HEADER STRUCTURAL PROTEIN 02-APR-25 9UB9 TITLE WILD-TYPE BACILLUS MEGATERIUM PENICILLIN G ACYLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PENICILLIN G ACYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PENICILLIN G AMIDASE,PENICILLIN G AMIDOHYDROLASE; COMPND 5 EC: 3.5.1.11; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: THERE ARE 2 SUBUNITS. THE ALPHA SUBUNIT (CHAIN A) COMPND 8 CONSISTS OF AMINO ACID NUMBER 1 - 210.; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PENICILLIN G ACYLASE SUBUNIT BETA; COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: THE BETA SUBUNIT (CHAIN B) STARTS AT THE AMINO ACID COMPND 14 NUMBER 211 AND CONTINUES TO NUMBER 747. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PRIESTIA MEGATERIUM; SOURCE 3 ORGANISM_TAXID: 1404; SOURCE 4 ATCC: 14945; SOURCE 5 GENE: PAC, PGA; SOURCE 6 EXPRESSION_SYSTEM: PRIESTIA MEGATERIUM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1404; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: UN-CAT STAIN; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBA402; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: PRIESTIA MEGATERIUM; SOURCE 12 ORGANISM_TAXID: 1404; SOURCE 13 ATCC: 14945; SOURCE 14 GENE: PAC, PGA; SOURCE 15 EXPRESSION_SYSTEM: PRIESTIA MEGATERIUM; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 1404; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: UN-CAT STAIN; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PBA402 KEYWDS N-TERMINAL NUCLEOPHILE HYDROLASE, BACILLUS MEGATERIUM, PENICILLIN KEYWDS 2 ACYLASE, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.KAEWSASAN,C.ROJVIRIYA,J.YUVANIYAMA REVDAT 1 18-FEB-26 9UB9 0 JRNL AUTH C.KAEWSASAN,C.ROJVIRIYA,W.OONANANT,N.PRATHUMRAT,W.KOINUENG, JRNL AUTH 2 J.YUVANIYAMA JRNL TITL CAPTURING CATALYSIS: STRUCTURAL INSIGHTS INTO THE JRNL TITL 2 ACYL-ENZYME INTERMEDIATE OF PRIESTIA MEGATERIUM PENICILLIN G JRNL TITL 3 ACYLASE JRNL REF ACS CATALYSIS 2026 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.6C00015 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 53890 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2735 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.9400 - 5.2000 1.00 2738 126 0.1845 0.1866 REMARK 3 2 5.2000 - 4.1300 0.99 2632 146 0.1341 0.1588 REMARK 3 3 4.1300 - 3.6100 1.00 2674 135 0.1359 0.1468 REMARK 3 4 3.6100 - 3.2800 1.00 2689 141 0.1393 0.1763 REMARK 3 5 3.2800 - 3.0400 1.00 2642 143 0.1491 0.1833 REMARK 3 6 3.0400 - 2.8600 1.00 2637 153 0.1595 0.2071 REMARK 3 7 2.8600 - 2.7200 1.00 2654 142 0.1515 0.2116 REMARK 3 8 2.7200 - 2.6000 1.00 2656 130 0.1539 0.2146 REMARK 3 9 2.6000 - 2.5000 1.00 2633 137 0.1517 0.1856 REMARK 3 10 2.5000 - 2.4200 1.00 2638 138 0.1607 0.2261 