HEADER HYDROLASE 21-APR-25 9UM7 TITLE CAPETASEM9 SEC LOOP OF 12CL VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CUTINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: CAPETASEM9 SEC LOOP OF 12CL VARIANT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORANGIUM AURANTIACUM; SOURCE 3 ORGANISM_TAXID: 134849; SOURCE 4 GENE: SAMN05443668_101498; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PETASE, CRYPTOSPORANGIUM, AURANTIACUM, CAPETASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.KIM,D.KI,J.PARK REVDAT 1 29-APR-26 9UM7 0 JRNL AUTH K.KIM,D.KI,J.PARK JRNL TITL MODULATION OF A NON-CATALYTIC LOOP ENHANCES PRODUCTIVE JRNL TITL 2 ACCESS AND PET DEPOLYMERIZATION ACTIVITY IN CAPETASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 152778 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 8084 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.26 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.30 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6654 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 56.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.3840 REMARK 3 BIN FREE R VALUE SET COUNT : 372 REMARK 3 BIN FREE R VALUE : 0.3890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3999 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.19000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : -0.63000 REMARK 3 B12 (A**2) : 0.10000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.039 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.041 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.030 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.739 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4123 ; 0.014 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3747 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5627 ; 2.058 ; 1.787 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8608 ; 0.700 ; 1.741 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 522 ; 7.580 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 30 ; 9.173 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 587 ;11.252 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 608 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5032 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1012 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2094 ; 1.601 ; 1.647 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2094 ; 1.592 ; 1.647 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2614 ; 2.329 ; 2.952 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2615 ; 2.330 ; 2.954 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2029 ; 3.204 ; 1.923 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2030 ; 3.203 ; 1.923 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3014 ; 4.549 ; 3.382 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4747 ; 5.497 ;18.650 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4683 ; 5.416 ;17.570 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9UM7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-25. REMARK 100 THE DEPOSITION ID IS D_1300058238. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-AUG-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 163278 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.260 REMARK 200 RESOLUTION RANGE LOW (A) : 175.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.78800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7YME REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% (W/V) PEG 3350, 4% (V/V) TACSIMATE REMARK 280 PH 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.87567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 233.75133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 175.31350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 292.18917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.43783 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 116.87567 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 233.75133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 292.18917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 175.31350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 58.43783 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 41 REMARK 465 ALA A 42 REMARK 465 ALA B 41 REMARK 465 ALA B 42 REMARK 465 GLU B 303 REMARK 465 HIS B 304 REMARK 465 HIS B 305 REMARK 465 HIS B 306 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 628 O HOH A 628 12565 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 56 CA SER A 56 CB 0.097 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 137 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG A 137 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 CYS A 180 CB - CA - C ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG A 182 CD - NE - CZ ANGL. DEV. = 10.5 DEGREES REMARK 500 ARG A 182 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 182 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 LYS A 186 CD - CE - NZ ANGL. DEV. = 17.1 DEGREES REMARK 500 ARG A 266 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 137 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG B 177 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG B 266 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG B 266 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 99 -174.23 -68.30 REMARK 500 ILE A 102 57.57 30.25 REMARK 500 SER A 169 -126.41 60.60 REMARK 500 ALA A 218 60.96 -119.86 REMARK 500 HIS A 223 -91.59 -126.93 REMARK 500 PHE A 301 38.27 70.88 REMARK 500 SER B 169 -129.26 63.13 REMARK 500 HIS B 223 -90.37 -127.86 REMARK 500 PHE B 301 60.58 76.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 99 GLY A 100 -99.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 182 0.10 SIDE CHAIN REMARK 500 ARG B 155 0.07 SIDE CHAIN REMARK 500 ARG B 182 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO A 99 -12.85 REMARK 500 REMARK 500 REMARK: NULL DBREF1 9UM7 A 41 301 UNP A0A1M7II12_9ACTN DBREF2 9UM7 A A0A1M7II12 41 299 DBREF1 9UM7 B 41 301 UNP A0A1M7II12_9ACTN DBREF2 9UM7 B A0A1M7II12 41 299 SEQADV 9UM7 ALA A 109 UNP A0A1M7II1 ASN 109 ENGINEERED MUTATION SEQADV 9UM7 THR A 129 UNP A0A1M7II1 VAL 129 ENGINEERED MUTATION SEQADV 9UM7 ARG A 155 UNP A0A1M7II1 ALA 155 ENGINEERED MUTATION SEQADV 