data_9VA0 # _entry.id 9VA0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.409 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9VA0 pdb_00009va0 10.2210/pdb9va0/pdb WWPDB D_1300060104 ? ? BMRB 36761 ? 10.13018/BMR36761 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-02-11 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 9VA0 _pdbx_database_status.recvd_initial_deposition_date 2025-06-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR structures of hTERT DNA G-quadruplexes (G4s) in complex with small molecule CPT-11' _pdbx_database_related.db_id 36761 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email leizeng@jlu.edu.cn _pdbx_contact_author.name_first Zeng _pdbx_contact_author.name_last Lei _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4236-6735 # _audit_author.name 'Zeng, L.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Dual Targeting of Topoisomerase I and DNA G-quadruplexes Enhances Senescence Response and Chemosensitivity in Colorectal Cancer Cells ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, Y.' 1 ? primary 'Ji, D.' 2 ? primary 'Jia, Y.' 3 ? primary 'Liang, Y.' 4 ? primary 'Wei, E.' 5 ? primary 'Gao, C.' 6 ? primary 'Li, Y.' 7 ? primary 'Zeng, C.' 8 ? primary 'Wang, L.' 9 ? primary 'Wang, C.' 10 ? primary 'Guo, Z.' 11 ? primary 'Zhang, Y.' 12 ? primary 'Zhou, M.-M.' 13 ? primary 'Wu, D.' 14 ? primary 'Zeng, L.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*AP*TP*GP*GP*GP*AP*GP*GP*GP*TP*CP*TP*GP*GP*GP*AP*GP*GP*GP*CP*C)-3') ; 6938.463 1 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ? 3 non-polymer syn ;(4S)-4,11-DIETHYL-4-HYDROXY-3,14-DIOXO-3,4,12,14-TETRAHYDRO-1H-PYRANO[3',4':6,7]INDOLIZINO[1,2-B]QUINOLIN-9-YL 1,4'-BIPIPERIDINE-1'-CARBOXYLATE ; 586.678 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DA)(DA)(DT)(DG)(DG)(DG)(DA)(DG)(DG)(DG)(DT)(DC)(DT)(DG)(DG)(DG)(DA)(DG)(DG)(DG) (DC)(DC) ; _entity_poly.pdbx_seq_one_letter_code_can AATGGGAGGGTCTGGGAGGGCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 ;(4S)-4,11-DIETHYL-4-HYDROXY-3,14-DIOXO-3,4,12,14-TETRAHYDRO-1H-PYRANO[3',4':6,7]INDOLIZINO[1,2-B]QUINOLIN-9-YL 1,4'-BIPIPERIDINE-1'-CARBOXYLATE ; CP0 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DT n 1 4 DG n 1 5 DG n 1 6 DG n 1 7 DA n 1 8 DG n 1 9 DG n 1 10 DG n 1 11 DT n 1 12 DC n 1 13 DT n 1 14 DG n 1 15 DG n 1 16 DG n 1 17 DA n 1 18 DG n 1 19 DG n 1 20 DG n 1 21 DC n 1 22 DC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 22 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CP0 non-polymer . ;(4S)-4,11-DIETHYL-4-HYDROXY-3,14-DIOXO-3,4,12,14-TETRAHYDRO-1H-PYRANO[3',4':6,7]INDOLIZINO[1,2-B]QUINOLIN-9-YL 1,4'-BIPIPERIDINE-1'-CARBOXYLATE ; 'IRINOTECAN; CPT-11' 'C33 H38 N4 O6' 586.678 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA A . n A 1 2 DA 2 2 2 DA DA A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DT 11 11 11 DT DT A . n A 1 12 DC 12 12 12 DC DC A . n A 1 13 DT 13 13 13 DT DT A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DA 17 17 17 DA DA A . n A 1 18 DG 18 18 18 DG DG A . n A 1 19 DG 19 19 19 DG DG A . n A 1 20 DG 20 20 20 DG DG A . n A 1 21 DC 21 21 21 DC DC A . n A 1 22 DC 22 22 22 DC DC A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id CP0 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id CP0 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 501 501 K K A . C 2 K 1 502 601 K K A . D 3 CP0 1 503 201 CP0 CPT A . # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9VA0 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 9VA0 _struct.title 'Solution NMR structures of hTERT DNA G-quadruplexes (G4s) in complex with small molecule CPT-11' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9VA0 _struct_keywords.text 'G-quadruplexes, Topoisomerase I, CPT-11, Irinotecan, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9VA0 _struct_ref.pdbx_db_accession 9VA0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9VA0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9VA0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 4 O6 ? ? ? 1_555 B K . K ? ? A DG 4 A K 501 1_555 ? ? ? ? ? ? ? 2.797 ? ? metalc2 metalc ? ? A DG 5 O6 ? ? ? 1_555 B K . K ? ? A DG 5 A K 501 1_555 ? ? ? ? ? ? ? 2.805 ? ? metalc3 metalc ? ? A DG 5 O6 ? ? ? 1_555 C K . K ? ? A DG 5 A K 502 1_555 ? ? ? ? ? ? ? 2.798 ? ? metalc4 metalc ? ? A DG 6 O6 ? ? ? 1_555 C K . K ? ? A DG 6 A K 502 1_555 ? ? ? ? ? ? ? 2.800 ? ? metalc5 metalc ? ? A DG 8 O6 ? ? ? 1_555 B K . K ? ? A DG 8 A K 501 1_555 ? ? ? ? ? ? ? 2.793 ? ? metalc6 metalc ? ? A DG 9 O6 ? ? ? 1_555 B K . K ? ? A DG 9 A K 501 1_555 ? ? ? ? ? ? ? 2.807 ? ? metalc7 metalc ? ? A DG 9 O6 ? ? ? 1_555 C K . K ? ? A DG 9 A K 502 1_555 ? ? ? ? ? ? ? 2.798 ? ? metalc8 metalc ? ? A DG 10 O6 ? ? ? 1_555 C K . K ? ? A DG 10 A K 502 1_555 ? ? ? ? ? ? ? 2.798 ? ? metalc9 metalc ? ? A DG 14 O6 ? ? ? 1_555 B K . K ? ? A DG 14 A K 501 1_555 ? ? ? ? ? ? ? 2.801 ? ? metalc10 metalc ? ? A DG 15 O6 ? ? ? 1_555 B K . K ? ? A DG 15 A K 501 1_555 ? ? ? ? ? ? ? 2.800 ? ? metalc11 metalc ? ? A DG 15 O6 ? ? ? 1_555 C K . K ? ? A DG 15 A K 502 1_555 ? ? ? ? ? ? ? 2.805 ? ? metalc12 metalc ? ? A DG 16 O6 ? ? ? 1_555 C K . K ? ? A DG 16 A K 502 1_555 ? ? ? ? ? ? ? 2.795 ? ? metalc13 metalc ? ? A DG 18 O6 ? ? ? 1_555 B K . K ? ? A DG 18 A K 501 1_555 ? ? ? ? ? ? ? 2.790 ? ? metalc14 metalc ? ? A DG 19 O6 ? ? ? 1_555 B K . K ? ? A DG 19 A K 501 1_555 ? ? ? ? ? ? ? 2.811 ? ? metalc15 metalc ? ? A DG 19 O6 ? ? ? 1_555 C K . K ? ? A DG 19 A K 502 1_555 ? ? ? ? ? ? ? 2.794 ? ? metalc16 metalc ? ? A DG 20 O6 ? ? ? 1_555 C K . K ? ? A DG 20 A K 502 1_555 ? ? ? ? ? ? ? 2.803 ? ? hydrog1 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 18 N2 ? ? A DG 4 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 18 N1 ? ? A DG 4 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 19 N2 ? ? A DG 5 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 19 N1 ? ? A DG 5 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 6 N7 ? ? ? 1_555 A DG 20 N2 ? ? A DG 6 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DG 20 N1 ? ? A DG 6 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 8 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 8 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 16 O6 ? ? A DG 10 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 16 N7 ? ? A DG 10 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DG 18 O6 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DG 18 N7 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 19 O6 ? ? A DG 15 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 19 N7 ? ? A DG 15 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DG 20 O6 ? ? A DG 16 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DG 20 N7 ? ? A DG 16 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 75.0 ? 2 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 71.4 ? 