ILE HG22 H N N 194 ILE HG23 H N N 195 ILE HD11 H N N 196 ILE HD12 H N N 197 ILE HD13 H N N 198 ILE HXT H N N 199 IMD N1 N Y N 200 IMD C2 C Y N 201 IMD N3 N Y N 202 IMD C4 C Y N 203 IMD C5 C Y N 204 IMD HN1 H N N 205 IMD H2 H N N 206 IMD HN3 H N N 207 IMD H4 H N N 208 IMD H5 H N N 209 LEU N N N N 210 LEU CA C N S 211 LEU C C N N 212 LEU O O N N 213 LEU CB C N N 214 LEU CG C N N 215 LEU CD1 C N N 216 LEU CD2 C N N 217 LEU OXT O N N 218 LEU H H N N 219 LEU H2 H N N 220 LEU HA H N N 221 LEU HB2 H N N 222 LEU HB3 H N N 223 LEU HG H N N 224 LEU HD11 H N N 225 LEU HD12 H N N 226 LEU HD13 H N N 227 LEU HD21 H N N 228 LEU HD22 H N N 229 LEU HD23 H N N 230 LEU HXT H N N 231 LYS N N N N 232 LYS CA C N S 233 LYS C C N N 234 LYS O O N N 235 LYS CB C N N 236 LYS CG C N N 237 LYS CD C N N 238 LYS CE C N N 239 LYS NZ N N N 240 LYS OXT O N N 241 LYS H H N N 242 LYS H2 H N N 243 LYS HA H N N 244 LYS HB2 H N N 245 LYS HB3 H N N 246 LYS HG2 H N N 247 LYS HG3 H N N 248 LYS HD2 H N N 249 LYS HD3 H N N 250 LYS HE2 H N N 251 LYS HE3 H N N 252 LYS HZ1 H N N 253 LYS HZ2 H N N 254 LYS HZ3 H N N 255 LYS HXT H N N 256 MET N N N N 257 MET CA C N S 258 MET C C N N 259 MET O O N N 260 MET CB C N N 261 MET CG C N N 262 MET SD S N N 263 MET CE C N N 264 MET OXT O N N 265 MET H H N N 266 MET H2 H N N 267 MET HA H N N 268 MET HB2 H N N 269 MET HB3 H N N 270 MET HG2 H N N 271 MET HG3 H N N 272 MET HE1 H N N 273 MET HE2 H N N 274 MET HE3 H N N 275 MET HXT H N N 276 MN MN MN N N 277 PRO N N N N 278 PRO CA C N S 279 PRO C C N N 280 PRO O O N N 281 PRO CB C N N 282 PRO CG C N N 283 PRO CD C N N 284 PRO OXT O N N 285 PRO H H N N 286 PRO HA H N N 287 PRO HB2 H N N 288 PRO HB3 H N N 289 PRO HG2 H N N 290 PRO HG3 H N N 291 PRO HD2 H N N 292 PRO HD3 H N N 293 PRO HXT H N N 294 SER N N N N 295 SER CA C N S 296 SER C C N N 297 SER O O N N 298 SER CB C N N 299 SER OG O N N 300 SER OXT O N N 301 SER H H N N 302 SER H2 H N N 303 SER HA H N N 304 SER HB2 H N N 305 SER HB3 H N N 306 SER HG H N N 307 SER HXT H N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TRP N N N N 326 TRP CA C N S 327 TRP C C N N 328 TRP O O N N 329 TRP CB C N N 330 TRP CG C Y N 331 TRP CD1 C Y N 332 TRP CD2 C Y N 333 TRP NE1 N Y N 334 TRP CE2 C Y N 335 TRP CE3 C Y N 336 TRP CZ2 C Y N 337 TRP CZ3 C Y N 338 TRP CH2 C Y N 339 TRP OXT O N N 340 TRP H H N N 341 TRP H2 H N N 342 TRP HA H N N 343 TRP HB2 H N N 344 TRP HB3 H N N 345 TRP HD1 H N N 346 TRP HE1 H N N 347 TRP HE3 H N N 348 TRP HZ2 H N N 349 TRP HZ3 H N N 350 TRP HH2 H N N 351 TRP HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 VAL N N N N 377 VAL CA C N S 378 VAL C C N N 379 VAL O O N N 380 VAL CB C N N 381 VAL CG1 C N N 382 VAL CG2 C N N 383 VAL OXT O N N 384 VAL H H N N 385 VAL H2 H N N 386 VAL HA H N N 387 VAL HB H N N 388 VAL HG11 H N N 389 VAL HG12 H N N 390 VAL HG13 H N N 391 VAL HG21 H N N 392 VAL HG22 H N N 393 VAL HG23 H N N 394 VAL HXT H N N 395 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L8V N05 C04 sing N N 1 A1L8V C04 N03 doub N N 2 A1L8V C04 C06 sing N N 3 A1L8V N03 C02 sing N N 4 A1L8V N07 C06 sing N N 5 A1L8V C06 C08 sing N N 6 A1L8V C02 N01 sing N N 7 A1L8V C02 N09 doub N N 8 A1L8V C08 N09 sing N N 9 A1L8V C08 O10 doub N N 10 A1L8V C06 H1 sing N N 11 A1L8V N01 H2 sing N N 12 A1L8V N01 H3 sing N N 13 A1L8V N05 H4 sing N N 14 A1L8V N05 H5 sing N N 15 A1L8V N07 H6 sing N N 16 A1L8V N07 H7 sing N N 17 ALA N CA sing N N 18 ALA N H sing N N 19 ALA N H2 sing N N 20 ALA CA C sing N N 21 ALA CA CB sing N N 22 ALA CA HA sing N N 23 ALA C O doub N N 24 ALA C OXT sing N N 25 ALA CB HB1 sing N N 26 ALA CB HB2 sing N N 27 ALA CB HB3 sing N N 28 ALA OXT HXT sing N N 29 ARG N CA sing N N 30 ARG N H sing N N 31 ARG N H2 sing N N 32 ARG CA C sing N N 33 ARG CA CB sing N N 34 ARG CA HA sing N N 35 ARG C O doub N N 36 ARG C OXT sing N N 37 ARG CB CG sing N N 38 ARG CB HB2 sing N N 39 ARG CB HB3 sing N N 40 ARG CG CD sing N N 41 ARG CG HG2 sing N N 42 ARG CG HG3 sing N N 43 ARG CD NE sing N N 44 ARG CD HD2 sing N N 45 ARG CD HD3 sing N N 46 ARG NE CZ sing N N 47 ARG NE HE sing N N 48 ARG CZ NH1 sing N N 49 ARG CZ NH2 doub N N 50 ARG NH1 HH11 sing N N 51 ARG NH1 HH12 sing N N 52 ARG NH2 HH21 sing N N 53 ARG NH2 HH22 sing N N 54 ARG OXT HXT sing N N 55 ASN N CA sing N N 56 ASN N H sing N N 57 ASN N H2 sing N N 58 ASN CA C sing N N 59 ASN CA CB sing N N 60 ASN CA HA sing N N 61 ASN C O doub N N 62 ASN C OXT sing N N 63 ASN CB CG sing N N 64 ASN CB HB2 sing N N 65 ASN CB HB3 sing N N 66 ASN CG OD1 doub N N 67 ASN CG ND2 sing N N 68 ASN ND2 HD21 sing N N 69 ASN ND2 HD22 sing N N 70 ASN OXT HXT sing N N 71 ASP N CA sing N N 72 ASP N H sing N N 73 ASP N H2 sing N N 74 ASP CA C sing N N 75 ASP CA CB sing N N 76 ASP CA HA sing N N 77 ASP C O doub N N 78 ASP C OXT sing N N 79 ASP CB CG sing N N 80 ASP CB HB2 sing N N 81 ASP CB HB3 sing N N 82 ASP CG OD1 doub N N 83 ASP CG OD2 sing N N 84 ASP OD2 HD2 sing N N 85 ASP OXT HXT sing N N 86 CYS N CA sing N N 87 CYS N H sing N N 88 CYS N H2 sing N N 89 CYS CA C sing N N 90 CYS CA CB sing N N 91 CYS CA HA sing N N 92 CYS C O doub N N 93 CYS C OXT sing N N 94 CYS CB SG sing N N 95 CYS CB HB2 sing N N 96 CYS CB HB3 sing N N 97 CYS SG HG sing N N 98 CYS OXT HXT sing N N 99 GLN N CA sing N N 100 GLN N H sing N N 101 GLN N H2 sing N N 102 GLN CA C sing N N 103 GLN CA CB sing N N 104 GLN CA HA sing N N 105 GLN C O doub N N 106 GLN C OXT sing N N 107 GLN CB CG sing N N 108 GLN CB HB2 sing N N 109 GLN CB HB3 sing N N 110 GLN CG CD sing N N 111 GLN CG HG2 sing N N 112 GLN CG HG3 sing N N 113 GLN CD OE1 doub N N 114 GLN CD NE2 sing N N 115 GLN NE2 HE21 sing N N 116 GLN NE2 HE22 sing N N 117 GLN OXT HXT sing N N 118 GLU N CA sing N N 119 GLU N H sing N N 120 GLU N H2 sing N N 121 GLU CA C sing N N 122 GLU CA CB sing N N 123 GLU CA HA sing N N 124 GLU C O doub N N 125 GLU C OXT sing N N 126 GLU CB CG sing N N 127 GLU CB HB2 sing N N 128 GLU CB HB3 sing N N 129 GLU CG CD sing N N 130 GLU CG HG2 sing N N 131 GLU CG HG3 sing N N 132 GLU CD OE1 doub N N 133 GLU CD OE2 sing N N 134 GLU OE2 HE2 sing N N 135 GLU OXT HXT sing N N 136 GLY N CA sing N N 137 GLY N H sing N N 138 GLY N H2 sing N N 