9UM7 CYS A 180 UNP A0A1M7II1 LEU 180 ENGINEERED MUTATION SEQADV 9UM7 THR A 196 UNP A0A1M7II1 GLY 196 ENGINEERED MUTATION SEQADV 9UM7 LYS A 198 UNP A0A1M7II1 ARG 198 ENGINEERED MUTATION SEQADV 9UM7 CYS A 202 UNP A0A1M7II1 ALA 202 ENGINEERED MUTATION SEQADV 9UM7 CYS A 242 UNP A0A1M7II1 ARG 242 ENGINEERED MUTATION SEQADV 9UM7 GLY A 280 UNP A0A1M7II1 INSERTION SEQADV 9UM7 ALA A 281 UNP A0A1M7II1 PRO 280 ENGINEERED MUTATION SEQADV 9UM7 GLU A 282 UNP A0A1M7II1 GLY 281 ENGINEERED MUTATION SEQADV 9UM7 HIS A 283 UNP A0A1M7II1 PRO 282 ENGINEERED MUTATION SEQADV 9UM7 GLN A 284 UNP A0A1M7II1 SER 283 ENGINEERED MUTATION SEQADV 9UM7 ALA A 285 UNP A0A1M7II1 THR 284 ENGINEERED MUTATION SEQADV 9UM7 ASP A 286 UNP A0A1M7II1 GLY 285 ENGINEERED MUTATION SEQADV 9UM7 SER A 288 UNP A0A1M7II1 INSERTION SEQADV 9UM7 LYS A 289 UNP A0A1M7II1 PHE 287 ENGINEERED MUTATION SEQADV 9UM7 ARG A 290 UNP A0A1M7II1 ALA 288 ENGINEERED MUTATION SEQADV 9UM7 ALA A 291 UNP A0A1M7II1 PRO 289 ENGINEERED MUTATION SEQADV 9UM7 CYS A 293 UNP A0A1M7II1 SER 291 ENGINEERED MUTATION SEQADV 9UM7 LEU A 302 UNP A0A1M7II1 EXPRESSION TAG SEQADV 9UM7 GLU A 303 UNP A0A1M7II1 EXPRESSION TAG SEQADV 9UM7 HIS A 304 UNP A0A1M7II1 EXPRESSION TAG SEQADV 9UM7 HIS A 305 UNP A0A1M7II1 EXPRESSION TAG SEQADV 9UM7 HIS A 306 UNP A0A1M7II1 EXPRESSION TAG SEQADV 9UM7 ALA B 109 UNP A0A1M7II1 ASN 109 ENGINEERED MUTATION SEQADV 9UM7 THR B 129 UNP A0A1M7II1 VAL 129 ENGINEERED MUTATION SEQADV 9UM7 ARG B 155 UNP A0A1M7II1 ALA 155 ENGINEERED MUTATION SEQADV 9UM7 CYS B 180 UNP A0A1M7II1 LEU 180 ENGINEERED MUTATION SEQADV 9UM7 THR B 196 UNP A0A1M7II1 GLY 196 ENGINEERED MUTATION SEQADV 9UM7 LYS B 198 UNP A0A1M7II1 ARG 198 ENGINEERED MUTATION SEQADV 9UM7 CYS B 202 UNP A0A1M7II1 ALA 202 ENGINEERED MUTATION SEQADV 9UM7 CYS B 242 UNP A0A1M7II1 ARG 242 ENGINEERED MUTATION SEQADV 9UM7 GLY B 280 UNP A0A1M7II1 INSERTION SEQADV 9UM7 ALA B 281 UNP A0A1M7II1 PRO 280 ENGINEERED MUTATION SEQADV 9UM7 GLU B 282 UNP A0A1M7II1 GLY 281 ENGINEERED MUTATION SEQADV 9UM7 HIS B 283 UNP A0A1M7II1 PRO 282 ENGINEERED MUTATION SEQADV 9UM7 GLN B 284 UNP A0A1M7II1 SER 283 ENGINEERED MUTATION SEQADV 9UM7 ALA B 285 UNP A0A1M7II1 THR 284 ENGINEERED MUTATION SEQADV 9UM7 ASP B 286 UNP A0A1M7II1 GLY 285 ENGINEERED MUTATION SEQADV 9UM7 SER B 288 UNP A0A1M7II1 INSERTION SEQADV 9UM7 LYS B 289 UNP A0A1M7II1 PHE 287 ENGINEERED MUTATION SEQADV 9UM7 ARG B 290 UNP A0A1M7II1 ALA 288 ENGINEERED MUTATION SEQADV 9UM7 ALA B 291 UNP A0A1M7II1 PRO 289 ENGINEERED MUTATION SEQADV 9UM7 CYS B 293 UNP A0A1M7II1 SER 291 ENGINEERED MUTATION SEQADV 9UM7 LEU B 302 UNP A0A1M7II1 EXPRESSION TAG SEQADV 9UM7 GLU B 303 UNP A0A1M7II1 EXPRESSION TAG SEQADV 9UM7 HIS B 304 UNP A0A1M7II1 EXPRESSION TAG SEQADV 9UM7 HIS B 305 UNP A0A1M7II1 EXPRESSION TAG SEQADV 9UM7 HIS B 306 UNP A0A1M7II1 EXPRESSION TAG SEQRES 1 A 266 ALA ALA ASP ASN PRO TYR GLN ARG GLY PRO ASP PRO THR SEQRES 2 A 266 ASN ALA SER ILE GLU ALA ALA THR GLY PRO PHE ALA VAL SEQRES 3 A 266 GLY THR GLN PRO ILE VAL GLY ALA SER GLY PHE GLY GLY SEQRES 4 A 266 GLY GLN ILE TYR TYR PRO THR ASP THR SER GLN THR TYR SEQRES 5 A 266 GLY ALA VAL VAL ILE VAL PRO GLY PHE ILE SER VAL TRP SEQRES 6 A 266 ALA GLN LEU ALA TRP LEU GLY PRO ARG LEU ALA SER GLN SEQRES 7 A 266 GLY PHE VAL VAL ILE GLY ILE GLU THR SER THR ILE THR SEQRES 8 A 266 ASP LEU PRO ASP PRO ARG GLY ASP GLN ALA LEU ALA ALA SEQRES 9 A 266 LEU ASP TRP ALA THR THR ARG SER PRO VAL ARG SER ARG SEQRES 10 A 266 ILE ASP ARG THR ARG LEU ALA ALA ALA GLY TRP SER MET SEQRES 11 A 266 GLY GLY GLY GLY LEU ARG ARG ALA ALA CYS GLN ARG PRO SEQRES 12 A 266 SER LEU LYS ALA ILE VAL GLY MET ALA PRO TRP ASN THR SEQRES 13 A 266 GLU LYS ASN TRP SER CYS VAL THR VAL PRO THR LEU PHE SEQRES 14 A 266 PHE GLY GLY SER SER ASP ALA VAL ALA SER PRO ASN ASP SEQRES 15 A 266 HIS ALA LYS PRO PHE TYR ASN SER ILE THR ARG ALA GLU SEQRES 16 A 266 LYS ASP TYR ILE GLU LEU CYS ASN ALA ASP HIS PHE PHE SEQRES 17 A 266 PRO THR SER ALA ASN THR THR MET ALA LYS TYR PHE ILE SEQRES 18 A 266 SER TRP LEU LYS ARG TRP VAL ASP ASN ASP THR ARG TYR SEQRES 19 A 266 THR GLN PHE LEU CYS GLY ALA GLU HIS GLN ALA ASP LEU SEQRES 20 A 266 SER LYS ARG ALA VAL CYS ALA SER MET ASN THR CYS PRO SEQRES 21 A 266 PHE LEU GLU HIS HIS HIS SEQRES 1 B 266 ALA ALA ASP ASN PRO TYR GLN ARG GLY PRO ASP PRO THR SEQRES 2 B 266 ASN ALA SER ILE GLU ALA ALA THR GLY PRO PHE ALA VAL SEQRES 3 B 266 GLY THR GLN PRO ILE VAL GLY ALA SER GLY PHE GLY GLY SEQRES 4 B 266 GLY GLN ILE TYR TYR PRO THR ASP THR SER GLN THR TYR SEQRES 5 B 266 GLY ALA VAL VAL ILE VAL PRO GLY PHE ILE SER VAL TRP SEQRES 6 B 266 ALA GLN LEU ALA TRP LEU GLY PRO ARG LEU ALA SER GLN SEQRES 7 B 266 GLY PHE VAL VAL ILE GLY ILE GLU THR SER THR ILE THR SEQRES 8 B 266 ASP LEU PRO ASP PRO ARG GLY ASP GLN ALA LEU ALA ALA SEQRES 9 B 266 LEU ASP TRP ALA THR THR ARG SER PRO VAL ARG SER ARG SEQRES 10 B 266 ILE ASP ARG THR ARG LEU ALA ALA ALA GLY TRP SER MET SEQRES 11 B 266 GLY GLY GLY GLY LEU ARG ARG ALA ALA CYS GLN ARG PRO SEQRES 12 B 266 SER LEU LYS ALA ILE VAL GLY MET ALA PRO TRP ASN THR SEQRES 13 B 266 GLU LYS ASN TRP SER CYS VAL THR VAL PRO THR LEU PHE SEQRES 14 B 266 PHE GLY GLY SER SER ASP ALA VAL ALA SER PRO ASN ASP SEQRES 15 B 266 HIS ALA LYS PRO PHE TYR ASN SER ILE THR ARG ALA GLU SEQRES 16 B 266 LYS ASP TYR ILE GLU LEU CYS ASN ALA ASP HIS PHE PHE SEQRES 17 B 266 PRO THR SER ALA ASN THR THR MET ALA LYS TYR PHE ILE SEQRES 18 B 266 SER TRP LEU LYS ARG TRP VAL ASP ASN ASP THR ARG TYR SEQRES 19 B 266 THR GLN PHE LEU CYS GLY ALA GLU HIS GLN ALA ASP LEU SEQRES 20 B 266 SER LYS ARG ALA VAL CYS ALA SER MET ASN THR CYS PRO SEQRES 21 B 266 PHE LEU GLU HIS HIS HIS HET EDO A 401 10 HET EDO A 402 4 HET EDO B 401 4 HET EDO B 402 4 HET EDO B 403 10 HET EDO B 404 10 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 6(C2 H6 O2) FORMUL 9 HOH *360(H2 O) HELIX 1 AA1 THR A 53 ALA A 59 1 7 HELIX 2 AA2 VAL A 104 ALA A 109 5 6 HELIX 3 AA3 TRP A 110 SER A 117 1 8 HELIX 4 AA4 LEU A 133 ARG A 151 1 19 HELIX 5 AA5 VAL A 154 SER A 156 5 3 HELIX 6 AA6 SER A 169 GLY A 174 1 6 HELIX 7 AA7 GLY A 174 ARG A 182 1 9 HELIX 8 AA8 HIS A 223 ILE A 231 1 9 HELIX 9 AA9 PHE A 247 SER A 251 5 5 HELIX 10 AB1 ASN A 253 ASP A 269 1 17 HELIX 11 AB2 ASP A 271 ARG A 273 5 3 HELIX 12 AB3 TYR A 274 GLY A 280 1 7 HELIX 13 AB4 GLY A 280 LYS A 289 1 10 HELIX 14 AB5 THR B 53 