3 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 95.5 ? 4 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 128.7 ? 5 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 69.9 ? 6 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 75.8 ? 7 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 109.5 ? 8 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 154.8 ? 9 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 64.2 ? 10 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 89.6 ? 11 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 158.5 ? 12 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 109.6 ? 13 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 127.3 ? 14 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 71.1 ? 15 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 75.6 ? 16 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 70.6 ? 17 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 129.1 ? 18 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 107.4 ? 19 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 158.9 ? 20 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 73.9 ? 21 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 91.7 ? 22 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 92.9 ? 23 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 71.1 ? 24 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 161.9 ? 25 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 109.3 ? 26 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 131.7 ? 27 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 69.9 ? 28 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? B K . ? A K 501 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 74.3 ? 29 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 75.2 ? 30 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 70.2 ? 31 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 97.0 ? 32 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 127.7 ? 33 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 71.3 ? 34 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 75.4 ? 35 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 109.7 ? 36 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 163.7 ? 37 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 71.2 ? 38 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 94.4 ? 39 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 163.5 ? 40 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 105.9 ? 41 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 125.3 ? 42 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 66.6 ? 43 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 74.1 ? 44 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 71.5 ? 45 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 125.6 ? 46 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 110.0 ? 47 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 159.7 ? 48 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 70.1 ? 49 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 95.7 ? 50 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 91.9 ? 51 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 63.7 ? 52 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 157.1 ? 53 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 107.1 ? 54 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 130.2 ? 55 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 74.4 ? 