HEADER LYASE 26-MAY-25 9V60 TITLE CRYSTAL STRUCTURE OF MYRCENE SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYRCENE SYNTHASE TPS3FN, CHLOROPLASTIC; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TERPENE SYNTHASE 3FN,CSTPS3FN; COMPND 5 EC: 4.2.3.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANNABIS SATIVA; SOURCE 3 ORGANISM_TAXID: 3483; SOURCE 4 GENE: TPS3FN; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MYRCENE SYNTHASE, MYRCENE, MONOTERPENE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR T.SONG,H.JIANG,J.XIAO REVDAT 1 03-JUN-26 9V60 0 JRNL AUTH T.SONG,H.JIANG,J.XIAO JRNL TITL STRUCTURAL AND MECHANISTIC INSIGHTS INTO TWO PROTOTYPICAL JRNL TITL 2 MONOTERPENE SYNTHASES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 52564 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.820 REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.9900 - 4.3600 0.99 3721 151 0.1792 0.2116 REMARK 3 2 4.3600 - 3.9600 0.99 3679 145 0.1886 0.2224 REMARK 3 3 3.9600 - 3.6800 0.99 3627 145 0.2045 0.2270 REMARK 3 4 3.6800 - 3.4600 0.99 3636 148 0.2200 0.2491 REMARK 3 5 3.4600 - 3.2900 0.99 3600 140 0.2522 0.3055 REMARK 3 6 3.2900 - 3.1500 0.98 3624 140 0.2583 0.3484 REMARK 3 7 3.1500 - 3.0200 0.98 3573 144 0.2616 0.2924 REMARK 3 8 3.0200 - 2.9200 0.97 3545 138 0.2786 0.3367 REMARK 3 9 2.9200 - 2.8300 0.97 3544 137 0.2897 0.3610 REMARK 3 10 2.7500 - 2.6800 0.96 3489 137 0.2788 0.3026 REMARK 3 11 2.6800 - 2.6100 0.95 3442 137 0.2828 0.3235 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 9140 REMARK 3 ANGLE : 0.615 12340 REMARK 3 CHIRALITY : 0.037 1343 REMARK 3 PLANARITY : 0.007 1561 REMARK 3 DIHEDRAL : 5.668 1167 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 60:113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 97.771 11.564 95.228 REMARK 3 T TENSOR REMARK 3 T11: 0.3742 T22: 0.3276 REMARK 3 T33: 0.3094 T12: -0.0187 REMARK 3 T13: 0.0113 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 0.1216 L22: 0.3179 REMARK 3 L33: 0.3181 L12: -0.2364 REMARK 3 L13: -0.0064 L23: -0.0063 REMARK 3 S TENSOR REMARK 3 S11: -0.0542 S12: 0.0039 S13: -0.0335 REMARK 3 S21: 0.0133 S22: -0.0043 S23: 0.0828 REMARK 3 S31: 0.0323 S32: 0.2424 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 114:157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 100.873 27.517 90.814 REMARK 3 T TENSOR REMARK 3 T11: 0.3730 T22: 0.3294 REMARK 3 T33: 0.3489 T12: -0.0413 REMARK 3 T13: 0.0212 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.2831 L22: 0.4008 REMARK 3 L33: 0.4355 L12: -0.1583 REMARK 3 L13: 0.1363 L23: -0.4749 REMARK 3 S TENSOR REMARK 3 S11: -0.0597 S12: -0.1679 S13: 0.3009 REMARK 3 S21: 0.0120 S22: 0.0292 S23: -0.1461 REMARK 3 S31: -0.3685 S32: 0.0822 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 158:264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 96.537 14.561 70.415 REMARK 3 T TENSOR