data_9UXN # _entry.id 9UXN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9UXN pdb_00009uxn 10.2210/pdb9uxn/pdb WWPDB D_1300059454 ? ? EMDB EMD-64587 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-05-27 ? 2 'EM metadata' 1 0 2026-05-27 ? 3 'Half map' 1 0 2026-05-27 1 4 'Half map' 1 0 2026-05-27 2 5 Image 1 0 2026-05-27 ? 6 Mask 1 0 2026-05-27 1 7 'Primary map' 1 0 2026-05-27 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 Mask repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9UXN _pdbx_database_status.recvd_initial_deposition_date 2025-05-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Local refinement of Succinate bound OXGR1' _pdbx_database_related.db_id EMD-64587 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email liuheng@simm.ac.cn _pdbx_contact_author.name_first Heng _pdbx_contact_author.name_last Liu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9195-1191 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, H.' 1 0000-0001-9195-1191 'Zhang, X.' 2 ? 'Xu, H.E.' 3 0000-0002-6829-8144 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Local refinement of AKG bound OXGR1' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, H.' 1 0000-0001-9195-1191 primary 'Zhang, X.' 2 ? primary 'Xu, H.E.' 3 0000-0002-6829-8144 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '2-oxoglutarate receptor 1' 38284.020 1 ? ? ? ? 2 non-polymer syn 'SUCCINIC ACID' 118.088 1 ? ? ? ? 3 water nat water 18.015 3 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Alpha-ketoglutarate receptor 1,G-protein coupled receptor 80,G-protein coupled receptor 99,P2Y purinoceptor 15,P2Y15,P2Y-like GPCR,P2Y-like nucleotide receptor ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNEPLDYLANASDFPDYAAAFGNCTDENIPLKMHYLPVIYGIIFLVGFPGNAVVISTYIFKMRPWKSSTIIMLNLACTDL LYLTSLPFLIHYYASGENWIFGDFMCKFIRFSFHFNLYSSILFLTCFSIFRYCVIIHPMSCFSIHKTRCAVVACAVVWII SLVAVIPMTFLITSTNRTNRSACLDLTSSDELNTIKWYNLILTATTFCLPLVIVTLCYTTIIHTLTHGLQTDSCLKQKAR RLTILLLLAFYVCFLPFHILRVIRIESRLLSISCSIENQIHEAYIVSRPLAALNTFGNLLLYVVVSDNFQQAVCSTVRCK VSGNLEQAKKISYSNNP ; _entity_poly.pdbx_seq_one_letter_code_can ;MNEPLDYLANASDFPDYAAAFGNCTDENIPLKMHYLPVIYGIIFLVGFPGNAVVISTYIFKMRPWKSSTIIMLNLACTDL LYLTSLPFLIHYYASGENWIFGDFMCKFIRFSFHFNLYSSILFLTCFSIFRYCVIIHPMSCFSIHKTRCAVVACAVVWII SLVAVIPMTFLITSTNRTNRSACLDLTSSDELNTIKWYNLILTATTFCLPLVIVTLCYTTIIHTLTHGLQTDSCLKQKAR RLTILLLLAFYVCFLPFHILRVIRIESRLLSISCSIENQIHEAYIVSRPLAALNTFGNLLLYVVVSDNFQQAVCSTVRCK VSGNLEQAKKISYSNNP ; _entity_poly.pdbx_strand_id R _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SUCCINIC ACID' SIN 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 GLU n 1 4 PRO n 1 5 LEU n 1 6 ASP n 1 7 TYR n 1 8 LEU n 1 9 ALA n 1 10 ASN n 1 11 ALA n 1 12 SER n 1 13 ASP n 1 14 PHE n 1 15 PRO n 1 16 ASP n 1 17 TYR n 1 18 ALA n 1 19 ALA n 1 20 ALA n 1 21 PHE n 1 22 GLY n 1 23 ASN n 1 24 CYS n 1 25 THR n 1 26 ASP n 1 27 GLU n 1 28 ASN n 1 29 ILE n 1 30 PRO n 1 31 LEU n 1 32 LYS n 1 33 MET n 1 34 HIS n 1 35 TYR n 1 36 LEU n 1 37 PRO n 1 38 VAL n 1 39 ILE n 1 40 TYR n 1 41 GLY n 1 42 ILE n 1 43 ILE n 1 44 PHE n 1 45 LEU n 1 46 VAL n 1 47 GLY n 1 48 PHE n 1 49 PRO n 1 50 GLY n 1 51 ASN n 1 52 ALA n 1 53 VAL n 1 54 VAL n 1 55 ILE n 1 56 SER n 1 57 THR n 1 58 TYR n 1 59 ILE n 1 60 PHE n 1 61 LYS n 1 62 MET n 1 63 ARG n 1 64 PRO n 1 65 TRP n 1 66 LYS n 1 67 SER n 1 68 SER n 1 69 THR n 1 70 ILE n 1 71 ILE n 1 72 MET n 1 73 LEU n 1 74 ASN n 1 75 LEU n 1 76 ALA n 1 77 CYS n 1 78 THR n 1 79 ASP n 1 80 LEU n 1 81 LEU n 1 82 TYR n 1 83 LEU n 1 84 THR n 1 85 SER n 1 86 LEU n 1 87 PRO n 1 88 PHE n 1 89 LEU n 1 90 ILE n 1 91 HIS n 1 92 TYR n 1 93 TYR n 1 94 ALA n 1 95 SER n 1 96 GLY n 1 97 GLU n 1 98 ASN n 1 99 TRP n 1 100 ILE n 1 101 PHE n 1 102 GLY n 1 103 ASP n 1 104 PHE n 1 105 MET n 1 106 CYS n 1 107 LYS n 1 108 PHE n 1 109 ILE n 1 110 ARG n 1 111 PHE n 1 112 SER n 1 113 PHE n 1 114 HIS n 1 115 PHE n 1 116 ASN n 1 117 LEU n 1 118 TYR n 1 119 SER n 1 120 SER n 1 121 ILE n 1 122 LEU n 1 123 PHE n 1 124 LEU n 1 125 THR n 1 126 CYS n 1 127 PHE n 1 128 SER n 1 129 ILE n 1 130 PHE n 1 131 ARG n 1 132 TYR n 1 133 CYS n 1 134 VAL n 1 135 ILE n 1 136 ILE n 1 137 HIS n 1 138 PRO n 1 139 MET n 1 140 SER n 1 141 CYS n 1 142 PHE n 1 143 SER n 1 144 ILE n 1 145 HIS n 1 146 LYS n 1 147 THR n 1 148 ARG n 1 149 CYS n 1 150 ALA n 1 151 VAL n 1 152 VAL n 1 153 ALA n 1 154 CYS n 1 155 ALA n 1 156 VAL n 1 157 VAL n 1 158 TRP n 1 159 ILE n 1 160 ILE n 1 161 SER n 1 162 LEU n 1 163 VAL n 1 164 ALA n 1 165 VAL n 1 166 ILE n 1 167 PRO n 1 168 MET n 1 169 THR n 1 170 PHE n 1 171 LEU n 1 172 ILE n 1 173 THR n 1 174 SER n 1 175 THR n 1 176 ASN n 1 177 ARG n 1 178 THR n 1 179 ASN n 1 180 ARG n 1 181 SER n 1 182 ALA n 1 183 CYS n 1 184 LEU n 1 185 ASP n 1 186 LEU n 1 187 THR n 1 188 SER n 1 189 SER n 1 190 ASP n 1 191 GLU n 1 192 LEU n 1 193 ASN n 1 194 THR n 1 195 ILE n 1 196 LYS n 1 197 TRP n 1 198 TYR n 1 199 ASN n 1 200 LEU n 1 201 ILE n 1 202 LEU n 1 203 THR n 1 204 ALA n 1 205 THR n 1 206 THR n 1 207 PHE n 1 208 CYS n 1 209 LEU n 1 210 PRO n 1 211 LEU n 1 212 VAL n 1 213 ILE n 1 214 VAL n 1 215 THR n 1 216 LEU n 1 217 CYS n 1 218 TYR n 1 219 THR n 1 220 THR n 1 221 ILE n 1 222 ILE n 1 223 HIS n 1 224 THR n 1 225 LEU n 1 226 THR n 1 227 HIS n 1 228 GLY n 1 229 LEU n 1 230 GLN n 1 231 THR n 1 232 ASP n 1 233 SER n 1 234 CYS n 1 235 LEU n 1 236 LYS n 1 237 GLN n 1 238 LYS n 1 239 ALA n 1 240 ARG n 1 241 ARG n 1 242 LEU n 1 243 THR n 1 244 ILE n 1 245 LEU n 1 246 LEU n 1 247 LEU n 1 248 LEU n 1 249 ALA n 1 250 PHE n 1 251 TYR n 1 252 VAL n 1 253 CYS n 1 254 PHE n 1 255 LEU n 1 256 PRO n 1 257 PHE n 1 258 HIS n 1 259 ILE n 1 260 LEU n 1 261 ARG n 1 262 VAL n 1 263 ILE n 1 264 ARG n 1 265 ILE n 1 266 GLU n 1 267 SER n 1 268 ARG n 1 269 LEU n 1 270 LEU n 1 271 SER n 1 272 ILE n 1 273 SER n 1 274 CYS n 1 275 SER n 1 276 ILE n 1 277 GLU n 1 278 ASN n 1 279 GLN n 1 280 ILE n 1 281 HIS n 1 282 GLU n 1 283 ALA n 1 284 TYR n 1 285 ILE n 1 286 VAL n 1 287 SER n 1 288 ARG n 1 289 PRO n 1 290 LEU n 1 291 ALA n 1 292 ALA n 1 293 LEU n 1 294 ASN n 1 295 THR n 1 296 PHE n 1 297 GLY n 1 298 ASN n 1 299 LEU n 1 300 LEU n 1 301 LEU n 1 302 TYR n 1 303 VAL n 1 304 VAL n 1 305 VAL n 1 306 SER n 1 307 ASP n 1 308 ASN n 1 309 PHE n 1 310 GLN n 1 311 GLN n 1 312 ALA n 1 313 VAL n 1 314 CYS n 1 315 SER n 1 316 THR n 1 317 VAL n 1 318 ARG n 1 319 CYS n 1 320 LYS n 1 321 VAL n 1 322 SER n 1 323 GLY n 1 324 ASN n 1 325 LEU n 1 326 GLU n 1 327 GLN n 1 328 ALA n 1 329 LYS n 1 330 LYS n 1 331 ILE n 1 332 SER n 1 333 TYR n 1 334 SER n 1 335 ASN n 1 336 ASN n 1 337 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 337 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'OXGR1, GPR80, GPR99, P2RY15, P2Y15' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIN non-polymer . 'SUCCINIC ACID' ? 'C4 H6 O4' 118.088 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? R . n A 1 2 ASN 2 2 ? ? ? R . n A 1 3 GLU 3 3 ? ? ? R . n A 1 4 PRO 4 4 ? ? ? R . n A 1 5 LEU 5 5 ? ? ? R . n A 1 6 ASP 6 6 ? ? ? R . n A 1 7 TYR 7 7 ? ? ? R . n A 1 8 LEU 8 8 ? ? ? R . n A 1 9 ALA 9 9 ? ? ? R . n A 1 10 ASN 10 10 ? ? ? R . n A 1 11 ALA 11 11 ? ? ? R . n A 1 12 SER 12 12 ? ? ? R . n A 1 13 ASP 13 13 ? ? ? R . n A 1 14 PHE 14 14 ? ? ? R . n A 1 15 PRO 15 15 ? ? ? R . n A 1 16 ASP 16 16 ? ? ? R . n A 1 17 TYR 17 17 ? ? ? R . n A 1 18 ALA 18 18 ? ? ? R . n A 1 19 ALA 19 19 ? ? ? R . n A 1 20 ALA 20 20 ? ? ? R . n A 1 21 PHE 21 21 ? ? ? R . n A 1 22 GLY 22 22 ? ? ? R . n A 1 23 ASN 23 23 ? ? ? R . n A 1 24 CYS 24 24 ? ? ? R . n A 1 25 THR 25 25 ? ? ? R . n A 1 26 ASP 26 26 ? ? ? R . n A 1 27 GLU 27 27 ? ? ? R . n A 1 28 ASN 28 28 28 ASN ASN R . n A 1 29 ILE 29 29 29 ILE ILE R . n A 1 30 PRO 30 30 30 PRO PRO R . n A 1 31 LEU 31 31 31 LEU LEU R . n A 1 32 LYS 32 32 32 LYS LYS R . n A 1 33 MET 33 33 33 MET MET R . n A 1 34 HIS 34 34 34 HIS HIS R . n A 1 35 TYR 35 35 35 TYR TYR R . n A 1 36 LEU 36 36 36 LEU LEU R . n A 1 37 PRO 37 37 37 PRO PRO R . n A 1 38 VAL 38 38 38 VAL VAL R . n A 1 39 ILE 39 39 39 ILE ILE R . n A 1 40 TYR 40 40 40 TYR TYR R . n A 1 41 GLY 41 41 41 GLY GLY R . n A 1 42 ILE 42 42 42 ILE ILE R . n A 1 43 ILE 43 43 43 ILE ILE R . n A 1 44 PHE 44 44 44 PHE PHE R . n A 1 45 LEU 45 45 45 LEU LEU R . n A 1 46 VAL 46 46 46 VAL VAL R . n A 1 47 GLY 47 47 47 GLY GLY R . n A 1 48 PHE 48 48 48 PHE PHE R . n A 1 49 PRO 49 49 49 PRO PRO R . n A 1 50 GLY 50 50 50 GLY GLY R . n A 1 51 ASN 51 51 51 ASN ASN R . n A 1 52 ALA 52 52 52 ALA ALA R . n A 1 53 VAL 53 53 53 VAL VAL R . n A 1 54 VAL 54 54 54 VAL VAL R . n A 1 55 ILE 55 55 55 ILE ILE R . n A 1 56 SER 56 56 56 SER SER R . n A 1 57 THR 57 57 57 THR THR R . n A 1 58 TYR 58 58 58 TYR TYR R . n A 1 59 ILE 59 59 59 ILE ILE R . n A 1 60 PHE 60 60 60 PHE PHE R . n A 1 61 LYS 61 61 61 LYS LYS R . n A 1 62 MET 62 62 62 MET MET R . n A 1 63 ARG 63 63 63 ARG ARG R . n A 1 64 PRO 64 64 64 PRO PRO R . n A 1 65 TRP 65 65 65 TRP TRP R . n A 1 66 LYS 66 66 66 LYS LYS R . n A 1 67 SER 67 67 67 SER SER R . n A 1 68 SER 68 68 68 SER SER R . n A 1 69 THR 69 69 69 THR THR R . n A 1 70 ILE 70 70 70 ILE ILE R . n A 1 71 ILE 71 71 71 ILE ILE R . n A 1 72 MET 72 72 72 MET MET R . n A 1 73 LEU 73 73 73 LEU LEU R . n A 1 74 ASN 74 74 74 ASN ASN R . n A 1 75 LEU 75 75 75 LEU LEU R . n A 1 76 ALA 76 76 76 ALA ALA R . n A 1 77 CYS 77 77 77 CYS CYS R . n A 1 78 THR 78 78 78 THR THR R . n A 1 79 ASP 79 79 79 ASP ASP R . n A 1 80 LEU 80 80 80 LEU LEU R . n A 1 81 LEU 81 81 81 LEU LEU R . n A 1 82 TYR 82 82 82 TYR TYR R . n A 1 83 LEU 83 83 83 LEU LEU R . n A 1 84 THR 84 84 84 THR THR R . n A 1 85 SER 85 85 85 SER SER R . n A 1 86 LEU 86 86 86 LEU LEU R . n A 1 87 PRO 87 87 87 PRO PRO R . n A 1 88 PHE 88 88 88 PHE PHE R . n A 1 89 LEU 89 89 89 LEU LEU R . n A 1 90 ILE 90 90 90 ILE ILE R . n A 1 91 HIS 91 91 91 HIS HIS R . n A 1 92 TYR 92 92 92 TYR TYR R . n A 1 93 TYR 93 93 93 TYR TYR R . n A 1 94 ALA 94 94 94 ALA ALA R . n A 1 95 SER 95 95 95 SER SER R . n A 1 96 GLY 96 96 96 GLY GLY R . n A 1 97 GLU 97 97 97 GLU GLU R . n A 1 98 ASN 98 98 98 ASN ASN R . n A 1 99 TRP 99 99 99 TRP TRP R . n A 1 100 ILE 100 100 100 ILE ILE R . n A 1 101 PHE 101 101 101 PHE PHE R . n A 1 102 GLY 102 102 102 GLY GLY R . n A 1 103 ASP 103 103 103 ASP ASP R . n A 1 104 PHE 104 104 104 PHE PHE R . n A 1 105 MET 105 105 105 MET MET R . n A 1 106 CYS 106 106 106 CYS CYS R . n A 1 107 LYS 107 107 107 LYS LYS R . n A 1 108 PHE 108 108 108 PHE PHE R . n A 1 109 ILE 109 109 109 ILE ILE R . n A 1 110 ARG 110 110 110 ARG ARG R . n A 1 111 PHE 111 111 111 PHE PHE R . n A 1 112 SER 112 112 112 SER SER R . n A 1 113 PHE 113 113 113 PHE PHE R . n A 1 114 HIS 114 114 114 HIS HIS R . n A 1 115 PHE 115 115 115 PHE PHE R . n A 1 116 ASN 116 116 116 ASN ASN R . n A 1 117 LEU 117 117 117 LEU LEU R . n A 1 118 TYR 118 118 118 TYR TYR R . n A 1 119 SER 119 119 119 SER SER R . n A 1 120 SER 120 120 120 SER SER R . n A 1 121 ILE 121 121 121 ILE ILE R . n A 1 122 LEU 122 122 122 LEU LEU R . n A 1 123 PHE 123 123 123 PHE PHE R . n A 1 124 LEU 124 124 124 LEU LEU R . n A 1 125 THR 125 125 125 THR THR R . n A 1 126 CYS 126 126 126 CYS CYS R . n A 1 127 PHE 127 127 127 PHE PHE R . n A 1 128 SER 128 128 128 SER SER R . n A 1 129 ILE 129 129 129 ILE ILE R . n A 1 130 PHE 130 130 130 PHE PHE R . n A 1 131 ARG 131 131 131 ARG ARG R . n A 1 132 TYR 132 132 132 TYR TYR R . n A 1 133 CYS 133 133 133 CYS CYS R . n A 1 134 VAL 134 134 134 VAL VAL R . n A 1 135 ILE 135 135 135 ILE ILE R . n A 1 136 ILE 136 136 136 ILE ILE R . n A 1 137 HIS 137 137 137 HIS HIS R . n A 1 138 PRO 138 138 138 PRO PRO R . n A 1 139 MET 139 139 139 MET MET R . n A 1 140 SER 140 140 140 SER SER R . n A 1 141 CYS 141 141 141 CYS CYS R . n A 1 142 PHE 142 142 142 PHE PHE R . n A 1 143 SER 143 143 143 SER SER R . n A 1 144 ILE 144 144 144 ILE ILE R . n A 1 145 HIS 145 145 145 HIS HIS R . n A 1 146 LYS 146 146 146 LYS LYS R . n A 1 147 THR 147 147 147 THR THR R . n A 1 148 ARG 148 148 148 ARG ARG R . n A 1 149 CYS 149 149 149 CYS CYS R . n A 1 150 ALA 150 150 150 ALA ALA R . n A 1 151 VAL 151 151 151 VAL VAL R . n A 1 152 VAL 152 152 152 VAL VAL R . n A 1 153 ALA 153 153 153 ALA ALA R . n A 1 154 CYS 154 154 154 CYS CYS R . n A 1 155 ALA 155 155 155 ALA ALA R . n A 1 156 VAL 156 156 156 VAL VAL R . n A 1 157 VAL 157 157 157 VAL VAL R . n A 1 158 TRP 158 158 158 TRP TRP R . n A 1 159 ILE 159 159 159 ILE ILE R . n A 1 160 ILE 160 160 160 ILE ILE R . n A 1 161 SER 161 161 161 SER SER R . n A 1 162 LEU 162 162 162 LEU LEU R . n A 1 163 VAL 163 163 163 VAL VAL R . n A 1 164 ALA 164 164 164 ALA ALA R . n A 1 165 VAL 165 165 165 VAL VAL R . n A 1 166 ILE 166 166 166 ILE ILE R . n A 1 167 PRO 167 167 167 PRO PRO R . n A 1 168 MET 168 168 168 MET MET R . n A 1 169 THR 169 169 169 THR THR R . n A 1 170 PHE 170 170 170 PHE PHE R . n A 1 171 LEU 171 171 171 LEU LEU R . n A 1 172 ILE 172 172 172 ILE ILE R . n A 1 173 THR 173 173 173 THR THR R . n A 1 174 SER 174 174 174 SER SER R . n A 1 175 THR 175 175 175 THR THR R . n A 1 176 ASN 176 176 176 ASN ASN R . n A 1 177 ARG 177 177 177 ARG ARG R . n A 1 178 THR 178 178 178 THR THR R . n A 1 179 ASN 179 179 179 ASN ASN R . n A 1 180 ARG 180 180 180 ARG ARG R . n A 1 181 SER 181 181 181 SER SER R . n A 1 182 ALA 182 182 182 ALA ALA R . n A 1 183 CYS 183 183 183 CYS CYS R . n A 1 184 LEU 184 184 184 LEU LEU R . n A 1 185 ASP 185 185 185 ASP ASP R . n A 1 186 LEU 186 186 186 LEU LEU R . n A 1 187 THR 187 187 187 THR THR R . n A 1 188 SER 188 188 188 SER SER R . n A 1 189 SER 189 189 189 SER SER R . n A 1 190 ASP 190 190 190 ASP ASP R . n A 1 191 GLU 191 191 191 GLU GLU R . n A 1 192 LEU 192 192 192 LEU LEU R . n A 1 193 ASN 193 193 193 ASN ASN R . n A 1 194 THR 194 194 194 THR THR R . n A 1 195 ILE 195 195 195 ILE ILE R . n A 1 196 LYS 196 196 196 LYS LYS R . n A 1 197 TRP 197 197 197 TRP TRP R . n A 1 198 TYR 198 198 198 TYR TYR R . n A 1 199 ASN 199 199 199 ASN ASN R . n A 1 200 LEU 200 200 200 LEU LEU R . n A 1 201 ILE 201 201 201 ILE ILE R . n A 1 202 LEU 202 202 202 LEU LEU R . n A 1 203 THR 203 203 203 THR THR R . n A 1 204 ALA 204 204 204 ALA ALA R . n A 1 205 THR 205 205 205 THR THR R . n A 1 206 THR 206 206 206 THR THR R . n A 1 207 PHE 207 207 207 PHE PHE R . n A 1 208 CYS 208 208 208 CYS CYS R . n A 1 209 LEU 209 209 209 LEU LEU R . n A 1 210 PRO 210 210 210 PRO PRO R . n A 1 211 LEU 211 211 211 LEU LEU R . n A 1 212 VAL 212 212 212 VAL VAL R . n A 1 213 ILE 213 213 213 ILE ILE R . n A 1 214 VAL 214 214 214 VAL VAL R . n A 1 215 THR 215 215 215 THR THR R . n A 1 216 LEU 216 216 216 LEU LEU R . n A 1 217 CYS 217 217 217 CYS CYS R . n A 1 218 TYR 218 218 218 TYR TYR R . n A 1 219 THR 219 219 219 THR THR R . n A 1 220 THR 220 220 220 THR THR R . n A 1 221 ILE 221 221 221 ILE ILE R . n A 1 222 ILE 222 222 222 ILE ILE R . n A 1 223 HIS 223 223 223 HIS HIS R . n A 1 224 THR 224 224 224 THR THR R . n A 1 225 LEU 225 225 225 LEU LEU R . n A 1 226 THR 226 226 226 THR THR R . n A 1 227 HIS 227 227 227 HIS HIS R . n A 1 228 GLY 228 228 228 GLY GLY R . n A 1 229 LEU 229 229 229 LEU LEU R . n A 1 230 GLN 230 230 230 GLN GLN R . n A 1 231 THR 231 231 231 THR THR R . n A 1 232 ASP 232 232 232 ASP ASP R . n A 1 233 SER 233 233 233 SER SER R . n A 1 234 CYS 234 234 234 CYS CYS R . n A 1 235 LEU 235 235 235 LEU LEU R . n A 1 236 LYS 236 236 236 LYS LYS R . n A 1 237 GLN 237 237 237 GLN GLN R . n A 1 238 LYS 238 238 238 LYS LYS R . n A 1 239 ALA 239 239 239 ALA ALA R . n A 1 240 ARG 240 240 240 ARG ARG R . n A 1 241 ARG 241 241 241 ARG ARG R . n A 1 242 LEU 242 242 242 LEU LEU R . n A 1 243 THR 243 243 243 THR THR R . n A 1 244 ILE 244 244 244 ILE ILE R . n A 1 245 LEU 245 245 245 LEU LEU R . n A 1 246 LEU 246 246 246 LEU LEU R . n A 1 247 LEU 247 247 247 LEU LEU R . n A 1 248 LEU 248 248 248 LEU LEU R . n A 1 249 ALA 249 249 249 ALA ALA R . n A 1 250 PHE 250 250 250 PHE PHE R . n A 1 251 TYR 251 251 251 TYR TYR R . n A 1 252 VAL 252 252 252 VAL VAL R . n A 1 253 CYS 253 253 253 CYS CYS R . n A 1 254 PHE 254 254 254 PHE PHE R . n A 1 255 LEU 255 255 255 LEU LEU R . n A 1 256 PRO 256 256 256 PRO PRO R . n A 1 257 PHE 257 257 257 PHE PHE R . n A 1 258 HIS 258 258 258 HIS HIS R . n A 1 259 ILE 259 259 259 ILE ILE R . n A 1 260 LEU 260 260 260 LEU LEU R . n A 1 261 ARG 261 261 261 ARG ARG R . n A 1 262 VAL 262 262 262 VAL VAL R . n A 1 263 ILE 263 263 263 ILE ILE R . n A 1 264 ARG 264 264 264 ARG ARG R . n A 1 265 ILE 265 265 265 ILE ILE R . n A 1 266 GLU 266 266 266 GLU GLU R . n A 1 267 SER 267 267 267 SER SER R . n A 1 268 ARG 268 268 268 ARG ARG R . n A 1 269 LEU 269 269 269 LEU LEU R . n A 1 270 LEU 270 270 270 LEU LEU R . n A 1 271 SER 271 271 271 SER SER R . n A 1 272 ILE 272 272 272 ILE ILE R . n A 1 273 SER 273 273 273 SER SER R . n A 1 274 CYS 274 274 274 CYS CYS R . n A 1 275 SER 275 275 275 SER SER R . n A 1 276 ILE 276 276 276 ILE ILE R . n A 1 277 GLU 277 277 277 GLU GLU R . n A 1 278 ASN 278 278 278 ASN ASN R . n A 1 279 GLN 279 279 279 GLN GLN R . n A 1 280 ILE 280 280 280 ILE ILE R . n A 1 281 HIS 281 281 281 HIS HIS R . n A 1 282 GLU 282 282 282 GLU GLU R . n A 1 283 ALA 283 283 283 ALA ALA R . n A 1 284 TYR 284 284 284 TYR TYR R . n A 1 285 ILE 285 285 285 ILE ILE R . n A 1 286 VAL 286 286 286 VAL VAL R . n A 1 287 SER 287 287 287 SER SER R . n A 1 288 ARG 288 288 288 ARG ARG R . n A 1 289 PRO 289 289 289 PRO PRO R . n A 1 290 LEU 290 290 290 LEU LEU R . n A 1 291 ALA 291 291 291 ALA ALA R . n A 1 292 ALA 292 292 292 ALA ALA R . n A 1 293 LEU 293 293 293 LEU LEU R . n A 1 294 ASN 294 294 294 ASN ASN R . n A 1 295 THR 295 295 295 THR THR R . n A 1 296 PHE 296 296 296 PHE PHE R . n A 1 297 GLY 297 297 297 GLY GLY R . n A 1 298 ASN 298 298 298 ASN ASN R . n A 1 299 LEU 299 299 299 LEU LEU R . n A 1 300 LEU 300 300 300 LEU LEU R . n A 1 301 LEU 301 301 301 LEU LEU R . n A 1 302 TYR 302 302 302 TYR TYR R . n A 1 303 VAL 303 303 303 VAL VAL R . n A 1 304 VAL 304 304 304 VAL VAL R . n A 1 305 VAL 305 305 305 VAL VAL R . n A 1 306 SER 306 306 306 SER SER R . n A 1 307 ASP 307 307 307 ASP ASP R . n A 1 308 ASN 308 308 308 ASN ASN R . n A 1 309 PHE 309 309 309 PHE PHE R . n A 1 310 GLN 310 310 310 GLN GLN R . n A 1 311 GLN 311 311 311 GLN GLN R . n A 1 312 ALA 312 312 312 ALA ALA R . n A 1 313 VAL 313 313 313 VAL VAL R . n A 1 314 CYS 314 314 ? ? ? R . n A 1 315 SER 315 315 ? ? ? R . n A 1 316 THR 316 316 ? ? ? R . n A 1 317 VAL 317 317 ? ? ? R . n A 1 318 ARG 318 318 ? ? ? R . n A 1 319 CYS 319 319 ? ? ? R . n A 1 320 LYS 320 320 ? ? ? R . n A 1 321 VAL 321 321 ? ? ? R . n A 1 322 SER 322 322 ? ? ? R . n A 1 323 GLY 323 323 ? ? ? R . n A 1 324 ASN 324 324 ? ? ? R . n A 1 325 LEU 325 325 ? ? ? R . n A 1 326 GLU 326 326 ? ? ? R . n A 1 327 GLN 327 327 ? ? ? R . n A 1 328 ALA 328 328 ? ? ? R . n A 1 329 LYS 329 329 ? ? ? R . n A 1 330 LYS 330 330 ? ? ? R . n A 1 331 ILE 331 331 ? ? ? R . n A 1 332 SER 332 332 ? ? ? R . n A 1 333 TYR 333 333 ? ? ? R . n A 1 334 SER 334 334 ? ? ? R . n A 1 335 ASN 335 335 ? ? ? R . n A 1 336 ASN 336 336 ? ? ? R . n A 1 337 PRO 337 337 ? ? ? R . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id SIN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id SIN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SIN 1 401 401 SIN SIN R . C 3 HOH 1 501 1 HOH HOH R . C 3 HOH 2 502 3 HOH HOH R . C 3 HOH 3 503 2 HOH HOH R . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 R ASN 98 ? CG ? A ASN 98 CG 2 1 Y 1 R ASN 98 ? OD1 ? A ASN 98 OD1 3 1 Y 1 R ASN 98 ? ND2 ? A ASN 98 ND2 4 1 Y 1 R LEU 270 ? CG ? A LEU 270 CG 5 1 Y 1 R LEU 270 ? CD1 ? A LEU 270 CD1 6 1 Y 1 R LEU 270 ? CD2 ? A LEU 270 CD2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9UXN _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9UXN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9UXN _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9UXN _struct.title 'Local refinement of Succinate bound OXGR1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9UXN _struct_keywords.text '2-oxoglutarate, AKG, 2-oxoglutarate receptor 1, OXGR1, cryo-EM, membrane protein, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code OXGR1_HUMAN _struct_ref.pdbx_db_accession Q96P68 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNEPLDYLANASDFPDYAAAFGNCTDENIPLKMHYLPVIYGIIFLVGFPGNAVVISTYIFKMRPWKSSTIIMLNLACTDL LYLTSLPFLIHYYASGENWIFGDFMCKFIRFSFHFNLYSSILFLTCFSIFRYCVIIHPMSCFSIHKTRCAVVACAVVWII SLVAVIPMTFLITSTNRTNRSACLDLTSSDELNTIKWYNLILTATTFCLPLVIVTLCYTTIIHTLTHGLQTDSCLKQKAR RLTILLLLAFYVCFLPFHILRVIRIESRLLSISCSIENQIHEAYIVSRPLAALNTFGNLLLYVVVSDNFQQAVCSTVRCK VSGNLEQAKKISYSNNP ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9UXN _struct_ref_seq.pdbx_strand_id R _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 337 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96P68 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 337 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 337 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 28 ? PHE A 60 ? ASN R 28 PHE R 60 1 ? 33 HELX_P HELX_P2 AA2 LYS A 66 ? SER A 95 ? LYS R 66 SER R 95 1 ? 