56 O6 ? A DG 19 ? A DG 19 ? 1_555 K ? C K . ? A K 502 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 75.8 ? # _pdbx_entry_details.entry_id 9VA0 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.22 108.30 2.92 0.30 N 2 1 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 112.11 108.30 3.81 0.30 N 3 2 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.50 108.30 3.20 0.30 N 4 2 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.97 108.30 3.67 0.30 N 5 3 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.31 108.30 3.01 0.30 N 6 3 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.97 108.30 3.67 0.30 N 7 4 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.18 108.30 2.88 0.30 N 8 4 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.82 108.30 3.52 0.30 N 9 5 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.16 108.30 2.86 0.30 N 10 5 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 112.12 108.30 3.82 0.30 N 11 6 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.09 108.30 2.79 0.30 N 12 6 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.92 108.30 3.62 0.30 N 13 7 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.04 108.30 2.74 0.30 N 14 7 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 112.02 108.30 3.72 0.30 N 15 8 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.26 108.30 2.96 0.30 N 16 8 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 112.02 108.30 3.72 0.30 N 17 9 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.18 108.30 2.88 0.30 N 18 9 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.80 108.30 3.50 0.30 N 19 10 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.32 108.30 3.02 0.30 N 20 10 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.87 108.30 3.57 0.30 N 21 11 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.57 108.30 3.27 0.30 N 22 11 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.75 108.30 3.45 0.30 N 23 12 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.18 108.30 2.88 0.30 N 24 12 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.71 108.30 3.41 0.30 N 25 13 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.39 108.30 3.09 0.30 N 26 13 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.98 108.30 3.68 0.30 N 27 14 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.25 108.30 2.95 0.30 N 28 14 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.94 108.30 3.64 0.30 N 29 15 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.41 108.30 3.11 0.30 N 30 15 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.91 108.30 3.61 0.30 N 31 16 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.27 108.30 2.97 0.30 N 32 16 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.76 108.30 3.46 0.30 N 33 17 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.30 108.30 3.00 0.30 N 34 17 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 112.10 108.30 3.80 0.30 N 35 18 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.20 108.30 2.90 0.30 N 36 18 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.71 108.30 3.41 0.30 N 37 19 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.25 108.30 2.95 0.30 N 38 19 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 112.00 108.30 3.70 0.30 N 39 20 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.70 108.30 3.40 0.30 N 40 20 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.88 108.30 2.58 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT A 11 ? ? 0.078 'SIDE CHAIN' 2 2 DT A 11 ? ? 0.077 'SIDE CHAIN' 3 3 DT A 11 ? ? 0.071 'SIDE CHAIN' 4 4 DT A 11 ? ? 0.075 'SIDE CHAIN' 5 5 DT A 11 ? ? 0.087 'SIDE CHAIN' 6 6 DT A 11 ? ? 0.078 'SIDE CHAIN' 7 7 DT A 11 ? ? 0.078 'SIDE CHAIN' 8 8 DT A 11 ? ? 0.068 'SIDE CHAIN' 9 9 DT A 11 ? ? 0.074 'SIDE CHAIN' 10 10 DT A 11 ? ? 0.082 'SIDE CHAIN' 11 11 DT A 11 ? ? 0.084 'SIDE CHAIN' 12 12 DT A 11 ? ? 0.071 'SIDE CHAIN' 13 13 DT A 11 ? ? 0.078 'SIDE CHAIN' 14 14 DT A 11 ? ? 0.061 'SIDE CHAIN' 15 15 DT A 11 ? ? 0.082 'SIDE CHAIN' 16 16 DT A 11 ? ? 0.087 'SIDE CHAIN' 17 17 DT A 11 ? ? 0.068 'SIDE CHAIN' 18 18 DT A 11 ? ? 0.080 'SIDE CHAIN' 19 19 DT A 11 ? ? 0.076 'SIDE CHAIN' 20 20 DT A 11 ? ? 0.083 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 9VA0 _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 9VA0 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '20 mM potassium phosphate, 70 mM potassium chloride, 100% D2O' '100% D2O' sample-d2o#1 solution ? 2 '20 mM potassium phosphate, 70 mM potassium chloride, 90% H2O/10% D2O' '90% H2O/10% D2O' sample-h2o#2 solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'potassium phosphate' 20 ? mM 'natural abundance' 1 'potassium chloride' 70 ? mM 'natural abundance' 2 'potassium phosphate' 20 ? mM 'natural abundance' 2 'potassium chloride' 70 ? mM 'natural abundance' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 atm 1 6.5 null ? ? 'Not defined' condition#298 ? pH ? ? K 2 288 atm 1 6.5 null ? ? 'Not defined' condition#288 ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 2 1 '2D 1H-1H NOESY' 1 isotropic 3 1 2 '2D 1H-1H NOESY' 2 isotropic # _pdbx_nmr_refine.entry_id 9VA0 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement ARIA ? ;Linge, O'Donoghue and Nilges ; 2 'structure calculation' CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' 3 'chemical shift assignment' NMRView ? 'Johnson, One Moon Scientific' 4 'peak picking' NMRView ? 'Johnson, One Moon Scientific' 5 collection TopSpin ? 'Bruker Biospin' 6 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CP0 N1 N Y N 1 CP0 N4 N Y N 2 CP0 O1 O N N 3 CP0 O2 O N N 4 CP0 O18 O N N 5 CP0 O19 O N N 6 CP0 O22 O N N 7 CP0 O23 O N N 8 CP0 C13 C Y N 9 CP0 C10 C Y N 10 CP0 C14 C Y N 11 CP0 C6 C Y N 12 CP0 C8 C Y N 13 CP0 C7 C Y N 14 CP0 C37 C N N 15 CP0 C3 C Y N 16 CP0 C9 C Y N 17 CP0 C12 C Y N 18 CP0 C11 C Y N 19 CP0 C2 C Y N 20 CP0 C16 C Y N 21 CP0 C15 C Y N 22 CP0 C23 C Y N 23 CP0 C17 C N N 24 CP0 C5 C N N 25 CP0 C21 C N N 26 CP0 C28 C N N 27 CP0 C20 C N S 28 CP0 C31 C N N 29 CP0 C32 C N N 30 CP0 C33 C N N 31 CP0 N2 N N N 32 CP0 N3 N N N 33 CP0 C25 C N N 34 CP0 C22 C N N 35 CP0 C24 C N N 36 CP0 C26 C N N 37 CP0 C29 C N N 38 CP0 C34 C N N 39 CP0 C35 C N N 40 CP0 C27 C N N 41 CP0 C30 C N N 42 CP0 C36 C N N 43 CP0 H23 H N N 44 CP0 H14 H N N 45 CP0 H9 H N N 46 CP0 H12 H N N 47 CP0 H11 H N N 48 CP0 H171 H N N 49 CP0 H172 H N N 50 CP0 H51 H N N 51 CP0 H52 H N N 52 CP0 H281 H N N 53 CP0 H282 H N N 54 CP0 H311 H N N 55 CP0 H312 H N N 56 CP0 H321 H N N 57 CP0 H322 H N N 58 CP0 H323 H N N 59 CP0 H331 H N N 60 CP0 H332 H N N 61 CP0 H333 H N N 62 CP0 H251 H N N 63 CP0 H252 H N N 64 CP0 H221 H N N 65 CP0 H222 H N N 66 CP0 H24 H N N 67 CP0 H261 H N N 68 CP0 H262 H N N 69 CP0 H291 H N N 70 CP0 H292 H N N 71 CP0 H341 H N N 72 CP0 H342 H N N 73 CP0 H351 H N N 74 CP0 H352 H N N 75 CP0 H271 H N N 76 CP0 H272 H N N 77 CP0 H301 H N N 78 CP0 H302 H N N 79 CP0 H11A H N N 80 CP0 H12A H N N 81 DA OP3 O N N 82 DA P P N N 83 DA OP1 O N N 84 DA OP2 O N N 85 DA "O5'" O N N 86 DA "C5'" C N N 87 DA "C4'" C N R 88 DA "O4'" O N N 89 DA "C3'" C N S 90 DA "O3'" O N N 91 DA "C2'" C N N 92 DA "C1'" C N R 93 DA N9 N Y N 94 DA C8 C Y N 95 DA N7 N Y N 96 DA C5 C Y N 97 DA C6 C Y N 98 DA N6 N N N 99 DA N1 N Y N 100 DA C2 C Y N 101 DA N3 N Y N 102 DA C4 C Y N 103 DA HOP3 H N N 104 DA HOP2 H N N 105 DA "H5'" H N N 106 DA "H5''" H N N 107 DA "H4'" H N N 108 DA "H3'" H N N 109 DA "HO3'" H N N 110 DA "H2'" H N N 111 DA "H2''" H N N 112 DA "H1'" H N N 113 DA H8 H N N 114 DA H61 H N N 115 DA H62 H N N 116 DA H2 H N N 117 DC OP3 O N N 118 DC P P N N 119 DC OP1 O N N 120 DC OP2 O N N 121 DC "O5'" O N N 122 DC "C5'" C N N 123 DC "C4'" C N R 124 DC "O4'" O N N 125 DC "C3'" C N S 126 DC "O3'" O N N 127 DC "C2'" C N N 128 DC "C1'" C N R 129 DC N1 N N N 130 DC C2 C N N 131 DC O2 O N N 132 DC N3 N N N 133 DC C4 C N N 134 DC N4 N N N 135 DC C5 C N N 136 DC C6 C N N 137 DC HOP3 H N N 138 DC HOP2 H N N 139 DC "H5'" H N N 140 DC "H5''" H N N 141 DC "H4'" H N N 142 DC "H3'" H N N 143 DC "HO3'" H N N 144 DC "H2'" H N N 145 DC "H2''" H N N 146 DC "H1'" H N N 147 DC H41 H N N 148 DC H42 H N N 149 DC H5 H N N 150 DC H6 H N N 151 DG OP3 O N N 152 DG P P N N 153 DG OP1 O N N 154 DG OP2 O N N 155 DG "O5'" O N N 156 DG "C5'" C N N 157 DG "C4'" C N R 158 DG "O4'" O N N 159 DG "C3'" C N S 160 DG "O3'" O N N 161 DG "C2'" C N N 162 DG "C1'" C N R 163 DG N9 N Y N 164 DG C8 C Y N 165 DG N7 N Y N 166 DG C5 C Y N 167 DG C6 C N N 168 DG O6 O N N 169 DG N1 N N N 170 DG C2 C N N 171 DG N2 N N N 172 DG N3 N N N 173 DG C4 C Y N 174 DG HOP3 H N N 175 DG HOP2 H N N 176 DG "H5'" H N N 177 DG "H5''" H N N 178 DG "H4'" H N N 179 DG "H3'" H N N 180 DG "HO3'" H N N 181 DG "H2'" H N N 182 DG "H2''" H N N 183 DG "H1'" H N N 184 DG H8 H N N 185 DG H1 H N N 186 DG H21 H N N 187 DG H22 H N N 188 DT OP3 O N N 189 DT P P N N 190 DT OP1 O N N 191 DT OP2 O N N 192 DT "O5'" O N N 193 DT "C5'" C N N 194 DT "C4'" C N R 195 DT "O4'" O N N 196 DT "C3'" C N S 197 DT "O3'" O N N 198 DT "C2'" C N N 199 DT "C1'" C N R 200 DT N1 N N N 201 DT C2 C N N 202 DT O2 O N N 203 DT N3 N N N 204 DT C4 C N N 205 DT O4 O N N 206 DT C5 C N N 207 DT C7 C N N 208 DT C6 C N N 209 DT HOP3 H N N 210 DT HOP2 H N N 211 DT "H5'" H N N 212 DT "H5''" H N N 213 DT "H4'" H N N 214 DT "H3'" H N N 215 DT "HO3'" H N N 216 DT "H2'" H N N 217 DT "H2''" H N N 218 DT "H1'" H N N 219 DT H3 H N N 220 DT H71 H N N 221 DT H72 H N N 222 DT H73 H N N 223 DT H6 H N N 224 K K K N N 225 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CP0 N1 C13 sing Y N 1 CP0 N1 C2 doub Y N 2 CP0 N4 C3 sing Y N 3 CP0 N4 C23 sing Y N 4 CP0 N4 C5 sing N N 5 CP0 O1 C37 doub N N 6 CP0 O2 C10 sing N N 7 CP0 O2 C37 sing N N 8 CP0 O18 C23 doub N N 9 CP0 O19 C17 sing N N 10 CP0 O19 C21 sing N N 11 CP0 O22 C21 doub N N 12 CP0 O23 C20 sing N N 13 CP0 O23 H23 sing N N 14 CP0 C13 C8 doub Y N 15 CP0 C13 C12 sing Y N 16 CP0 C10 C9 doub Y N 17 CP0 C10 C11 sing Y N 18 CP0 C14 C3 doub Y N 19 CP0 C14 C15 sing Y N 20 CP0 C14 H14 sing N N 21 CP0 C6 C7 doub Y N 22 CP0 C6 C2 sing Y N 23 CP0 C6 C5 sing N N 24 CP0 C8 C7 sing Y N 25 CP0 C8 C9 sing Y N 26 CP0 C7 C31 sing N N 27 CP0 C37 N2 sing N N 28 CP0 C3 C2 sing Y N 29 CP0 C9 H9 sing N N 30 CP0 C12 C11 doub Y N 31 CP0 C12 H12 sing N N 32 CP0 C11 H11 sing N N 33 CP0 C16 C15 doub Y N 34 CP0 C16 C23 sing Y N 35 CP0 C16 C17 sing N N 36 CP0 C15 C20 sing N N 37 CP0 C17 H171 sing N N 38 CP0 C17 H172 sing N N 39 CP0 C5 H51 sing N N 40 CP0 C5 H52 sing N N 41 CP0 C21 C20 sing N N 42 CP0 C28 C20 sing N N 43 CP0 C28 C33 sing N N 44 CP0 C28 H281 sing N N 45 CP0 C28 H282 sing N N 46 CP0 C31 C32 sing N N 47 CP0 C31 H311 sing N N 48 CP0 C31 H312 sing N N 49 CP0 C32 H321 sing N N 50 CP0 C32 H322 sing N N 51 CP0 C32 H323 sing N N 52 CP0 C33 H331 sing N N 53 CP0 C33 H332 sing N N 54 CP0 C33 H333 sing N N 55 CP0 N2 C22 sing N N 56 CP0 N2 C26 sing N N 57 CP0 N3 C24 sing N N 58 CP0 N3 C29 sing N N 59 CP0 N3 C35 sing N N 60 CP0 C25 C24 sing N N 61 CP0 C25 C26 sing N N 62 CP0 C25 H251 sing N N 63 CP0 C25 H252 sing N N 64 CP0 C22 C36 sing N N 65 CP0 C22 H221 sing N N 66 CP0 C22 H222 sing N N 67 CP0 C24 C36 sing N N 68 CP0 C24 H24 sing N N 69 CP0 C26 H261 sing N N 70 CP0 C26 H262 sing N N 71 CP0 C29 C34 sing N N 72 CP0 C29 H291 sing N N 73 CP0 C29 H292 sing N N 74 CP0 C34 C30 sing N N 75 CP0 C34 H341 sing N N 76 CP0 C34 H342 sing N N 77 CP0 C35 C27 sing N N 78 CP0 C35 H351 sing N N 79 CP0 C35 H352 sing N N 80 CP0 C27 C30 sing N N 81 CP0 C27 H271 sing N N 82 CP0 C27 H272 sing N N 83 CP0 C30 H301 sing N N 84 CP0 C30 H302 sing N N 85 CP0 C36 H11A sing N N 86 CP0 C36 H12A sing N N 87 DA OP3 P sing N N 88 DA OP3 HOP3 sing N N 89 DA P OP1 doub N N 90 DA P OP2 sing N N 91 DA P "O5'" sing N N 92 DA OP2 HOP2 sing N N 93 DA "O5'" "C5'" sing N N 94 DA "C5'" "C4'" sing N N 95 DA "C5'" "H5'" sing N N 96 DA "C5'" "H5''" sing N N 97 DA "C4'" "O4'" sing N N 98 DA "C4'" "C3'" sing N N 99 DA "C4'" "H4'" sing N N 100 DA "O4'" "C1'" sing N N 101 DA "C3'" "O3'" sing N N 102 DA "C3'" "C2'" sing N N 103 DA "C3'" "H3'" sing N N 104 DA "O3'" "HO3'" sing N N 105 DA "C2'" "C1'" sing N N 106 DA "C2'" "H2'" sing N N 107 DA "C2'" "H2''" sing N N 108 DA "C1'" N9 sing N N 109 DA "C1'" "H1'" sing N N 110 DA N9 C8 sing Y N 111 DA N9 C4 sing Y N 112 DA C8 N7 doub Y N 113 DA C8 H8 sing N N 114 DA N7 C5 sing Y N 115 DA C5 C6 sing Y N 116 DA C5 C4 doub Y N 117 DA C6 N6 sing N N 118 DA C6 N1 doub Y N 119 DA N6 H61 sing N N 120 DA N6 H62 sing N N 121 DA N1 C2 sing Y N 122 DA C2 N3 doub Y N 123 DA C2 H2 sing N N 124 DA N3 C4 sing Y N 125 DC OP3 P sing N N 126 DC OP3 HOP3 sing N N 127 DC P OP1 doub N N 128 DC P OP2 sing N N 129 DC P "O5'" sing N N 130 DC OP2 HOP2 sing N N 131 DC "O5'" "C5'" sing N N 132 DC "C5'" "C4'" sing N N 133 DC "C5'" "H5'" sing N N 134 DC "C5'" "H5''" sing N N 135 DC "C4'" "O4'" sing N N 136 DC "C4'" "C3'" sing N N 137 DC "C4'" "H4'" sing N N 138 DC "O4'" "C1'" sing N N 139 DC "C3'" "O3'" sing N N 140 DC "C3'" "C2'" sing N N 141 DC "C3'" "H3'" sing N N 142 DC "O3'" "HO3'" sing N N 143 DC "C2'" "C1'" sing N N 144 DC "C2'" "H2'" sing N N 145 DC "C2'" "H2''" sing N N 146 DC "C1'" N1 sing N N 147 DC "C1'" "H1'" sing N N 148 DC N1 C2 sing N N 149 DC N1 C6 sing N N 150 DC C2 O2 doub N N 151 DC C2 N3 sing N N 152 DC N3 C4 doub N N 153 DC C4 N4 sing N N 154 DC C4 C5 sing N N 155 DC N4 H41 sing N N 156 DC N4 H42 sing N N 157 DC C5 C6 doub N N 158 DC C5 H5 sing N N 159 DC C6 H6 sing N N 160 DG OP3 P sing N N 161 DG OP3 HOP3 sing N N 162 DG P OP1 doub N N 163 DG P OP2 sing N N 164 DG P "O5'" sing N N 165 DG OP2 HOP2 sing N N 166 DG "O5'" "C5'" sing N N 167 DG "C5'" "C4'" sing N N 168 DG "C5'" "H5'" sing N N 169 DG "C5'" "H5''" sing N N 170 DG "C4'" "O4'" sing N N 171 DG "C4'" "C3'" sing N N 172 DG "C4'" "H4'" sing N N 173 DG "O4'" "C1'" sing N N 174 DG "C3'" "O3'" sing N N 175 DG "C3'" "C2'" sing N N 176 DG "C3'" "H3'" sing N N 177 DG "O3'" "HO3'" sing N N 178 DG "C2'" "C1'" sing N N 179 DG "C2'" "H2'" sing N N 180 DG "C2'" "H2''" sing N N 181 DG "C1'" N9 sing N N 182 DG "C1'" "H1'" sing N N 183 DG N9 C8 sing Y N 184 DG N9 C4 sing Y N 185 DG C8 N7 doub Y N 186 DG C8 H8 sing N N 187 DG N7 C5 sing Y N 188 DG C5 C6 sing N N 189 DG C5 C4 doub Y N 190 DG C6 O6 doub N N 191 DG C6 N1 sing N N 192 DG N1 C2 sing N N 193 DG N1 H1 sing N N 194 DG C2 N2 sing N N 195 DG C2 N3 doub N N 196 DG N2 H21 sing N N 197 DG N2 H22 sing N N 198 DG N3 C4 sing N N 199 DT OP3 P sing N N 200 DT OP3 HOP3 sing N N 201 DT P OP1 doub N N 202 DT P OP2 sing N N 203 DT P "O5'" sing N N 204 DT OP2 HOP2 sing N N 205 DT "O5'" "C5'" sing N N 206 DT "C5'" "C4'" sing N N 207 DT "C5'" "H5'" sing N N 208 DT "C5'" "H5''" sing N N 209 DT "C4'" "O4'" sing N N 210 DT "C4'" "C3'" sing N N 211 DT "C4'" "H4'" sing N N 212 DT "O4'" "C1'" sing N N 213 DT "C3'" "O3'" sing N N 214 DT "C3'" "C2'" sing N N 215 DT "C3'" "H3'" sing N N 216 DT "O3'" "HO3'" sing N N 217 DT "C2'" "C1'" sing N N 218 DT "C2'" "H2'" sing N N 219 DT "C2'" "H2''" sing N N 220 DT "C1'" N1 sing N N 221 DT "C1'" "H1'" sing N N 222 DT N1 C2 sing N N 223 DT N1 C6 sing N N 224 DT C2 O2 doub N N 225 DT C2 N3 sing N N 226 DT N3 C4 sing N N 227 DT N3 H3 sing N N 228 DT C4 O4 doub N N 229 DT C4 C5 sing N N 230 DT C5 C7 sing N N 231 DT C5 C6 doub N N 232 DT C7 H71 sing N N 233 DT C7 H72 sing N N 234 DT C7 H73 sing N N 235 DT C6 H6 sing N N 236 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9VA0 'double helix' 9VA0 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 4 1_555 A DG 18 1_555 -1.310 -3.956 0.285 1.658 5.514 94.981 1 A_DG4:DG18_A A 4 ? A 18 ? 6 3 1 A DG 15 1_555 A DG 19 1_555 1.424 3.765 0.133 -6.660 -8.077 -88.043 2 A_DG15:DG19_A A 15 ? A 19 ? 6 3 1 A DG 16 1_555 A DG 20 1_555 1.674 3.689 0.366 -8.311 5.530 -85.933 3 A_DG16:DG20_A A 16 ? A 20 ? 6 3 1 A DG 6 1_555 A DG 10 1_555 1.480 3.767 0.033 -13.513 -0.821 -89.648 4 A_DG6:DG10_A A 6 ? A 10 ? 6 3 1 A DG 5 1_555 A DG 9 1_555 1.451 3.746 0.093 -6.957 -10.490 -87.371 5 A_DG5:DG9_A A 5 ? A 9 ? 6 3 1 A DG 14 1_555 A DG 8 1_555 -1.103 -3.760 0.703 -3.478 16.647 92.241 6 A_DG14:DG8_A A 14 ? A 8 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 4 1_555 A DG 18 1_555 A DG 15 1_555 A DG 19 1_555 0.377 2.343 3.063 -1.735 -5.980 -61.616 -2.009 0.289 3.264 5.822 -1.689 -61.899 1 AA_DG4DG15:DG19DG18_AA A 4 ? A 18 ? A 15 ? A 19 ? 1 A DG 15 1_555 A DG 19 1_555 A DG 16 1_555 A DG 20 1_555 -0.519 -0.669 3.364 0.486 2.338 26.268 -2.102 1.270 3.283 5.132 -1.067 26.374 2 AA_DG15DG16:DG20DG19_AA A 15 ? A 19 ? A 16 ? A 20 ? 1 A DG 16 1_555 A DG 20 1_555 A DG 6 1_555 A DG 10 1_555 -1.268 -3.693 0.004 -7.194 14.919 176.138 -1.847 0.634 -0.010 7.463 3.599 176.178 3 AA_DG16DG6:DG10DG20_AA A 16 ? A 20 ? A 6 ? A 10 ? 1 A DG 6 1_555 A DG 10 1_555 A DG 5 1_555 A DG 9 1_555 0.432 0.362 -3.330 -0.275 1.951 -22.616 -0.199 1.199 -3.343 -4.962 -0.700 -22.701 4 AA_DG6DG5:DG9DG10_AA A 6 ? A 10 ? A 5 ? A 9 ? 1 A DG 5 1_555 A DG 9 1_555 A DG 14 1_555 A DG 8 1_555 -0.702 -2.392 -3.040 -1.942 -2.528 59.654 -2.517 0.794 -2.924 -2.540 1.950 59.731 5 AA_DG5DG14:DG8DG9_AA A 5 ? A 9 ? A 14 ? A 8 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE NEO' ? Bruker 800 ? 2 'AVANCE NEO' ? Bruker 600 ? # _atom_sites.entry_id 9VA0 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H K N O P # loop_ #