REMARK 3 T11: 0.4008 T22: 0.3295 REMARK 3 T33: 0.3194 T12: -0.0201 REMARK 3 T13: -0.0039 T23: 0.0223 REMARK 3 L TENSOR REMARK 3 L11: -0.1085 L22: 0.5560 REMARK 3 L33: 0.1844 L12: -0.0355 REMARK 3 L13: -0.6282 L23: 0.0376 REMARK 3 S TENSOR REMARK 3 S11: -0.0898 S12: 0.1377 S13: -0.0255 REMARK 3 S21: -0.1565 S22: -0.0313 S23: -0.1157 REMARK 3 S31: 0.0149 S32: 0.1530 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 265:347 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.456 14.360 66.704 REMARK 3 T TENSOR REMARK 3 T11: 0.4341 T22: 0.3003 REMARK 3 T33: 0.4113 T12: -0.0089 REMARK 3 T13: -0.1053 T23: -0.0709 REMARK 3 L TENSOR REMARK 3 L11: 0.3582 L22: 1.1958 REMARK 3 L33: 0.7704 L12: 0.0847 REMARK 3 L13: 0.0981 L23: 0.5564 REMARK 3 S TENSOR REMARK 3 S11: 0.2466 S12: 0.0077 S13: -0.1086 REMARK 3 S21: -0.4856 S22: -0.2618 S23: 0.2357 REMARK 3 S31: 0.0285 S32: -0.1316 S33: -0.0004 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 348:474 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.968 21.050 77.714 REMARK 3 T TENSOR REMARK 3 T11: 0.3796 T22: 0.2890 REMARK 3 T33: 0.3543 T12: -0.0227 REMARK 3 T13: -0.0563 T23: -0.0546 REMARK 3 L TENSOR REMARK 3 L11: 0.7937 L22: 0.2822 REMARK 3 L33: 0.4338 L12: 0.2132 REMARK 3 L13: 0.4097 L23: 0.1829 REMARK 3 S TENSOR REMARK 3 S11: -0.0598 S12: -0.0197 S13: 0.1267 REMARK 3 S21: -0.1824 S22: -0.0618 S23: 0.1183 REMARK 3 S31: 0.0820 S32: -0.1751 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 475:540 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.713 24.962 80.105 REMARK 3 T TENSOR REMARK 3 T11: 0.4027 T22: 0.3398 REMARK 3 T33: 0.3626 T12: -0.0339 REMARK 3 T13: -0.0138 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.9857 L22: 0.5535 REMARK 3 L33: 0.5759 L12: -0.2863 REMARK 3 L13: -0.0430 L23: 0.6066 REMARK 3 S TENSOR REMARK 3 S11: 0.0351 S12: -0.0846 S13: 0.1954 REMARK 3 S21: -0.1676 S22: -0.0169 S23: 0.0277 REMARK 3 S31: -0.0504 S32: -0.1504 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 541:554 ) REMARK 3 ORIGIN FOR THE GROUP (A): 90.059 9.782 61.510 REMARK 3 T TENSOR REMARK 3 T11: 0.7100 T22: 0.6393 REMARK 3 T33: 0.6484 T12: -0.0313 REMARK 3 T13: 0.1936 T23: 0.1088 REMARK 3 L TENSOR REMARK 3 L11: 0.0562 L22: 0.0383 REMARK 3 L33: 0.0876 L12: 0.0700 REMARK 3 L13: -0.0086 L23: -0.0374 REMARK 3 S TENSOR REMARK 3 S11: 0.1825 S12: 0.9367 S13: 0.0419 REMARK 3 S21: -0.2572 S22: 0.0311 S23: -0.3175 REMARK 3 S31: -0.5175 S32: 0.2235 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9V60 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 30-MAY-25. REMARK 100 THE DEPOSITION ID IS D_1300059747. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53747 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.610 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 18.60 REMARK 200 R MERGE (I) : 0.21200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.40 REMARK 200 R MERGE FOR SHELL (I) : 1.72400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01 M MAGNESIUM CHLORIDE HEXAHYDRATE, REMARK 280 0.05 M MES MONOHYDRATE PH 5.6, 1.8 M LITHIUM SULFATE MONOHYDRATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 129.16000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.58000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 64.58000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 129.16000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 124.82600 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 129.16000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 PRO A 2 REMARK 465 PRO A 3 REMARK 465 ASN A 530 REMARK 465 GLY A 531 REMARK 465 ASP A 532 REMARK 465 GLY A 533 REMARK 465 HIS A 534 REMARK 465 GLY A 535 REMARK 465 SER A 536 REMARK 465 ILE A 555 REMARK 465 PRO A 556 REMARK 465 LYS A 557 REMARK 465 GLU B 1 REMARK 465 PRO B 2 REMARK 465 PRO B 3 REMARK 465 ILE B 171 REMARK 465 GLU B 172 REMARK 465 ASN B 173 REMARK 465 GLU B 174 REMARK 465 GLU B 175 REMARK 465 GLU B 176 REMARK 465 LYS B 177 REMARK 465 LYS B 178 REMARK 465 ILE B 179 REMARK 465 LEU B 180 REMARK 465 LEU B 181 REMARK 465 SER B 457 REMARK 465 SER B 458 REMARK 465 ASP B 459 REMARK 465 GLU B 460 REMARK 465 LEU B 461 REMARK 465 ASN B 462 REMARK 465 ARG B 463 REMARK 465 ASN B 530 REMARK 465 GLY B 531 REMARK 465 ASP B 532 REMARK 465 GLY B 533 REMARK 465 HIS B 534 REMARK 465 GLY B 535 REMARK 465 SER B 536 REMARK 465 ILE B 555 REMARK 465 PRO B 556 REMARK 465 LYS B 557 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 263 CG CD CE NZ REMARK 470 LYS B 221 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 422 C - N - CD ANGL. DEV. = -17.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 17 54.22 -92.94 REMARK 500 SER A 21 -8.45 73.06 REMARK 500 ILE A 218 -53.60 -120.88 REMARK 500 GLN A 223 -21.02 70.99 REMARK 500 LEU A 229 41.59 -81.59 REMARK 500 PHE A 230 -43.82 -136.20 REMARK 500 PHE A 266 124.09 -170.28 REMARK 500 ARG A 268 -6.93 73.52 REMARK 500 GLN A 432 47.79 37.90 REMARK 500 SER A 541 40.00 -81.23 REMARK 500 LYS A 542 -30.08 -137.32 REMARK 500 ILE A 550 -61.76 -90.05 REMARK 500 LEU B 13 79.78 -65.34 REMARK 500 SER B 14 -105.40 -79.45 REMARK 500 THR B 15 -61.04 -148.35 REMARK 500 GLN B 16 64.07 62.08 REMARK 500 ASN B 89 41.32 -103.13 REMARK 500 ILE B 158 -55.97 86.42 REMARK 500 ASP B 269 97.66 -65.50 REMARK 500 GLU B 286 -9.41 -59.62 REMARK 500 GLU B 397 -27.05 67.60 REMARK 500 SER B 541 44.06 -81.79 REMARK 500 LYS B 542 -36.70 -137.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 421 PRO A 422 110.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG B 256 -10.97 REMARK 500 REMARK 500 REMARK: NULL DBREF1 9V60 A 1 557 UNP TS3FN_CANSA DBREF2 9V60 A A0A1V0QSF8 76 632 DBREF1 9V60 B 1 557 UNP TS3FN_CANSA DBREF2 9V60 B A0A1V0QSF8 76 632 SEQRES 1 A 557 GLU PRO PRO ILE TRP SER PHE ASP TYR ILE GLN SER LEU SEQRES 2 A 557 SER THR GLN TYR LYS GLY GLU SER TYR THR ARG GLN LEU SEQRES 3 A 557 ASN LYS LEU LYS LYS GLU VAL LYS ARG MET LEU LEU ARG SEQRES 4 A 557 MET GLU ILE ASN SER LEU ALA LEU LEU GLU LEU ILE ASP SEQRES 5 A 557 THR LEU GLN ARG LEU GLY ILE SER TYR HIS PHE LYS ASN SEQRES 6 A 557 GLU ILE ASN THR ILE LEU LYS LYS LYS TYR ASN ASP ASN SEQRES 7 A 557 TYR ILE ASN ASN ASN ILE ILE THR ASN PRO ASN TYR ASN SEQRES 8 A 557 ASN LEU TYR ALA THR ALA LEU GLU PHE ARG LEU LEU ARG SEQRES 9 A 557 GLN HIS GLY TYR THR VAL PRO GLN GLU ILE PHE ASN ALA SEQRES 10 A 557 PHE LYS ASP LYS ARG GLY LYS PHE LYS THR SER LEU SER SEQRES 11 A 557 ASP ASP ILE MET GLY VAL LEU CYS LEU TYR GLU ALA SER SEQRES 12 A 557 PHE TYR ALA MET LYS HIS GLU ASN ILE LEU GLU GLU ALA SEQRES 13 A 557 ARG ILE PHE SER THR LYS CYS LEU LYS LYS TYR MET GLU SEQRES 14 A 557 LYS ILE GLU ASN GLU GLU GLU LYS LYS ILE LEU LEU LEU SEQRES 15 A 557 ASN ASP ASN ASN ILE ASN SER ASN LEU LEU LEU ILE ASN SEQRES 16 A 557 HIS ALA PHE GLU LEU PRO LEU HIS TRP ARG ILE THR ARG SEQRES 17 A 557 SER GLU ALA ARG TRP PHE ILE ASP GLU ILE TYR GLU LYS SEQRES 18 A 557 LYS GLN ASP MET ASN SER THR LEU PHE GLU PHE ALA LYS SEQRES 19 A 557 LEU ASP PHE ASN ILE VAL GLN SER THR HIS GLN GLU ASP SEQRES 20 A 557 LEU GLN HIS LEU SER ARG TRP TRP ARG ASP CYS LYS LEU SEQRES 21 A 557 GLY GLY LYS LEU ASN PHE ALA ARG ASP ARG LEU MET GLU SEQRES 22 A 557 ALA PHE LEU TRP ASP VAL GLY LEU LYS PHE GLU GLY GLU SEQRES 23 A 557 PHE SER TYR PHE ARG ARG THR ASN ALA ARG LEU PHE VAL SEQRES 24 A 557 LEU ILE THR ILE ILE ASP ASP ILE TYR ASP VAL TYR GLY SEQRES 25 A 557 THR LEU GLU GLU LEU GLU LEU PHE THR SER ALA VAL GLU SEQRES 26 A 557 ARG TRP ASP VAL LYS LEU ILE ASN GLU LEU PRO ASP TYR SEQRES 27 A 557 MET LYS MET PRO PHE PHE VAL LEU HIS ASN THR ILE ASN SEQRES 28 A 557 GLU MET GLY PHE ASP VAL LEU VAL GLU GLN ASN PHE VAL SEQRES 29 A 557 ASN ILE GLU TYR LEU LYS LYS SER TRP VAL ASP LEU CYS SEQRES 30 A 557 LYS CYS TYR LEU GLN GLU ALA LYS TRP TYR TYR SER GLY SEQRES 31 A 557 TYR GLN PRO THR LEU GLU GLU TYR THR GLU LEU GLY TRP SEQRES 32 A 557 LEU SER ILE GLY ALA SER VAL ILE LEU MET HIS ALA TYR SEQRES 33 A 557 PHE CYS PHE THR ASN PRO ILE THR LYS GLN ASP LEU LYS SEQRES 34 A 557 SER LEU GLN LEU GLN HIS HIS TYR PRO ASN ILE ILE LYS SEQRES 35 A 557 GLN ALA CYS LEU ILE THR ARG LEU ALA ASP ASP LEU GLY SEQRES 36 A 557 THR SER SER ASP GLU LEU ASN ARG GLY ASP VAL PRO LYS SEQRES 37 A 557 SER ILE GLN CYS TYR MET TYR ASP ASN ASN ALA THR GLU SEQRES 38 A 557 ASP GLU ALA ARG GLU HIS ILE LYS PHE LEU ILE SER GLU SEQRES 39 A 557 THR TRP LYS ASP MET ASN LYS LYS ASP GLU ASP GLU SER SEQRES 40 A 557 CYS LEU SER GLU ASN PHE VAL GLU VAL CYS LYS ASN MET SEQRES 41 A 557 ALA ARG THR ALA LEU PHE ILE TYR GLU ASN GLY ASP GLY SEQRES 42 A 557 HIS GLY SER GLN ASN SER LEU SER LYS GLU ARG ILE SER SEQRES 43 A 557 THR LEU ILE ILE THR PRO ILE ASN ILE PRO LYS SEQRES 1 B 557 GLU PRO PRO ILE TRP SER PHE ASP TYR ILE GLN SER LEU SEQRES 2 B 557 SER THR GLN TYR LYS GLY GLU SER TYR THR ARG GLN LEU SEQRES 3 B 557 ASN LYS LEU LYS LYS GLU VAL LYS ARG MET LEU LEU ARG SEQRES 4 B 557 MET GLU ILE ASN SER LEU ALA LEU LEU GLU LEU ILE ASP SEQRES 5 B 557 THR LEU GLN ARG LEU GLY ILE SER TYR HIS PHE LYS ASN SEQRES 6 B 557 GLU ILE ASN THR ILE LEU LYS LYS LYS TYR ASN ASP ASN SEQRES 7 B 557 TYR ILE ASN ASN ASN ILE ILE THR ASN PRO ASN TYR ASN SEQRES 8 B 557 ASN LEU TYR ALA THR ALA LEU GLU PHE ARG LEU LEU ARG SEQRES 9 B 557 GLN HIS GLY TYR THR VAL PRO GLN GLU ILE PHE ASN ALA SEQRES 10 B 557 PHE LYS ASP LYS ARG GLY LYS PHE LYS THR SER LEU SER SEQRES 11 B 557 ASP ASP ILE MET GLY VAL LEU CYS LEU TYR GLU ALA SER SEQRES 12 B 557 PHE TYR ALA MET LYS HIS GLU ASN ILE LEU GLU GLU ALA SEQRES 13 B 557 ARG ILE PHE SER THR LYS CYS LEU LYS LYS TYR MET GLU SEQRES 14 B 557 LYS ILE GLU ASN GLU GLU GLU LYS LYS ILE LEU LEU LEU SEQRES 15 B 557 ASN ASP ASN ASN ILE ASN SER ASN LEU LEU LEU ILE ASN SEQRES 16 B 557 HIS ALA PHE GLU LEU PRO LEU HIS TRP ARG ILE THR ARG SEQRES 17 B 557 SER GLU ALA ARG TRP PHE ILE ASP GLU ILE TYR GLU LYS SEQRES 18 B 557 LYS GLN ASP MET ASN SER THR LEU PHE GLU PHE ALA LYS SEQRES 19 B 557 LEU ASP PHE ASN ILE VAL GLN SER THR HIS GLN GLU ASP SEQRES 20 B 557 LEU GLN HIS LEU SER ARG TRP TRP ARG ASP CYS LYS LEU SEQRES 21 B 557 GLY GLY LYS LEU ASN PHE ALA ARG ASP ARG LEU MET GLU SEQRES 22 B 557 ALA PHE LEU TRP ASP VAL GLY LEU LYS PHE GLU GLY GLU SEQRES 23 B 557 PHE SER TYR PHE ARG ARG THR ASN ALA ARG LEU PHE VAL SEQRES 24 B 557 LEU ILE THR ILE ILE ASP ASP ILE TYR ASP VAL TYR GLY SEQRES 25 B 557 THR LEU GLU GLU LEU GLU LEU PHE THR SER ALA VAL GLU SEQRES 26 B 557 ARG TRP ASP VAL LYS LEU ILE ASN GLU LEU PRO ASP TYR SEQRES 27 B 557 MET LYS MET PRO PHE PHE VAL LEU HIS ASN THR ILE ASN SEQRES 28 B 557 GLU MET GLY PHE ASP VAL LEU VAL GLU GLN ASN PHE VAL SEQRES 29 B 557 ASN ILE GLU TYR LEU LYS LYS SER TRP VAL ASP LEU CYS SEQRES 30 B 557 LYS CYS TYR LEU GLN GLU ALA LYS TRP TYR TYR SER GLY SEQRES 31 B 557 TYR GLN PRO THR LEU GLU GLU TYR THR GLU LEU GLY TRP SEQRES 32 B 557 LEU SER ILE GLY ALA SER VAL ILE LEU MET HIS ALA TYR SEQRES 33 B 557 PHE CYS PHE THR ASN PRO ILE THR LYS GLN ASP LEU LYS SEQRES 34 B 557 SER LEU GLN LEU GLN HIS HIS TYR PRO ASN ILE ILE LYS SEQRES 35 B 557 GLN ALA CYS LEU ILE THR ARG LEU ALA ASP ASP LEU GLY SEQRES 36 B 557 THR SER SER ASP GLU LEU ASN ARG GLY ASP VAL PRO LYS SEQRES 37 B 557 SER ILE GLN CYS TYR MET TYR ASP ASN ASN ALA THR GLU SEQRES 38 B 557 ASP GLU ALA ARG GLU HIS ILE LYS PHE LEU ILE SER GLU SEQRES 39 B 557 THR TRP LYS ASP MET ASN LYS LYS ASP GLU ASP GLU SER SEQRES 40 B 557 CYS LEU SER GLU ASN PHE VAL GLU VAL CYS LYS ASN MET SEQRES 41 B 557 ALA ARG THR ALA LEU PHE ILE TYR GLU ASN GLY ASP GLY SEQRES 42 B 557 HIS GLY SER GLN ASN SER LEU SER LYS GLU ARG ILE SER SEQRES 43 B 557 THR