data_9ULZ # _entry.id 9ULZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.408 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9ULZ pdb_00009ulz 10.2210/pdb9ulz/pdb WWPDB D_1300058710 ? ? EMDB EMD-64268 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-01-14 ? 2 'EM metadata' 1 0 2026-01-14 ? 3 FSC 1 0 2026-01-14 ? 4 'Half map' 1 0 2026-01-14 1 5 'Half map' 1 0 2026-01-14 2 6 Image 1 0 2026-01-14 ? 7 'Primary map' 1 0 2026-01-14 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9ULZ _pdbx_database_status.recvd_initial_deposition_date 2025-04-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of hIAPP fibrils extracted from a donor with T2D and pancreatic cancer' _pdbx_database_related.db_id EMD-64268 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email caoqin@sjtu.edu.cn _pdbx_contact_author.name_first Qin _pdbx_contact_author.name_last Cao _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4207-2697 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cao, Q.' 1 0000-0003-4207-2697 'Liu, W.' 2 0009-0007-8014-159X 'Han, J.' 3 0009-0007-4067-1908 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Cell _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1097-4172 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of pancreatic hIAPP fibrils derived from patients with type 2 diabetes.' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.cell.2025.12.001 _citation.pdbx_database_id_PubMed 41483806 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, W.' 1 ? primary 'Han, J.' 2 ? primary 'Gong, W.' 3 ? primary 'Zhang, F.' 4 ? primary 'Cao, Q.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Islet amyloid polypeptide' _entity.formula_weight 3909.304 _entity.pdbx_number_of_molecules 12 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'IAPP,Amylin,Diabetes-associated peptide,DAP,Insulinoma amyloid peptide' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code KCNTATCATQRLANFLVHSSNNFGAILSSTNVGSNTY _entity_poly.pdbx_seq_one_letter_code_can KCNTATCATQRLANFLVHSSNNFGAILSSTNVGSNTY _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H,I,J,K,L _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 CYS n 1 3 ASN n 1 4 THR n 1 5 ALA n 1 6 THR n 1 7 CYS n 1 8 ALA n 1 9 THR n 1 10 GLN n 1 11 ARG n 1 12 LEU n 1 13 ALA n 1 14 ASN n 1 15 PHE n 1 16 LEU n 1 17 VAL n 1 18 HIS n 1 19 SER n 1 20 SER n 1 21 ASN n 1 22 ASN n 1 23 PHE n 1 24 GLY n 1 25 ALA n 1 26 ILE n 1 27 LEU n 1 28 SER n 1 29 SER n 1 30 THR n 1 31 ASN n 1 32 VAL n 1 33 GLY n 1 34 SER n 1 35 ASN n 1 36 THR n 1 37 TYR n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 37 _entity_src_nat.common_name human _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 ? ? ? A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 TYR 37 37 37 TYR TYR A . n B 1 1 LYS 1 1 ? ? ? B . n B 1 2 CYS 2 2 2 CYS CYS B . n B 1 3 ASN 3 3 3 ASN ASN B . n B 1 4 THR 4 4 4 THR THR B . n B 1 5 ALA 5 5 5 ALA ALA B . n B 1 6 THR 6 6 6 THR THR B . n B 1 7 CYS 7 7 7 CYS CYS B . n B 1 8 ALA 8 8 8 ALA ALA B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 GLN 10 10 10 GLN GLN B . n B 1 11 ARG 11 11 11 ARG ARG B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 ALA 13 13 13 ALA ALA B . n B 1 14 ASN 14 14 14 ASN ASN B . n B 1 15 PHE 15 15 15 PHE PHE B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 HIS 18 18 18 HIS HIS B . n B 1 19 SER 19 19 19 SER SER B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 ASN 21 21 21 ASN ASN B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 PHE 23 23 23 PHE PHE B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 ILE 26 26 26 ILE ILE B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 ASN 31 31 31 ASN ASN B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 SER 34 34 34 SER SER B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 THR 36 36 36 THR THR B . n B 1 37 TYR 37 37 37 TYR TYR B . n C 1 1 LYS 1 1 ? ? ? C . n C 1 2 CYS 2 2 2 CYS CYS C . n C 1 3 ASN 3 3 3 ASN ASN C . n C 1 4 THR 4 4 4 THR THR C . n C 1 5 ALA 5 5 5 ALA ALA C . n C 1 6 THR 6 6 6 THR THR C . n C 1 7 CYS 7 7 7 CYS CYS C . n C 1 8 ALA 8 8 8 ALA ALA C . n C 1 9 THR 9 9 9 THR THR C . n C 1 10 GLN 10 10 10 GLN GLN C . n C 1 11 ARG 11 11 11 ARG ARG C . n C 1 12 LEU 12 12 12 LEU LEU C . n C 1 13 ALA 13 13 13 ALA ALA C . n C 1 14 ASN 14 14 14 ASN ASN C . n C 1 15 PHE 15 15 15 PHE PHE C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 VAL 17 17 17 VAL VAL C . n C 1 18 HIS 18 18 18 HIS HIS C . n C 1 19 SER 19 19 19 SER SER C . n C 1 20 SER 20 20 20 SER SER C . n C 1 21 ASN 21 21 21 ASN ASN C . n C 1 22 ASN 22 22 22 ASN ASN C . n C 1 23 PHE 23 23 23 PHE PHE C . n C 1 24 GLY 24 24 24 GLY GLY C . n C 1 25 ALA 25 25 25 ALA ALA C . n C 1 26 ILE 26 26 26 ILE ILE C . n C 1 27 LEU 27 27 27 LEU LEU C . n C 1 28 SER 28 28 28 SER SER C . n C 1 29 SER 29 29 29 SER SER C . n C 1 30 THR 30 30 30 THR THR C . n C 1 31 ASN 31 31 31 ASN ASN C . n C 1 32 VAL 32 32 32 VAL VAL C . n C 1 33 GLY 33 33 33 GLY GLY C . n C 1 34 SER 34 34 34 SER SER C . n C 1 35 ASN 35 35 35 ASN ASN C . n C 1 36 THR 36 36 36 THR THR C . n C 1 37 TYR 37 37 37 TYR TYR C . n D 1 1 LYS 1 1 ? ? ? D . n D 1 2 CYS 2 2 2 CYS CYS D . n D 1 3 ASN 3 3 3 ASN ASN D . n D 1 4 THR 4 4 4 THR THR D . n D 1 5 ALA 5 5 5 ALA ALA D . n D 1 6 THR 6 6 6 THR THR D . n D 1 7 CYS 7 7 7 CYS CYS D . n D 1 8 ALA 8 8 8 ALA ALA D . n D 1 9 THR 9 9 9 THR THR D . n D 1 10 GLN 10 10 10 GLN GLN D . n D 1 11 ARG 11 11 11 ARG ARG D . n D 1 12 LEU 12 12 12 LEU LEU D . n D 1 13 ALA 13 13 13 ALA ALA D . n D 1 14 ASN 14 14 14 ASN ASN D . n D 1 15 PHE 15 15 15 PHE PHE D . n D 1 16 LEU 16 16 16 LEU LEU D . n D 1 17 VAL 17 17 17 VAL VAL D . n D 1 18 HIS 18 18 18 HIS HIS D . n D 1 19 SER 19 19 19 SER SER D . n D 1 20 SER 20 20 20 SER SER D . n D 1 21 ASN 21 21 21 ASN ASN D . n D 1 22 ASN 22 22 22 ASN ASN D . n D 1 23 PHE 23 23 23 PHE PHE D . n D 1 24 GLY 24 24 24 GLY GLY D . n D 1 25 ALA 25 25 25 ALA ALA D . n D 1 26 ILE 26 26 26 ILE ILE D . n D 1 27 LEU 27 27 27 LEU LEU D . n D 1 28 SER 28 28 28 SER SER D . n D 1 29 SER 29 29 29 SER SER D . n D 1 30 THR 30 30 30 THR THR D . n D 1 31 ASN 31 31 31 ASN ASN D . n D 1 32 VAL 32 32 32 VAL VAL D . n D 1 33 GLY 33 33 33 GLY GLY D . n D 1 34 SER 34 34 34 SER SER D . n D 1 35 ASN 35 35 35 ASN ASN D . n D 1 36 THR 36 36 36 THR THR D . n D 1 37 TYR 37 37 37 TYR TYR D . n E 1 1 LYS 1 1 ? ? ? E . n E 1 2 CYS 2 2 2 CYS CYS E . n E 1 3 ASN 3 3 3 ASN ASN E . n E 1 4 THR 4 4 4 THR THR E . n E 1 5 ALA 5 5 5 ALA ALA E . n E 1 6 THR 6 6 6 THR THR E . n E 1 7 CYS 7 7 7 CYS CYS E . n E 1 8 ALA 8 8 8 ALA ALA E . n E 1 9 THR 9 9 9 THR THR E . n E 1 10 GLN 10 10 10 GLN GLN E . n E 1 11 ARG 11 11 11 ARG ARG E . n E 1 12 LEU 12 12 12 LEU LEU E . n E 1 13 ALA 13 13 13 ALA ALA E . n E 1 14 ASN 14 14 14 ASN ASN E . n E 1 15 PHE 15 15 15 PHE PHE E . n E 1 16 LEU 16 16 16 LEU LEU E . n E 1 17 VAL 17 17 17 VAL VAL E . n E 1 18 HIS 18 18 18 HIS HIS E . n E 1 19 SER 19 19 19 SER SER E . n E 1 20 SER 20 20 20 SER SER E . n E 1 21 ASN 21 21 21 ASN ASN E . n E 1 22 ASN 22 22 22 ASN ASN E . n E 1 23 PHE 23 23 23 PHE PHE E . n E 1 24 GLY 24 24 24 GLY GLY E . n E 1 25 ALA 25 25 25 ALA ALA E . n E 1 26 ILE 26 26 26 ILE ILE E . n E 1 27 LEU 27 27 27 LEU LEU E . n E 1 28 SER 28 28 28 SER SER E . n E 1 29 SER 29 29 29 SER SER E . n E 1 30 THR 30 30 30 THR THR E . n E 1 31 ASN 31 31 31 ASN ASN E . n E 1 32 VAL 32 32 32 VAL VAL E . n E 1 33 GLY 33 33 33 GLY GLY E . n E 1 34 SER 34 34 34 SER SER E . n E 1 35 ASN 35 35 35 ASN ASN E . n E 1 36 THR 36 36 36 THR THR E . n E 1 37 TYR 37 37 37 TYR TYR E . n F 1 1 LYS 1 1 ? ? ? F . n F 1 2 CYS 2 2 2 CYS CYS F . n F 1 3 ASN 3 3 3 ASN ASN F . n F 1 4 THR 4 4 4 THR THR F . n F 1 5 ALA 5 5 5 ALA ALA F . n F 1 6 THR 6 6 6 THR THR F . n F 1 7 CYS 7 7 7 CYS CYS F . n F 1 8 ALA 8 8 8 ALA ALA F . n F 1 9 THR 9 9 9 THR THR F . n F 1 10 GLN 10 10 10 GLN GLN F . n F 1 11 ARG 11 11 11 ARG ARG F . n F 1 12 LEU 12 12 12 LEU LEU F . n F 1 13 ALA 13 13 13 ALA ALA F . n F 1 14 ASN 14 14 14 ASN ASN F . n F 1 15 PHE 15 15 15 PHE PHE F . n F 1 16 LEU 16 16 16 LEU LEU F . n F 1 17 VAL 17 17 17 VAL VAL F . n F 1 18 HIS 18 18 18 HIS HIS F . n F 1 19 SER 19 19 19 SER SER F . n F 1 20 SER 20 20 20 SER SER F . n F 1 21 ASN 21 21 21 ASN ASN F . n F 1 22 ASN 22 22 22 ASN ASN F . n F 1 23 PHE 23 23 23 PHE PHE F . n F 1 24 GLY 24 24 24 GLY GLY F . n F 1 25 ALA 25 25 25 ALA ALA F . n F 1 26 ILE 26 26 26 ILE ILE F . n F 1 27 LEU 27 27 27 LEU LEU F . n F 1 28 SER 28 28 28 SER SER F . n F 1 29 SER 29 29 29 SER SER F . n F 1 30 THR 30 30 30 THR THR F . n F 1 31 ASN 31 31 31 ASN ASN F . n F 1 32 VAL 32 32 32 VAL VAL F . n F 1 33 GLY 33 33 33 GLY GLY F . n F 1 34 SER 34 34 34 SER SER F . n F 1 35 ASN 35 35 35 ASN ASN F . n F 1 36 THR 36 36 36 THR THR F . n F 1 37 TYR 37 37 37 TYR TYR F . n G 1 1 LYS 1 1 ? ? ? G . n G 1 2 CYS 2 2 2 CYS CYS G . n G 1 3 ASN 3 3 3 ASN ASN G . n G 1 4 THR 4 4 4 THR THR G . n G 1 5 ALA 5 5 5 ALA ALA G . n G 1 6 THR 6 6 6 THR THR G . n G 1 7 CYS 7 7 7 CYS CYS G . n G 1 8 ALA 8 8 8 ALA ALA G . n G 1 9 THR 9 9 9 THR THR G . n G 1 10 GLN 10 10 10 GLN GLN G . n G 1 11 ARG 11 11 11 ARG ARG G . n G 1 12 LEU 12 12 12 LEU LEU G . n G 1 13 ALA 13 13 13 ALA ALA G . n G 1 14 ASN 14 14 14 ASN ASN G . n G 1 15 PHE 15 15 15 PHE PHE G . n G 1 16 LEU 16 16 16 LEU LEU G . n G 1 17 VAL 17 17 17 VAL VAL G . n G 1 18 HIS 18 18 18 HIS HIS G . n G 1 19 SER 19 19 19 SER SER G . n G 1 20 SER 20 20 20 SER SER G . n G 1 21 ASN 21 21 21 ASN ASN G . n G 1 22 ASN 22 22 22 ASN ASN G . n G 1 23 PHE 23 23 23 PHE PHE G . n G 1 24 GLY 24 24 24 GLY GLY G . n G 1 25 ALA 25 25 25 ALA ALA G . n G 1 26 ILE 26 26 26 ILE ILE G . n G 1 27 LEU 27 27 27 LEU LEU G . n G 1 28 SER 28 28 28 SER SER G . n G 1 29 SER 29 29 29 SER SER G . n G 1 30 THR 30 30 30 THR THR G . n G 1 31 ASN 31 31 31 ASN ASN G . n G 1 32 VAL 32 32 32 VAL VAL G . n G 1 33 GLY 33 33 33 GLY GLY G . n G 1 34 SER 34 34 34 SER SER G . n G 1 35 ASN 35 35 35 ASN ASN G . n G 1 36 THR 36 36 36 THR THR G . n G 1 37 TYR 37 37 37 TYR TYR G . n H 1 1 LYS 1 1 ? ? ? H . n H 1 2 CYS 2 2 2 CYS CYS H . n H 1 3 ASN 3 3 3 ASN ASN H . n H 1 4 THR 4 4 4 THR THR H . n H 1 5 ALA 5 5 5 ALA ALA H . n H 1 6 THR 6 6 6 THR THR H . n H 1 7 CYS 7 7 7 CYS CYS H . n H 1 8 ALA 8 8 8 ALA ALA H . n H 1 9 THR 9 9 9 THR THR H . n H 1 10 GLN 10 10 10 GLN GLN H . n H 1 11 ARG 11 11 11 ARG ARG H . n H 1 12 LEU 12 12 12 LEU LEU H . n H 1 13 ALA 13 13 13 ALA ALA H . n H 1 14 ASN 14 14 14 ASN ASN H . n H 1 15 PHE 15 15 15 PHE PHE H . n H 1 16 LEU 16 16 16 LEU LEU H . n H 1 17 VAL 17 17 17 VAL VAL H . n H 1 18 HIS 18 18 18 HIS HIS H . n H 1 19 SER 19 19 19 SER SER H . n H 1 20 SER 20 20 20 SER SER H . n H 1 21 ASN 21 21 21 ASN ASN H . n H 1 22 ASN 22 22 22 ASN ASN H . n H 1 23 PHE 23 23 23 PHE PHE H . n H 1 24 GLY 24 24 24 GLY GLY H . n H 1 25 ALA 25 25 25 ALA ALA H . n H 1 26 ILE 26 26 26 ILE ILE H . n H 1 27 LEU 27 27 27 LEU LEU H . n H 1 28 SER 28 28 28 SER SER H . n H 1 29 SER 29 29 29 SER SER H . n H 1 30 THR 30 30 30 THR THR H . n H 1 31 ASN 31 31 31 ASN ASN H . n H 1 32 VAL 32 32 32 VAL VAL H . n H 1 33 GLY 33 33 33 GLY GLY H . n H 1 34 SER 34 34 34 SER SER H . n H 1 35 ASN 35 35 35 ASN ASN H . n H 1 36 THR 36 36 36 THR THR H . n H 1 37 TYR 37 37 37 TYR TYR H . n I 1 1 LYS 1 1 ? ? ? I . n I 1 2 CYS 2 2 2 CYS CYS I . n I 1 3 ASN 3 3 3 ASN ASN I . n I 1 4 THR 4 4 4 THR THR I . n I 1 5 ALA 5 5 5 ALA ALA I . n I 1 6 THR 6 6 6 THR THR I . n I 1 7 CYS 7 7 7 CYS CYS I . n I 1 8 ALA 8 8 8 ALA ALA I . n I 1 9 THR 9 9 9 THR THR I . n I 1 10 GLN 10 10 10 GLN GLN I . n I 1 11 ARG 11 11 11 ARG ARG I . n I 1 12 LEU 12 12 12 LEU LEU I . n I 1 13 ALA 13 13 13 ALA ALA I . n I 1 14 ASN 14 14 14 ASN ASN I . n I 1 15 PHE 15 15 15 PHE PHE I . n I 1 16 LEU 16 16 16 LEU LEU I . n I 1 17 VAL 17 17 17 VAL VAL I . n I 1 18 HIS 18 18 18 HIS HIS I . n I 1 19 SER 19 19 19 SER SER I . n I 1 20 SER 20 20 20 SER SER I . n I 1 21 ASN 21 21 21 ASN ASN I . n I 1 22 ASN 22 22 22 ASN ASN I . n I 1 23 PHE 23 23 23 PHE PHE I . n I 1 24 GLY 24 24 24 GLY GLY I . n I 1 25 ALA 25 25 25 ALA ALA I . n I 1 26 ILE 26 26 26 ILE ILE I . n I 1 27 LEU 27 27 27 LEU LEU I . n I 1 28 SER 28 28 28 SER SER I . n I 1 29 SER 29 29 29 SER SER I . n I 1 30 THR 30 30 30 THR THR I . n I 1 31 ASN 31 31 31 ASN ASN I . n I 1 32 VAL 32 32 32 VAL VAL I . n I 1 33 GLY 33 33 33 GLY GLY I . n I 1 34 SER 34 34 34 SER SER I . n I 1 35 ASN 35 35 35 ASN ASN I . n I 1 36 THR 36 36 36 THR THR I . n I 1 37 TYR 37 37 37 TYR TYR I . n J 1 1 LYS 1 1 ? ? ? J . n J 1 2 CYS 2 2 2 CYS CYS J . n J 1 3 ASN 3 3 3 ASN ASN J . n J 1 4 THR 4 4 4 THR THR J . n J 1 5 ALA 5 5 5 ALA ALA J . n J 1 6 THR 6 6 6 THR THR J . n J 1 7 CYS 7 7 7 CYS CYS J . n J 1 8 ALA 8 8 8 ALA ALA J . n J 1 9 THR 9 9 9 THR THR J . n J 1 10 GLN 10 10 10 GLN GLN J . n J 1 11 ARG 11 11 11 ARG ARG J . n J 1 12 LEU 12 12 12 LEU LEU J . n J 1 13 ALA 13 13 13 ALA ALA J . n J 1 14 ASN 14 14 14 ASN ASN J . n J 1 15 PHE 15 15 15 PHE PHE J . n J 1 16 LEU 16 16 16 LEU LEU J . n J 1 17 VAL 17 17 17 VAL VAL J . n J 1 18 HIS 18 18 18 HIS HIS J . n J 1 19 SER 19 19 19 SER SER J . n J 1 20 SER 20 20 20 SER SER J . n J 1 21 ASN 21 21 21 ASN ASN J . n J 1 22 ASN 22 22 22 ASN ASN J . n J 1 23 PHE 23 23 23 PHE PHE J . n J 1 24 GLY 24 24 24 GLY GLY J . n J 1 25 ALA 25 25 25 ALA ALA J . n J 1 26 ILE 26 26 26 ILE ILE J . n J 1 27 LEU 27 27 27 LEU LEU J . n J 1 28 SER 28 28 28 SER SER J . n J 1 29 SER 29 29 29 SER SER J . n J 1 30 THR 30 30 30 THR THR J . n J 1 31 ASN 31 31 31 ASN ASN J . n J 1 32 VAL 32 32 32 VAL VAL J . n J 1 33 GLY 33 33 33 GLY GLY J . n J 1 34 SER 34 34 34 SER SER J . n J 1 35 ASN 35 35 35 ASN ASN J . n J 1 36 THR 36 36 36 THR THR J . n J 1 37 TYR 37 37 37 TYR TYR J . n K 1 1 LYS 1 1 ? ? ? K . n K 1 2 CYS 2 2 2 CYS CYS K . n K 1 3 ASN 3 3 3 ASN ASN K . n K 1 4 THR 4 4 4 THR THR K . n K 1 5 ALA 5 5 5 ALA ALA K . n K 1 6 THR 6 6 6 THR THR K . n K 1 7 CYS 7 7 7 CYS CYS K . n K 1 8 ALA 8 8 8 ALA ALA K . n K 1 9 THR 9 9 9 THR THR K . n K 1 10 GLN 10 10 10 GLN GLN K . n K 1 11 ARG 11 11 11 ARG ARG K . n K 1 12 LEU 12 12 12 LEU LEU K . n K 1 13 ALA 13 13 13 ALA ALA K . n K 1 14 ASN 14 14 14 ASN ASN K . n K 1 15 PHE 15 15 15 PHE PHE K . n K 1 16 LEU 16 16 16 LEU LEU K . n K 1 17 VAL 17 17 17 VAL VAL K . n K 1 18 HIS 18 18 18 HIS HIS K . n K 1 19 SER 19 19 19 SER SER K . n K 1 20 SER 20 20 20 SER SER K . n K 1 21 ASN 21 21 21 ASN ASN K . n K 1 22 ASN 22 22 22 ASN ASN K . n K 1 23 PHE 23 23 23 PHE PHE K . n K 1 24 GLY 24 24 24 GLY GLY K . n K 1 25 ALA 25 25 25 ALA ALA K . n K 1 26 ILE 26 26 26 ILE ILE K . n K 1 27 LEU 27 27 27 LEU LEU K . n K 1 28 SER 28 28 28 SER SER K . n K 1 29 SER 29 29 29 SER SER K . n K 1 30 THR 30 30 30 THR THR K . n K 1 31 ASN 31 31 31 ASN ASN K . n K 1 32 VAL 32 32 32 VAL VAL K . n K 1 33 GLY 33 33 33 GLY GLY K . n K 1 34 SER 34 34 34 SER SER K . n K 1 35 ASN 35 35 35 ASN ASN K . n K 1 36 THR 36 36 36 THR THR K . n K 1 37 TYR 37 37 37 TYR TYR K . n L 1 1 LYS 1 1 ? ? ? L . n L 1 2 CYS 2 2 2 CYS CYS L . n L 1 3 ASN 3 3 3 ASN ASN L . n L 1 4 THR 4 4 4 THR THR L . n L 1 5 ALA 5 5 5 ALA ALA L . n L 1 6 THR 6 6 6 THR THR L . n L 1 7 CYS 7 7 7 CYS CYS L . n L 1 8 ALA 8 8 8 ALA ALA L . n L 1 9 THR 9 9 9 THR THR L . n L 1 10 GLN 10 10 10 GLN GLN L . n L 1 11 ARG 11 11 11 ARG ARG L . n L 1 12 LEU 12 12 12 LEU LEU L . n L 1 13 ALA 13 13 13 ALA ALA L . n L 1 14 ASN 14 14 14 ASN ASN L . n L 1 15 PHE 15 15 15 PHE PHE L . n L 1 16 LEU 16 16 16 LEU LEU L . n L 1 17 VAL 17 17 17 VAL VAL L . n L 1 18 HIS 18 18 18 HIS HIS L . n L 1 19 SER 19 19 19 SER SER L . n L 1 20 SER 20 20 20 SER SER L . n L 1 21 ASN 21 21 21 ASN ASN L . n L 1 22 ASN 22 22 22 ASN ASN L . n L 1 23 PHE 23 23 23 PHE PHE L . n L 1 24 GLY 24 24 24 GLY GLY L . n L 1 25 ALA 25 25 25 ALA ALA L . n L 1 26 ILE 26 26 26 ILE ILE L . n L 1 27 LEU 27 27 27 LEU LEU L . n L 1 28 SER 28 28 28 SER SER L . n L 1 29 SER 29 29 29 SER SER L . n L 1 30 THR 30 30 30 THR THR L . n L 1 31 ASN 31 31 31 ASN ASN L . n L 1 32 VAL 32 32 32 VAL VAL L . n L 1 33 GLY 33 33 33 GLY GLY L . n L 1 34 SER 34 34 34 SER SER L . n L 1 35 ASN 35 35 35 ASN ASN L . n L 1 36 THR 36 36 36 THR THR L . n L 1 37 TYR 37 37 37 TYR TYR L . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9ULZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9ULZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9ULZ _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9ULZ _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 3204 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.649 ? 4368 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 7.579 ? 456 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.040 ? 540 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.001 ? 576 ? f_plane_restr ? ? ? # _struct.entry_id 9ULZ _struct.title 'Cryo-EM structure of hIAPP fibrils extracted from a donor with T2D and pancreatic cancer' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9ULZ _struct_keywords.text 'Amyloid fibrils, type II diabetes, hIAPP, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IAPP_HUMAN _struct_ref.pdbx_db_accession P10997 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KCNTATCATQRLANFLVHSSNNFGAILSSTNVGSNTY _struct_ref.pdbx_align_begin 34 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9ULZ A 1 ? 37 ? P10997 34 ? 70 ? 1 37 2 1 9ULZ B 1 ? 37 ? P10997 34 ? 70 ? 1 37 3 1 9ULZ C 1 ? 37 ? P10997 34 ? 70 ? 1 37 4 1 9ULZ D 1 ? 37 ? P10997 34 ? 70 ? 1 37 5 1 9ULZ E 1 ? 37 ? P10997 34 ? 70 ? 1 37 6 1 9ULZ F 1 ? 37 ? P10997 34 ? 70 ? 1 37 7 1 9ULZ G 1 ? 37 ? P10997 34 ? 70 ? 1 37 8 1 9ULZ H 1 ? 37 ? P10997 34 ? 70 ? 1 37 9 1 9ULZ I 1 ? 37 ? P10997 34 ? 70 ? 1 37 10 1 9ULZ J 1 ? 37 ? P10997 34 ? 70 ? 1 37 11 1 9ULZ K 1 ? 37 ? P10997 34 ? 70 ? 1 37 12 1 9ULZ L 1 ? 37 ? P10997 34 ? 70 ? 1 37 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 7 SG ? ? A CYS 2 A CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? B CYS 2 SG ? ? ? 1_555 B CYS 7 SG ? ? B CYS 2 B CYS 7 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf3 disulf ? ? C CYS 2 SG ? ? ? 1_555 C CYS 7 SG ? ? C CYS 2 C CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? D CYS 2 SG ? ? ? 1_555 D CYS 7 SG ? ? D CYS 2 D CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf5 disulf ? ? E CYS 2 SG ? ? ? 1_555 E CYS 7 SG ? ? E CYS 2 E CYS 7 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf6 disulf ? ? F CYS 2 SG ? ? ? 1_555 F CYS 7 SG ? ? F CYS 2 F CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf7 disulf ? ? G CYS 2 SG ? ? ? 1_555 G CYS 7 SG ? ? G CYS 2 G CYS 7 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf8 disulf ? ? H CYS 2 SG ? ? ? 1_555 H CYS 7 SG ? ? H CYS 2 H CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf9 disulf ? ? I CYS 2 SG ? ? ? 1_555 I CYS 7 SG ? ? I CYS 2 I CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf10 disulf ? ? J CYS 2 SG ? ? ? 1_555 J CYS 7 SG ? ? J CYS 2 J CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf11 disulf ? ? K CYS 2 SG ? ? ? 1_555 K CYS 7 SG ? ? K CYS 2 K CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf12 disulf ? ? L CYS 2 SG ? ? ? 1_555 L CYS 7 SG ? ? L CYS 2 L CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 2 ? CYS A 7 ? CYS A 2 ? 1_555 CYS A 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 2 ? CYS B 7 ? CYS B 2 ? 1_555 CYS B 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS C 2 ? CYS C 7 ? CYS C 2 ? 1_555 CYS C 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS D 2 ? CYS D 7 ? CYS D 2 ? 1_555 CYS D 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS E 2 ? CYS E 7 ? CYS E 2 ? 1_555 CYS E 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS F 2 ? CYS F 7 ? CYS F 2 ? 1_555 CYS F 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS G 2 ? CYS G 7 ? CYS G 2 ? 1_555 CYS G 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS H 2 ? CYS H 7 ? CYS H 2 ? 1_555 CYS H 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS I 2 ? CYS I 7 ? CYS I 2 ? 1_555 CYS I 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 10 CYS J 2 ? CYS J 7 ? CYS J 2 ? 1_555 CYS J 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 11 CYS K 2 ? CYS K 7 ? CYS K 2 ? 1_555 CYS K 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 12 CYS L 2 ? CYS L 7 ? CYS L 2 ? 1_555 CYS L 7 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? AA3 ? 6 ? AA4 ? 6 ? AA5 ? 6 ? AA6 ? 6 ? AA7 ? 6 ? AA8 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA3 5 6 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA4 5 6 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA5 5 6 ? parallel AA6 1 2 ? parallel AA6 2 3 ? parallel AA6 3 4 ? parallel AA6 4 5 ? parallel AA6 5 6 ? parallel AA7 1 2 ? parallel AA7 2 3 ? parallel AA7 3 4 ? parallel AA7 4 5 ? parallel AA7 5 6 ? parallel AA8 1 2 ? parallel AA8 2 3 ? parallel AA8 3 4 ? parallel AA8 4 5 ? parallel AA8 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA G 8 ? HIS G 18 ? ALA G 8 HIS G 18 AA1 2 ALA E 8 ? HIS E 18 ? ALA E 8 HIS E 18 AA1 3 ALA C 8 ? HIS C 18 ? ALA C 8 HIS C 18 AA1 4 ALA A 8 ? HIS A 18 ? ALA A 8 HIS A 18 AA1 5 ALA K 8 ? HIS K 18 ? ALA K 8 HIS K 18 AA1 6 ALA I 8 ? HIS I 18 ? ALA I 8 HIS I 18 AA2 1 ASN G 21 ? ASN G 22 ? ASN G 21 ASN G 22 AA2 2 ASN E 21 ? ASN E 22 ? ASN E 21 ASN E 22 AA2 3 ASN C 21 ? ASN C 22 ? ASN C 21 ASN C 22 AA2 4 ASN A 21 ? ASN A 22 ? ASN A 21 ASN A 22 AA2 5 ASN K 21 ? ASN K 22 ? ASN K 21 ASN K 22 AA2 6 ASN I 21 ? ASN I 22 ? ASN I 21 ASN I 22 AA3 1 ILE G 26 ? THR G 30 ? ILE G 26 THR G 30 AA3 2 ILE E 26 ? THR E 30 ? ILE E 26 THR E 30 AA3 3 ILE C 26 ? THR C 30 ? ILE C 26 THR C 30 AA3 4 ILE A 26 ? THR A 30 ? ILE A 26 THR A 30 AA3 5 ILE K 26 ? THR K 30 ? ILE K 26 THR K 30 AA3 6 ILE I 26 ? THR I 30 ? ILE I 26 THR I 30 AA4 1 ASN G 35 ? THR G 36 ? ASN G 35 THR G 36 AA4 2 ASN E 35 ? THR E 36 ? ASN E 35 THR E 36 AA4 3 ASN C 35 ? THR C 36 ? ASN C 35 THR C 36 AA4 4 ASN A 35 ? THR A 36 ? ASN A 35 THR A 36 AA4 5 ASN K 35 ? THR K 36 ? ASN K 35 THR K 36 AA4 6 ASN I 35 ? THR I 36 ? ASN I 35 THR I 36 AA5 1 ALA H 8 ? HIS H 18 ? ALA H 8 HIS H 18 AA5 2 ALA F 8 ? HIS F 18 ? ALA F 8 HIS F 18 AA5 3 ALA D 8 ? HIS D 18 ? ALA D 8 HIS D 18 AA5 4 ALA B 8 ? HIS B 18 ? ALA B 8 HIS B 18 AA5 5 ALA L 8 ? HIS L 18 ? ALA L 8 HIS L 18 AA5 6 ALA J 8 ? HIS J 18 ? ALA J 8 HIS J 18 AA6 1 ASN H 21 ? ASN H 22 ? ASN H 21 ASN H 22 AA6 2 ASN F 21 ? ASN F 22 ? ASN F 21 ASN F 22 AA6 3 ASN D 21 ? ASN D 22 ? ASN D 21 ASN D 22 AA6 4 ASN B 21 ? ASN B 22 ? ASN B 21 ASN B 22 AA6 5 ASN L 21 ? ASN L 22 ? ASN L 21 ASN L 22 AA6 6 ASN J 21 ? ASN J 22 ? ASN J 21 ASN J 22 AA7 1 ILE H 26 ? SER H 29 ? ILE H 26 SER H 29 AA7 2 ILE F 26 ? SER F 29 ? ILE F 26 SER F 29 AA7 3 ILE D 26 ? THR D 30 ? ILE D 26 THR D 30 AA7 4 ILE B 26 ? THR B 30 ? ILE B 26 THR B 30 AA7 5 ILE L 26 ? THR L 30 ? ILE L 26 THR L 30 AA7 6 ILE J 26 ? THR J 30 ? ILE J 26 THR J 30 AA8 1 ASN H 35 ? THR H 36 ? ASN H 35 THR H 36 AA8 2 ASN F 35 ? THR F 36 ? ASN F 35 THR F 36 AA8 3 ASN D 35 ? THR D 36 ? ASN D 35 THR D 36 AA8 4 ASN B 35 ? THR B 36 ? ASN B 35 THR B 36 AA8 5 ASN L 35 ? THR L 36 ? ASN L 35 THR L 36 AA8 6 ASN J 35 ? THR J 36 ? ASN J 35 THR J 36 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL G 17 ? O VAL G 17 N LEU E 16 ? N LEU E 16 AA1 2 3 O VAL E 17 ? O VAL E 17 N LEU C 16 ? N LEU C 16 AA1 3 4 O VAL C 17 ? O VAL C 17 N LEU A 16 ? N LEU A 16 AA1 4 5 N VAL A 17 ? N VAL A 17 O LEU K 16 ? O LEU K 16 AA1 5 6 O VAL K 17 ? O VAL K 17 N LEU I 16 ? N LEU I 16 AA2 1 2 O ASN G 22 ? O ASN G 22 N ASN E 21 ? N ASN E 21 AA2 2 3 O ASN E 22 ? O ASN E 22 N ASN C 21 ? N ASN C 21 AA2 3 4 O ASN C 22 ? O ASN C 22 N ASN A 21 ? N ASN A 21 AA2 4 5 N ASN A 22 ? N ASN A 22 O ASN K 21 ? O ASN K 21 AA2 5 6 O ASN K 22 ? O ASN K 22 N ASN I 21 ? N ASN I 21 AA3 1 2 O THR G 30 ? O THR G 30 N SER E 29 ? N SER E 29 AA3 2 3 O THR E 30 ? O THR E 30 N SER C 29 ? N SER C 29 AA3 3 4 O THR C 30 ? O THR C 30 N SER A 29 ? N SER A 29 AA3 4 5 N THR A 30 ? N THR A 30 O SER K 29 ? O SER K 29 AA3 5 6 O THR K 30 ? O THR K 30 N SER I 29 ? N SER I 29 AA4 1 2 O THR G 36 ? O THR G 36 N ASN E 35 ? N ASN E 35 AA4 2 3 O THR E 36 ? O THR E 36 N ASN C 35 ? N ASN C 35 AA4 3 4 O THR C 36 ? O THR C 36 N ASN A 35 ? N ASN A 35 AA4 4 5 N THR A 36 ? N THR A 36 O ASN K 35 ? O ASN K 35 AA4 5 6 O THR K 36 ? O THR K 36 N ASN I 35 ? N ASN I 35 AA5 1 2 O VAL H 17 ? O VAL H 17 N LEU F 16 ? N LEU F 16 AA5 2 3 O VAL F 17 ? O VAL F 17 N LEU D 16 ? N LEU D 16 AA5 3 4 O VAL D 17 ? O VAL D 17 N LEU B 16 ? N LEU B 16 AA5 4 5 N VAL B 17 ? N VAL B 17 O LEU L 16 ? O LEU L 16 AA5 5 6 O VAL L 17 ? O VAL L 17 N LEU J 16 ? N LEU J 16 AA6 1 2 O ASN H 22 ? O ASN H 22 N ASN F 21 ? N ASN F 21 AA6 2 3 O ASN F 22 ? O ASN F 22 N ASN D 21 ? N ASN D 21 AA6 3 4 O ASN D 22 ? O ASN D 22 N ASN B 21 ? N ASN B 21 AA6 4 5 N ASN B 22 ? N ASN B 22 O ASN L 21 ? O ASN L 21 AA6 5 6 O ASN L 22 ? O ASN L 22 N ASN J 21 ? N ASN J 21 AA7 1 2 O SER H 28 ? O SER H 28 N SER F 29 ? N SER F 29 AA7 2 3 O SER F 28 ? O SER F 28 N SER D 29 ? N SER D 29 AA7 3 4 O THR D 30 ? O THR D 30 N SER B 29 ? N SER B 29 AA7 4 5 N THR B 30 ? N THR B 30 O SER L 29 ? O SER L 29 AA7 5 6 O THR L 30 ? O THR L 30 N SER J 29 ? N SER J 29 AA8 1 2 O THR H 36 ? O THR H 36 N ASN F 35 ? N ASN F 35 AA8 2 3 O THR F 36 ? O THR F 36 N ASN D 35 ? N ASN D 35 AA8 3 4 O THR D 36 ? O THR D 36 N ASN B 35 ? N ASN B 35 AA8 4 5 N THR B 36 ? N THR B 36 O ASN L 35 ? O ASN L 35 AA8 5 6 O THR L 36 ? O THR L 36 N ASN J 35 ? N ASN J 35 # _pdbx_entry_details.entry_id 9ULZ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 4 ? ? -142.50 29.90 2 1 THR B 4 ? ? -142.40 29.81 3 1 ALA B 25 ? ? 60.02 65.59 4 1 THR C 4 ? ? -142.42 29.86 5 1 ALA C 25 ? ? 60.02 65.68 6 1 THR D 4 ? ? -142.41 29.86 7 1 ALA D 25 ? ? 60.00 65.67 8 1 THR E 4 ? ? -142.45 29.93 9 1 THR F 4 ? ? -142.41 29.83 10 1 THR G 4 ? ? -142.43 29.89 11 1 THR H 4 ? ? -142.41 29.79 12 1 THR I 4 ? ? -142.45 29.81 13 1 ALA I 25 ? ? 60.03 65.66 14 1 THR J 4 ? ? -142.45 29.81 15 1 ALA J 25 ? ? 60.03 65.66 16 1 THR K 4 ? ? -142.38 29.81 17 1 THR L 4 ? ? -142.38 29.81 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9ULZ _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'AB INITIO MODEL' # _em_3d_reconstruction.entry_id 9ULZ _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 19086 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type TISSUE _em_entity_assembly.name 'hIAPP fibrils' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9ULZ _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 3500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9ULZ _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument 'FEI VITROBOT MARK II' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9ULZ _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 1 ? A LYS 1 2 1 Y 1 B LYS 1 ? B LYS 1 3 1 Y 1 C LYS 1 ? C LYS 1 4 1 Y 1 D LYS 1 ? D LYS 1 5 1 Y 1 E LYS 1 ? E LYS 1 6 1 Y 1 F LYS 1 ? F LYS 1 7 1 Y 1 G LYS 1 ? G LYS 1 8 1 Y 1 H LYS 1 ? H LYS 1 9 1 Y 1 I LYS 1 ? I LYS 1 10 1 Y 1 J LYS 1 ? J LYS 1 11 1 Y 1 K LYS 1 ? K LYS 1 12 1 Y 1 L LYS 1 ? L LYS 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 CYS N N N N 58 CYS CA C N R 59 CYS C C N N 60 CYS O O N N 61 CYS CB C N N 62 CYS SG S N N 63 CYS OXT O N N 64 CYS H H N N 65 CYS H2 H N N 66 CYS HA H N N 67 CYS HB2 H N N 68 CYS HB3 H N N 69 CYS HG H N N 70 CYS HXT H N N 71 GLN N N N N 72 GLN CA C N S 73 GLN C C N N 74 GLN O O N N 75 GLN CB C N N 76 GLN CG C N N 77 GLN CD C N N 78 GLN OE1 O N N 79 GLN NE2 N N N 80 GLN OXT O N N 81 GLN H H N N 82 GLN H2 H N N 83 GLN HA H N N 84 GLN HB2 H N N 85 GLN HB3 H N N 86 GLN HG2 H N N 87 GLN HG3 H N N 88 GLN HE21 H N N 89 GLN HE22 H N N 90 GLN HXT H N N 91 GLY N N N N 92 GLY CA C N N 93 GLY C C N N 94 GLY O O N N 95 GLY OXT O N N 96 GLY H H N N 97 GLY H2 H N N 98 GLY HA2 H N N 99 GLY HA3 H N N 100 GLY HXT H N N 101 HIS N N N N 102 HIS CA C N S 103 HIS C C N N 104 HIS O O N N 105 HIS CB C N N 106 HIS CG C Y N 107 HIS ND1 N Y N 108 HIS CD2 C Y N 109 HIS CE1 C Y N 110 HIS NE2 N Y N 111 HIS OXT O N N 112 HIS H H N N 113 HIS H2 H N N 114 HIS HA H N N 115 HIS HB2 H N N 116 HIS HB3 H N N 117 HIS HD1 H N N 118 HIS HD2 H N N 119 HIS HE1 H N N 120 HIS HE2 H N N 121 HIS HXT H N N 122 ILE N N N N 123 ILE CA C N S 124 ILE C C N N 125 ILE O O N N 126 ILE CB C N S 127 ILE CG1 C N N 128 ILE CG2 C N N 129 ILE CD1 C N N 130 ILE OXT O N N 131 ILE H H N N 132 ILE H2 H N N 133 ILE HA H N N 134 ILE HB H N N 135 ILE HG12 H N N 136 ILE HG13 H N N 137 ILE HG21 H N N 138 ILE HG22 H N N 139 ILE HG23 H N N 140 ILE HD11 H N N 141 ILE HD12 H N N 142 ILE HD13 H N N 143 ILE HXT H N N 144 LEU N N N N 145 LEU CA C N S 146 LEU C C N N 147 LEU O O N N 148 LEU CB C N N 149 LEU CG C N N 150 LEU CD1 C N N 151 LEU CD2 C N N 152 LEU OXT O N N 153 LEU H H N N 154 LEU H2 H N N 155 LEU HA H N N 156 LEU HB2 H N N 157 LEU HB3 H N N 158 LEU HG H N N 159 LEU HD11 H N N 160 LEU HD12 H N N 161 LEU HD13 H N N 162 LEU HD21 H N N 163 LEU HD22 H N N 164 LEU HD23 H N N 165 LEU HXT H N N 166 LYS N N N N 167 LYS CA C N S 168 LYS C C N N 169 LYS O O N N 170 LYS CB C N N 171 LYS CG C N N 172 LYS CD C N N 173 LYS CE C N N 174 LYS NZ N N N 175 LYS OXT O N N 176 LYS H H N N 177 LYS H2 H N N 178 LYS HA H N N 179 LYS HB2 H N N 180 LYS HB3 H N N 181 LYS HG2 H N N 182 LYS HG3 H N N 183 LYS HD2 H N N 184 LYS HD3 H N N 185 LYS HE2 H N N 186 LYS HE3 H N N 187 LYS HZ1 H N N 188 LYS HZ2 H N N 189 LYS HZ3 H N N 190 LYS HXT H N N 191 PHE N N N N 192 PHE CA C N S 193 PHE C C N N 194 PHE O O N N 195 PHE CB C N N 196 PHE CG C Y N 197 PHE CD1 C Y N 198 PHE CD2 C Y N 199 PHE CE1 C Y N 200 PHE CE2 C Y N 201 PHE CZ C Y N 202 PHE OXT O N N 203 PHE H H N N 204 PHE H2 H N N 205 PHE HA H N N 206 PHE HB2 H N N 207 PHE HB3 H N N 208 PHE HD1 H N N 209 PHE HD2 H N N 210 PHE HE1 H N N 211 PHE HE2 H N N 212 PHE HZ H N N 213 PHE HXT H N N 214 SER N N N N 215 SER CA C N S 216 SER C C N N 217 SER O O N N 218 SER CB C N N 219 SER OG O N N 220 SER OXT O N N 221 SER H H N N 222 SER H2 H N N 223 SER HA H N N 224 SER HB2 H N N 225 SER HB3 H N N 226 SER HG H N N 227 SER HXT H N N 228 THR N N N N 229 THR CA C N S 230 THR C C N N 231 THR O O N N 232 THR CB C N R 233 THR OG1 O N N 234 THR CG2 C N N 235 THR OXT O N N 236 THR H H N N 237 THR H2 H N N 238 THR HA H N N 239 THR HB H N N 240 THR HG1 H N N 241 THR HG21 H N N 242 THR HG22 H N N 243 THR HG23 H N N 244 THR HXT H N N 245 TYR N N N N 246 TYR CA C N S 247 TYR C C N N 248 TYR O O N N 249 TYR CB C N N 250 TYR CG C Y N 251 TYR CD1 C Y N 252 TYR CD2 C Y N 253 TYR CE1 C Y N 254 TYR CE2 C Y N 255 TYR CZ C Y N 256 TYR OH O N N 257 TYR OXT O N N 258 TYR H H N N 259 TYR H2 H N N 260 TYR HA H N N 261 TYR HB2 H N N 262 TYR HB3 H N N 263 TYR HD1 H N N 264 TYR HD2 H N N 265 TYR HE1 H N N 266 TYR HE2 H N N 267 TYR HH H N N 268 TYR HXT H N N 269 VAL N N N N 270 VAL CA C N S 271 VAL C C N N 272 VAL O O N N 273 VAL CB C N N 274 VAL CG1 C N N 275 VAL CG2 C N N 276 VAL OXT O N N 277 VAL H H N N 278 VAL H2 H N N 279 VAL HA H N N 280 VAL HB H N N 281 VAL HG11 H N N 282 VAL HG12 H N N 283 VAL HG13 H N N 284 VAL HG21 H N N 285 VAL HG22 H N N 286 VAL HG23 H N N 287 VAL HXT H N N 288 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 CYS N CA sing N N 55 CYS N H sing N N 56 CYS N H2 sing N N 57 CYS CA C sing N N 58 CYS CA CB sing N N 59 CYS CA HA sing N N 60 CYS C O doub N N 61 CYS C OXT sing N N 62 CYS CB SG sing N N 63 CYS CB HB2 sing N N 64 CYS CB HB3 sing N N 65 CYS SG HG sing N N 66 CYS OXT HXT sing N N 67 GLN N CA sing N N 68 GLN N H sing N N 69 GLN N H2 sing N N 70 GLN CA C sing N N 71 GLN CA CB sing N N 72 GLN CA HA sing N N 73 GLN C O doub N N 74 GLN C OXT sing N N 75 GLN CB CG sing N N 76 GLN CB HB2 sing N N 77 GLN CB HB3 sing N N 78 GLN CG CD sing N N 79 GLN CG HG2 sing N N 80 GLN CG HG3 sing N N 81 GLN CD OE1 doub N N 82 GLN CD NE2 sing N N 83 GLN NE2 HE21 sing N N 84 GLN NE2 HE22 sing N N 85 GLN OXT HXT sing N N 86 GLY N CA sing N N 87 GLY N H sing N N 88 GLY N H2 sing N N 89 GLY CA C sing N N 90 GLY CA HA2 sing N N 91 GLY CA HA3 sing N N 92 GLY C O doub N N 93 GLY C OXT sing N N 94 GLY OXT HXT sing N N 95 HIS N CA sing N N 96 HIS N H sing N N 97 HIS N H2 sing N N 98 HIS CA C sing N N 99 HIS CA CB sing N N 100 HIS CA HA sing N N 101 HIS C O doub N N 102 HIS C OXT sing N N 103 HIS CB CG sing N N 104 HIS CB HB2 sing N N 105 HIS CB HB3 sing N N 106 HIS CG ND1 sing Y N 107 HIS CG CD2 doub Y N 108 HIS ND1 CE1 doub Y N 109 HIS ND1 HD1 sing N N 110 HIS CD2 NE2 sing Y N 111 HIS CD2 HD2 sing N N 112 HIS CE1 NE2 sing Y N 113 HIS CE1 HE1 sing N N 114 HIS NE2 HE2 sing N N 115 HIS OXT HXT sing N N 116 ILE N CA sing N N 117 ILE N H sing N N 118 ILE N H2 sing N N 119 ILE CA C sing N N 120 ILE CA CB sing N N 121 ILE CA HA sing N N 122 ILE C O doub N N 123 ILE C OXT sing N N 124 ILE CB CG1 sing N N 125 ILE CB CG2 sing N N 126 ILE CB HB sing N N 127 ILE CG1 CD1 sing N N 128 ILE CG1 HG12 sing N N 129 ILE CG1 HG13 sing N N 130 ILE CG2 HG21 sing N N 131 ILE CG2 HG22 sing N N 132 ILE CG2 HG23 sing N N 133 ILE CD1 HD11 sing N N 134 ILE CD1 HD12 sing N N 135 ILE CD1 HD13 sing N N 136 ILE OXT HXT sing N N 137 LEU N CA sing N N 138 LEU N H sing N N 139 LEU N H2 sing N N 140 LEU CA C sing N N 141 LEU CA CB sing N N 142 LEU CA HA sing N N 143 LEU C O doub N N 144 LEU C OXT sing N N 145 LEU CB CG sing N N 146 LEU CB HB2 sing N N 147 LEU CB HB3 sing N N 148 LEU CG CD1 sing N N 149 LEU CG CD2 sing N N 150 LEU CG HG sing N N 151 LEU CD1 HD11 sing N N 152 LEU CD1 HD12 sing N N 153 LEU CD1 HD13 sing N N 154 LEU CD2 HD21 sing N N 155 LEU CD2 HD22 sing N N 156 LEU CD2 HD23 sing N N 157 LEU OXT HXT sing N N 158 LYS N CA sing N N 159 LYS N H sing N N 160 LYS N H2 sing N N 161 LYS CA C sing N N 162 LYS CA CB sing N N 163 LYS CA HA sing N N 164 LYS C O doub N N 165 LYS C OXT sing N N 166 LYS CB CG sing N N 167 LYS CB HB2 sing N N 168 LYS CB HB3 sing N N 169 LYS CG CD sing N N 170 LYS CG HG2 sing N N 171 LYS CG HG3 sing N N 172 LYS CD CE sing N N 173 LYS CD HD2 sing N N 174 LYS CD HD3 sing N N 175 LYS CE NZ sing N N 176 LYS CE HE2 sing N N 177 LYS CE HE3 sing N N 178 LYS NZ HZ1 sing N N 179 LYS NZ HZ2 sing N N 180 LYS NZ HZ3 sing N N 181 LYS OXT HXT sing N N 182 PHE N CA sing N N 183 PHE N H sing N N 184 PHE N H2 sing N N 185 PHE CA C sing N N 186 PHE CA CB sing N N 187 PHE CA HA sing N N 188 PHE C O doub N N 189 PHE C OXT sing N N 190 PHE CB CG sing N N 191 PHE CB HB2 sing N N 192 PHE CB HB3 sing N N 193 PHE CG CD1 doub Y N 194 PHE CG CD2 sing Y N 195 PHE CD1 CE1 sing Y N 196 PHE CD1 HD1 sing N N 197 PHE CD2 CE2 doub Y N 198 PHE CD2 HD2 sing N N 199 PHE CE1 CZ doub Y N 200 PHE CE1 HE1 sing N N 201 PHE CE2 CZ sing Y N 202 PHE CE2 HE2 sing N N 203 PHE CZ HZ sing N N 204 PHE OXT HXT sing N N 205 SER N CA sing N N 206 SER N H sing N N 207 SER N H2 sing N N 208 SER CA C sing N N 209 SER CA CB sing N N 210 SER CA HA sing N N 211 SER C O doub N N 212 SER C OXT sing N N 213 SER CB OG sing N N 214 SER CB HB2 sing N N 215 SER CB HB3 sing N N 216 SER OG HG sing N N 217 SER OXT HXT sing N N 218 THR N CA sing N N 219 THR N H sing N N 220 THR N H2 sing N N 221 THR CA C sing N N 222 THR CA CB sing N N 223 THR CA HA sing N N 224 THR C O doub N N 225 THR C OXT sing N N 226 THR CB OG1 sing N N 227 THR CB CG2 sing N N 228 THR CB HB sing N N 229 THR OG1 HG1 sing N N 230 THR CG2 HG21 sing N N 231 THR CG2 HG22 sing N N 232 THR CG2 HG23 sing N N 233 THR OXT HXT sing N N 234 TYR N CA sing N N 235 TYR N H sing N N 236 TYR N H2 sing N N 237 TYR CA C sing N N 238 TYR CA CB sing N N 239 TYR CA HA sing N N 240 TYR C O doub N N 241 TYR C OXT sing N N 242 TYR CB CG sing N N 243 TYR CB HB2 sing N N 244 TYR CB HB3 sing N N 245 TYR CG CD1 doub Y N 246 TYR CG CD2 sing Y N 247 TYR CD1 CE1 sing Y N 248 TYR CD1 HD1 sing N N 249 TYR CD2 CE2 doub Y N 250 TYR CD2 HD2 sing N N 251 TYR CE1 CZ doub Y N 252 TYR CE1 HE1 sing N N 253 TYR CE2 CZ sing Y N 254 TYR CE2 HE2 sing N N 255 TYR CZ OH sing N N 256 TYR OH HH sing N N 257 TYR OXT HXT sing N N 258 VAL N CA sing N N 259 VAL N H sing N N 260 VAL N H2 sing N N 261 VAL CA C sing N N 262 VAL CA CB sing N N 263 VAL CA HA sing N N 264 VAL C O doub N N 265 VAL C OXT sing N N 266 VAL CB CG1 sing N N 267 VAL CB CG2 sing N N 268 VAL CB HB sing N N 269 VAL CG1 HG11 sing N N 270 VAL CG1 HG12 sing N N 271 VAL CG1 HG13 sing N N 272 VAL CG2 HG21 sing N N 273 VAL CG2 HG22 sing N N 274 VAL CG2 HG23 sing N N 275 VAL OXT HXT sing N N 276 # _em_admin.current_status REL _em_admin.deposition_date 2025-04-21 _em_admin.deposition_site PDBJ _em_admin.entry_id 9ULZ _em_admin.last_update 2026-01-14 _em_admin.map_release_date 2026-01-14 _em_admin.title 'Cryo-EM structure of hIAPP fibrils extracted from a donor with T2D and pancreatic cancer' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C2 _em_helical_entity.angular_rotation_per_subunit -1.95 _em_helical_entity.axial_rise_per_subunit 4.75 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? ? OTHER ? 8 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? CLASSIFICATION ? 11 1 ? ? ? ? ? RECONSTRUCTION ? 12 1 ? ? ? ? ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX 1.20.1_4487: ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9ULZ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #