HEADER PLANT PROTEIN 14-JUN-25 9VGI TITLE CRYSTAL STRUCTURE OF O-DEMETHYLASE 4 (ODM4) FROM CORYDALIS YANHUSUO COMPND MOL_ID: 1; COMPND 2 MOLECULE: O-DEMETHYLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYDALIS YANHUSUO; SOURCE 3 ORGANISM_TAXID: 458692; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS 2-OXOGLUTARATE, DEMETHYLASE, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.Z.FU,Y.C.ZHAO REVDAT 1 17-JUN-26 9VGI 0 JRNL AUTH Y.Z.FU,Y.Z.ZHAO JRNL TITL NATURAL AND ENGINEERED REGIO- AND STEREOSELECTIVE JRNL TITL 2 O-DEMETHYLATION BY FE(II)/2-OXOGLUTARATE-DEPENDENT JRNL TITL 3 OXYGENASES IN CORYDALMINE BIOSYNTHESIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX V1.21 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 24611 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.6200 - 6.1600 0.98 1761 155 0.1767 0.2060 REMARK 3 2 6.1600 - 4.8900 0.99 1695 150 0.1854 0.2448 REMARK 3 3 4.8900 - 4.2800 1.00 1669 147 0.1626 0.2164 REMARK 3 4 4.2800 - 3.8900 1.00 1672 149 0.1826 0.2257 REMARK 3 5 3.8900 - 3.6100 1.00 1636 144 0.2192 0.2594 REMARK 3 6 3.6100 - 3.4000 1.00 1663 147 0.2070 0.2608 REMARK 3 7 3.3900 - 3.2300 1.00 1637 146 0.2161 0.2667 REMARK 3 8 3.2300 - 3.0800 1.00 1646 145 0.2349 0.3147 REMARK 3 9 3.0800 - 2.9700 1.00 1643 145 0.2225 0.2786 REMARK 3 10 2.9700 - 2.8600 1.00 1634 144 0.2417 0.2908 REMARK 3 11 2.8600 - 2.7700 0.99 1616 144 0.2380 0.3110 REMARK 3 12 2.7700 - 2.7000 0.94 1533 135 0.2276 0.3087 REMARK 3 13 2.7000 - 2.6200 0.88 1440 128 0.2430 0.3134 REMARK 3 14 2.6200 - 2.5600 0.83 1367 120 0.2467 0.3332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.313 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.888 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5617 REMARK 3 ANGLE : 1.135 7603 REMARK 3 CHIRALITY : 0.061 843 REMARK 3 PLANARITY : 0.009 984 REMARK 3 DIHEDRAL : 17.201 2137 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 19.0019 14.2807 -18.1329 REMARK 3 T TENSOR REMARK 3 T11: 0.1840 T22: 0.2123 REMARK 3 T33: 0.1491 T12: 0.0206 REMARK 3 T13: 0.0379 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.2078 L22: 1.5178 REMARK 3 L33: 0.3183 L12: -0.2005 REMARK 3 L13: 0.2040 L23: -0.5458 REMARK 3 S TENSOR REMARK 3 S11: 0.0359 S12: 0.1034 S13: 0.0235 REMARK 3 S21: -0.2865 S22: -0.0215 S23: -0.0817 REMARK 3 S31: 0.0496 S32: 0.0243 S33: -0.0083 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "A" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 1 through 122 or REMARK 3 resid 124 through 401)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9VGI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 17-JUN-25. REMARK 100 THE DEPOSITION ID IS D_1300060641. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JUN 30, 2024; BUILD: REMARK 200 20240712 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24665 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.560 REMARK 200 RESOLUTION RANGE LOW (A) : 35.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.63 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, AMMONIUM SULFATE, PROTEIN REMARK 280 SOLUTION, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.62000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.58500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.92500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.58500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.62000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.92500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 123 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 105 -15.73 -49.11 REMARK 500 ASN A 111 79.03 -100.98 REMARK 500 GLN A 118 -61.10 -121.88 REMARK 500 ALA A 119 -158.57 66.97 REMARK 500 PHE A 120 -45.11 65.52 REMARK 500 GLU A 125 178.74 72.16 REMARK 500 GLN A 126 -176.19 63.13 REMARK 500 ASN A 234 -153.63 -111.38 REMARK 500 VAL A 309 168.50 76.17 REMARK 500 LYS A 310 -20.60 72.31 REMARK 500 LYS A 328 51.27 -93.34 REMARK 500 ASP A 336 -173.94 171.39 REMARK 500 LYS A 338 79.13 -66.20 REMARK 500 SER B 3 170.86 175.25 REMARK 500 ALA B 105 -19.94 -49.10 REMARK 500 ASN B 111 36.89 -88.46 REMARK 500 PHE B 120 138.55 -33.49 REMARK 500 SER B 123 96.98 -27.44 REMARK 500 GLU B 124 -13.75 70.38 REMARK 500 GLU B 125 -21.05 59.78 REMARK 500 ASN B 234 -153.19 -111.78 REMARK 500 LEU B 329 31.37 -90.94 REMARK 500 PHE B 331 39.43 -81.06 REMARK 500 LYS B 338 20.33 -67.30 REMARK 500 ASN B 339 20.85 -157.84 REMARK 500 LEU B 340 -69.72 76.35 REMARK 500 GLU B 342 39.30 -78.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 402 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 221 NE2 REMARK 620 2 ASP A 223 OD1 78.4 REMARK 620 3 HIS A 278 NE2 82.2 94.3 REMARK 620 4 AKG A 401 O2 96.8 95.5 169.8 REMARK 620 5 AKG A 401 O5 98.1 175.7 87.7 82.4 REMARK 620 6 HOH A 515 O 168.8 98.0 87.6 94.1 85.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 402 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 221 NE2 REMARK 620 2 ASP B 223 OD1 104.9 REMARK 620 3 HIS B 278 NE2 83.8 96.4 REMARK 620 4 AKG B 401 O1 107.5 99.3 157.4 REMARK 620 5 AKG B 401 O5 87.5 167.3 81.9 79.2 REMARK 620 6 HOH B 506 O 164.7 89.7 90.1 74.0 77.8 REMARK 620 N 1 2 3 4 5 DBREF 9VGI A 1 347 PDB 9VGI 9VGI 1 347 DBREF 9VGI B 1 347 PDB 9VGI 9VGI 1 347 SEQRES 1 A 347 GLY GLY SER LEU PRO VAL GLU ASN VAL GLN ALA LEU ALA SEQRES 2 A 347 SER ARG ASP LEU LYS ASP ILE PRO ALA ARG TYR ILE ARG SEQRES 3 A 347 PRO GLU LEU GLU SER ASP VAL VAL TYR THR ASP GLU SER SEQRES 4 A 347 LEU GLU ILE PRO VAL ILE ASP LEU SER ARG LEU LEU ASP SEQRES 5 A 347 GLN GLN SER MET TYR GLU GLU LEU LYS LYS PHE GLN SER SEQRES 6 A 347 ALA CYS GLU ASP TRP GLY PHE PHE GLN LEU ILE ASN HIS SEQRES 7 A 347 GLY VAL PRO GLU GLU VAL ILE GLU LYS MET LYS VAL ASP SEQRES 8 A 347 VAL ASN ASP PHE PHE LYS LEU PRO LEU GLU GLU LYS LYS SEQRES 9 A 347 ALA TYR SER GLN LEU PRO ASN ASP LEU GLU GLY TYR GLY SEQRES 10 A 347 GLN ALA PHE VAL VAL SER GLU GLU GLN LYS LEU ASP TRP SEQRES 11 A 347 SER ASP MET PHE TYR LEU ARG ALA GLN PRO VAL ALA GLY SEQRES 12 A 347 ARG ASN MET THR LEU TRP PRO LYS TYR PRO THR SER PHE SEQRES 13 A 347 ARG ALA THR LEU ASP LYS TYR SER SER GLU THR GLN LYS SEQRES 14 A 347 VAL THR VAL CYS MET LEU GLY CYS MET ALA LYS ASN LEU SEQRES 15 A 347 GLY VAL ASP PRO ASN LYS LEU THR SER MET PHE GLU MET SEQRES 16 A 347 GLY SER VAL GLY VAL ARG MET ASN TYR TYR PRO PRO CYS SEQRES 17 A 347 VAL VAL ASN ALA ASP LYS VAL LEU GLY ILE SER PRO HIS SEQRES 18 A 347 SER ASP ALA VAL GLY ILE THR LEU LEU THR GLN VAL ASN SEQRES 19 A 347 GLU VAL GLN GLY LEU GLN ILE LYS LYS ASN GLY ASN TRP SEQRES 20 A 347 VAL PRO VAL LYS PRO ILE PRO GLY ALA PHE ILE VAL ASN SEQRES 21 A 347 ILE GLY ASP ILE ILE GLU ILE MET SER ASN GLY LYS TYR SEQRES 22 A 347 LYS SER ILE GLU HIS ARG ALA VAL ILE ASP PRO LEU ALA SEQRES 23 A 347 GLU ARG MET SER ILE ALA ALA PHE HIS SER PRO GLY ILE SEQRES 24 A 347 GLU THR LEU GLY PRO LEU PRO GLU LEU VAL LYS MET THR SEQRES 25 A 347 GLY GLY GLU GLU LYS TYR LYS THR LEU ASN TYR VAL GLU SEQRES 26 A 347 TYR LEU LYS LEU ILE PHE SER THR LYS LEU ASP GLY LYS SEQRES 27 A 347 ASN LEU LEU GLU PHE MET LYS LEU ASP SEQRES 1 B 347 GLY GLY SER LEU PRO VAL GLU ASN VAL GLN ALA LEU ALA SEQRES 2 B 347 SER ARG ASP LEU LYS ASP ILE PRO ALA ARG TYR ILE ARG SEQRES 3 B 347 PRO GLU LEU GLU SER ASP VAL VAL TYR THR ASP GLU SER SEQRES 4 B 347 LEU GLU ILE PRO VAL ILE ASP LEU SER ARG LEU LEU ASP SEQRES 5 B 347 GLN GLN SER MET TYR GLU GLU LEU LYS LYS PHE GLN SER SEQRES 6 B 347 ALA CYS GLU ASP TRP GLY PHE PHE GLN LEU ILE ASN HIS SEQRES 7 B 347 GLY VAL PRO GLU GLU VAL ILE GLU LYS MET LYS VAL ASP SEQRES 8 B 347 VAL ASN ASP PHE PHE LYS LEU PRO LEU GLU GLU LYS LYS SEQRES 9 B 347 ALA TYR SER GLN LEU PRO ASN ASP LEU GLU GLY TYR GLY SEQRES 10 B 347 GLN ALA PHE VAL VAL SER GLU GLU GLN LYS LEU ASP TRP SEQRES 11 B 347 SER ASP MET PHE TYR LEU ARG ALA GLN PRO VAL ALA GLY SEQRES 12 B 347 ARG ASN MET THR LEU TRP PRO LYS TYR PRO THR SER PHE SEQRES 13 B 347 ARG ALA THR LEU ASP LYS TYR SER SER GLU THR GLN LYS SEQRES 14 B 347 VAL THR VAL CYS MET LEU GLY CYS MET ALA LYS ASN LEU SEQRES 15 B 347 GLY VAL ASP PRO ASN LYS LEU THR SER MET PHE GLU MET SEQRES 16 B 347 GLY SER VAL GLY VAL ARG MET ASN TYR TYR PRO PRO CYS SEQRES 17 B 347 VAL VAL ASN ALA ASP LYS VAL LEU GLY ILE SER PRO HIS SEQRES 18 B 347 SER ASP ALA VAL GLY ILE THR LEU LEU THR GLN VAL ASN SEQRES 19 B 347 GLU VAL GLN GLY LEU GLN ILE LYS LYS ASN GLY ASN TRP SEQRES 20 B 347 VAL PRO VAL LYS PRO ILE PRO GLY ALA PHE ILE VAL ASN SEQRES 21 B 347 ILE GLY ASP ILE ILE GLU ILE MET SER ASN GLY LYS TYR SEQRES 22 B 347 LYS SER ILE GLU HIS ARG ALA VAL ILE ASP PRO LEU ALA SEQRES 23 B 347 GLU ARG MET SER ILE ALA ALA PHE HIS SER PRO GLY ILE SEQRES 24 B 347 GLU THR LEU GLY PRO LEU PRO GLU LEU VAL LYS MET THR SEQRES 25 B 347 GLY GLY GLU GLU LYS TYR LYS THR LEU ASN TYR VAL GLU SEQRES 26 B 347 TYR LEU LYS LEU ILE PHE SER THR LYS LEU ASP GLY LYS SEQRES 27 B 347 ASN LEU LEU GLU PHE MET LYS LEU ASP HET AKG A 401 14 HET NI A 402 1 HET AKG B 401 14 HET NI B 402 1 HETNAM AKG 2-OXOGLUTARIC ACID HETNAM NI NICKEL (II) ION FORMUL 3 AKG 2(C5 H6 O5) FORMUL 4 NI 2(NI 2+) FORMUL 7 HOH *126(H2 O) HELIX 1 AA1 ASN A 8 ARG A 15 1 8 HELIX 2 AA2 PRO A 21 ILE A 25 5 5 HELIX 3 AA3 ARG A 26 ASP A 32 5 7 HELIX 4 AA4 LEU A 47 ASP A 52 1 6 HELIX 5 AA5 SER A 55 TRP A 70 1 16 HELIX 6 AA6 PRO A 81 LEU A 98 1 18 HELIX 7 AA7 PRO A 99 LYS A 104 1 6 HELIX 8 AA8 ALA A 105 SER A 107 5 3 HELIX 9 AA9 PRO A 140 ARG A 144 5 5 HELIX 10 AB1 ASN A 145 TRP A 149 5 5 HELIX 11 AB2 SER A 155 GLY A 183 1 29 HELIX 12 AB3 ASP A 185 MET A 195 1 11 HELIX 13 AB4 ASN A 211 VAL A 215 5 5 HELIX 14 AB5 GLY A 262 SER A 269 1 8 HELIX 15 AB6 TYR A 323 LEU A 327 1 5 HELIX 16 AB7 ASN A 339 LYS A 345 1 7 HELIX 17 AB8 ASN B 8 SER B 14 1 7 HELIX 18 AB9 PRO B 21 ILE B 25 5 5 HELIX 19 AC1 ARG B 26 SER B 31 5 6 HELIX 20 AC2 LEU B 47 ASP B 52 1 6 HELIX 21 AC3 SER B 55 TRP B 70 1 16 HELIX 22 AC4 PRO B 81 LYS B 97 1 17 HELIX 23 AC5 PRO B 99 LYS B 104 1 6 HELIX 24 AC6 ALA B 105 SER B 107 5 3 HELIX 25 AC7 ASN B 145 TRP B 149 5 5 HELIX 26 AC8 SER B 155 GLY B 183 1 29 HELIX 27 AC9 ASP B 185 MET B 195 1 11 HELIX 28 AD1 ASN B 211 LYS B 214 5 4 HELIX 29 AD2 GLY B 262 SER B 269 1 8 HELIX 30 AD3 GLU B 307 THR B 312 5 6 HELIX 31 AD4 TYR B 323 LEU B 327 1 5 HELIX 32 AD5 LEU B 340 LYS B 345 5 6 SHEET 1 AA1 8 VAL A 44 ASP A 46 0 SHEET 2 AA1 8 PHE A 72 ILE A 76 1 O GLN A 74 N ILE A 45 SHEET 3 AA1 8 PHE A 257 ILE A 261 -1 O PHE A 257 N LEU A 75 SHEET 4 AA1 8 ILE A 227 GLN A 232 -1 N LEU A 230 O ILE A 258 SHEET 5 AA1 8 ARG A 288 SER A 296 -1 O ILE A 291 N THR A 231 SHEET 6 AA1 8 SER A 197 TYR A 205 -1 N GLY A 199 O PHE A 294 SHEET 7 AA1 8 ASP A 132 GLN A 139 -1 N PHE A 134 O MET A 202 SHEET 8 AA1 8 GLY A 115 GLY A 117 -1 N GLY A 117 O MET A 133 SHEET 1 AA2 4 ILE A 218 HIS A 221 0 SHEET 2 AA2 4 HIS A 278 ALA A 280 -1 O HIS A 278 N HIS A 221 SHEET 3 AA2 4 LEU A 239 LYS A 243 -1 N GLN A 240 O ARG A 279 SHEET 4 AA2 4 ASN A 246 VAL A 250 -1 O VAL A 248 N ILE A 241 SHEET 1 AA3 2 THR A 301 LEU A 302 0 SHEET 2 AA3 2 LEU A 321 ASN A 322 -1 O LEU A 321 N LEU A 302 SHEET 1 AA4 8 VAL B 44 ASP B 46 0 SHEET 2 AA4 8 PHE B 72 ILE B 76 1 O GLN B 74 N ILE B 45 SHEET 3 AA4 8 PHE B 257 ILE B 261 -1 O VAL B 259 N PHE B 73 SHEET 4 AA4 8 ILE B 227 GLN B 232 -1 N LEU B 230 O ILE B 258 SHEET 5 AA4 8 ARG B 288 SER B 296 -1 O HIS B 295 N ILE B 227 SHEET 6 AA4 8 SER B 197 TYR B 205 -1 N TYR B 205 O ARG B 288 SHEET 7 AA4 8 ASP B 132 GLN B 139 -1 N PHE B 134 O MET B 202 SHEET 8 AA4 8 GLY B 115 GLY B 117 -1 N GLY B 115 O TYR B 135 SHEET 1 AA5 4 LEU B 216 HIS B 221 0 SHEET 2 AA5 4 HIS B 278 VAL B 281 -1 O HIS B 278 N HIS B 221 SHEET 3 AA5 4 LEU B 239 LYS B 243 -1 N GLN B 240 O ARG B 279 SHEET 4 AA5 4 ASN B 246 VAL B 250 -1 O VAL B 248 N ILE B 241 SHEET 1 AA6 2 THR B 301 LEU B 302 0 SHEET 2 AA6 2 LEU B 321 ASN B 322 -1 O LEU B 321 N LEU B 302 LINK NE2 HIS A 221 NI NI A 402 1555 1555 2.08 LINK OD1 ASP A 223 NI NI A 402 1555 1555 2.34 LINK NE2 HIS A 278 NI NI A 402 1555 1555 2.13 LINK O2 AKG A 401 NI NI A 402 1555 1555 1.91 LINK O5 AKG A 401 NI NI A 402 1555 1555 2.10 LINK NI NI A 402 O HOH A 515 1555 1555 2.61 LINK NE2 HIS B 221 NI NI B 402 1555 1555 1.97 LINK OD1 ASP B 223 NI NI B 402 1555 1555 2.27 LINK NE2 HIS B 278 NI NI B 402 1555 1555 1.98 LINK O1 AKG B 401 NI NI B 402 1555 1555 1.98 LINK O5 AKG B 401 NI NI B 402 1555 1555 2.14 LINK NI NI B 402 O HOH B 506 1555 1555 2.00 CISPEP 1 GLN A 139 PRO A 140 0 1.62 CISPEP 2 TYR A 152 PRO A 153 0 -4.96 CISPEP 3 GLN B 139 PRO B 140 0 -0.36 CISPEP 4 TYR B 152 PRO B 153 0 -7.80 CRYST1 67.240 75.850 149.170 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014872 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013184 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006704 0.00000 MTRIX1 1 0.909477 0.307880 -0.279396 -6.83575 1 MTRIX2 1 0.331409 -0.942637 0.040051 21.47932 1 MTRIX3 1 -0.251038 -0.129020 -0.959340 -30.63316 1 CONECT 1756 5499 CONECT 1769 5499 CONECT 2191 5499 CONECT 4501 5514 CONECT 4514 5514 CONECT 4936 5514 CONECT 5485 5486 5487 5488 CONECT 5486 5485 CONECT 5487 5485 5499 CONECT 5488 5485 5489 5490 CONECT 5489 5488 5499 CONECT 5490 5488 5491 5495 5496 CONECT 5491 5490 5492 5497 5498 CONECT 5492 5491 5493 5494 CONECT 5493 5492 CONECT 5494 5492 CONECT 5495 5490 CONECT 5496 5490 CONECT 5497 5491 CONECT 5498 5491 CONECT 5499 1756 1769 2191 5487 CONECT 5499 5489 5529 CONECT 5500 5501 5502 5503 CONECT 5501 5500 5514 CONECT 5502 5500 CONECT 5503 5500 5504 5505 CONECT 5504 5503 5514 CONECT 5505 5503 5506 5510 5511 CONECT 5506 5505 5507 5512 5513 CONECT 5507 5506 5508 5509 CONECT 5508 5507 CONECT 5509 5507 CONECT 5510 5505 CONECT 5511 5505 CONECT 5512 5506 CONECT 5513 5506 CONECT 5514 4501 4514 4936 5501 CONECT 5514 5504 5582 CONECT 5529 5499 CONECT 5582 5514 MASTER 311 0 4 32 28 0 0 9 5630 2 40 54 END