LEU ILE ILE THR PRO ILE ASN ILE PRO LYS HET MG B 601 1 HET MG B 602 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *95(H2 O) HELIX 1 AA1 SER A 6 SER A 12 1 7 HELIX 2 AA2 THR A 15 GLY A 19 5 5 HELIX 3 AA3 SER A 21 ARG A 39 1 19 HELIX 4 AA4 SER A 44 LEU A 57 1 14 HELIX 5 AA5 ILE A 59 HIS A 62 5 4 HELIX 6 AA6 PHE A 63 TYR A 79 1 17 HELIX 7 AA7 ASN A 92 HIS A 106 1 15 HELIX 8 AA8 PRO A 111 LYS A 119 5 9 HELIX 9 AA9 LYS A 126 ASP A 131 5 6 HELIX 10 AB1 ASP A 132 PHE A 144 1 13 HELIX 11 AB2 GLU A 150 ASN A 173 1 24 HELIX 12 AB3 GLU A 174 ASN A 183 1 10 HELIX 13 AB4 ASP A 184 LEU A 200 1 17 HELIX 14 AB5 PRO A 201 ARG A 205 5 5 HELIX 15 AB6 ILE A 206 ILE A 218 1 13 HELIX 16 AB7 SER A 227 CYS A 258 1 32 HELIX 17 AB8 ARG A 270 LYS A 282 1 13 HELIX 18 AB9 GLU A 284 GLU A 286 5 3 HELIX 19 AC1 PHE A 287 VAL A 310 1 24 HELIX 20 AC2 THR A 313 TRP A 327 1 15 HELIX 21 AC3 LEU A 331 LEU A 335 5 5 HELIX 22 AC4 PRO A 336 TYR A 338 5 3 HELIX 23 AC5 MET A 339 ASN A 362 1 24 HELIX 24 AC6 ASN A 365 GLY A 390 1 26 HELIX 25 AC7 THR A 394 ILE A 406 1 13 HELIX 26 AC8 GLY A 407 PHE A 419 1 13 HELIX 27 AC9 THR A 424 GLN A 432 1 9 HELIX 28 AD1 PRO A 438 GLY A 455 1 18 HELIX 29 AD2 SER A 458 ARG A 463 1 6 HELIX 30 AD3 LYS A 468 ASN A 478 1 11 HELIX 31 AD4 THR A 480 LYS A 501 1 22 HELIX 32 AD5 ASP A 503 SER A 507 5 5 HELIX 33 AD6 SER A 510 GLU A 529 1 20 HELIX 34 AD7 SER A 539 ILE A 549 1 11 HELIX 35 AD8 ASP B 8 LEU B 13 1 6 HELIX 36 AD9 SER B 21 MET B 40 1 20 HELIX 37 AE1 SER B 44 LEU B 57 1 14 HELIX 38 AE2 ILE B 59 HIS B 62 5 4 HELIX 39 AE3 PHE B 63 TYR B 79 1 17 HELIX 40 AE4 ASN B 92 HIS B 106 1 15 HELIX 41 AE5 PRO B 111 LYS B 119 5 9 HELIX 42 AE6 LYS B 126 ASP B 131 5 6 HELIX 43 AE7 ASP B 132 PHE B 144 1 13 HELIX 44 AE8 GLU B 150 GLU B 169 1 20 HELIX 45 AE9 ASP B 184 LEU B 200 1 17 HELIX 46 AF1 PRO B 201 ARG B 205 5 5 HELIX 47 AF2 ILE B 206 ILE B 218 1 13 HELIX 48 AF3 TYR B 219 LYS B 222 5 4 HELIX 49 AF4 ASN B 226 CYS B 258 1 33 HELIX 50 AF5 ARG B 270 LYS B 282 1 13 HELIX 51 AF6 GLU B 284 GLU B 286 5 3 HELIX 52 AF7 PHE B 287 VAL B 310 1 24 HELIX 53 AF8 THR B 313 ARG B 326 1 14 HELIX 54 AF9 ASP B 328 LEU B 335 5 8 HELIX 55 AG1 PRO B 336 TYR B 338 5 3 HELIX 56 AG2 MET B 339 ASN B 362 1 24 HELIX 57 AG3 ASN B 365 GLY B 390 1 26 HELIX 58 AG4 THR B 394 ILE B 406 1 13 HELIX 59 AG5 GLY B 407 PHE B 419 1 13 HELIX 60 AG6 THR B 424 GLN B 432 1 9 HELIX 61 AG7 PRO B 438 GLY B 455 1 18 HELIX 62 AG8 LYS B 468 ASN B 478 1 11 HELIX 63 AG9 THR B 480 LYS B 501 1 22 HELIX 64 AH1 ASP B 503 SER B 507 5 5 HELIX 65 AH2 SER B 510 GLU B 529 1 20 HELIX 66 AH3 SER B 539 ILE B 549 1 11 CISPEP 1 ASN B 421 PRO B 422 0 3.76 CRYST1 124.826 124.826 193.740 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008011 0.004625 0.000000 0.00000 SCALE2 0.000000 0.009250 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005162 0.00000 MASTER 464 0 2 66 0 0 0 6 9041 2 0 86 END