ALA B 59 1 7 HELIX 15 AB6 VAL B 104 ALA B 109 5 6 HELIX 16 AB7 TRP B 110 SER B 117 1 8 HELIX 17 AB8 LEU B 133 ARG B 151 1 19 HELIX 18 AB9 VAL B 154 SER B 156 5 3 HELIX 19 AC1 SER B 169 GLY B 174 1 6 HELIX 20 AC2 GLY B 174 ARG B 182 1 9 HELIX 21 AC3 HIS B 223 ILE B 231 1 9 HELIX 22 AC4 PHE B 247 SER B 251 5 5 HELIX 23 AC5 ASN B 253 ASP B 269 1 17 HELIX 24 AC6 ASP B 271 ARG B 273 5 3 HELIX 25 AC7 TYR B 274 GLY B 280 1 7 HELIX 26 AC8 GLY B 280 LYS B 289 1 10 SHEET 1 AA1 9 VAL A 66 PRO A 70 0 SHEET 2 AA1 9 GLY A 80 PRO A 85 -1 O TYR A 84 N GLY A 67 SHEET 3 AA1 9 VAL A 121 ILE A 125 -1 O VAL A 122 N TYR A 83 SHEET 4 AA1 9 TYR A 92 VAL A 98 1 N VAL A 95 O ILE A 123 SHEET 5 AA1 9 ILE A 158 TRP A 168 1 O ASP A 159 N TYR A 92 SHEET 6 AA1 9 ALA A 187 MET A 191 1 O MET A 191 N GLY A 167 SHEET 7 AA1 9 THR A 207 GLY A 212 1 O PHE A 210 N GLY A 190 SHEET 8 AA1 9 LYS A 236 LEU A 241 1 O LEU A 241 N GLY A 211 SHEET 9 AA1 9 VAL A 292 ASN A 297 -1 O MET A 296 N TYR A 238 SHEET 1 AA2 9 VAL B 66 PRO B 70 0 SHEET 2 AA2 9 GLY B 80 PRO B 85 -1 O TYR B 84 N GLY B 67 SHEET 3 AA2 9 VAL B 121 ILE B 125 -1 O VAL B 122 N TYR B 83 SHEET 4 AA2 9 TYR B 92 VAL B 98 1 N VAL B 95 O ILE B 123 SHEET 5 AA2 9 ILE B 158 TRP B 168 1 O ASP B 159 N TYR B 92 SHEET 6 AA2 9 ALA B 187 MET B 191 1 O MET B 191 N GLY B 167 SHEET 7 AA2 9 THR B 207 GLY B 212 1 O LEU B 208 N GLY B 190 SHEET 8 AA2 9 LYS B 236 LEU B 241 1 O LEU B 241 N GLY B 211 SHEET 9 AA2 9 ALA B 294 ASN B 297 -1 O MET B 296 N TYR B 238 SSBOND 1 CYS A 180 CYS A 202 1555 1555 2.12 SSBOND 2 CYS A 242 CYS A 293 1555 1555 2.31 SSBOND 3 CYS A 279 CYS A 299 1555 1555 2.06 SSBOND 4 CYS B 180 CYS B 202 1555 1555 1.98 SSBOND 5 CYS B 242 CYS B 293 1555 1555 2.18 SSBOND 6 CYS B 279 CYS B 299 1555 1555 2.07 CISPEP 1 CYS A 299 PRO A 300 0 5.73 CISPEP 2 CYS B 299 PRO B 300 0 5.37 CRYST1 77.952 77.952 350.627 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012828 0.007406 0.000000 0.00000 SCALE2 0.000000 0.014813 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002852 0.00000 CONECT 1013 1188 CONECT 1188 1013 CONECT 1495 1914 CONECT 1812 1954 CONECT 1914 1495 CONECT 1954 1812 CONECT 3033 3208 CONECT 3208 3033 CONECT 3515 3934 CONECT 3832 3974 CONECT 3934 3515 CONECT 3974 3832 CONECT 4002 4003 4004 4006 4007 CONECT 4003 4002 4008 CONECT 4004 4002 4005 4009 4010 CONECT 4005 4004 4011 CONECT 4006 4002 CONECT 4007 4002 CONECT 4008 4003 CONECT 4009 4004 CONECT 4010 4004 CONECT 4011 4005 CONECT 4012 4013 4014 CONECT 4013 4012 CONECT 4014 4012 4015 CONECT 4015 4014 CONECT 4016 4017 4018 CONECT 4017 4016 CONECT 4018 4016 4019 CONECT 4019 4018 CONECT 4020 4021 4022 CONECT 4021 4020 CONECT 4022 4020 4023 CONECT 4023 4022 CONECT 4024 4025 4026 4028 4029 CONECT 4025 4024 4030 CONECT 4026 4024 4027 4031 4032 CONECT 4027 4026 4033 CONECT 4028 4024 CONECT 4029 4024 CONECT 4030 4025 CONECT 4031 4026 CONECT 4032 4026 CONECT 4033 4027 CONECT 4034 4035 4036 4038 4039 CONECT 4035 4034 4040 CONECT 4036 4034 4037 4041 4042 CONECT 4037 4036 4043 CONECT 4038 4034 CONECT 4039 4034 CONECT 4040 4035 CONECT 4041 4036 CONECT 4042 4036 CONECT 4043 4037 MASTER 428 0 6 26 18 0 0 6 4383 2 54 42 END