HEADER PLANT PROTEIN 02-JUN-25 9VA4 TITLE CRYSTAL STRUCTURE OF PLANT LEGUMAIN IN COMPLEX WITH PHYTOCYSTATIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLANT LEGUMAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CYSTEINE PROTEINASE INHIBITOR; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: TYPE-II PHYTOCYSTATINS CONTAIN AN N-TERMINAL C1- COMPND 10 PROTEASE INHIBITORY DOMAIN AND A C-TERMINAL C13-PROTEASE INHIBITORY COMPND 11 DOMAIN. ONLY THE C-TERMINAL C13-PROTEASE INHIBITORY DOMAIN OF THE COMPND 12 STUDIED MODEL PHYTOCYSTATIN CTCYS WAS RECOMBINANTLY EXPRESSED TO FORM COMPND 13 THIS COMPLEX STRUCTURE. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EXALLAGE CHRYSOTRICHA; SOURCE 3 ORGANISM_TAXID: 1045351; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: CLITORIA TERNATEA; SOURCE 8 ORGANISM_TAXID: 43366; SOURCE 9 GENE: RJT34_01561; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PLANT LEGUMAIN, PHYTOCYSTATIN, COMPLEX CRYSTAL, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.Y.HEMU,W.Y.DU,J.H.MA,S.QI REVDAT 1 10-JUN-26 9VA4 0 JRNL AUTH X.Y.HEMU,W.Y.DU,J.H.MA,S.QI JRNL TITL CRYSTAL STRUCTURE OF PLANT LEGUMAIN IN COMPLEX WITH JRNL TITL 2 PHYTOCYSTATIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24144 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.730 REMARK 3 FREE R VALUE TEST SET COUNT : 1142 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.5100 - 4.5900 0.99 3020 154 0.1687 0.2120 REMARK 3 2 4.5900 - 3.6500 1.00 2896 156 0.1734 0.2137 REMARK 3 3 3.6500 - 3.1900 1.00 2870 124 0.1984 0.2544 REMARK 3 4 3.1900 - 2.9000 1.00 2882 134 0.2329 0.2476 REMARK 3 5 2.9000 - 2.6900 1.00 2855 124 0.2082 0.2923 REMARK 3 6 2.6900 - 2.5300 1.00 2847 150 0.2523 0.2843 REMARK 3 7 2.5300 - 2.4100 1.00 2837 143 0.2282 0.2947 REMARK 3 8 2.4000 - 2.3000 1.00 2795 157 0.2815 0.3052 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.281 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.072 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2891 REMARK 3 ANGLE : 0.806 3917 REMARK 3 CHIRALITY : 0.049 411 REMARK 3 PLANARITY : 0.006 516 REMARK 3 DIHEDRAL : 6.655 396 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9VA4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 03-JUN-25. REMARK 100 THE DEPOSITION ID IS D_1300059455. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAY-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL10U2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24844 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 25.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 18.90 REMARK 200 R MERGE (I) : 0.18900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.14800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, GLYCEROL, POTASSIUM REMARK 280 PHOSPHATE MONOBASIC, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.95333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.47667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.47667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 84.95333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ARG A 3 REMARK 465 TYR A 4 REMARK 465 SER A 5 REMARK 465 ALA A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 8 REMARK 465 VAL A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 LEU A 12 REMARK 465 VAL A 13 REMARK 465 LEU A 14 REMARK 465 LEU A 15 REMARK 465 SER A 16 REMARK 465 ILE A 17 REMARK 465 VAL A 18 REMARK 465 ALA A 19 REMARK 465 VAL A 20 REMARK 465 SER A 21 REMARK 465 GLU A 22 REMARK 465 GLU A 23 REMARK 465 ARG A 24 REMARK 465 ASN A 25 REMARK 465 GLY A 26 REMARK 465 TYR A 27 REMARK 465 LEU A 28 REMARK 465 LYS A 29 REMARK 465 LEU A 30 REMARK 465 SER A 31 REMARK 465 SER A 32 REMARK 465 GLU A 33 REMARK 465 LEU A 34 REMARK 465 SER A 35 REMARK 465 ASP A 36 REMARK 465 PHE A 37 REMARK 465 PHE A 38 REMARK 465 ARG A 39 REMARK 465 PRO A 40 REMARK 465 LYS A 41 REMARK 465 ASP A 42 REMARK 465 THR A 43 REMARK 465 ASN A 44 REMARK 465 ASP A 45 REMARK 465 GLY A 46 REMARK 465 ASP A 47 REMARK 465 ASP A 48 REMARK 465 SER A 49 REMARK 465 VAL A 50 REMARK 465 ASN A 298 REMARK 465 SER A 299 REMARK 465 ALA A 300 REMARK 465 TYR A 301 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 ALA B 3 REMARK 465 SER B 4 REMARK 465 SER B 5 REMARK 465 SER B 6 REMARK 465 ILE B 7 REMARK 465 PRO B 8 REMARK 465 PHE B 9 REMARK 465 PRO B 10 REMARK 465 PHE B 11 REMARK 465 PRO B 12 REMARK 465 PHE B 13 REMARK 465 LEU B 14 REMARK 465 HIS B 15 REMARK 465 LEU B 16 REMARK 465 PHE B 17 REMARK 465 PHE B 18 REMARK 465 LEU B 19 REMARK 465 PHE B 20 REMARK 465 ALA B 21 REMARK 465 LEU B 22 REMARK 465 PHE B 23 REMARK 465 THR B 24 REMARK 465 PHE B 25 REMARK 465 PRO B 26 REMARK 465 PRO B 27 REMARK 465 SER B 28 REMARK 465 SER B 29 REMARK 465 GLY B 30 REMARK 465 ASP B 31 REMARK 465 CYS B 32 REMARK 465 SER B 33 REMARK 465 GLN B 34 REMARK 465 TYR B 35 REMARK 465 ASP B 36 REMARK 465 HIS B 37 REMARK 465 ALA B 38 REMARK 465 PRO B 39 REMARK 465 MET B 40 REMARK 465 ALA B 41 REMARK 465 THR B 42 REMARK 465 LEU B 43 REMARK 465 GLY B 44 REMARK 465 GLY B 45 REMARK 465 LEU B 46 REMARK 465 GLN B 47 REMARK 465 ASP B 48 REMARK 465 SER B 49 REMARK 465 GLN B 50 REMARK 465 THR B 51 REMARK 465 SER B 52 REMARK 465 HIS B 53 REMARK 465 ASN B 54 REMARK 465 SER B 55 REMARK 465 LEU B 56 REMARK 465 GLU B 57 REMARK 465 THR B 58 REMARK 465 GLU B 59 REMARK 465 SER B 60 REMARK 465 LEU B 61 REMARK 465 ALA B 62 REMARK 465 ARG B 63 REMARK 465 PHE B 64 REMARK 465 ALA B 65 REMARK 465 VAL B 66 REMARK 465 ASP B 67 REMARK 465 GLU B 68 REMARK 465 HIS B 69 REMARK 465 ASN B 70 REMARK 465 LYS B 71 REMARK 465 LYS B 72 REMARK 465 GLN B 73 REMARK 465 ASN B 74 REMARK 465 ALA B 75 REMARK 465 LEU B 76 REMARK 465 LEU B 77 REMARK 465 GLU B 78 REMARK 465 PHE B 79 REMARK 465 ALA B 80 REMARK 465 GLY B 81 REMARK 465 VAL B 82 REMARK 465 VAL B 83 REMARK 465 ARG B 84 REMARK 465 ALA B 85 REMARK 465 GLN B 86 REMARK 465 GLU B 87 REMARK 465 GLN B 88 REMARK 465 VAL B 89 REMARK 465 VAL B 90 REMARK 465 ALA B 91 REMARK 465 GLY B 92 REMARK 465 THR B 93 REMARK 465 LEU B 94 REMARK 465 HIS B 95 REMARK 465 HIS B 96 REMARK 465 LEU B 97 REMARK 465 THR B 98 REMARK 465 ILE B 99 REMARK 465 GLU B 100 REMARK 465 ALA B 101 REMARK 465 ILE B 102 REMARK 465 ASP B 103 REMARK 465 ALA B 104 REMARK 465 GLY B 105 REMARK 465 GLU B 106 REMARK 465 LYS B 107 REMARK 465 LYS B 108 REMARK 465 ILE B 109 REMARK 465 TYR B 110 REMARK 465 GLU B 111 REMARK 465 ALA B 112 REMARK 465 LYS B 113 REMARK 465 VAL B 114 REMARK 465 TRP B 115 REMARK 465 VAL B 116 REMARK 465 LYS B 117 REMARK 465 PRO B 118 REMARK 465 TRP B 119 REMARK 465 LEU B 120 REMARK 465 ASN B 121 REMARK 465 PHE B 122 REMARK 465 LYS B 123 REMARK 465 GLU B 124 REMARK 465 LEU B 125 REMARK 465 GLN B 126 REMARK 465 GLU B 127 REMARK 465 PHE B 128 REMARK 465 LYS B 129 REMARK 465 HIS B 130 REMARK 465 ALA B 131 REMARK 465 GLY B 132 REMARK 465 ASP B 133 REMARK 465 ALA B 134 REMARK 465 PRO B 135 REMARK 465 SER B 136 REMARK 465 PHE B 137 REMARK 465 THR B 138 REMARK 465 SER B 139 REMARK 465 SER B 140 REMARK 465 ASP B 141 REMARK 465 LEU B 142 REMARK 465 GLY B 143 REMARK 465 ALA B 144 REMARK 465 LYS B 145 REMARK 465 LYS B 146 REMARK 465 ASP B 147 REMARK 465 GLY B 148 REMARK 465 HIS B 149 REMARK 465 GLN B 150 REMARK 465 PRO B 151 REMARK 465 ASP B 198 REMARK 465 ASP B 199 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 96 32.40 78.73 REMARK 500 LYS A 125 69.57 -104.89 REMARK 500 PRO A 174 102.91 -59.99 REMARK 500 ASN A 296 61.14 61.55 REMARK 500 LYS B 233 -96.57 -102.32 REMARK 500 MET B 235 100.22 -160.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 THR A 169 10.69 REMARK 500 REMARK 500 REMARK: NULL DBREF 9VA4 A 1 328 PDB 9VA4 9VA4 1 328 DBREF1 9VA4 B 1 240 UNP A0AAN9Q3E0_CLITE DBREF2 9VA4 B A0AAN9Q3E0 1 240 SEQRES 1 A 328 MET VAL ARG TYR SER ALA GLY ALA VAL LEU LEU LEU VAL SEQRES 2 A 328 LEU LEU SER ILE VAL ALA VAL SER GLU GLU ARG ASN GLY SEQRES 3 A 328 TYR LEU LYS LEU SER SER GLU LEU