139 GLY CA C sing N N 140 GLY CA HA2 sing N N 141 GLY CA HA3 sing N N 142 GLY C O doub N N 143 GLY C OXT sing N N 144 GLY OXT HXT sing N N 145 HIS N CA sing N N 146 HIS N H sing N N 147 HIS N H2 sing N N 148 HIS CA C sing N N 149 HIS CA CB sing N N 150 HIS CA HA sing N N 151 HIS C O doub N N 152 HIS C OXT sing N N 153 HIS CB CG sing N N 154 HIS CB HB2 sing N N 155 HIS CB HB3 sing N N 156 HIS CG ND1 sing Y N 157 HIS CG CD2 doub Y N 158 HIS ND1 CE1 doub Y N 159 HIS ND1 HD1 sing N N 160 HIS CD2 NE2 sing Y N 161 HIS CD2 HD2 sing N N 162 HIS CE1 NE2 sing Y N 163 HIS CE1 HE1 sing N N 164 HIS NE2 HE2 sing N N 165 HIS OXT HXT sing N N 166 HOH O H1 sing N N 167 HOH O H2 sing N N 168 ILE N CA sing N N 169 ILE N H sing N N 170 ILE N H2 sing N N 171 ILE CA C sing N N 172 ILE CA CB sing N N 173 ILE CA HA sing N N 174 ILE C O doub N N 175 ILE C OXT sing N N 176 ILE CB CG1 sing N N 177 ILE CB CG2 sing N N 178 ILE CB HB sing N N 179 ILE CG1 CD1 sing N N 180 ILE CG1 HG12 sing N N 181 ILE CG1 HG13 sing N N 182 ILE CG2 HG21 sing N N 183 ILE CG2 HG22 sing N N 184 ILE CG2 HG23 sing N N 185 ILE CD1 HD11 sing N N 186 ILE CD1 HD12 sing N N 187 ILE CD1 HD13 sing N N 188 ILE OXT HXT sing N N 189 IMD N1 C2 sing Y N 190 IMD N1 C5 sing Y N 191 IMD N1 HN1 sing N N 192 IMD C2 N3 doub Y N 193 IMD C2 H2 sing N N 194 IMD N3 C4 sing Y N 195 IMD N3 HN3 sing N N 196 IMD C4 C5 doub Y N 197 IMD C4 H4 sing N N 198 IMD C5 H5 sing N N 199 LEU N CA sing N N 200 LEU N H sing N N 201 LEU N H2 sing N N 202 LEU CA C sing N N 203 LEU CA CB sing N N 204 LEU CA HA sing N N 205 LEU C O doub N N 206 LEU C OXT sing N N 207 LEU CB CG sing N N 208 LEU CB HB2 sing N N 209 LEU CB HB3 sing N N 210 LEU CG CD1 sing N N 211 LEU CG CD2 sing N N 212 LEU CG HG sing N N 213 LEU CD1 HD11 sing N N 214 LEU CD1 HD12 sing N N 215 LEU CD1 HD13 sing N N 216 LEU CD2 HD21 sing N N 217 LEU CD2 HD22 sing N N 218 LEU CD2 HD23 sing N N 219 LEU OXT HXT sing N N 220 LYS N CA sing N N 221 LYS N H sing N N 222 LYS N H2 sing N N 223 LYS CA C sing N N 224 LYS CA CB sing N N 225 LYS CA HA sing N N 226 LYS C O doub N N 227 LYS C OXT sing N N 228 LYS CB CG sing N N 229 LYS CB HB2 sing N N 230 LYS CB HB3 sing N N 231 LYS CG CD sing N N 232 LYS CG HG2 sing N N 233 LYS CG HG3 sing N N 234 LYS CD CE sing N N 235 LYS CD HD2 sing N N 236 LYS CD HD3 sing N N 237 LYS CE NZ sing N N 238 LYS CE HE2 sing N N 239 LYS CE HE3 sing N N 240 LYS NZ HZ1 sing N N 241 LYS NZ HZ2 sing N N 242 LYS NZ HZ3 sing N N 243 LYS OXT HXT sing N N 244 MET N CA sing N N 245 MET N H sing N N 246 MET N H2 sing N N 247 MET CA C sing N N 248 MET CA CB sing N N 249 MET CA HA sing N N 250 MET C O doub N N 251 MET C OXT sing N N 252 MET CB CG sing N N 253 MET CB HB2 sing N N 254 MET CB HB3 sing N N 255 MET CG SD sing N N 256 MET CG HG2 sing N N 257 MET CG HG3 sing N N 258 MET SD CE sing N N 259 MET CE HE1 sing N N 260 MET CE HE2 sing N N 261 MET CE HE3 sing N N 262 MET OXT HXT sing N N 263 PRO N CA sing N N 264 PRO N CD sing N N 265 PRO N H sing N N 266 PRO CA C sing N N 267 PRO CA CB sing N N 268 PRO CA HA sing N N 269 PRO C O