HEADER TRANSFERASE 06-MAY-25 9UUD TITLE STILBENE SYNTHASE OF CENCHRUS AMERICANUS CO-CRYSTALLIZED WITH MALONYL- TITLE 2 COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: STILBENE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CENCHRUS AMERICANUS; SOURCE 3 ORGANISM_TAXID: 4543; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS STILBENE SYNTHASE, STS, TYPE III POLYKETIDE SYNTHASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.C.POW,C.J.KHOO,Q.HAO REVDAT 1 27-MAY-26 9UUD 0 JRNL AUTH K.C.POW,C.J.KHOO,Q.HAO JRNL TITL STILBENE SYNTHASE OF CENCHRUS AMERICANUS CO-CRYSTALLIZED JRNL TITL 2 WITH MALONYL-COA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 (REFMACAT 0.4.100) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 156858 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.339 REMARK 3 FREE R VALUE TEST SET COUNT : 2101 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.68 REMARK 3 REFLECTION IN BIN (WORKING SET) : 11360 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.4130 REMARK 3 BIN FREE R VALUE SET COUNT : 154 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6080 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 156 REMARK 3 SOLVENT ATOMS : 357 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.18000 REMARK 3 B22 (A**2) : 1.01800 REMARK 3 B33 (A**2) : 0.16200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.060 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.063 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.910 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6694 ; 0.011 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 6416 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9113 ; 2.034 ; 1.825 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14796 ; 0.688 ; 1.749 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 871 ; 6.716 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 54 ; 7.182 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1147 ;13.475 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1039 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7915 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1491 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1288 ; 0.219 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 119 ; 0.220 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3183 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 350 ; 0.179 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3314 ; 2.725 ; 2.648 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3314 ; 2.725 ; 2.648 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4169 ; 3.677 ; 4.738 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4170 ; 3.677 ; 4.740 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3380 ; 5.195 ; 3.345 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3381 ; 5.195 ; 3.346 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4919 ; 7.490 ; 5.894 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4920 ; 7.489 ; 5.895 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9UUD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 08-MAY-25. REMARK 100 THE DEPOSITION ID IS D_1300058612. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 156859 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 47.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.45 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.25 M SODIUM CITRATE TRIBASIC, 0.1 M REMARK 280 HEPES PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.17500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 68.69000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 89.76000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.17500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 68.69000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.76000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 52.17500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 68.69000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 89.76000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 52.17500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 68.69000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 89.76000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 686 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR B 394 REMARK 465 ALA B 395 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 119 NH2 ARG B 237 2.04 REMARK 500 OG1 THR B 135 O HOH B 501 2.06 REMARK 500 OD1 ASN A 154 O HOH A 501 2.11 REMARK 500 OG1 THR A 135 O HOH A 502 2.14 REMARK 500 O THR A 47 O HOH A 503 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 15 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 MET A 34 CG - SD - CE ANGL. DEV. = 9.7 DEGREES REMARK 500 GLU A 114 CG - CD - OE1 ANGL. DEV. = 15.1 DEGREES REMARK 500 GLU A 114 CG - CD - OE2 ANGL. DEV. = -16.7 DEGREES REMARK 500 MET A 140 CG - SD - CE ANGL. DEV. = -9.7 DEGREES REMARK 500 ARG A 202 CA - CB - CG ANGL. DEV. = 17.0 DEGREES REMARK 500 ARG A 202 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 326 NE - CZ - NH1 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 326 NE - CZ - NH2 ANGL. DEV. = 5.8 DEGREES REMARK 500 CYS A 344 CB - CA - C ANGL. DEV. = -13.7 DEGREES REMARK 500 ARG B 15 NE - CZ - NH2 ANGL. DEV. = -6.2 DEGREES REMARK 500 MET B 34 CG - SD - CE ANGL. DEV. = 11.2 DEGREES REMARK 500 MET B 140 CG - SD - CE ANGL. DEV. = -11.4 DEGREES REMARK 500 ARG B 159 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 HIS B 234 CB - CA - C ANGL. DEV. = 12.1 DEGREES REMARK 500 ARG B 237 CD - NE - CZ ANGL. DEV. = 11.3 DEGREES REMARK 500 ARG B 237 NE - CZ - NH1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG B 237 NE - CZ - NH2 ANGL. DEV. = -7.1 DEGREES REMARK 500 ARG B 326 NE - CZ - NH2 ANGL. DEV. = 4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 136 64.15 -117.00 REMARK 500 SER A 136 -152.82 60.93 REMARK 500 SER A 341 -132.62 52.78 REMARK 500 MET B 52 76.23 -100.73 REMARK 500 SER B 90 -149.68 -101.97 REMARK 500 ALA B 91 129.92 60.68 REMARK 500 SER B 93 6.48 -152.76 REMARK 500 SER B 136 67.08 -117.04 REMARK 500 SER B 136 -141.00 -144.71 REMARK 500 ASP B 139 157.23 176.07 REMARK 500 MET B 340 32.31 -95.40 REMARK 500 SER B 341 -131.80 51.