HEADER LIGASE 12-JUN-25 9VG5 TITLE NMR SOLUTION STRUCTURE OF THE MONOMERIC CATALYTIC C-TERMINAL LOBE OF TITLE 2 THE E6AP HECT E3 UBIQUITIN LIGASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN-PROTEIN LIGASE E3A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: E6AP UBIQUITIN-PROTEIN LIGASE,HECT-TYPE UBIQUITIN COMPND 5 TRANSFERASE E3A,HUMAN PAPILLOMAVIRUS E6-ASSOCIATED PROTEIN,ONCOGENIC COMPND 6 PROTEIN-ASSOCIATED PROTEIN E6-AP,RENAL CARCINOMA ANTIGEN NY-REN-54; COMPND 7 EC: 2.3.2.26; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBE3A, E6AP, EPVE6AP, HPVE6A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA 2 KEYWDS HECT LIGASE, E6AP, E3 LIGASE, C-LOBE, LIGASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.DAG,M.LAMBERT,F.LOHR,W.LEE,A.E.KAZAR,V.DOTSCH REVDAT 1 25-JUN-25 9VG5 0 JRNL AUTH C.DAG,M.LAMBERT,F.LOHR,W.LEE,A.E.KAZAR,V.DOTSCH JRNL TITL NMR SOLUTION STRUCTURE OF THE MONOMERIC CATALYTIC C-TERMINAL JRNL TITL 2 LOBE OF THE E6AP HECT E3 UBIQUITIN LIGASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : POKY REMARK 3 AUTHORS : MANTHEY, TONELLI, CLOS II, RAHIMI, MARKLEY AND LEE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9VG5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUN-25. REMARK 100 THE DEPOSITION ID IS D_1300060595. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.7 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT PA REMARK 210 SAMPLE CONTENTS : 20 MM NAPI, 100 MM NACL, 0.15 MM REMARK 210 DSS, 5 MM DTT, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HN(CA)CO; 3D HNCACB; 3D HN(COCA) REMARK 210 CB; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 3D 1H-13C NOESY AROMATIC; 3D 1H- REMARK 210 15N NOESY; 3D H(CCO)NH; 3D HCCH- REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 1200 MHZ; 950 MHZ; 900 MHZ; 800 REMARK 210 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE NEO; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR NIH, POKY REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 400 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 2 97.69 -59.95 REMARK 500 1 ASN A 5 127.66 55.31 REMARK 500 1 ARG A 55 168.21 -48.94 REMARK 500 1 ASP A 74 95.02 -51.14 REMARK 500 2 ARG A 4 -70.97 69.93 REMARK 500 2 ASN A 5 -75.58 64.70 REMARK 500 2 ARG A 55 167.93 -44.97 REMARK 500 2 ASP A 74 90.14 -53.71 REMARK 500 3 ARG A 55 167.44 -45.31 REMARK 500 3 PRO A 73 175.44 -59.21 REMARK 500 3 LYS A 111 -71.66 77.56 REMARK 500 4 ARG A 55 167.48 -43.93 REMARK 500 4 ASP A 74 91.79 -33.17 REMARK 500 5 SER A 3 37.33 -92.80 REMARK 500 5 ARG A 4 95.36 46.83 REMARK 500 5 ARG A 55 166.62 -44.81 REMARK 500 5 ASP A 74 71.50 -68.89 REMARK 500 5 GLU A 76 96.22 -64.26 REMARK 500 6 ARG A 55 167.02 -45.20 REMARK 500 6 ASP A 74 103.90 -46.23 REMARK 500 6 PHE A 113 77.37 66.27 REMARK 500 7 SER A 3 88.80 176.39 REMARK 500 7 ARG A 4 -46.71 -150.65 REMARK 500 7 ASN A 5 -71.24 -74.80 REMARK 500 7 ARG A 55 165.18 -43.48 REMARK 500 7 ASP A 74 88.09 -54.77 REMARK 500 7 GLU A 76 85.53 -66.37 REMARK 500 8 SER A 3 -75.60 67.80 REMARK 500 8 LEU A 6 44.13 -172.95 REMARK 500 8 ASP A 7 86.71 -62.39 REMARK 500 8 ASP A 74 89.26 -59.59 REMARK 500 8 GLU A 76 95.19 -65.13 REMARK 500 9 ARG A 55 167.62 -42.57 REMARK 500 9 ASP A 74 70.35 -67.93 REMARK 500 10 ARG A 55 166.28 -43.10 REMARK 500 10 VAL A 58 93.11 -57.13 REMARK 500 10 ASP A 74 102.11 -48.38 REMARK 500 11 PRO A 2 -75.65 -60.72 REMARK 500 11 ARG A 55 167.16 -44.38 REMARK 500 11 ASP A 74 93.55 -49.51 REMARK 500 12 SER A 3 -174.45 -63.66 REMARK 500 12 ASN A 5 -82.40 -147.51 REMARK 500 12 THR A 15 151.89 -47.38 REMARK 500 12 ARG A 55 166.17 -44.42 REMARK 500 12 PHE A 113 -166.78 -170.86 REMARK 500 13 SER A 3 -55.88 77.12 REMARK 500 13 ASP A 74 87.23 -52.39 REMARK 500 13 GLU A 76 97.79 -63.71 REMARK 500 13 MET A 115 -33.00 176.11 REMARK 500 14 ARG A 55 167.42 -44.46 REMARK 500 REMARK 500 THIS ENTRY HAS 72 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36763 RELATED DB: BMRB REMARK 900 NMR SOLUTION STRUCTURE OF THE MONOMERIC CATALYTIC C-TERMINAL LOBE REMARK 900 OF THE E6AP HECT E3 UBIQUITIN LIGASE DBREF 9VG5 A 3 116 UNP Q05086 UBE3A_HUMAN 762 875 SEQADV 9VG5 GLY A 1 UNP Q05086 EXPRESSION TAG SEQADV 9VG5 PRO A 2 UNP Q05086 EXPRESSION TAG SEQADV 9VG5 ALA A 84 UNP Q05086 CYS 843 CONFLICT SEQRES 1 A 116 GLY PRO SER ARG ASN LEU ASP PHE GLN ALA LEU GLU GLU SEQRES 2 A 116 THR THR GLU TYR ASP GLY GLY TYR THR ARG ASP SER VAL SEQRES 3 A 116 LEU ILE ARG GLU PHE TRP GLU ILE VAL HIS SER PHE THR SEQRES 4 A 116 ASP GLU GLN LYS ARG LEU PHE LEU GLN PHE THR THR GLY SEQRES 5 A 116 THR ASP ARG ALA PRO VAL GLY GLY LEU GLY LYS LEU LYS SEQRES 6 A 116 MET ILE ILE ALA LYS ASN GLY PRO ASP THR GLU ARG LEU SEQRES 7 A 116 PRO THR SER HIS THR ALA PHE ASN VAL LEU LEU LEU PRO SEQRES 8 A 116 GLU TYR SER SER LYS GLU LYS LEU LYS GLU ARG LEU LEU SEQRES 9 A 116 LYS ALA ILE THR TYR ALA LYS GLY PHE GLY MET LEU HELIX 1 AA1 PHE A 8 THR A 14 1 7 HELIX 2 AA2 SER A 25 PHE A 38 1 14 HELIX 3 AA3 THR A 39 GLY A 52 1 14 HELIX 4 AA4 GLY A 60 LEU A 64 5 5 HELIX 5 AA5 SER A 95 ALA A 110 1 16 SHEET 1 AA1 4 THR A 15 TYR A 17 0 SHEET 2 AA1 4 MET A 66 LYS A 70 1 O MET A 66 N GLU A 16 SHEET 3 AA1 4 VAL A 87 LEU A 90 1 O LEU A 88 N ALA A 69 SHEET 4 AA1 4 THR A 80 HIS A 82 -1 N THR A 80 O LEU A 89 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MODEL 11 ENDMDL MODEL 12 ENDMDL MODEL 13 ENDMDL MODEL 14 ENDMDL MODEL 15 ENDMDL MODEL 16 ENDMDL MODEL 17 ENDMDL MODEL 18 ENDMDL MODEL 19 ENDMDL MODEL 20 ENDMDL MASTER 147 0 0 5 4 0 0 6 929 1 0 9 END