doub N N 270 PRO C OXT sing N N 271 PRO CB CG sing N N 272 PRO CB HB2 sing N N 273 PRO CB HB3 sing N N 274 PRO CG CD sing N N 275 PRO CG HG2 sing N N 276 PRO CG HG3 sing N N 277 PRO CD HD2 sing N N 278 PRO CD HD3 sing N N 279 PRO OXT HXT sing N N 280 SER N CA sing N N 281 SER N H sing N N 282 SER N H2 sing N N 283 SER CA C sing N N 284 SER CA CB sing N N 285 SER CA HA sing N N 286 SER C O doub N N 287 SER C OXT sing N N 288 SER CB OG sing N N 289 SER CB HB2 sing N N 290 SER CB HB3 sing N N 291 SER OG HG sing N N 292 SER OXT HXT sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TRP N CA sing N N 310 TRP N H sing N N 311 TRP N H2 sing N N 312 TRP CA C sing N N 313 TRP CA CB sing N N 314 TRP CA HA sing N N 315 TRP C O doub N N 316 TRP C OXT sing N N 317 TRP CB CG sing N N 318 TRP CB HB2 sing N N 319 TRP CB HB3 sing N N 320 TRP CG CD1 doub Y N 321 TRP CG CD2 sing Y N 322 TRP CD1 NE1 sing Y N 323 TRP CD1 HD1 sing N N 324 TRP CD2 CE2 doub Y N 325 TRP CD2 CE3 sing Y N 326 TRP NE1 CE2 sing Y N 327 TRP NE1 HE1 sing N N 328 TRP CE2 CZ2 sing Y N 329 TRP CE3 CZ3 doub Y N 330 TRP CE3 HE3 sing N N 331 TRP CZ2 CH2 doub Y N 332 TRP CZ2 HZ2 sing N N 333 TRP CZ3 CH2 sing Y N 334 TRP CZ3 HZ3 sing N N 335 TRP CH2 HH2 sing N N 336 TRP OXT HXT sing N N 337 TYR N CA sing N N 338 TYR N H sing N N 339 TYR N H2 sing N N 340 TYR CA C sing N N 341 TYR CA CB sing N N 342 TYR CA HA sing N N 343 TYR C O doub N N 344 TYR C OXT sing N N 345 TYR CB CG sing N N 346 TYR CB HB2 sing N N 347 TYR CB HB3 sing N N 348 TYR CG CD1 doub Y N 349 TYR CG CD2 sing Y N 350 TYR CD1 CE1 sing Y N 351 TYR CD1 HD1 sing N N 352 TYR CD2 CE2 doub Y N 353 TYR CD2 HD2 sing N N 354 TYR CE1 CZ doub Y N 355 TYR CE1 HE1 sing N N 356 TYR CE2 CZ sing Y N 357 TYR CE2 HE2 sing N N 358 TYR CZ OH sing N N 359 TYR OH HH sing N N 360 TYR OXT HXT sing N N 361 VAL N CA sing N N 362 VAL N H sing N N 363 VAL N H2 sing N N 364 VAL CA C sing N N 365 VAL CA CB sing N N 366 VAL CA HA sing N N 367 VAL C O doub N N 368 VAL C OXT sing N N 369 VAL CB CG1 sing N N 370 VAL CB CG2 sing N N 371 VAL CB HB sing N N 372 VAL CG1 HG11 sing N N 373 VAL CG1 HG12 sing N N 374 VAL CG1 HG13 sing N N 375 VAL CG2 HG21 sing N N 376 VAL CG2 HG22 sing N N 377 VAL CG2 HG23 sing N N 378 VAL OXT HXT sing N N 379 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 22H04976 1 'Japan Society for the Promotion of Science (JSPS)' Japan 18H03937 2 'Japan Society for the Promotion of Science (JSPS)' Japan 22H05130 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 9U8N _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 41 21 2' _space_group.name_Hall 'P 4abw 2nw' _space_group.IT_number 92 _space_group.crystal_system tetragonal _space_group.id 1 # _atom_sites.entry_id 9U8O _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.023761 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023761 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005035 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MN ? ? 20.23591 4.67902 ? ? 2.76514 44.01191 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ #