HEADER TRANSFERASE 06-MAY-25 9UUB TITLE 8XMT MUTANT OF STILBENE SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: STILBENE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CENCHRUS AMERICANUS; SOURCE 3 ORGANISM_TAXID: 4543; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS STILBENE SYNTHASE, STS, TYPE III POLYKETIDE SYNTHASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.C.POW,C.J.KHOO,Q.HAO REVDAT 1 27-MAY-26 9UUB 0 JRNL AUTH K.C.POW,C.J.KHOO,Q.HAO JRNL TITL 8XMT MUTANT OF STILBENE SYNTHASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 244738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2570 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.41 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 17675 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.4220 REMARK 3 BIN FREE R VALUE SET COUNT : 187 REMARK 3 BIN FREE R VALUE : 0.4060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6018 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 114 REMARK 3 SOLVENT ATOMS : 784 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08900 REMARK 3 B22 (A**2) : 0.09700 REMARK 3 B33 (A**2) : -0.00800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.041 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.041 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.974 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6633 ; 0.013 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 6368 ; 0.000 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9065 ; 2.108 ; 1.831 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14675 ; 0.670 ; 1.752 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 883 ; 6.184 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 53 ; 7.836 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1153 ;13.336 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1030 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7969 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1489 ; 0.020 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1264 ; 0.219 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 108 ; 0.275 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3177 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 567 ; 0.165 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3305 ; 1.819 ; 1.855 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3305 ; 1.799 ; 1.855 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4175 ; 2.525 ; 3.326 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4176 ; 2.526 ; 3.327 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3328 ; 3.872 ; 2.343 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3329 ; 3.871 ; 2.345 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4860 ; 5.792 ; 4.127 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4861 ; 5.791 ; 4.129 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9UUB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 08-MAY-25. REMARK 100 THE DEPOSITION ID IS D_1300058608. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 244738 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.410 REMARK 200 RESOLUTION RANGE LOW (A) : 47.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.47 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 13.62 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.25 M SODIUM CITRATE TRIBASIC, 0.1 M REMARK 280 HEPES PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.32000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 68.69500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 89.14000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.32000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 68.69500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.14000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 52.32000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 68.69500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 89.14000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 52.32000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 68.69500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 89.14000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 886 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 682 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 756 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 858 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -6 REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 LYS A -3 REMARK 465 LEU A -2 REMARK 465 LEU A -1 REMARK 465 GLN A 0 REMARK 465 MET A 1 REMARK 465 THR A 394 REMARK 465 ALA A 395 REMARK 465 GLY B -6 REMARK 465 GLY B -5 REMARK 465 SER B -4 REMARK 465 LYS B -3 REMARK 465 LEU B -2 REMARK 465 LEU B -1 REMARK 465 GLN B 0 REMARK 465 MET B 1 REMARK 465 THR B 394 REMARK 465 ALA B 395 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 283 O HOH B 501 2.06 REMARK 500 O HOH A 897 O HOH A 905 2.15 REMARK 500 O HOH A 529 O HOH A 745 2.16 REMARK 500 O HOH A 526 O HOH A 593 2.16 REMARK 500 OG SER B 49 O HOH B 502 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 15 CZ ARG A 15 NH2 0.095 REMARK 500 ARG A 328 CZ ARG A 328 NH2 0.080 REMARK 500 ARG B 15 CZ ARG B 15 NH2 0.103 REMARK 500 SER B 136 CA SER B 136 CB 0.097 REMARK 500 GLU B 276 CD GLU B 276 OE1 0.085 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 15 NH1 - CZ - NH2 ANGL. DEV. = 9.6 DEGREES REMARK 500 ARG A 15 NE - CZ - NH1 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG A 15 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 MET A 34 CG - SD - CE ANGL. DEV. = -9.6 DEGREES REMARK 500 ARG A 71 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 124 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 124 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 MET A 140 CG - SD - CE