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 15 0.12 SIDE CHAIN REMARK 500 ARG B 15 0.14 SIDE CHAIN REMARK 500 ARG B 326 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 9UUD A -1 395 PDB 9UUD 9UUD -1 395 DBREF 9UUD B -1 395 PDB 9UUD 9UUD -1 395 SEQRES 1 A 397 GLY SER MET ALA ALA ASN VAL THR VAL GLU GLU VAL ARG SEQRES 2 A 397 LYS ALA GLN ARG ALA GLU GLY PRO ALA THR VAL LEU ALA SEQRES 3 A 397 ILE GLY THR THR THR PRO PRO ASN CYS MET TYR GLN ALA SEQRES 4 A 397 ASP TYR ALA ASP TYR TYR PHE ARG VAL THR LYS SER GLU SEQRES 5 A 397 HIS MET THR GLU LEU LYS GLU LYS PHE LYS ARG ILE CYS SEQRES 6 A 397 HIS LYS SER MET ILE GLN LYS ARG TYR LEU HIS LEU THR SEQRES 7 A 397 GLU ASP ILE LEU LEU GLU ASN PRO ASN MET ALA SER TYR SEQRES 8 A 397 SER ALA PRO SER LEU ASN ALA ARG GLN ASP ILE LEU VAL SEQRES 9 A 397 GLU GLU VAL PRO LYS MET GLY ALA VAL ALA ALA GLU LYS SEQRES 10 A 397 ALA LEU LYS GLU TRP GLY GLN PRO ARG SER GLN ILE THR SEQRES 11 A 397 HIS ILE ILE PHE CYS THR THR SER GLY VAL ASP MET PRO SEQRES 12 A 397 GLY ALA ASP SER ARG THR ILE LYS LEU LEU GLY LEU ASN SEQRES 13 A 397 PRO SER VAL LYS ARG VAL MET LEU TYR HIS GLN GLY CYS SEQRES 14 A 397 PHE ALA GLY GLY MET VAL LEU ARG ILE ALA LYS ASP LEU SEQRES 15 A 397 ALA GLU ASN ASN ARG GLY ALA ARG VAL LEU ILE VAL CYS SEQRES 16 A 397 SER GLU ILE THR VAL VAL THR PHE ARG GLY PRO SER GLU SEQRES 17 A 397 ASP HIS LEU ASP SER LEU VAL GLY GLN ALA LEU PHE GLY SEQRES 18 A 397 ASP GLY ALA ALA ALA VAL ILE VAL GLY ALA ASP PRO ASP SEQRES 19 A 397 GLU HIS MET GLU ARG SER LEU PHE GLN MET VAL SER ALA SEQRES 20 A 397 SER GLU THR ILE LEU PRO ASN SER ASP GLY ALA ILE GLU SEQRES 21 A 397 GLY HIS LEU ARG GLU VAL GLY LEU THR PHE HIS LEU GLN SEQRES 22 A 397 GLU ARG VAL PRO GLU LEU ILE SER SER ASN ILE GLU ARG SEQRES 23 A 397 LEU LEU GLU GLU SER PHE LYS PRO LEU GLY ILE SER ASP SEQRES 24 A 397 TRP ASN SER ILE PHE TRP VAL ALA HIS PRO GLY GLY PRO SEQRES 25 A 397 ALA ILE LEU ASN ALA VAL GLU LYS LYS ALA GLY ILE ASP SEQRES 26 A 397 LYS ALA ARG LEU ARG ALA THR ARG GLN VAL LEU SER GLU SEQRES 27 A 397 TYR GLY ASN MET SER SER ALA CYS VAL LEU PHE ILE LEU SEQRES 28 A 397 ASP GLU MET ARG LYS PHE SER ALA GLU ASP GLY ARG THR SEQRES 29 A 397 THR THR GLY GLU GLY MET ASP TRP GLY VAL LEU PHE GLY SEQRES 30 A 397 PHE GLY PRO GLY LEU THR VAL GLU THR ILE VAL LEU HIS SEQRES 31 A 397 SER VAL PRO ILE ALA THR ALA SEQRES 1 B 397 GLY SER MET ALA ALA ASN VAL THR VAL GLU GLU VAL ARG SEQRES 2 B 397 LYS ALA GLN ARG ALA GLU GLY PRO ALA THR VAL LEU ALA SEQRES 3 B 397 ILE GLY THR THR THR PRO PRO ASN CYS MET TYR GLN ALA SEQRES 4 B 397 ASP TYR ALA ASP TYR TYR PHE ARG VAL THR LYS SER GLU SEQRES 5 B 397 HIS MET THR GLU LEU LYS GLU LYS PHE LYS ARG ILE CYS SEQRES 6 B 397 HIS LYS SER MET ILE GLN LYS ARG TYR LEU HIS LEU THR SEQRES 7 B 397 GLU ASP ILE LEU LEU GLU ASN PRO ASN MET ALA SER TYR SEQRES 8 B 397 SER ALA PRO SER LEU ASN ALA ARG GLN ASP ILE LEU VAL SEQRES 9 B 397 GLU GLU VAL PRO LYS MET GLY ALA VAL ALA ALA GLU LYS SEQRES 10 B 397 ALA LEU LYS GLU TRP GLY GLN PRO ARG SER GLN ILE THR SEQRES 11 B 397 HIS ILE ILE PHE CYS THR THR SER GLY VAL ASP MET PRO SEQRES 12 B 397 GLY ALA ASP SER ARG THR ILE LYS LEU LEU GLY LEU ASN SEQRES 13 B 397 PRO SER VAL LYS ARG VAL MET LEU TYR HIS GLN GLY CYS SEQRES 14 B 397 PHE ALA GLY GLY MET VAL LEU ARG ILE ALA LYS ASP LEU SEQRES 15 B 397 ALA GLU ASN ASN ARG GLY ALA ARG VAL LEU ILE VAL CYS SEQRES 16 B 397 SER GLU ILE THR VAL VAL THR PHE ARG GLY PRO SER GLU SEQRES 17 B 397 ASP HIS LEU ASP SER LEU VAL GLY GLN ALA LEU PHE GLY SEQRES 18 B 397 ASP GLY ALA ALA ALA VAL ILE VAL GLY ALA ASP PRO ASP SEQRES 19 B 397 GLU HIS MET GLU ARG SER LEU PHE GLN MET VAL SER ALA SEQRES 20 B 397 SER GLU THR ILE LEU PRO ASN SER ASP GLY ALA ILE GLU SEQRES 21 B 397 GLY HIS LEU ARG GLU VAL GLY LEU THR PHE HIS LEU GLN SEQRES 22 B 397 GLU ARG VAL PRO GLU LEU ILE SER SER ASN ILE GLU ARG SEQRES 23 B 397 LEU LEU GLU GLU SER PHE LYS PRO LEU GLY ILE SER ASP SEQRES 24 B 397 TRP ASN SER ILE PHE TRP VAL ALA HIS PRO GLY GLY PRO SEQRES 25 B 397 ALA ILE LEU ASN ALA VAL GLU LYS LYS ALA GLY ILE ASP SEQRES 26 B 397 LYS ALA ARG LEU ARG ALA THR ARG GLN VAL LEU SER GLU SEQRES 27 B 397 TYR GLY ASN MET SER SER ALA CYS VAL LEU PHE ILE LEU SEQRES 28 B 397 ASP GLU MET ARG LYS PHE SER ALA GLU ASP GLY ARG THR SEQRES 29 B 397 THR THR GLY GLU GLY MET ASP TRP GLY VAL LEU PHE GLY SEQRES 30 B 397 PHE GLY PRO GLY LEU THR VAL GLU THR ILE VAL LEU HIS SEQRES 31 B 397 SER VAL PRO ILE ALA THR ALA HET COA A 401 48 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET GOL A 407 6 HET GOL A 408 6 HET COA B 401 48 HET GOL B 402 6 HET GOL B 403 6 HET GOL B 404 6 HETNAM COA COENZYME A HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 COA 2(C21 H36 N7 O16 P3 S) FORMUL 4 GOL 10(C3 H8 O3) FORMUL 15 HOH *357(H2 O) HELIX 1 AA1 THR A 6 ARG A 15 1 10 HELIX 2 AA2 ASP A 38 THR A 47 1 10 HELIX 3 AA3 MET A 52 SER A 66 1 15 HELIX 4 AA4 THR A 76 ASN A 83 1 8 HELIX 5 AA5 PRO A 84 SER A 88 5 5 HELIX 6 AA6 SER A 93 GLY A 121 1 29 HELIX 7 AA7 PRO A 123 ILE A 127 5 5 HELIX 8 AA8 GLY A 142 GLY A 152 1 11 HELIX 9 AA9 PHE A 168 ASN A 183 1 16 HELIX 10 AB1 ILE A 196 THR A 200 5 5 HELIX 11 AB2 HIS A 208 PHE A 218 1 11 HELIX 12 AB3 ARG A 273 LYS A 291 1 19 HELIX 13 AB4 PRO A 292 GLY A 294 5 3 HELIX 14 AB5 ASP A 297 ILE A 301 5 5 HELIX 15 AB6 GLY A 309 GLY A 321 1 13 HELIX 16 AB7 ASP A 323 ARG A 326 5 4 HELIX 17 AB8 LEU A 327 GLY A 338 1 12 HELIX 18 AB9 MET A 340 SER A 342 5 3 HELIX 19 AC1 ALA A 343 ASP A 359 1 17 HELIX 20 AC2 THR B 6 ARG B 15 1 10 HELIX 21 AC3 GLN B 36 THR B 47 1 12 HELIX 22 AC4 MET B 52 SER B 66 1 15 HELIX 23 AC5 THR B 76 ASN B 83 1 8 HELIX 24 AC6 PRO B 84 SER B 88 5 5 HELIX 25 AC7 SER B 93 TRP B 120 1 28 HELIX 26 AC8 PRO B 123 ILE B 127 5 5 HELIX 27 AC9 GLY B 142 GLY B 152 1 11 HELIX 28 AD1 PHE B 168 ASN B 183 1 16 HELIX 29 AD2 ILE B 196 THR B 200 5 5 HELIX 30 AD3 HIS B 208 PHE B 218 1 11 HELIX 31 AD4 ARG B 273 LYS B 291 1 19 HELIX 32 AD5 PRO B 292 GLY B 294 5 3 HELIX 33 AD6 ASP B 297 ILE B 301 5 5 HELIX 34 AD7 GLY B 309 GLY B 321 1 13 HELIX 35 AD8 ASP B 323 ARG B 326 5 4 HELIX 36 AD9 LEU B 327 GLY B 338 1 12 HELIX 37 AE1 MET B 340 SER B 342 5 3 HELIX 38 AE2 ALA B 343 GLY B 360 1 18 SHEET 1 AA1 9 LYS A 158 TYR A 163 0 SHEET 2 AA1 9 HIS A 129 THR A 134 1 N PHE A 132 O LEU A 162 SHEET 3 AA1 9 ARG A 188 GLU A 195 1 O LEU A 190 N HIS A 129 SHEET 4 AA1 9 GLY A 221 GLY A 228 -1 O VAL A 225 N ILE A 191 SHEET 5 AA1 9 THR A 21 THR A 28 -1 N LEU A 23 O ILE A 226 SHEET 6 AA1 9 PHE A 240 ILE A 249 -1 O PHE A 240 N VAL A 22 SHEET 7 AA1 9 THR A 381 SER A 389 -1 O HIS A 388 N GLN A 241 SHEET 8 AA1 9 TRP A 370 GLY A 377 -1 N LEU A 373 O ILE A 385 SHEET 9 AA1 9 PHE A 302 ALA A 305 1 N VAL A 304 O PHE A 374 SHEET 1 AA2 2 CYS A 33 TYR A 35 0 SHEET 2 AA2 2 LYS A 70 TYR A 72 -1 O ARG A 71 N MET A 34 SHEET 1 AA3 3 ASP A 139 MET A 140 0 SHEET 2 AA3 3 ILE B 257 ARG B 262 -1 O GLY B 259 N MET A 140 SHEET 3 AA3 3 GLY B 265 LEU B 270 -1 O THR B 267 N HIS B 260 SHEET 1 AA4 2 ILE A 257 ARG A 262 0 SHEET 2 AA4 2 GLY A 265 LEU A 270 -1 O THR A 267 N HIS A 260 SHEET 1 AA5 9 LYS B 158 TYR B 163 0 SHEET 2 AA5 9 HIS B 129 THR B 134 1 N PHE B 132 O LEU B 162 SHEET 3 AA5 9 ARG B 188 GLU B 195 1 O VAL B 192 N ILE B 131 SHEET 4 AA5 9 GLY B 221 GLY B 228 -1 O VAL B 225 N ILE B 191 SHEET 5 AA5 9 THR B 21 THR B 28 -1 N LEU B 23 O ILE B 226 SHEET 6 AA5 9 PHE B 240 ILE B 249 -1 O PHE B 240 N VAL B 22 SHEET 7 AA5 9 THR B 381 SER B 389 -1 O VAL B 386 N VAL B 243 SHEET 8 AA5 9 TRP B 370 GLY B 377 -1 N LEU B 373 O ILE B 385 SHEET 9 AA5 9 PHE B 302 ALA B 305 1 N VAL B 304 O PHE B 374 SHEET 1 AA6 2 CYS B 33 TYR B 35 0 SHEET 2 AA6 2 LYS B 70 TYR B 72 -1 O ARG B 71 N MET B 34 CISPEP 1 MET A 140 PRO A 141 0 -3.50 CISPEP 2 GLY A 379 LEU A 380 0 0.47 CISPEP 3 MET B 140 PRO B 141 0 -2.96 CISPEP 4 GLY B 379 LEU B 380 0 3.58 CRYST1 104.350 137.380 179.520 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009583 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007279 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005570 0.00000 CONECT 6390 6391 6395 CONECT 6391 6390 6392 CONECT 6392 6391 6393 CONECT 6393 6392 6394 6399 CONECT 6394 6393 6395 6397 CONECT 6395 6390 6394 6396 CONECT 6396 6395 CONECT 6397 6394 6398 CONECT 6398 6397 6399 CONECT 6399 6393 6398 6400 CONECT 6400 6399 6401 6410 CONECT 6401 6400 6402 6403 CONECT 6402 6401 CONECT 6403 6401 6404 6409 CONECT 6404 6403 6405 CONECT 6405 6404 6406 6407 6408 CONECT 6406 6405 CONECT 6407 6405 CONECT 6408 6405 CONECT 6409 6403 6410 6411 CONECT 6410 6400 6409 CONECT 6411 6409 6412 CONECT 6412 6411 6413 CONECT 6413 6412 6414 6415 6416 CONECT 6414 6413 CONECT 6415 6413 CONECT 6416 6413 6417 CONECT 6417 6416 6418 6419 6420 CONECT 6418 6417 CONECT 6419 6417 CONECT 6420 6417 6422 CONECT 6421 6422 6423 6424 6425 CONECT 6422 6420 6421 CONECT 6423 6421 CONECT 6424 6421 CONECT 6425 6421 6426 6427 CONECT 6426 6425 CONECT 6427 6425 6428 6429 CONECT 6428 6427 CONECT 6429 6427 6430 CONECT 6430 6429 6431 CONECT 6431 6430 6432 CONECT 6432 6431 6433 6434 CONECT 6433 6432 CONECT 6434 6432 6435 CONECT 6435 6434 6436 CONECT 6436 6435 6437 CONECT 6437 6436 CONECT 6438 6439 6440 CONECT 6439 6438 CONECT 6440 6438 6441 6442 CONECT 6441 6440 CONECT 6442 6440 6443 CONECT 6443 6442 CONECT 6444 6445 6446 CONECT 6445 6444 CONECT 6446 6444 6447 6448 CONECT 6447 6446 CONECT 6448 6446 6449 CONECT 6449 6448 CONECT 6450 6451 6452 CONECT 6451 6450 CONECT 6452 6450 6453 6454 CONECT 6453 6452 CONECT 6454 6452 6455 CONECT 6455 6454 CONECT 6456 6457 6458 CONECT 6457 6456 CONECT 6458 6456 6459 6460 CONECT 6459 6458 CONECT 6460 6458 6461 CONECT 6461 6460 CONECT 6462 6463 6464 CONECT 6463 6462 CONECT 6464 6462 6465 6466 CONECT 6465 6464 CONECT 6466 6464 6467 CONECT 6467 6466 CONECT 6468 6469 6470 CONECT 6469 6468 CONECT 6470 6468 6471 6472 CONECT 6471 6470 CONECT 6472 6470 6473 CONECT 6473 6472 CONECT 6474 6475 6476 CONECT 6475 6474 CONECT 6476 6474 6477 6478 CONECT 6477 6476 CONECT 6478 6476 6479 CONECT 6479 6478 CONECT 6480 6481 6485 CONECT 6481 6480 6482 CONECT 6482 6481 6483 CONECT 6483 6482 6484 6489 CONECT 6484 6483 6485 6487 CONECT 6485 6480 6484 6486 CONECT 6486 6485 CONECT 6487 6484 6488 CONECT 6488 6487 6489 CONECT 6489 6483 6488 6490 CONECT 6490 6489 6491 6500 CONECT 6491 6490 6492 6493 CONECT 6492 6491 CONECT 6493 6491 6494 6499 CONECT 6494 6493 6495 CONECT 6495 6494 6496 6497 6498 CONECT 6496 6495 CONECT 6497 6495 CONECT 6498 6495 CONECT 6499 6493 6500 6501 CONECT 6500 6490 6499 CONECT 6501 6499 6502 CONECT 6502 6501 6503 CONECT 6503 6502 6504 6505 6506 CONECT 6504 6503 CONECT 6505 6503 CONECT 6506 6503 6507 CONECT 6507 6506 6508 6509 6510 CONECT 6508 6507 CONECT 6509 6507 CONECT 6510 6507 6512 CONECT 6511 6512 6513 6514 6515 CONECT 6512 6510 6511 CONECT 6513 6511 CONECT 6514 6511 CONECT 6515 6511 6516 6517 CONECT 6516 6515 CONECT 6517 6515 6518 6519 CONECT 6518 6517 CONECT 6519 6517 6520 CONECT 6520 6519 6521 CONECT 6521 6520 6522 CONECT 6522 6521 6523 6524 CONECT 6523 6522 CONECT 6524 6522 6525 CONECT 6525 6524 6526 CONECT 6526 6525 6527 CONECT 6527 6526 CONECT 6528 6529 6530 CONECT 6529 6528 CONECT 6530 6528 6531 6532 CONECT 6531 6530 CONECT 6532 6530 6533 CONECT 6533 6532 CONECT 6534 6535 6536 CONECT 6535 6534 CONECT 6536 6534 6537 6538 CONECT 6537 6536 CONECT 6538 6536 6539 CONECT 6539 6538 CONECT 6540 6541 6542 CONECT 6541 6540 CONECT 6542 6540 6543 6544 CONECT 6543 6542 CONECT 6544 6542 6545 CONECT 6545 6544 MASTER 369 0 12 38 27 0 0 6 6593 2 156 62 END