SER ASP PHE PHE ARG SEQRES 4 A 328 PRO LYS ASP THR ASN ASP GLY ASP ASP SER VAL GLY THR SEQRES 5 A 328 ARG TRP ALA VAL LEU LEU ALA GLY SER ASN GLY TYR TRP SEQRES 6 A 328 ASN TYR ARG HIS GLN ALA ASP VAL CYS HIS ALA TYR GLN SEQRES 7 A 328 ILE LEU LYS ARG GLY GLY LEU LYS ASP GLU ASN ILE VAL SEQRES 8 A 328 VAL PHE MET TYR ASP ASP ILE ALA TYR ASN GLU GLU ASN SEQRES 9 A 328 PRO ARG PRO GLY VAL ILE ILE ASN SER PRO HIS GLY ASN SEQRES 10 A 328 ASP VAL TYR ALA GLY VAL PRO LYS ASP TYR THR GLY ASP SEQRES 11 A 328 GLU VAL ASN ALA LYS ASN PHE LEU ALA ALA ILE LEU GLY SEQRES 12 A 328 ASP LYS SER ALA ILE THR GLY GLY SER GLY LYS VAL VAL SEQRES 13 A 328 ASP SER GLY PRO ASN ASP HIS ILE PHE ILE TYR TYR THR SEQRES 14 A 328 SNN HIS GLY GLY PRO GLY VAL LEU GLY MET PRO SER GLY SEQRES 15 A 328 PRO TYR LEU TYR ALA ASP GLU LEU ASN ASP ALA LEU LYS SEQRES 16 A 328 LYS LYS HIS ALA SER GLY THR TYR LYS SER LEU VAL PHE SEQRES 17 A 328 TYR LEU GLU ALA SCH GLU SER GLY SER ILE PHE GLU GLY SEQRES 18 A 328 LEU LEU PRO GLU GLY LEU ASN ILE TYR ALA THR THR ALA SEQRES 19 A 328 SER ASN ALA GLU GLU SER SER TRP GLY THR TYR CYS PRO SEQRES 20 A 328 GLY GLU TYR PRO SER PRO PRO PRO GLU TYR GLU THR CYS SEQRES 21 A 328 LEU GLY ASP LEU TYR SER VAL ALA TRP MET GLU ASP SER SEQRES 22 A 328 GLU VAL HIS ASN LEU ARG SER GLU THR LEU LYS GLN GLN SEQRES 23 A 328 TYR HIS LEU VAL LYS THR ARG THR SER ASN GLY ASN SER SEQRES 24 A 328 ALA TYR GLY SER HIS VAL MET GLN TYR GLY ASP LEU LYS SEQRES 25 A 328 LEU SER VAL ASP ASN LEU PHE MET TYR MET GLY THR ASN SEQRES 26 A 328 PRO ALA ASN SEQRES 1 B 240 MET ARG ALA SER SER SER ILE PRO PHE PRO PHE PRO PHE SEQRES 2 B 240 LEU HIS LEU PHE PHE LEU PHE ALA LEU PHE THR PHE PRO SEQRES 3 B 240 PRO SER SER GLY ASP CYS SER GLN TYR ASP HIS ALA PRO SEQRES 4 B 240 MET ALA THR LEU GLY GLY LEU GLN ASP SER GLN THR SER SEQRES 5 B 240 HIS ASN SER LEU GLU THR GLU SER LEU ALA ARG PHE ALA SEQRES 6 B 240 VAL ASP GLU HIS ASN LYS LYS GLN ASN ALA LEU LEU GLU SEQRES 7 B 240 PHE ALA GLY VAL VAL ARG ALA GLN GLU GLN VAL VAL ALA SEQRES 8 B 240 GLY THR LEU HIS HIS LEU THR ILE GLU ALA ILE ASP ALA SEQRES 9 B 240 GLY GLU LYS LYS ILE TYR GLU ALA LYS VAL TRP VAL LYS SEQRES 10 B 240 PRO TRP LEU ASN PHE LYS GLU LEU GLN GLU PHE LYS HIS SEQRES 11 B 240 ALA GLY ASP ALA PRO SER PHE THR SER SER ASP LEU GLY SEQRES 12 B 240 ALA LYS LYS ASP GLY HIS GLN PRO GLY TRP GLN SER VAL SEQRES 13 B 240 PRO THR HIS ASP PRO GLN VAL GLN ASP ALA ALA ASP HIS SEQRES 14 B 240 ALA ILE LYS THR MET GLN GLN ARG SER ASN SER LEU ALA SEQRES 15 B 240 PRO TYR GLU LEU HIS GLN VAL VAL ASP ALA LYS ALA GLU SEQRES 16 B 240 VAL ILE ASP ASP LEU ALA LYS PHE ASN LEU LEU LEU LYS SEQRES 17 B 240 VAL LYS ARG GLY GLU LYS ASP GLU LYS PHE LYS VAL GLU SEQRES 18 B 240 VAL HIS LYS ASN ASN GLN GLY ASP PHE LEU LEU LYS GLN SEQRES 19 B 240 MET GLU GLN ASP ARG SER HET SNN A 170 8 HET SCH A 213 8 HETNAM SNN L-3-AMINOSUCCINIMIDE HETNAM SCH S-METHYL-THIO-CYSTEINE FORMUL 1 SNN C4 H6 N2 O2 FORMUL 1 SCH C4 H9 N O2 S2 FORMUL 3 HOH *71(H2 O) HELIX 1 AA1 GLY A 63 TRP A 65 5 3 HELIX 2 AA2 ASN A 66 GLY A 83 1 18 HELIX 3 AA3 LYS A 86 GLU A 88 5 3 HELIX 4 AA4 THR A 128 VAL A 132 5 5 HELIX 5 AA5 ASN A 133 LEU A 142 1 10 HELIX 6 AA6 ASP A 144 ILE A 148 5 5 HELIX 7 AA7 ALA A 187 SER A 200 1 14 HELIX 8 AA8 SER A 215 GLU A 220 1 6 HELIX 9 AA9 LEU A 264 VAL A 275 1 12 HELIX 10 AB1 THR A 282 SER A 295 1 14 HELIX 11 AB2 LEU A 311 ASN A 317 5 7 HELIX 12 AB3 LEU A 318 GLY A 323 1 6 HELIX 13 AB4 ASP B 160 SER B 178 1 19 SHEET 1 AA1 6 ILE A 90 PHE A 93 0 SHEET 2 AA1 6 ARG A 53 ALA A 59 1 N LEU A 57 O PHE A 93 SHEET 3 AA1 6 HIS A 163 THR A 169 1 O HIS A 163 N TRP A 54 SHEET 4 AA1 6 SER A 205 GLU A 211 1 O VAL A 207 N ILE A 166 SHEET 5 AA1 6 ILE A 229 THR A 233 1 O TYR A 230 N LEU A 206 SHEET 6 AA1 6 MET A 306 GLY A 309 -1 O TYR A 308 N ALA A 231 SHEET 1 AA2 3 GLY A 172 GLY A 173 0 SHEET 2 AA2 3 VAL A 176 LEU A 177 -1 O VAL A 176 N GLY A 173 SHEET 3 AA2 3 LEU A 185 TYR A 186 -1 O LEU A 185 N LEU A 177 SHEET 1 AA3 2 GLY A 243 THR A 244 0 SHEET 2 AA3 2 GLY A 262 ASP A 263 -1 O GLY A 262 N THR A 244 SHEET 1 AA4 5 GLN B 154 SER B 155 0 SHEET 2 AA4 5 TYR B 184 GLU B 195 -1 O ALA B 194 N GLN B 154 SHEET 3 AA4 5 ALA B 201 ARG B 211 -1 O ASN B 204 N LYS B 193 SHEET 4 AA4 5 LYS B 214 LYS B 224 -1 O PHE B 218 N LEU B 207 SHEET 5 AA4 5 PHE B 230 ASP B 238 -1 O LYS B 233 N GLU B 221 SSBOND 1 CYS A 246 CYS A 260 1555 1555 2.07 LINK C THR A 169 N SNN A 170 1555 1555 1.43 LINK N1 SNN A 170 CA HIS A 171 1555 1555 1.43 LINK C ALA A 212 N SCH A 213 1555 1555 1.34 LINK C SCH A 213 N GLU A 214 1555 1555 1.33 CISPEP 1 TYR A 250 PRO A 251 0 -1.18 CRYST1 84.890 84.890 127.430 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011780 0.006801 0.000000 0.00000 SCALE2 0.000000 0.013602 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007847 0.00000 CONECT 920 928 CONECT 925 926 930 933 CONECT 926 925 927 931 CONECT 927 926 928 929 CONECT 928 920 927 CONECT 929 927 930 CONECT 930 925 929 932 CONECT 931 926 CONECT 932 930 CONECT 933 925 CONECT 1246 1249 CONECT 1249 1246 1250 CONECT 1250 1249 1251 1255 CONECT 1251 1250 1252 CONECT 1252 1251 1253 CONECT 1253 1252 1254 CONECT 1254 1253 CONECT 1255 1250 1256 1257 CONECT 1256 1255 CONECT 1257 1255 CONECT 1501 1610 CONECT 1610 1501 MASTER 474 0 2 13 16 0 0 6 2895 2 22 45 END