REMARK 3 11 2.4200 - 2.3400 1.00 2636 143 0.1575 0.2268 REMARK 3 12 2.3400 - 2.2700 0.99 2629 150 0.1529 0.1973 REMARK 3 13 2.2700 - 2.2100 0.99 2596 137 0.1605 0.1929 REMARK 3 14 2.2100 - 2.1600 0.97 2578 136 0.1572 0.2036 REMARK 3 15 2.1600 - 2.1100 0.96 2552 119 0.1703 0.2309 REMARK 3 16 2.1100 - 2.0700 0.93 2434 141 0.1747 0.2398 REMARK 3 17 2.0700 - 2.0200 0.90 2396 143 0.1830 0.2556 REMARK 3 18 2.0200 - 1.9900 0.90 2324 140 0.1937 0.2677 REMARK 3 19 1.9900 - 1.9500 0.87 2291 127 0.1957 0.2959 REMARK 3 20 1.9500 - 1.9200 0.80 2126 108 0.2111 0.2821 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.158 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.158 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 6077 REMARK 3 ANGLE : 1.103 8174 REMARK 3 CHIRALITY : 0.067 818 REMARK 3 PLANARITY : 0.009 1056 REMARK 3 DIHEDRAL : 6.339 821 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 15.1257 0.9283 22.3453 REMARK 3 T TENSOR REMARK 3 T11: 0.1598 T22: 0.2137 REMARK 3 T33: 0.1330 T12: 0.0135 REMARK 3 T13: -0.0232 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.4474 L22: 1.2129 REMARK 3 L33: 0.6577 L12: 0.0801 REMARK 3 L13: 0.2218 L23: 0.0155 REMARK 3 S TENSOR REMARK 3 S11: -0.0276 S12: -0.0586 S13: 0.0425 REMARK 3 S21: 0.1436 S22: -0.0116 S23: -0.1346 REMARK 3 S31: 0.0034 S32: 0.0460 S33: 0.0387 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9UB9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-APR-25. REMARK 100 THE DEPOSITION ID IS D_1300058089. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0-8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55806 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.38100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1PNM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.125 M NACL, 29% W/V PEG 4000, AND REMARK 280 0.1 M HEPES (PH 7.5), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.73750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 3 REMARK 465 PRO A 197 REMARK 465 LYS A 198 REMARK 465 ARG A 199 REMARK 465 ASP A 200 REMARK 465 SER A 201 REMARK 465 SER A 202 REMARK 465 SER A 203 REMARK 465 GLN A 204 REMARK 465 SER A 205 REMARK 465 LEU A 206 REMARK 465 GLN A 207 REMARK 465 ILE A 208 REMARK 465 LEU A 209 REMARK 465 SER A 210 REMARK 465 ASN B 524 REMARK 465 LYS B 525 REMARK 465 ALA B 526 REMARK 465 ALA B 527 REMARK 465 LYS B 528 REMARK 465 ASN B 529 REMARK 465 VAL B 530 REMARK 465 SER B 531 REMARK 465 ALA B 532 REMARK 465 LEU B 533 REMARK 465 ASN B 534 REMARK 465 MET B 535 REMARK 465 SER B 536 REMARK 465 LYS B 537 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 4 CB CG CD CE NZ REMARK 480 GLU A 194 CB CG CD OE1 OE2 REMARK 480 LYS A 196 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 479 O HOH A 512 1.96 REMARK 500 O HOH B 935 O HOH B 956 1.96 REMARK 500 O HOH A 506 O HOH A 525 2.10 REMARK 500 OD1 ASP A 85 O HOH A 402 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 95 O HOH B 732 2656 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 36 CA - CB - CG ANGL. DEV. = 10.5 DEGREES REMARK 500 ASP B 404 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 40 32.47 -140.80 REMARK 500 PRO B 53 44.46 -86.79 REMARK 500 ASN B 60 -162.95 -112.19 REMARK 500 TRP B 244 48.90 -142.03 REMARK 500 ASN B 254 29.11 -145.07 REMARK 500 ASP B 502 26.11 -142.59 REMARK 500 PHE B 518 -57.74 -140.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 611 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 153 OE2 REMARK 620 2 ASN B 73 OD1 177.2 REMARK 620 3 THR B 75 O 93.8 89.0 REMARK 620 4 ASP B 76 OD1 91.3 89.7 75.9 REMARK 620 5 GLU B 256 OE1 91.7 86.2 131.6 152.0 REMARK 620 6 GLU B 256 OE2 93.4 86.9 75.6 151.3 56.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 612 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 336 OD1 REMARK 620 2 ASN B 338 OD1 81.1 REMARK 620 3 ASP B 340 OD1 80.6 87.4 REMARK 620 4 TYR B 342 O 89.0 167.2 82.9 REMARK 620 5 ASP B 344 OD1 103.9 85.9 171.3 104.4 REMARK 620 N 1 2 3 4 DBREF 9UB9 A 1 210 UNP Q60136 PAC_PRIMG 25 234 DBREF 9UB9 B 1 537 UNP Q60136 PAC_PRIMG 266 802 SEQRES 1 A 210 GLY GLU ASP LYS ASN GLU GLY VAL LYS VAL VAL ARG ASP SEQRES 2 A 210 ASN PHE GLY VAL PRO HIS LEU TYR ALA LYS ASN LYS LYS SEQRES 3 A 210 ASP LEU TYR GLU ALA TYR GLY TYR VAL MET ALA LYS ASP SEQRES 4 A 210 ARG LEU PHE GLN LEU GLU MET PHE ARG ARG GLY ASN GLU SEQRES 5 A 210 GLY THR VAL SER GLU ILE PHE GLY GLU ASP TYR LEU SER SEQRES 6 A 210 LYS ASP GLU GLN SER ARG ARG ASP GLY TYR SER ASN LYS SEQRES 7 A 210 GLU ILE LYS LYS MET ILE ASP GLY LEU ASP ARG GLN PRO SEQRES 8 A 210 LYS GLU LEU ILE ALA LYS PHE ALA GLU GLY ILE SER ARG SEQRES 9 A 210 TYR VAL ASN GLU ALA LEU LYS ASP PRO ASP ASP LYS LEU SEQRES 10 A 210 SER LYS GLU PHE HIS GLU TYR GLN PHE LEU PRO GLN LYS SEQRES 11 A 210 TRP THR SER THR ASP VAL VAL ARG VAL TYR MET VAL SER SEQRES 12 A 210 MET THR TYR PHE MET ASP ASN HIS GLN GLU LEU LYS ASN SEQRES 13 A 210 ALA GLU ILE LEU ALA LYS LEU GLU HIS GLU TYR GLY THR SEQRES 14 A 210 GLU VAL SER ARG LYS MET PHE ASP ASP LEU VAL TRP LYS SEQRES 15 A 210 ASN ASP PRO SER ALA PRO THR SER ILE VAL SER GLU GLY SEQRES 16 A 210 LYS PRO LYS ARG ASP SER SER SER GLN SER LEU GLN ILE SEQRES 17 A 210 LEU SER SEQRES 1 B 537 SER ASN ALA ALA ILE VAL GLY SER GLU LYS SER ALA THR SEQRES 2 B 537 GLY ASN ALA LEU LEU PHE SER GLY PRO GLN VAL GLY PHE SEQRES 3 B 537 VAL ALA PRO GLY PHE LEU TYR GLU VAL GLY LEU HIS ALA SEQRES 4 B 537 PRO GLY PHE ASP MET GLU GLY SER GLY PHE ILE GLY TYR SEQRES 5 B 537 PRO PHE ILE MET PHE GLY ALA ASN ASN HIS PHE ALA LEU SEQRES 6 B 537 SER ALA THR ALA GLY TYR GLY ASN VAL THR ASP ILE PHE SEQRES 7 B 537 GLU GLU LYS LEU ASN ALA LYS ASN SER SER GLN TYR LEU SEQRES 8 B 537 TYR LYS GLY LYS TRP ARG ASP MET GLU LYS ARG LYS GLU SEQRES 9 B 537 SER PHE THR VAL LYS GLY ASP ASN GLY GLU LYS LYS THR SEQRES 10 B 537 VAL GLU LYS ILE TYR TYR ARG THR VAL HIS GLY PRO VAL SEQRES 11 B 537 ILE SER ARG ASP GLU THR ASN LYS VAL ALA TYR SER LYS SEQRES 12 B 537 SER TRP SER PHE ARG GLY THR GLU ALA GLN SER MET SER SEQRES 13 B 537 ALA TYR MET LYS ALA ASN TRP ALA LYS ASN LEU LYS GLU SEQRES 14 B 537 PHE GLU ASN ALA ALA SER GLU TYR THR MET SER LEU ASN SEQRES 15 B 537 TRP TYR TYR ALA ASP LYS LYS GLY ASP ILE ALA TYR TYR SEQRES 16 B 537 HIS VAL GLY ARG TYR PRO VAL ARG ASN SER LYS ILE ASP SEQRES 17 B 537 GLU ARG ILE PRO THR PRO GLY THR GLY GLU TYR GLU TRP SEQRES 18 B 537 LYS GLY PHE ILE PRO PHE LYS GLU ASN PRO HIS VAL ILE SEQRES 19 B 537 ASN PRO LYS ASN GLY TYR VAL VAL ASN TRP ASN ASN LYS SEQRES 20 B 537 PRO SER LYS GLU TRP VAL ASN GLY GLU TYR SER PHE TYR SEQRES 21 B 537 TRP GLY GLU ASP ASN ARG VAL GLN GLN TYR ILE ASN GLY SEQRES 22 B 537 MET GLU ALA ARG GLY LYS VAL THR LEU GLU ASP ILE ASN SEQRES 23 B 537 GLU ILE ASN TYR THR ALA SER PHE ALA GLN LEU ARG ALA SEQRES 24 B 537 ASN LEU PHE LYS GLN LEU LEU ILE ASP VAL LEU ASP LYS SEQRES 25 B 537 ASN LYS SER THR ASN GLY ASN TYR ILE TYR LEU ILE GLU SEQRES 26 B 537 LYS LEU GLU GLU TRP ASN ASN LEU LYS GLU ASP GLU ASN SEQRES 27 B 537 LYS ASP GLY TYR TYR ASP ALA GLY ILE ALA ALA PHE PHE SEQRES 28 B 537 ASP GLU TRP TRP ASN ASN LEU HIS ASP LYS LEU PHE MET SEQRES 29 B 537 ASP GLU LEU GLY ASP PHE TYR GLY ILE THR LYS GLU ILE SEQRES 30 B 537 THR ASP HIS ARG TYR GLY ALA SER LEU ALA TYR LYS ILE SEQRES 31 B 537 LEU ASN LYS GLU SER THR ASN TYR LYS TRP VAL ASN VAL SEQRES 32 B 537 ASP GLN GLU LYS ILE ILE MET GLU SER THR ASN GLU VAL SEQRES 33 B 537 LEU ALA LYS LEU GLN SER GLU LYS GLY LEU LYS ALA GLU SEQRES 34 B 537 LYS TRP ARG MET PRO ILE LYS THR MET THR PHE GLY GLU SEQRES 35 B 537 LYS SER LEU ILE GLY ILE PRO HIS GLY TYR GLY SER MET SEQRES 36 B 537 THR PRO ILE ILE GLU MET ASN ARG GLY SER GLU ASN HIS SEQRES 37 B 537 TYR ILE GLU MET THR PRO THR GLY PRO SER GLY PHE ASN SEQRES 38 B 537 ILE THR PRO PRO GLY GLN ILE GLY PHE VAL LYS LYS ASP SEQRES 39 B 537 GLY THR ILE SER ASP HIS TYR ASP ASP GLN LEU VAL MET SEQRES 40 B 537 PHE ALA GLU TRP LYS PHE LYS PRO TYR LEU PHE ASN LYS SEQRES 41 B 537 LYS ASP ILE ASN LYS ALA ALA LYS ASN VAL SER ALA LEU SEQRES 42 B 537 ASN MET SER LYS HET PEG A 301 7 HET EDO A 302 4 HET EDO A 303 4 HET GOL A 304 6 HET CL A 305 1 HET PEG B 601 7 HET GOL B 602 6 HET PEG B 603 7 HET GOL B 604 6 HET GOL B 605 6 HET PEG B 606 7 HET EDO B 607 4 HET EDO B 608 4 HET EDO B 609 4 HET GOL B 610 6 HET CA B 611 1 HET CA B 612 1 HET CL B 613 1 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM CA CALCIUM ION HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 PEG 4(C4 H10 O3) FORMUL 4 EDO 5(C2 H6 O2) FORMUL 6 GOL 5(C3 H8 O3) FORMUL 7 CL 2(CL 1-) FORMUL 18 CA 2(CA 2+) FORMUL 21 HOH *440(H2 O) HELIX 1 AA1 ASN A 24 GLY A 53 1 30 HELIX 2 AA2 VAL A 55 GLY A 60 1 6 HELIX 3 AA3 TYR A 63 GLY A 74 1 12 HELIX 4 AA4 SER A 76 GLY A 86 1 11 HELIX 5 AA5 ASP A 88 ASP A 112 1 25 HELIX 6 AA6 ASP A 112 LEU A 117 1 6 HELIX 7 AA7 SER A 118 GLN A 125 1 8 HELIX 8 AA8 THR A 132 THR A 145 1 14 HELIX 9 AA9 TYR A 146 MET A 148 5 3 HELIX 10 AB1 HIS A 151 GLY A 168 1 18 HELIX 11 AB2 GLY A 168 VAL A 180 1 13 HELIX 12 AB3 SER B 8 SER B 11 5 4 HELIX 13 AB4 THR B 150 ALA B 164 1 15 HELIX 14 AB5 ASN B 166 GLU B 176 1 11 HELIX 15 AB6 PRO B 226 ASN B 230 5 5 HELIX 16 AB7 ASN B 254 TRP B 261 5 8 HELIX 17 AB8 VAL B 267 ALA B 276 1 10 HELIX 18 AB9 THR B 281 ALA B 295 1 15 HELIX 19 AC1 ARG B 298 ASN B 313 1 16 HELIX 20 AC2 GLY B 318 TRP B 330 1 13 HELIX 21 AC3 ALA B 345 GLY B 368 1 24 HELIX 22 AC4 PHE B 370 ASP B 379 1 10 HELIX 23 AC5 ALA B 384 ASN B 392 1 9 HELIX 24 AC6 ASP B 404 LYS B 424 1 21 HELIX 25 AC7 LYS B 427 ARG B 432 5 6 HELIX 26 AC8 GLN B 504 GLU B 510 1 7 HELIX 27 AC9 ASN B 519 ILE B 523 5 5 SHEET 1 AA1 9 VAL A 8 ARG A 12 0 SHEET 2 AA1 9 PRO A 18 ALA A 22 -1 O HIS A 19 N VAL A 11 SHEET 3 AA1 9 LEU B 32 ALA B 39 1 O HIS B 38 N ALA A 22 SHEET 4 AA1 9 PHE B 42 PHE B 49 -1 O MET B 44 N LEU B 37 SHEET 5 AA1 9 PHE B 57 ASN B 60 -1 O PHE B 57 N SER B 47 SHEET 6 AA1 9 PHE B 63 ALA B 69 -1 O LEU B 65 N GLY B 58 SHEET 7 AA1 9 LEU B 181 ASP B 187 -1 O ALA B 186 N ALA B 64 SHEET 8 AA1 9 ILE B 192 VAL B 197 -1 O TYR B 195 N TRP B 183 SHEET 9 AA1 9 HIS B 232 ILE B 234 -1 O VAL B 233 N TYR B 194 SHEET 1 AA2 6 TYR B 240 ASN B 243 0 SHEET 2 AA2 6 ASN B 2 VAL B 6 -1 N ILE B 5 O VAL B 241 SHEET 3 AA2 6 LEU B 17 GLY B 21 -1 O PHE B 19 N ALA B 4 SHEET 4 AA2 6 ASN B 467 THR B 473 -1 O ILE B 470 N LEU B 18 SHEET 5 AA2 6 GLY B 476 ILE B 482 -1 O SER B 478 N GLU B 471 SHEET 6 AA2 6 LYS B 514 PRO B 515 -1 O LYS B 514 N ASN B 481 SHEET 1 AA3 6 GLU B 100 LYS B 109 0 SHEET 2 AA3 6 LYS B 115 THR B 125 -1 O LYS B 116 N VAL B 108 SHEET 3 AA3 6 GLY B 128 ASP B 134 -1 O VAL B 130 N TYR B 123 SHEET 4 AA3 6 VAL B 139 TRP B 145 -1 O TYR B 141 N ILE B 131 SHEET 5 AA3 6 THR B 75 LYS B 81 -1 N GLU B 80 O ALA B 140 SHEET 6 AA3 6 THR B 213 PRO B 214 1 O THR B 213 N GLU B 79 SHEET 1 AA4 2 GLN B 89 TYR B 92 0 SHEET 2 AA4 2 LYS B 95 ASP B 98 -1 O ARG B 97 N TYR B 90 SHEET 1 AA5 2 THR B 437 MET B 438 0 SHEET 2 AA5 2 ILE B 458 ILE B 459 -1 O ILE B 458 N MET B 438 LINK OE2 GLU A 153 CA CA B 611 1555 1555 2.20 LINK OD1 ASN B 73 CA CA B 611 1555 1555 2.43 LINK O THR B 75 CA CA B 611 1555 1555 2.35 LINK OD1 ASP B 76 CA CA B 611 1555 1555 2.48 LINK OE1 GLU B 256 CA CA B 611 1555 1555 2.37 LINK OE2 GLU B 256 CA CA B 611 1555 1555 2.29 LINK OD1 ASP B 336 CA CA B 612 1555 1555 2.27 LINK OD1 ASN B 338 CA CA B 612 1555 1555 2.25 LINK OD1 ASP B 340 CA CA B 612 1555 1555 2.40 LINK O TYR B 342 CA CA B 612 1555 1555 2.22 LINK OD1 ASP B 344 CA CA B 612 1555 1555 2.27 CISPEP 1 ALA B 28 PRO B 29 0 -1.80 CISPEP 2 PRO B 484 PRO B 485 0 1.19 CRYST1 57.726 77.475 84.170 90.00 100.63 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017323 0.000000 0.003251 0.00000 SCALE2 0.000000 0.012907 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012088 0.00000 CONECT 1261 5939 CONECT 2129 5939 CONECT 2141 5939 CONECT 2151 5939 CONECT 3659 5939 CONECT 3660 5939 CONECT 4334 5940 CONECT 4351 5940 CONECT 4368 5940 CONECT 4377 5940 CONECT 4404 5940 CONECT 5860 5861 5862 CONECT 5861 5860 CONECT 5862 5860 5863 CONECT 5863 5862 5864 CONECT 5864 5863 5865 CONECT 5865 5864 5866 CONECT 5866 5865 CONECT 5867 5868 5869 CONECT 5868 5867 CONECT 5869 5867 5870 CONECT 5870 5869 CONECT 5871 5872 5873 CONECT 5872 5871 CONECT 5873 5871 5874 CONECT 5874 5873 CONECT 5875 5876 5877 CONECT 5876 5875 CONECT 5877 5875 5878 5879 CONECT 5878 5877 CONECT 5879 5877 5880 CONECT 5880 5879 CONECT 5882 5883 5884 CONECT 5883 5882 CONECT 5884 5882 5885 CONECT 5885 5884 5886 CONECT 5886 5885 5887 CONECT 5887 5886 5888 CONECT 5888 5887 CONECT 5889 5890 5891 CONECT 5890 5889 CONECT 5891 5889 5892 5893 CONECT 5892 5891 CONECT 5893 5891 5894 CONECT 5894 5893 CONECT 5895 5896 5897 CONECT 5896 5895 CONECT 5897 5895 5898 CONECT 5898 5897 5899 CONECT 5899 5898 5900 CONECT 5900 5899 5901 CONECT 5901 5900 CONECT 5902 5903 5904 CONECT 5903 5902 CONECT 5904 5902 5905 5906 CONECT 5905 5904 CONECT 5906 5904 5907 CONECT 5907 5906 CONECT 5908 5909 5910 CONECT 5909 5908 CONECT 5910 5908 5911 5912 CONECT 5911 5910 CONECT 5912 5910 5913 CONECT 5913 5912 CONECT 5914 5915 5916 CONECT 5915 5914 CONECT 5916 5914 5917 CONECT 5917 5916 5918 CONECT 5918 5917 5919 CONECT 5919 5918 5920 CONECT 5920 5919 CONECT 5921 5922 5923 CONECT 5922 5921 CONECT 5923 5921 5924 CONECT 5924 5923 CONECT 5925 5926 5927 CONECT 5926 5925 CONECT 5927 5925 5928 CONECT 5928 5927 CONECT 5929 5930 5931 CONECT 5930 5929 CONECT 5931 5929 5932 CONECT 5932 5931 CONECT 5933 5934 5935 CONECT 5934 5933 CONECT 5935 5933 5936 5937 CONECT 5936 5935 CONECT 5937 5935 5938 CONECT 5938 5937 CONECT 5939 1261 2129 2141 2151 CONECT 5939 3659 3660 CONECT 5940 4334 4351 4368 4377 CONECT 5940 4404 MASTER 368 0 18 27 25 0 0 6 6351 2 93 59 END