ANGL. DEV. = -17.4 DEGREES REMARK 500 ARG A 159 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 202 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 328 NH1 - CZ - NH2 ANGL. DEV. = 7.6 DEGREES REMARK 500 ARG A 328 NE - CZ - NH1 ANGL. DEV. = -7.5 DEGREES REMARK 500 ARG A 331 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 353 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG B 15 NH1 - CZ - NH2 ANGL. DEV. = 8.1 DEGREES REMARK 500 ARG B 15 NE - CZ - NH1 ANGL. DEV. = -6.6 DEGREES REMARK 500 ARG B 71 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 97 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 MET B 140 CG - SD - CE ANGL. DEV. = -22.1 DEGREES REMARK 500 ARG B 237 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 93 4.87 -158.72 REMARK 500 ASP A 230 60.81 60.21 REMARK 500 MET A 340 30.24 -91.46 REMARK 500 SER A 341 -127.54 53.50 REMARK 500 SER A 341 -128.15 54.61 REMARK 500 SER B 93 5.08 -160.96 REMARK 500 ASN B 252 59.87 38.13 REMARK 500 TYR B 337 -13.18 -140.61 REMARK 500 SER B 341 -131.98 57.62 REMARK 500 SER B 341 -132.62 58.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLN A 164 0.07 SIDE CHAIN REMARK 500 ARG A 185 0.12 SIDE CHAIN REMARK 500 ARG B 185 0.10 SIDE CHAIN REMARK 500 ARG B 237 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 874 DISTANCE = 6.02 ANGSTROMS DBREF 9UUB A -6 395 PDB 9UUB 9UUB -6 395 DBREF 9UUB B -6 395 PDB 9UUB 9UUB -6 395 SEQRES 1 A 402 GLY GLY SER LYS LEU LEU GLN MET ALA ALA ASN VAL THR SEQRES 2 A 402 VAL GLU GLU VAL ARG LYS ALA GLN ARG ALA GLU GLY PRO SEQRES 3 A 402 ALA THR VAL LEU ALA ILE GLY THR THR THR PRO PRO ASN SEQRES 4 A 402 CYS MET TYR GLN ALA ASP TYR ALA ASP TYR TYR PHE ARG SEQRES 5 A 402 VAL THR LYS SER GLU HIS MET THR GLU LEU LYS GLU LYS SEQRES 6 A 402 PHE LYS ARG ILE CYS HIS LYS SER MET ILE GLN LYS ARG SEQRES 7 A 402 TYR LEU HIS LEU THR GLU ASP ILE LEU LEU GLU ASN PRO SEQRES 8 A 402 ASN MET ALA SER TYR SER ALA PRO SER LEU ASN ALA ARG SEQRES 9 A 402 GLN ASP ILE VAL VAL VAL GLU VAL PRO LYS MET GLY ALA SEQRES 10 A 402 VAL ALA ALA GLU LYS ALA LEU LYS GLU TRP GLY GLN PRO SEQRES 11 A 402 ARG SER GLN ILE THR HIS ILE ILE PHE CYS THR THR SER SEQRES 12 A 402 GLY VAL ASP MET PRO GLY ALA ASP SER ARG THR ILE LYS SEQRES 13 A 402 LEU LEU GLY LEU ASN PRO SER VAL LYS ARG LEU MET MET SEQRES 14 A 402 TYR GLN GLN GLY CYS PHE ALA GLY GLY THR VAL LEU ARG SEQRES 15 A 402 VAL ALA LYS ASP LEU ALA GLU ASN ASN ARG GLY ALA ARG SEQRES 16 A 402 VAL LEU ILE VAL CYS SER GLU ILE THR ALA VAL THR PHE SEQRES 17 A 402 ARG GLY PRO SER GLU ASP HIS LEU ASP SER LEU VAL GLY SEQRES 18 A 402 GLN ALA LEU PHE GLY ASP GLY ALA ALA ALA VAL ILE VAL SEQRES 19 A 402 GLY ALA ASP PRO ASP GLU HIS MET GLU ARG SER LEU PHE SEQRES 20 A 402 GLN MET VAL SER ALA SER GLU THR ILE LEU PRO ASN SER SEQRES 21 A 402 ASP GLY ALA ILE GLU GLY HIS LEU ARG GLU VAL GLY LEU SEQRES 22 A 402 THR PHE HIS LEU GLN GLU ARG VAL PRO GLU LEU ILE SER SEQRES 23 A 402 SER ASN ILE GLU ARG LEU LEU GLU GLU SER PHE LYS PRO SEQRES 24 A 402 LEU GLY ILE SER ASP TRP ASN SER ILE PHE TRP VAL ALA SEQRES 25 A 402 HIS PRO GLY GLY PRO ALA ILE LEU ASN ALA VAL GLU LYS SEQRES 26 A 402 LYS ALA GLY ILE ASP LYS ALA ARG LEU ARG ALA THR ARG SEQRES 27 A 402 GLN VAL LEU SER GLU TYR GLY ASN MET SER SER ALA CYS SEQRES 28 A 402 VAL LEU PHE ILE LEU ASP GLU MET ARG LYS PHE SER ALA SEQRES 29 A 402 GLU ASP GLY ARG THR THR THR GLY GLU GLY MET ASP TRP SEQRES 30 A 402 GLY VAL LEU PHE GLY PHE GLY PRO GLY LEU THR VAL GLU SEQRES 31 A 402 THR ILE VAL LEU HIS SER VAL PRO ILE ALA THR ALA SEQRES 1 B 402 GLY GLY SER LYS LEU LEU GLN MET ALA ALA ASN VAL THR SEQRES 2 B 402 VAL GLU GLU VAL ARG LYS ALA GLN ARG ALA GLU GLY PRO SEQRES 3 B 402 ALA THR VAL LEU ALA ILE GLY THR THR THR PRO PRO ASN SEQRES 4 B 402 CYS MET TYR GLN ALA ASP TYR ALA ASP TYR TYR PHE ARG SEQRES 5 B 402 VAL THR LYS SER GLU HIS MET THR GLU LEU LYS GLU LYS SEQRES 6 B 402 PHE LYS ARG ILE CYS HIS LYS SER MET ILE GLN LYS ARG SEQRES 7 B 402 TYR LEU HIS LEU THR GLU ASP ILE LEU LEU GLU ASN PRO SEQRES 8 B 402 ASN MET ALA SER TYR SER ALA PRO SER LEU ASN ALA ARG SEQRES 9 B 402 GLN ASP ILE VAL VAL VAL GLU VAL PRO LYS MET GLY ALA SEQRES 10 B 402 VAL ALA ALA GLU LYS ALA LEU LYS GLU TRP GLY GLN PRO SEQRES 11 B 402 ARG SER GLN ILE THR HIS ILE ILE PHE CYS THR THR SER SEQRES 12 B 402 GLY VAL ASP MET PRO GLY ALA ASP SER ARG THR ILE LYS SEQRES 13 B 402 LEU LEU GLY LEU ASN PRO SER VAL LYS ARG LEU MET MET SEQRES 14 B 402 TYR GLN GLN GLY CYS PHE ALA GLY GLY THR VAL LEU ARG SEQRES 15 B 402 VAL ALA LYS ASP LEU ALA GLU ASN ASN ARG GLY ALA ARG SEQRES 16 B 402 VAL LEU ILE VAL CYS SER GLU ILE THR ALA VAL THR PHE SEQRES 17 B 402 ARG GLY PRO SER GLU ASP HIS LEU ASP SER LEU VAL GLY SEQRES 18 B 402 GLN ALA LEU PHE GLY ASP GLY ALA ALA ALA VAL ILE VAL SEQRES 19 B 402 GLY ALA ASP PRO ASP GLU HIS MET GLU ARG SER LEU PHE SEQRES 20 B 402 GLN MET VAL SER ALA SER GLU THR ILE LEU PRO ASN SER SEQRES 21 B 402 ASP GLY ALA ILE GLU GLY HIS LEU ARG GLU VAL GLY LEU SEQRES 22 B 402 THR PHE HIS LEU GLN GLU ARG VAL PRO GLU LEU ILE SER SEQRES 23 B 402 SER ASN ILE GLU ARG LEU LEU GLU GLU SER PHE LYS PRO SEQRES 24 B 402 LEU GLY ILE SER ASP TRP ASN SER ILE PHE TRP VAL ALA SEQRES 25 B 402 HIS PRO GLY GLY PRO ALA ILE LEU ASN ALA VAL GLU LYS SEQRES 26 B 402 LYS ALA GLY ILE ASP LYS ALA ARG LEU ARG ALA THR ARG SEQRES 27 B 402 GLN VAL LEU SER GLU TYR GLY ASN MET SER SER ALA CYS SEQRES 28 B 402 VAL LEU PHE ILE LEU ASP GLU MET ARG LYS PHE SER ALA SEQRES 29 B 402 GLU ASP GLY ARG THR THR THR GLY GLU GLY MET ASP TRP SEQRES 30 B 402 GLY VAL LEU PHE GLY PHE GLY PRO GLY LEU THR VAL GLU SEQRES 31 B 402 THR ILE VAL LEU HIS SER VAL PRO ILE ALA THR ALA HET COA A 401 48 HET COA B 401 48 HET GOL B 402 6 HET GOL B 403 6 HET GOL B 404 6 HETNAM COA COENZYME A HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 COA 2(C21 H36 N7 O16 P3 S) FORMUL 5 GOL 3(C3 H8 O3) FORMUL 8 HOH *784(H2 O) HELIX 1 AA1 THR A 6 ARG A 15 1 10 HELIX 2 AA2 ASP A 38 THR A 47 1 10 HELIX 3 AA3 MET A 52 SER A 66 1 15 HELIX 4 AA4 THR A 76 ASN A 83 1 8 HELIX 5 AA5 PRO A 84 SER A 88 5 5 HELIX 6 AA6 SER A 93 TRP A 120 1 28 HELIX 7 AA7 PRO A 123 ILE A 127 5 5 HELIX 8 AA8 GLY A 142 GLY A 152 1 11 HELIX 9 AA9 PHE A 168 ASN A 184 1 17 HELIX 10 AB1 ILE A 196 THR A 200 5 5 HELIX 11 AB2 HIS A 208 PHE A 218 1 11 HELIX 12 AB3 ARG A 273 LYS A 291 1 19 HELIX 13 AB4 PRO A 292 GLY A 294 5 3 HELIX 14 AB5 ASP A 297 ILE A 301 5 5 HELIX 15 AB6 GLY A 309 GLY A 321 1 13 HELIX 16 AB7 ASP A 323 ARG A 326 5 4 HELIX 17 AB8 LEU A 327 GLY A 338 1 12 HELIX 18 AB9 MET A 340 SER A 342 5 3 HELIX 19 AC1 ALA A 343 GLY A 360 1 18 HELIX 20 AC2 THR B 6 ARG B 15 1 10 HELIX 21 AC3 ASP B 38 THR B 47 1 10 HELIX 22 AC4 MET B 52 SER B 66 1 15 HELIX 23 AC5 THR B 76 ASN B 83 1 8 HELIX 24 AC6 ASN B 83 SER B 88 1 6 HELIX 25 AC7 SER B 93 GLY B 121 1 29 HELIX 26 AC8 PRO B 123 ILE B 127 5 5 HELIX 27 AC9 GLY B 142 GLY B 152 1 11 HELIX 28 AD1 PHE B 168 ASN B 183 1 16 HELIX 29 AD2 ILE B 196 THR B 200 5 5 HELIX 30 AD3 HIS B 208 PHE B 218 1 11 HELIX 31 AD4 ARG B 273 LYS B 291 1 19 HELIX 32 AD5 PRO B 292 GLY B 294 5 3 HELIX 33 AD6 ASP B 297 ILE B 301 5 5 HELIX 34 AD7 GLY B 309 GLY B 321 1 13 HELIX 35 AD8 ASP B 323 ARG B 326 5 4 HELIX 36 AD9 LEU B 327 GLY B 338 1 12 HELIX 37 AE1 MET B 340 SER B 342 5 3 HELIX 38 AE2 ALA B 343 ASP B 359 1 17 SHEET 1 AA1 9 LYS A 158 TYR A 163 0 SHEET 2 AA1 9 HIS A 129 THR A 134 1 N PHE A 132 O MET A 162 SHEET 3 AA1 9 ARG A 188 GLU A 195 1 O LEU A 190 N HIS A 129 SHEET 4 AA1 9 GLY A 221 GLY A 228 -1 O VAL A 225 N ILE A 191 SHEET 5 AA1 9 THR A 21 THR A 28 -1 N LEU A 23 O ILE A 226 SHEET 6 AA1 9 PHE A 240 ILE A 249 -1 O PHE A 240 N VAL A 22 SHEET 7 AA1 9 THR A 381 SER A 389 -1 O HIS A 388 N GLN A 241 SHEET 8 AA1 9 TRP A 370 GLY A 377 -1 N LEU A 373 O ILE A 385 SHEET 9 AA1 9 PHE A 302 ALA A 305 1 N VAL A 304 O VAL A 372 SHEET 1 AA2 2 CYS A 33 TYR A 35 0 SHEET 2 AA2 2 LYS A 70 TYR A 72 -1 O ARG A 71 N MET A 34 SHEET 1 AA3 2 ILE A 257 ARG A 262 0 SHEET 2 AA3 2 GLY A 265 LEU A 270 -1 O GLY A 265 N ARG A 262 SHEET 1 AA4 9 LYS B 158 TYR B 163 0 SHEET 2 AA4 9 HIS B 129 THR B 134 1 N PHE B 132 O MET B 162 SHEET 3 AA4 9 ARG B 188 GLU B 195 1 O VAL B 192 N CYS B 133 SHEET 4 AA4 9 GLY B 221 GLY B 228 -1 O VAL B 227 N VAL B 189 SHEET 5 AA4 9 THR B 21 THR B 28 -1 N LEU B 23 O ILE B 226 SHEET 6 AA4 9 PHE B 240 ILE B 249 -1 O PHE B 240 N VAL B 22 SHEET 7 AA4 9 THR B 381 SER B 389 -1 O VAL B 386 N VAL B 243 SHEET 8 AA4 9 TRP B 370 GLY B 377 -1 N LEU B 373 O ILE B 385 SHEET 9 AA4 9 PHE B 302 ALA B 305 1 N VAL B 304 O PHE B 374 SHEET 1 AA5 2 CYS B 33 TYR B 35 0 SHEET 2 AA5 2 LYS B 70 TYR B 72 -1 O ARG B 71 N MET B 34 SHEET 1 AA6 2 ILE B 257 ARG B 262 0 SHEET 2 AA6 2 GLY B 265 LEU B 270 -1 O THR B 267 N HIS B 260 CISPEP 1 MET A 140 PRO A 141 0 -6.95 CISPEP 2 GLY A 379 LEU A 380 0 4.47 CISPEP 3 MET B 140 PRO B 141 0 -11.23 CISPEP 4 GLY B 379 LEU B 380 0 3.43 CRYST1 104.640 137.390 178.280 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009557 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007279 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005609 0.00000 CONECT 6358 6359 6363 CONECT 6359 6358 6360 CONECT 6360 6359 6361 CONECT 6361 6360 6362 6367 CONECT 6362 6361 6363 6365 CONECT 6363 6358 6362 6364 CONECT 6364 6363 CONECT 6365 6362 6366 CONECT 6366 6365 6367 CONECT 6367 6361 6366 6368 CONECT 6368 6367 6369 6378 CONECT 6369 6368 6370 6371 CONECT 6370 6369 CONECT 6371 6369 6372 6377 CONECT 6372 6371 6373 CONECT 6373 6372 6374 6375 6376 CONECT 6374 6373 CONECT 6375 6373 CONECT 6376 6373 CONECT 6377 6371 6378 6379 CONECT 6378 6368 6377 CONECT 6379 6377 6380 CONECT 6380 6379 6381 CONECT 6381 6380 6382 6383 6384 CONECT 6382 6381 CONECT 6383 6381 CONECT 6384 6381 6385 CONECT 6385 6384 6386 6387 6388 CONECT 6386 6385 CONECT 6387 6385 CONECT 6388 6385 6390 CONECT 6389 6390 6391 6392 6393 CONECT 6390 6388 6389 CONECT 6391 6389 CONECT 6392 6389 CONECT 6393 6389 6394 6395 CONECT 6394 6393 CONECT 6395 6393 6396 6397 CONECT 6396 6395 CONECT 6397 6395 6398 CONECT 6398 6397 6399 CONECT 6399 6398 6400 CONECT 6400 6399 6401 6402 CONECT 6401 6400 CONECT 6402 6400 6403 CONECT 6403 6402 6404 CONECT 6404 6403 6405 CONECT 6405 6404 CONECT 6406 6407 6411 CONECT 6407 6406 6408 CONECT 6408 6407 6409 CONECT 6409 6408 6410 6415 CONECT 6410 6409 6411 6413 CONECT 6411 6406 6410 6412 CONECT 6412 6411 CONECT 6413 6410 6414 CONECT 6414 6413 6415 CONECT 6415 6409 6414 6416 CONECT 6416 6415 6417 6426 CONECT 6417 6416 6418 6419 CONECT 6418 6417 CONECT 6419 6417 6420 6425 CONECT 6420 6419 6421 CONECT 6421 6420 6422 6423 6424 CONECT 6422 6421 CONECT 6423 6421 CONECT 6424 6421 CONECT 6425 6419 6426 6427 CONECT 6426 6416 6425 CONECT 6427 6425 6428 CONECT 6428 6427 6429 CONECT 6429 6428 6430 6431 6432 CONECT 6430 6429 CONECT 6431 6429 CONECT 6432 6429 6433 CONECT 6433 6432 6434 6435 6436 CONECT 6434 6433 CONECT 6435 6433 CONECT 6436 6433 6438 CONECT 6437 6438 6439 6440 6441 CONECT 6438 6436 6437 CONECT 6439 6437 CONECT 6440 6437 CONECT 6441 6437 6442 6443 CONECT 6442 6441 CONECT 6443 6441 6444 6445 CONECT 6444 6443 CONECT 6445 6443 6446 CONECT 6446 6445 6447 CONECT 6447 6446 6448 CONECT 6448 6447 6449 6450 CONECT 6449 6448 CONECT 6450 6448 6451 CONECT 6451 6450 6452 CONECT 6452 6451 6453 CONECT 6453 6452 CONECT 6454 6455 6456 CONECT 6455 6454 CONECT 6456 6454 6457 6458 CONECT 6457 6456 CONECT 6458 6456 6459 CONECT 6459 6458 CONECT 6460 6461 6462 CONECT 6461 6460 CONECT 6462 6460 6463 6464 CONECT 6463 6462 CONECT 6464 6462 6465 CONECT 6465 6464 CONECT 6466 6467 6468 CONECT 6467 6466 CONECT 6468 6466 6469 6470 CONECT 6469 6468 CONECT 6470 6468 6471 CONECT 6471 6470 MASTER 427 0 5 38 26 0 0 6 6916 2 114 62 END