30 HELX_P HELX_P3 AA3 GLY A 102 ? HIS A 137 ? GLY R 102 HIS R 137 1 ? 36 HELX_P HELX_P4 AA4 CYS A 141 ? HIS A 145 ? CYS R 141 HIS R 145 5 ? 5 HELX_P HELX_P5 AA5 LYS A 146 ? ILE A 166 ? LYS R 146 ILE R 166 1 ? 21 HELX_P HELX_P6 AA6 PRO A 167 ? PHE A 170 ? PRO R 167 PHE R 170 5 ? 4 HELX_P HELX_P7 AA7 GLU A 191 ? PHE A 207 ? GLU R 191 PHE R 207 1 ? 17 HELX_P HELX_P8 AA8 PHE A 207 ? GLY A 228 ? PHE R 207 GLY R 228 1 ? 22 HELX_P HELX_P9 AA9 SER A 233 ? LEU A 270 ? SER R 233 LEU R 270 1 ? 38 HELX_P HELX_P10 AB1 SER A 273 ? LEU A 293 ? SER R 273 LEU R 293 1 ? 21 HELX_P HELX_P11 AB2 LEU A 293 ? VAL A 303 ? LEU R 293 VAL R 303 1 ? 11 HELX_P HELX_P12 AB3 SER A 306 ? VAL A 313 ? SER R 306 VAL R 313 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 106 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 183 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id R _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 106 _struct_conn.ptnr2_auth_asym_id R _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 183 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.252 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 106 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 183 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id R _pdbx_modification_feature.auth_seq_id 106 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id R _pdbx_modification_feature.modified_residue_auth_seq_id 183 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 174 ? THR A 175 ? SER R 174 THR R 175 AA1 2 ALA A 182 ? CYS A 183 ? ALA R 182 CYS R 183 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 175 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id R _pdbx_struct_sheet_hbond.range_1_auth_seq_id 175 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ALA _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 182 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ALA _pdbx_struct_sheet_hbond.range_2_auth_asym_id R _pdbx_struct_sheet_hbond.range_2_auth_seq_id 182 # _pdbx_entry_details.entry_id 9UXN _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE R 207 ? ? -120.42 -54.38 2 1 VAL R 303 ? ? -123.41 -57.29 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9UXN _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9UXN _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.70 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 360330 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Succinate bound OXGR1' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9UXN _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TALOS ARCTICA' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'DARK FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9UXN _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9UXN _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 R MET 1 ? A MET 1 2 1 Y 1 R ASN 2 ? A ASN 2 3 1 Y 1 R GLU 3 ? A GLU 3 4 1 Y 1 R PRO 4 ? A PRO 4 5 1 Y 1 R LEU 5 ? A LEU 5 6 1 Y 1 R ASP 6 ? A ASP 6 7 1 Y 1 R TYR 7 ? A TYR 7 8 1 Y 1 R LEU 8 ? A LEU 8 9 1 Y 1 R ALA 9 ? A ALA 9 10 1 Y 1 R ASN 10 ? A ASN 10 11 1 Y 1 R ALA 11 ? A ALA 11 12 1 Y 1 R SER 12 ? A SER 12 13 1 Y 1 R ASP 13 ? A ASP 13 14 1 Y 1 R PHE 14 ? A PHE 14 15 1 Y 1 R PRO 15 ? A PRO 15 16 1 Y 1 R ASP 16 ? A ASP 16 17 1 Y 1 R TYR 17 ? A TYR 17 18 1 Y 1 R ALA 18 ? A ALA 18 19 1 Y 1 R ALA 19 ? A ALA 19 20 1 Y 1 R ALA 20 ? A ALA 20 21 1 Y 1 R PHE 21 ? A PHE 21 22 1 Y 1 R GLY 22 ? A GLY 22 23 1 Y 1 R ASN 23 ? A ASN 23 24 1 Y 1 R CYS 24 ? A CYS 24 25 1 Y 1 R THR 25 ? A THR 25 26 1 Y 1 R ASP 26 ? A ASP 26 27 1 Y 1 R GLU 27 ? A GLU 27 28 1 Y 1 R CYS 314 ? A CYS 314 29 1 Y 1 R SER 315 ? A SER 315 30 1 Y 1 R THR 316 ? A THR 316 31 1 Y 1 R VAL 317 ? A VAL 317 32 1 Y 1 R ARG 318 ? A ARG 318 33 1 Y 1 R CYS 319 ? A CYS 319 34 1 Y 1 R LYS 320 ? A LYS 320 35 1 Y 1 R VAL 321 ? A VAL 321 36 1 Y 1 R SER 322 ? A SER 322 37 1 Y 1 R GLY 323 ? A GLY 323 38 1 Y 1 R ASN 324 ? A ASN 324 39 1 Y 1 R LEU 325 ? A LEU 325 40 1 Y 1 R GLU 326 ? A GLU 326 41 1 Y 1 R GLN 327 ? A GLN 327 42 1 Y 1 R ALA 328 ? A ALA 328 43 1 Y 1 R LYS 329 ? A LYS 329 44 1 Y 1 R LYS 330 ? A LYS 330 45 1 Y 1 R ILE 331 ? A ILE 331 46 1 Y 1 R SER 332 ? A SER 332 47 1 Y 1 R TYR 333 ? A TYR 333 48 1 Y 1 R SER 334 ? A SER 334 49 1 Y 1 R ASN 335 ? A ASN 335 50 1 Y 1 R ASN 336 ? A ASN 336 51 1 Y 1 R PRO 337 ? A PRO 337 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 SIN C1 C N N 304 SIN O1 O N N 305 SIN O2 O N N 306 SIN C2 C N N 307 SIN C3 C N N 308 SIN C4 C N N 309 SIN O3 O N N 310 SIN O4 O N N 311 SIN HO2 H N N 312 SIN H21 H N N 313 SIN H22 H N N 314 SIN H31 H N N 315 SIN H32 H N N 316 SIN HO4 H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TRP N N N N 335 TRP CA C N S 336 TRP C C N N 337 TRP O O N N 338 TRP CB C N N 339 TRP CG C Y N 340 TRP CD1 C Y N 341 TRP CD2 C Y N 342 TRP NE1 N Y N 343 TRP CE2 C Y N 344 TRP CE3 C Y N 345 TRP CZ2 C Y N 346 TRP CZ3 C Y N 347 TRP CH2 C Y N 348 TRP OXT O N N 349 TRP H H N N 350 TRP H2 H N N 351 TRP HA H N N 352 TRP HB2 H N N 353 TRP HB3 H N N 354 TRP HD1 H N N 355 TRP HE1 H N N 356 TRP HE3 H N N 357 TRP HZ2 H N N 358 TRP HZ3 H N N 359 TRP HH2 H N N 360 TRP HXT H N N 361 TYR N N N N 362 TYR CA C N S 363 TYR C C N N 364 TYR O O N N 365 TYR CB C N N 366 TYR CG C Y N 367 TYR CD1 C Y N 368 TYR CD2 C Y N 369 TYR CE1 C Y N 370 TYR CE2 C Y N 371 TYR CZ C Y N 372 TYR OH O N N 373 TYR OXT O N N 374 TYR H H N N 375 TYR H2 H N N 376 TYR HA H N N 377 TYR HB2 H N N 378 TYR HB3 H N N 379 TYR HD1 H N N 380 TYR HD2 H N N 381 TYR HE1 H N N 382 TYR HE2 H N N 383 TYR HH H N N 384 TYR HXT H N N 385 VAL N N N N 386 VAL CA C N S 387 VAL C C N N 388 VAL O O N N 389 VAL CB C N N 390 VAL CG1 C N N 391 VAL CG2 C N N 392 VAL OXT O N N 393 VAL H H N N 394 VAL H2 H N N 395 VAL HA H N N 396 VAL HB H N N 397 VAL HG11 H N N 398 VAL HG12 H N N 399 VAL HG13 H N N 400 VAL HG21 H N N 401 VAL HG22 H N N 402 VAL HG23 H N N 403 VAL HXT H N N 404 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SIN C1 O1 doub N N 290 SIN C1 O2 sing N N 291 SIN C1 C2 sing N N 292 SIN O2 HO2 sing N N 293 SIN C2 C3 sing N N 294 SIN C2 H21 sing N N 295 SIN C2 H22 sing N N 296 SIN C3 C4 sing N N 297 SIN C3 H31 sing N N 298 SIN C3 H32 sing N N 299 SIN C4 O3 doub N N 300 SIN C4 O4 sing N N 301 SIN O4 HO4 sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # _em_admin.current_status REL _em_admin.deposition_date 2025-05-14 _em_admin.deposition_site PDBJ _em_admin.entry_id 9UXN _em_admin.last_update 2026-05-27 _em_admin.map_release_date 2026-05-27 _em_admin.title 'Local refinement of Succinate bound OXGR1' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 7108 _em_entity_assembly_recombinant.organism 'Spodoptera frugiperda' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? ? ? ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX 1.20.1_4487 ? 'IMAGE ACQUISITION' ? 3 ? ? 1 ? ? ? MASKING ? 4 ? ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? ? 'MODEL FITTING' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9UXN _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #