HEADER IMMUNE SYSTEM 11-APR-25 9UGE TITLE CRYSTAL STRUCTURE OF THE COMPLEX OF CAMEL PEPTIDOGLYCAN RECOGNITION TITLE 2 PROTEIN, PGRP-S WITH MALIC ACID AND OXALIC ACID AT 2.3 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDOGLYCAN RECOGNITION PROTEIN 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PEPTIDOGLYCAN RECOGNITION PROTEIN SHORT,PGRP-S SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMELUS DROMEDARIUS; SOURCE 3 ORGANISM_COMMON: ARABIAN CAMEL; SOURCE 4 ORGANISM_TAXID: 9838 KEYWDS PGRP-S, INNATE IMMUNE PROTEIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.BARIK,N.AHMAD,A.MAURYA,S.YAMINI,P.SHARMA,S.P.YADAV,M.SINHA,P.KAUR, AUTHOR 2 S.SHARMA,T.P.SINGH REVDAT 1 14-MAY-25 9UGE 0 SPRSDE 14-MAY-25 9UGE 4Q9E JRNL AUTH D.BARIK,N.AHMAD,A.MAURYA,S.YAMINI,P.SHARMA,S.P.YADAV, JRNL AUTH 2 M.SINHA,P.KAUR,S.SHARMA,T.P.SINGH JRNL TITL CRYSTAL STRUCTURE OF THE COMPLEX OF CAMEL PEPTIDOGLYCAN JRNL TITL 2 RECOGNITION PROTEIN, PGRP-S WITH MALIC ACID AND OXALIC ACID JRNL TITL 3 AT 2.3 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 29076 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.407 REMARK 3 FREE R VALUE TEST SET COUNT : 700 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1983 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.4090 REMARK 3 BIN FREE R VALUE SET COUNT : 56 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5348 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 371 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.99700 REMARK 3 B22 (A**2) : -6.24000 REMARK 3 B33 (A**2) : -1.75700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.534 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.308 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.374 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.219 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5526 ; 0.004 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 5023 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7538 ; 1.235 ; 1.804 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11492 ; 0.448 ; 1.756 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 680 ; 7.574 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 66 ; 5.118 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 816 ;13.842 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 777 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6912 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1408 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1400 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 105 ; 0.210 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2726 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 317 ; 0.200 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2732 ; 3.467 ; 5.826 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2732 ; 3.466 ; 5.826 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3408 ; 5.718 ;10.449 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3409 ; 5.718 ;10.449 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2794 ; 3.596 ; 6.242 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2783 ; 3.594 ; 6.239 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4130 ; 6.004 ;11.344 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4119 ; 6.002 ;11.340 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9UGE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-APR-25. REMARK 100 THE DEPOSITION ID IS D_1300056814. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29076 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.305 REMARK 200 RESOLUTION RANGE LOW (A) : 40.704 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 200 DATA REDUNDANCY : 1.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07400 REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.66800 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% GLYCEROL, 6% PEG3350, PH 7.8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.15400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.81150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 81.34150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.15400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.81150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 81.34150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.15400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.81150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 81.34150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.15400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.81150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.34150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 227 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 322 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 352 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP D 78 OH TYR D 82 2.15 REMARK 500 OD2 ASP A 78 OH TYR A 82 2.15 REMARK 500 O HOH B 251 O HOH B 271 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 3 -168.81 -72.23 REMARK 500 HIS A 93 -20.34 -157.88 REMARK 500 TYR A 111 44.61 -102.79 REMARK 500 ASN A 140 38.65 -97.22 REMARK 500 SER B 8 58.82 31.21 REMARK 500 ARG B 23 -40.02 -130.10 REMARK 500 VAL B 69 150.50 -48.79 REMARK 500 HIS B 93 -20.85 -151.68 REMARK 500 ASN B 140 43.57 -96.92 REMARK 500 PRO C 3 106.62 -57.92 REMARK 500 ALA C 5 137.37 -172.52 REMARK 500 CYS C 6 78.61 -174.10 REMARK 500 HIS C 93 -26.66 -149.01 REMARK 500 ASN C 140 45.47 -103.39 REMARK 500 SER C 154 130.32 -33.35 REMARK 500 PRO D 4 -108.45 -78.11 REMARK 500 ALA D 5 71.03 64.43 REMARK 500 HIS D 93 -12.72 -148.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG D 119 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 9UGE A 1 171 UNP Q9GK12 PGRP1_CAMDR 23 193 DBREF 9UGE B 1 171 UNP Q9GK12 PGRP1_CAMDR 23 193 DBREF 9UGE C 1 171 UNP Q9GK12 PGRP1_CAMDR 23 193 DBREF 9UGE D 1 171 UNP Q9GK12 PGRP1_CAMDR 23 193 SEQRES 1 A 171 GLU ASP PRO PRO ALA CYS GLY SER ILE VAL PRO ARG ARG SEQRES 2 A 171 GLU TRP ARG ALA LEU ALA SER GLU CYS ARG GLU ARG LEU SEQRES 3 A 171 THR ARG PRO VAL ARG TYR VAL VAL VAL SER HIS THR ALA SEQRES 4 A 171 GLY SER HIS CYS ASP THR PRO ALA SER CYS ALA GLN GLN SEQRES 5 A 171 ALA GLN ASN VAL GLN SER TYR HIS VAL ARG ASN LEU GLY SEQRES 6 A 171 TRP CYS ASP VAL GLY TYR ASN PHE LEU ILE GLY GLU ASP SEQRES 7 A 171 GLY LEU VAL TYR GLU GLY ARG GLY TRP ASN ILE LYS GLY SEQRES 8 A 171 ALA HIS ALA GLY PRO THR TRP ASN PRO ILE SER ILE GLY SEQRES 9 A 171 ILE SER PHE MET GLY ASN TYR MET ASN ARG VAL PRO PRO SEQRES 10 A 171 PRO ARG ALA LEU ARG ALA ALA GLN ASN LEU LEU ALA CYS SEQRES 11 A 171 GLY VAL ALA LEU GLY ALA LEU ARG SER ASN TYR GLU VAL SEQRES 12 A 171 LYS GLY HIS ARG ASP VAL GLN PRO THR LEU SER PRO GLY SEQRES 13 A 171 ASP ARG LEU TYR GLU ILE ILE GLN THR TRP SER HIS TYR SEQRES 14 A 171 ARG ALA SEQRES 1 B 171 GLU ASP PRO PRO ALA CYS GLY SER ILE VAL PRO ARG ARG SEQRES 2 B 171 GLU TRP ARG ALA LEU ALA SER GLU CYS ARG GLU ARG LEU SEQRES 3 B 171 THR ARG PRO VAL ARG TYR VAL VAL VAL SER HIS THR ALA SEQRES 4 B 171 GLY SER HIS CYS ASP THR PRO ALA SER CYS ALA GLN GLN SEQRES 5 B 171 ALA GLN ASN VAL GLN SER TYR HIS VAL ARG ASN LEU GLY SEQRES 6 B 171 TRP CYS ASP VAL GLY TYR ASN PHE LEU ILE GLY GLU ASP SEQRES 7 B 171 GLY LEU VAL TYR GLU GLY ARG GLY TRP ASN ILE LYS GLY SEQRES 8 B 171 ALA HIS ALA GLY PRO THR TRP ASN PRO ILE SER ILE GLY SEQRES 9 B 171 ILE SER PHE MET GLY ASN TYR MET ASN ARG VAL PRO PRO SEQRES 10 B 171 PRO ARG ALA LEU ARG ALA ALA GLN ASN LEU LEU ALA CYS SEQRES 11 B 171 GLY VAL ALA LEU GLY ALA LEU ARG SER ASN TYR GLU VAL SEQRES 12 B 171 LYS GLY HIS ARG ASP VAL GLN PRO THR LEU SER PRO GLY SEQRES 13 B 171 ASP ARG LEU TYR GLU ILE ILE GLN THR TRP SER HIS TYR SEQRES 14 B 171 ARG ALA SEQRES 1 C 171 GLU ASP PRO PRO ALA CYS GLY SER ILE VAL PRO ARG ARG SEQRES 2 C 171 GLU TRP ARG ALA LEU ALA SER GLU CYS ARG GLU ARG LEU SEQRES 3 C 171 THR ARG PRO VAL ARG TYR VAL VAL VAL SER HIS THR ALA SEQRES 4 C 171 GLY SER HIS CYS ASP THR PRO ALA SER CYS ALA GLN GLN SEQRES 5 C 171 ALA GLN ASN VAL GLN SER TYR HIS VAL ARG ASN LEU GLY SEQRES 6 C 171 TRP CYS ASP VAL GLY TYR ASN PHE LEU ILE GLY GLU ASP SEQRES 7 C 171 GLY LEU VAL TYR GLU GLY ARG GLY TRP ASN ILE LYS GLY SEQRES 8 C 171 ALA HIS ALA GLY PRO THR TRP ASN PRO ILE SER ILE GLY SEQRES 9 C 171 ILE SER PHE MET GLY ASN TYR MET ASN ARG VAL PRO PRO SEQRES 10 C 171 PRO ARG ALA LEU ARG ALA ALA GLN ASN LEU LEU ALA CYS SEQRES 11 C 171 GLY VAL ALA LEU GLY ALA LEU ARG SER ASN TYR GLU VAL SEQRES 12 C 171 LYS GLY HIS ARG ASP VAL GLN PRO THR LEU SER PRO GLY SEQRES 13 C 171 ASP ARG LEU TYR GLU ILE ILE GLN THR TRP SER HIS TYR SEQRES 14 C 171 ARG ALA SEQRES 1 D 171 GLU ASP PRO PRO ALA CYS GLY SER ILE VAL PRO ARG ARG SEQRES 2 D 171 GLU TRP ARG ALA LEU ALA SER GLU CYS ARG GLU ARG LEU SEQRES 3 D 171 THR ARG PRO VAL ARG TYR VAL VAL VAL SER HIS THR ALA SEQRES 4 D 171 GLY SER HIS CYS ASP THR PRO ALA SER CYS ALA GLN GLN SEQRES 5 D 171 ALA GLN ASN VAL GLN SER TYR HIS VAL ARG ASN LEU GLY SEQRES 6 D 171 TRP CYS ASP VAL GLY TYR ASN PHE LEU ILE GLY GLU ASP SEQRES 7 D 171 GLY LEU VAL TYR GLU GLY ARG GLY TRP ASN ILE LYS GLY SEQRES 8 D 171 ALA HIS ALA GLY PRO THR TRP ASN PRO ILE SER ILE GLY SEQRES 9 D 171 ILE SER PHE MET GLY ASN TYR MET ASN ARG VAL PRO PRO SEQRES 10 D 171 PRO ARG ALA LEU ARG ALA ALA GLN ASN LEU LEU ALA CYS SEQRES 11 D 171 GLY VAL ALA LEU GLY ALA LEU ARG SER ASN TYR GLU VAL SEQRES 12 D 171 LYS GLY HIS ARG ASP VAL GLN PRO THR LEU SER PRO GLY SEQRES 13 D 171 ASP ARG LEU TYR GLU ILE ILE GLN THR TRP SER HIS TYR SEQRES 14 D 171 ARG ALA HET MLT D 201 9 HET OXD D 202 6 HET OXD D 203 6 HETNAM MLT D-MALATE HETNAM OXD OXALIC ACID HETSYN MLT (2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID FORMUL 5 MLT C4 H6 O5 FORMUL 6 OXD 2(C2 H2 O4) FORMUL 8 HOH *371(H2 O) HELIX 1 AA1 THR A 45 ASN A 63 1 19 HELIX 2 AA2 ALA A 94 ASN A 99 1 6 HELIX 3 AA3 PRO A 117 LEU A 134 1 18 HELIX 4 AA4 ARG A 147 VAL A 149 5 3 HELIX 5 AA5 GLY A 156 GLN A 164 1 9 HELIX 6 AA6 ALA B 5 ILE B 9 5 5 HELIX 7 AA7 PRO B 11 ARG B 16 5 6 HELIX 8 AA8 THR B 45 ASN B 63 1 19 HELIX 9 AA9 ALA B 94 ASN B 99 1 6 HELIX 10 AB1 PRO B 117 LEU B 134 1 18 HELIX 11 AB2 HIS B 146 GLN B 150 1 5 HELIX 12 AB3 GLY B 156 THR B 165 1 10 HELIX 13 AB4 PRO C 11 ARG C 16 1 6 HELIX 14 AB5 THR C 45 ASN C 63 1 19 HELIX 15 AB6 TRP C 98 PRO C 100 5 3 HELIX 16 AB7 PRO C 117 LEU C 134 1 18 HELIX 17 AB8 GLY C 156 GLN C 164 1 9 HELIX 18 AB9 PRO D 11 ARG D 16 1 6 HELIX 19 AC1 THR D 45 ASN D 63 1 19 HELIX 20 AC2 TRP D 98 PRO D 100 5 3 HELIX 21 AC3 PRO D 117 LEU D 134 1 18 HELIX 22 AC4 ARG D 147 VAL D 149 5 3 HELIX 23 AC5 GLY D 156 GLN D 164 1 9 SHEET 1 AA1 6 ILE A 9 VAL A 10 0 SHEET 2 AA1 6 VAL A 81 GLU A 83 1 O VAL A 81 N VAL A 10 SHEET 3 AA1 6 PHE A 73 ILE A 75 -1 N LEU A 74 O TYR A 82 SHEET 4 AA1 6 SER A 102 PHE A 107 1 O SER A 106 N ILE A 75 SHEET 5 AA1 6 VAL A 30 HIS A 37 1 N VAL A 34 O ILE A 103 SHEET 6 AA1 6 LEU A 137 GLY A 145 1 O LYS A 144 N VAL A 33 SHEET 1 AA2 5 VAL B 81 GLU B 83 0 SHEET 2 AA2 5 PHE B 73 ILE B 75 -1 N LEU B 74 O TYR B 82 SHEET 3 AA2 5 SER B 102 PHE B 107 1 O SER B 106 N ILE B 75 SHEET 4 AA2 5 VAL B 30 HIS B 37 1 N VAL B 34 O ILE B 103 SHEET 5 AA2 5 LEU B 137 GLY B 145 1 O GLU B 142 N ARG B 31 SHEET 1 AA3 6 ILE C 9 VAL C 10 0 SHEET 2 AA3 6 VAL C 81 GLU C 83 1 O VAL C 81 N VAL C 10 SHEET 3 AA3 6 PHE C 73 ILE C 75 -1 N LEU C 74 O TYR C 82 SHEET 4 AA3 6 SER C 102 PHE C 107 1 O SER C 106 N ILE C 75 SHEET 5 AA3 6 VAL C 30 HIS C 37 1 N VAL C 34 O ILE C 103 SHEET 6 AA3 6 LEU C 137 GLY C 145 1 O ARG C 138 N VAL C 30 SHEET 1 AA4 6 ILE D 9 VAL D 10 0 SHEET 2 AA4 6 VAL D 81 GLU D 83 1 O VAL D 81 N VAL D 10 SHEET 3 AA4 6 PHE D 73 ILE D 75 -1 N LEU D 74 O TYR D 82 SHEET 4 AA4 6 SER D 102 PHE D 107 1 O SER D 106 N ILE D 75 SHEET 5 AA4 6 VAL D 30 HIS D 37 1 N SER D 36 O ILE D 105 SHEET 6 AA4 6 LEU D 137 GLY D 145 1 O ARG D 138 N VAL D 30 SSBOND 1 CYS A 6 CYS A 130 1555 1555 2.06 SSBOND 2 CYS A 22 CYS A 67 1555 1555 2.05 SSBOND 3 CYS A 43 CYS A 49 1555 1555 2.07 SSBOND 4 CYS B 6 CYS B 130 1555 1555 2.04 SSBOND 5 CYS B 22 CYS B 67 1555 1555 2.06 SSBOND 6 CYS B 43 CYS B 49 1555 1555 2.09 SSBOND 7 CYS C 6 CYS C 130 1555 1555 2.05 SSBOND 8 CYS C 22 CYS C 67 1555 1555 2.06 SSBOND 9 CYS C 43 CYS C 49 1555 1555 2.07 SSBOND 10 CYS D 6 CYS D 130 1555 1555 2.07 SSBOND 11 CYS D 22 CYS D 67 1555 1555 2.05 SSBOND 12 CYS D 43 CYS D 49 1555 1555 2.06 CISPEP 1 ARG A 28 PRO A 29 0 -7.59 CISPEP 2 SER A 154 PRO A 155 0 12.00 CISPEP 3 ARG B 28 PRO B 29 0 -23.75 CISPEP 4 SER B 154 PRO B 155 0 15.38 CISPEP 5 ARG C 28 PRO C 29 0 5.42 CISPEP 6 SER C 154 PRO C 155 0 12.99 CISPEP 7 ARG D 28 PRO D 29 0 -3.99 CISPEP 8 SER D 154 PRO D 155 0 5.74 CRYST1 88.308 101.623 162.683 90.00 90.00 90.00 I 2 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011324 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006147 0.00000 CONECT 42 1007 CONECT 169 524 CONECT 338 377 CONECT 377 338 CONECT 524 169 CONECT 1007 42 CONECT 1380 2345 CONECT 1507 1862 CONECT 1676 1715 CONECT 1715 1676 CONECT 1862 1507 CONECT 2345 1380 CONECT 2718 3683 CONECT 2845 3200 CONECT 3014 3053 CONECT 3053 3014 CONECT 3200 2845 CONECT 3683 2718 CONECT 4056 5021 CONECT 4183 4538 CONECT 4352 4391 CONECT 4391 4352 CONECT 4538 4183 CONECT 5021 4056 CONECT 5353 5354 5355 5356 CONECT 5354 5353 CONECT 5355 5353 CONECT 5356 5353 5357 5358 CONECT 5357 5356 CONECT 5358 5356 5359 CONECT 5359 5358 5360 5361 CONECT 5360 5359 CONECT 5361 5359 CONECT 5362 5363 5364 5366 CONECT 5363 5362 5365 5367 CONECT 5364 5362 CONECT 5365 5363 CONECT 5366 5362 CONECT 5367 5363 CONECT 5368 5369 5370 5372 CONECT 5369 5368 5371 5373 CONECT 5370 5368 CONECT 5371 5369 CONECT 5372 5368 CONECT 5373 5369 MASTER 330 0 3 23 23 0 0 6 5740 4 45 56 END