data_9VKN # _entry.id 9VKN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9VKN pdb_00009vkn 10.2210/pdb9vkn/pdb WWPDB D_1300060896 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-08-06 ? 2 'Structure model' 1 1 2025-11-19 ? 3 'Structure model' 1 2 2025-12-03 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation.year' 9 3 'Structure model' '_citation.journal_volume' 10 3 'Structure model' '_citation.page_first' 11 3 'Structure model' '_citation.page_last' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9VKN _pdbx_database_status.recvd_initial_deposition_date 2025-06-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 3 _pdbx_contact_author.email sunpengkai@sxtcm.edu.cn _pdbx_contact_author.name_first Pengkai _pdbx_contact_author.name_last Sun _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2478-9109 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sun, P.' 1 ? 'Wang, B.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Chem Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2451-9456 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 32 _citation.language ? _citation.page_first 1397 _citation.page_last 1411.e7 _citation.title 'Development of D2HG biosensors inspired by the molecular mechanism of D2HG regulation of DhdR.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2025.10.004 _citation.pdbx_database_id_PubMed 41202821 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, B.' 1 ? primary 'Luo, S.' 2 ? primary 'Sun, P.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Pyruvate dehydrogenase complex repressor' 16437.400 2 ? ? ? ? 2 non-polymer syn '(2S)-2-HYDROXYPENTANEDIOIC ACID' 148.114 2 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 5 water nat water 18.015 28 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name DhdR # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VSAGLDDREQLASVYELRMELEGGAAALAARRRNATDLAAMAEALAALEANLDHPEQGVEHDIAFHVAIAAATHNRYYQD LLQYLNLQLRLAVSTARTNSRRQEGLTAVVHQEHVAVYDAILAGDPDRARLAATRHLQQAASRLRLDLLS ; _entity_poly.pdbx_seq_one_letter_code_can ;VSAGLDDREQLASVYELRMELEGGAAALAARRRNATDLAAMAEALAALEANLDHPEQGVEHDIAFHVAIAAATHNRYYQD LLQYLNLQLRLAVSTARTNSRRQEGLTAVVHQEHVAVYDAILAGDPDRARLAATRHLQQAASRLRLDLLS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2S)-2-HYDROXYPENTANEDIOIC ACID' S2G 3 'ZINC ION' ZN 4 'CHLORIDE ION' CL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 SER n 1 3 ALA n 1 4 GLY n 1 5 LEU n 1 6 ASP n 1 7 ASP n 1 8 ARG n 1 9 GLU n 1 10 GLN n 1 11 LEU n 1 12 ALA n 1 13 SER n 1 14 VAL n 1 15 TYR n 1 16 GLU n 1 17 LEU n 1 18 ARG n 1 19 MET n 1 20 GLU n 1 21 LEU n 1 22 GLU n 1 23 GLY n 1 24 GLY n 1 25 ALA n 1 26 ALA n 1 27 ALA n 1 28 LEU n 1 29 ALA n 1 30 ALA n 1 31 ARG n 1 32 ARG n 1 33 ARG n 1 34 ASN n 1 35 ALA n 1 36 THR n 1 37 ASP n 1 38 LEU n 1 39 ALA n 1 40 ALA n 1 41 MET n 1 42 ALA n 1 43 GLU n 1 44 ALA n 1 45 LEU n 1 46 ALA n 1 47 ALA n 1 48 LEU n 1 49 GLU n 1 50 ALA n 1 51 ASN n 1 52 LEU n 1 53 ASP n 1 54 HIS n 1 55 PRO n 1 56 GLU n 1 57 GLN n 1 58 GLY n 1 59 VAL n 1 60 GLU n 1 61 HIS n 1 62 ASP n 1 63 ILE n 1 64 ALA n 1 65 PHE n 1 66 HIS n 1 67 VAL n 1 68 ALA n 1 69 ILE n 1 70 ALA n 1 71 ALA n 1 72 ALA n 1 73 THR n 1 74 HIS n 1 75 ASN n 1 76 ARG n 1 77 TYR n 1 78 TYR n 1 79 GLN n 1 80 ASP n 1 81 LEU n 1 82 LEU n 1 83 GLN n 1 84 TYR n 1 85 LEU n 1 86 ASN n 1 87 LEU n 1 88 GLN n 1 89 LEU n 1 90 ARG n 1 91 LEU n 1 92 ALA n 1 93 VAL n 1 94 SER n 1 95 THR n 1 96 ALA n 1 97 ARG n 1 98 THR n 1 99 ASN n 1 100 SER n 1 101 ARG n 1 102 ARG n 1 103 GLN n 1 104 GLU n 1 105 GLY n 1 106 LEU n 1 107 THR n 1 108 ALA n 1 109 VAL n 1 110 VAL n 1 111 HIS n 1 112 GLN n 1 113 GLU n 1 114 HIS n 1 115 VAL n 1 116 ALA n 1 117 VAL n 1 118 TYR n 1 119 ASP n 1 120 ALA n 1 121 ILE n 1 122 LEU n 1 123 ALA n 1 124 GLY n 1 125 ASP n 1 126 PRO n 1 127 ASP n 1 128 ARG n 1 129 ALA n 1 130 ARG n 1 131 LEU n 1 132 ALA n 1 133 ALA n 1 134 THR n 1 135 ARG n 1 136 HIS n 1 137 LEU n 1 138 GLN n 1 139 GLN n 1 140 ALA n 1 141 ALA n 1 142 SER n 1 143 ARG n 1 144 LEU n 1 145 ARG n 1 146 LEU n 1 147 ASP n 1 148 LEU n 1 149 LEU n 1 150 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 150 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene FOC81_30220 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Achromobacter denitrificans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32002 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 S2G non-polymer . '(2S)-2-HYDROXYPENTANEDIOIC ACID' ? 'C5 H8 O5' 148.114 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 82 ? ? ? A . n A 1 2 SER 2 83 ? ? ? A . n A 1 3 ALA 3 84 84 ALA ALA A . n A 1 4 GLY 4 85 85 GLY GLY A . n A 1 5 LEU 5 86 86 LEU LEU A . n A 1 6 ASP 6 87 87 ASP ASP A . n A 1 7 ASP 7 88 88 ASP ASP A . n A 1 8 ARG 8 89 89 ARG ARG A . n A 1 9 GLU 9 90 90 GLU GLU A . n A 1 10 GLN 10 91 91 GLN GLN A . n A 1 11 LEU 11 92 92 LEU LEU A . n A 1 12 ALA 12 93 93 ALA ALA A . n A 1 13 SER 13 94 94 SER SER A . n A 1 14 VAL 14 95 95 VAL VAL A . n A 1 15 TYR 15 96 96 TYR TYR A . n A 1 16 GLU 16 97 97 GLU GLU A . n A 1 17 LEU 17 98 98 LEU LEU A . n A 1 18 ARG 18 99 99 ARG ARG A . n A 1 19 MET 19 100 100 MET MET A . n A 1 20 GLU 20 101 101 GLU GLU A . n A 1 21 LEU 21 102 102 LEU LEU A . n A 1 22 GLU 22 103 103 GLU GLU A . n A 1 23 GLY 23 104 104 GLY GLY A . n A 1 24 GLY 24 105 105 GLY GLY A . n A 1 25 ALA 25 106 106 ALA ALA A . n A 1 26 ALA 26 107 107 ALA ALA A . n A 1 27 ALA 27 108 108 ALA ALA A . n A 1 28 LEU 28 109 109 LEU LEU A . n A 1 29 ALA 29 110 110 ALA ALA A . n A 1 30 ALA 30 111 111 ALA ALA A . n A 1 31 ARG 31 112 112 ARG ARG A . n A 1 32 ARG 32 113 113 ARG ARG A . n A 1 33 ARG 33 114 114 ARG ARG A . n A 1 34 ASN 34 115 115 ASN ASN A . n A 1 35 ALA 35 116 116 ALA ALA A . n A 1 36 THR 36 117 117 THR THR A . n A 1 37 ASP 37 118 118 ASP ASP A . n A 1 38 LEU 38 119 119 LEU LEU A . n A 1 39 ALA 39 120 120 ALA ALA A . n A 1 40 ALA 40 121 121 ALA ALA A . n A 1 41 MET 41 122 122 MET MET A . n A 1 42 ALA 42 123 123 ALA ALA A . n A 1 43 GLU 43 124 124 GLU GLU A . n A 1 44 ALA 44 125 125 ALA ALA A . n A 1 45 LEU 45 126 126 LEU LEU A . n A 1 46 ALA 46 127 127 ALA ALA A . n A 1 47 ALA 47 128 128 ALA ALA A . n A 1 48 LEU 48 129 129 LEU LEU A . n A 1 49 GLU 49 130 130 GLU GLU A . n A 1 50 ALA 50 131 131 ALA ALA A . n A 1 51 ASN 51 132 132 ASN ASN A . n A 1 52 LEU 52 133 133 LEU LEU A . n A 1 53 ASP 53 134 134 ASP ASP A . n A 1 54 HIS 54 135 135 HIS HIS A . n A 1 55 PRO 55 136 136 PRO PRO A . n A 1 56 GLU 56 137 137 GLU GLU A . n A 1 57 GLN 57 138 138 GLN GLN A . n A 1 58 GLY 58 139 139 GLY GLY A . n A 1 59 VAL 59 140 140 VAL VAL A . n A 1 60 GLU 60 141 141 GLU GLU A . n A 1 61 HIS 61 142 142 HIS HIS A . n A 1 62 ASP 62 143 143 ASP ASP A . n A 1 63 ILE 63 144 144 ILE ILE A . n A 1 64 ALA 64 145 145 ALA ALA A . n A 1 65 PHE 65 146 146 PHE PHE A . n A 1 66 HIS 66 147 147 HIS HIS A . n A 1 67 VAL 67 148 148 VAL VAL A . n A 1 68 ALA 68 149 149 ALA ALA A . n A 1 69 ILE 69 150 150 ILE ILE A . n A 1 70 ALA 70 151 151 ALA ALA A . n A 1 71 ALA 71 152 152 ALA ALA A . n A 1 72 ALA 72 153 153 ALA ALA A . n A 1 73 THR 73 154 154 THR THR A . n A 1 74 HIS 74 155 155 HIS HIS A . n A 1 75 ASN 75 156 156 ASN ASN A . n A 1 76 ARG 76 157 157 ARG ARG A . n A 1 77 TYR 77 158 158 TYR TYR A . n A 1 78 TYR 78 159 159 TYR TYR A . n A 1 79 GLN 79 160 160 GLN GLN A . n A 1 80 ASP 80 161 161 ASP ASP A . n A 1 81 LEU 81 162 162 LEU LEU A . n A 1 82 LEU 82 163 163 LEU LEU A . n A 1 83 GLN 83 164 164 GLN GLN A . n A 1 84 TYR 84 165 165 TYR TYR A . n A 1 85 LEU 85 166 166 LEU LEU A . n A 1 86 ASN 86 167 167 ASN ASN A . n A 1 87 LEU 87 168 168 LEU LEU A . n A 1 88 GLN 88 169 169 GLN GLN A . n A 1 89 LEU 89 170 170 LEU LEU A . n A 1 90 ARG 90 171 171 ARG ARG A . n A 1 91 LEU 91 172 172 LEU LEU A . n A 1 92 ALA 92 173 173 ALA ALA A . n A 1 93 VAL 93 174 174 VAL VAL A . n A 1 94 SER 94 175 175 SER SER A . n A 1 95 THR 95 176 176 THR THR A . n A 1 96 ALA 96 177 177 ALA ALA A . n A 1 97 ARG 97 178 178 ARG ARG A . n A 1 98 THR 98 179 179 THR THR A . n A 1 99 ASN 99 180 180 ASN ASN A . n A 1 100 SER 100 181 181 SER SER A . n A 1 101 ARG 101 182 182 ARG ARG A . n A 1 102 ARG 102 183 183 ARG ARG A . n A 1 103 GLN 103 184 184 GLN GLN A . n A 1 104 GLU 104 185 185 GLU GLU A . n A 1 105 GLY 105 186 186 GLY GLY A . n A 1 106 LEU 106 187 187 LEU LEU A . n A 1 107 THR 107 188 188 THR THR A . n A 1 108 ALA 108 189 189 ALA ALA A . n A 1 109 VAL 109 190 190 VAL VAL A . n A 1 110 VAL 110 191 191 VAL VAL A . n A 1 111 HIS 111 192 192 HIS HIS A . n A 1 112 GLN 112 193 193 GLN GLN A . n A 1 113 GLU 113 194 194 GLU GLU A . n A 1 114 HIS 114 195 195 HIS HIS A . n A 1 115 VAL 115 196 196 VAL VAL A . n A 1 116 ALA 116 197 197 ALA ALA A . n A 1 117 VAL 117 198 198 VAL VAL A . n A 1 118 TYR 118 199 199 TYR TYR A . n A 1 119 ASP 119 200 200 ASP ASP A . n A 1 120 ALA 120 201 201 ALA ALA A . n A 1 121 ILE 121 202 202 ILE ILE A . n A 1 122 LEU 122 203 203 LEU LEU A . n A 1 123 ALA 123 204 204 ALA ALA A . n A 1 124 GLY 124 205 205 GLY GLY A . n A 1 125 ASP 125 206 206 ASP ASP A . n A 1 126 PRO 126 207 207 PRO PRO A . n A 1 127 ASP 127 208 208 ASP ASP A . n A 1 128 ARG 128 209 209 ARG ARG A . n A 1 129 ALA 129 210 210 ALA ALA A . n A 1 130 ARG 130 211 211 ARG ARG A . n A 1 131 LEU 131 212 212 LEU LEU A . n A 1 132 ALA 132 213 213 ALA ALA A . n A 1 133 ALA 133 214 214 ALA ALA A . n A 1 134 THR 134 215 215 THR THR A . n A 1 135 ARG 135 216 216 ARG ARG A . n A 1 136 HIS 136 217 217 HIS HIS A . n A 1 137 LEU 137 218 218 LEU LEU A . n A 1 138 GLN 138 219 219 GLN GLN A . n A 1 139 GLN 139 220 220 GLN GLN A . n A 1 140 ALA 140 221 221 ALA ALA A . n A 1 141 ALA 141 222 222 ALA ALA A . n A 1 142 SER 142 223 223 SER SER A . n A 1 143 ARG 143 224 224 ARG ARG A . n A 1 144 LEU 144 225 225 LEU LEU A . n A 1 145 ARG 145 226 226 ARG ARG A . n A 1 146 LEU 146 227 227 LEU LEU A . n A 1 147 ASP 147 228 228 ASP ASP A . n A 1 148 LEU 148 229 229 LEU LEU A . n A 1 149 LEU 149 230 ? ? ? A . n A 1 150 SER 150 231 ? ? ? A . n B 1 1 VAL 1 82 ? ? ? B . n B 1 2 SER 2 83 ? ? ? B . n B 1 3 ALA 3 84 ? ? ? B . n B 1 4 GLY 4 85 ? ? ? B . n B 1 5 LEU 5 86 86 LEU LEU B . n B 1 6 ASP 6 87 87 ASP ASP B . n B 1 7 ASP 7 88 88 ASP ASP B . n B 1 8 ARG 8 89 89 ARG ARG B . n B 1 9 GLU 9 90 90 GLU GLU B . n B 1 10 GLN 10 91 91 GLN GLN B . n B 1 11 LEU 11 92 92 LEU LEU B . n B 1 12 ALA 12 93 93 ALA ALA B . n B 1 13 SER 13 94 94 SER SER B . n B 1 14 VAL 14 95 95 VAL VAL B . n B 1 15 TYR 15 96 96 TYR TYR B . n B 1 16 GLU 16 97 97 GLU GLU B . n B 1 17 LEU 17 98 98 LEU LEU B . n B 1 18 ARG 18 99 99 ARG ARG B . n B 1 19 MET 19 100 100 MET MET B . n B 1 20 GLU 20 101 101 GLU GLU B . n B 1 21 LEU 21 102 102 LEU LEU B . n B 1 22 GLU 22 103 103 GLU GLU B . n B 1 23 GLY 23 104 104 GLY GLY B . n B 1 24 GLY 24 105 105 GLY GLY B . n B 1 25 ALA 25 106 106 ALA ALA B . n B 1 26 ALA 26 107 107 ALA ALA B . n B 1 27 ALA 27 108 108 ALA ALA B . n B 1 28 LEU 28 109 109 LEU LEU B . n B 1 29 ALA 29 110 110 ALA ALA B . n B 1 30 ALA 30 111 111 ALA ALA B . n B 1 31 ARG 31 112 112 ARG ARG B . n B 1 32 ARG 32 113 113 ARG ARG B . n B 1 33 ARG 33 114 114 ARG ARG B . n B 1 34 ASN 34 115 115 ASN ASN B . n B 1 35 ALA 35 116 116 ALA ALA B . n B 1 36 THR 36 117 117 THR THR B . n B 1 37 ASP 37 118 118 ASP ASP B . n B 1 38 LEU 38 119 119 LEU LEU B . n B 1 39 ALA 39 120 120 ALA ALA B . n B 1 40 ALA 40 121 121 ALA ALA B . n B 1 41 MET 41 122 122 MET MET B . n B 1 42 ALA 42 123 123 ALA ALA B . n B 1 43 GLU 43 124 124 GLU GLU B . n B 1 44 ALA 44 125 125 ALA ALA B . n B 1 45 LEU 45 126 126 LEU LEU B . n B 1 46 ALA 46 127 127 ALA ALA B . n B 1 47 ALA 47 128 128 ALA ALA B . n B 1 48 LEU 48 129 129 LEU LEU B . n B 1 49 GLU 49 130 130 GLU GLU B . n B 1 50 ALA 50 131 131 ALA ALA B . n B 1 51 ASN 51 132 132 ASN ASN B . n B 1 52 LEU 52 133 133 LEU LEU B . n B 1 53 ASP 53 134 134 ASP ASP B . n B 1 54 HIS 54 135 135 HIS HIS B . n B 1 55 PRO 55 136 136 PRO PRO B . n B 1 56 GLU 56 137 137 GLU GLU B . n B 1 57 GLN 57 138 138 GLN GLN B . n B 1 58 GLY 58 139 139 GLY GLY B . n B 1 59 VAL 59 140 140 VAL VAL B . n B 1 60 GLU 60 141 141 GLU GLU B . n B 1 61 HIS 61 142 142 HIS HIS B . n B 1 62 ASP 62 143 143 ASP ASP B . n B 1 63 ILE 63 144 144 ILE ILE B . n B 1 64 ALA 64 145 145 ALA ALA B . n B 1 65 PHE 65 146 146 PHE PHE B . n B 1 66 HIS 66 147 147 HIS HIS B . n B 1 67 VAL 67 148 148 VAL VAL B . n B 1 68 ALA 68 149 149 ALA ALA B . n B 1 69 ILE 69 150 150 ILE ILE B . n B 1 70 ALA 70 151 151 ALA ALA B . n B 1 71 ALA 71 152 152 ALA ALA B . n B 1 72 ALA 72 153 153 ALA ALA B . n B 1 73 THR 73 154 154 THR THR B . n B 1 74 HIS 74 155 155 HIS HIS B . n B 1 75 ASN 75 156 156 ASN ASN B . n B 1 76 ARG 76 157 157 ARG ARG B . n B 1 77 TYR 77 158 158 TYR TYR B . n B 1 78 TYR 78 159 159 TYR TYR B . n B 1 79 GLN 79 160 160 GLN GLN B . n B 1 80 ASP 80 161 161 ASP ASP B . n B 1 81 LEU 81 162 162 LEU LEU B . n B 1 82 LEU 82 163 163 LEU LEU B . n B 1 83 GLN 83 164 164 GLN GLN B . n B 1 84 TYR 84 165 165 TYR TYR B . n B 1 85 LEU 85 166 166 LEU LEU B . n B 1 86 ASN 86 167 167 ASN ASN B . n B 1 87 LEU 87 168 168 LEU LEU B . n B 1 88 GLN 88 169 169 GLN GLN B . n B 1 89 LEU 89 170 170 LEU LEU B . n B 1 90 ARG 90 171 171 ARG ARG B . n B 1 91 LEU 91 172 172 LEU LEU B . n B 1 92 ALA 92 173 173 ALA ALA B . n B 1 93 VAL 93 174 174 VAL VAL B . n B 1 94 SER 94 175 175 SER SER B . n B 1 95 THR 95 176 176 THR THR B . n B 1 96 ALA 96 177 177 ALA ALA B . n B 1 97 ARG 97 178 178 ARG ARG B . n B 1 98 THR 98 179 179 THR THR B . n B 1 99 ASN 99 180 180 ASN ASN B . n B 1 100 SER 100 181 181 SER SER B . n B 1 101 ARG 101 182 182 ARG ARG B . n B 1 102 ARG 102 183 183 ARG ARG B . n B 1 103 GLN 103 184 184 GLN GLN B . n B 1 104 GLU 104 185 185 GLU GLU B . n B 1 105 GLY 105 186 186 GLY GLY B . n B 1 106 LEU 106 187 187 LEU LEU B . n B 1 107 THR 107 188 188 THR THR B . n B 1 108 ALA 108 189 189 ALA ALA B . n B 1 109 VAL 109 190 190 VAL VAL B . n B 1 110 VAL 110 191 191 VAL VAL B . n B 1 111 HIS 111 192 192 HIS HIS B . n B 1 112 GLN 112 193 193 GLN GLN B . n B 1 113 GLU 113 194 194 GLU GLU B . n B 1 114 HIS 114 195 195 HIS HIS B . n B 1 115 VAL 115 196 196 VAL VAL B . n B 1 116 ALA 116 197 197 ALA ALA B . n B 1 117 VAL 117 198 198 VAL VAL B . n B 1 118 TYR 118 199 199 TYR TYR B . n B 1 119 ASP 119 200 200 ASP ASP B . n B 1 120 ALA 120 201 201 ALA ALA B . n B 1 121 ILE 121 202 202 ILE ILE B . n B 1 122 LEU 122 203 203 LEU LEU B . n B 1 123 ALA 123 204 204 ALA ALA B . n B 1 124 GLY 124 205 205 GLY GLY B . n B 1 125 ASP 125 206 206 ASP ASP B . n B 1 126 PRO 126 207 207 PRO PRO B . n B 1 127 ASP 127 208 208 ASP ASP B . n B 1 128 ARG 128 209 209 ARG ARG B . n B 1 129 ALA 129 210 210 ALA ALA B . n B 1 130 ARG 130 211 211 ARG ARG B . n B 1 131 LEU 131 212 212 LEU LEU B . n B 1 132 ALA 132 213 213 ALA ALA B . n B 1 133 ALA 133 214 214 ALA ALA B . n B 1 134 THR 134 215 215 THR THR B . n B 1 135 ARG 135 216 216 ARG ARG B . n B 1 136 HIS 136 217 217 HIS HIS B . n B 1 137 LEU 137 218 218 LEU LEU B . n B 1 138 GLN 138 219 219 GLN GLN B . n B 1 139 GLN 139 220 220 GLN GLN B . n B 1 140 ALA 140 221 221 ALA ALA B . n B 1 141 ALA 141 222 222 ALA ALA B . n B 1 142 SER 142 223 223 SER SER B . n B 1 143 ARG 143 224 224 ARG ARG B . n B 1 144 LEU 144 225 225 LEU LEU B . n B 1 145 ARG 145 226 226 ARG ARG B . n B 1 146 LEU 146 227 227 LEU LEU B . n B 1 147 ASP 147 228 228 ASP ASP B . n B 1 148 LEU 148 229 229 LEU LEU B . n B 1 149 LEU 149 230 ? ? ? B . n B 1 150 SER 150 231 ? ? ? B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id S2G _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id S2G _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 S2G 1 301 1 S2G S2G A . D 3 ZN 1 302 1 ZN ZN A . E 4 CL 1 303 1 CL CL A . F 2 S2G 1 301 2 S2G S2G B . G 3 ZN 1 302 2 ZN ZN B . H 4 CL 1 303 2 CL CL B . I 5 HOH 1 401 16 HOH HOH A . I 5 HOH 2 402 18 HOH HOH A . I 5 HOH 3 403 15 HOH HOH A . I 5 HOH 4 404 25 HOH HOH A . I 5 HOH 5 405 27 HOH HOH A . I 5 HOH 6 406 6 HOH HOH A . I 5 HOH 7 407 14 HOH HOH A . I 5 HOH 8 408 5 HOH HOH A . I 5 HOH 9 409 3 HOH HOH A . I 5 HOH 10 410 10 HOH HOH A . I 5 HOH 11 411 17 HOH HOH A . I 5 HOH 12 412 26 HOH HOH A . I 5 HOH 13 413 24 HOH HOH A . I 5 HOH 14 414 11 HOH HOH A . I 5 HOH 15 415 20 HOH HOH A . I 5 HOH 16 416 8 HOH HOH A . I 5 HOH 17 417 12 HOH HOH A . I 5 HOH 18 418 21 HOH HOH A . I 5 HOH 19 419 19 HOH HOH A . J 5 HOH 1 401 13 HOH HOH B . J 5 HOH 2 402 2 HOH HOH B . J 5 HOH 3 403 9 HOH HOH B . J 5 HOH 4 404 4 HOH HOH B . J 5 HOH 5 405 1 HOH HOH B . J 5 HOH 6 406 22 HOH HOH B . J 5 HOH 7 407 23 HOH HOH B . J 5 HOH 8 408 28 HOH HOH B . J 5 HOH 9 409 7 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 86 ? CG ? A LEU 5 CG 2 1 Y 1 A LEU 86 ? CD1 ? A LEU 5 CD1 3 1 Y 1 A LEU 86 ? CD2 ? A LEU 5 CD2 4 1 Y 1 A ASP 87 ? CG ? A ASP 6 CG 5 1 Y 1 A ASP 87 ? OD1 ? A ASP 6 OD1 6 1 Y 1 A ASP 87 ? OD2 ? A ASP 6 OD2 7 1 Y 1 A GLN 91 ? CG ? A GLN 10 CG 8 1 Y 1 A GLN 91 ? CD ? A GLN 10 CD 9 1 Y 1 A GLN 91 ? OE1 ? A GLN 10 OE1 10 1 Y 1 A GLN 91 ? NE2 ? A GLN 10 NE2 11 1 Y 1 A ARG 112 ? CG ? A ARG 31 CG 12 1 Y 1 A ARG 112 ? CD ? A ARG 31 CD 13 1 Y 1 A ARG 112 ? NE ? A ARG 31 NE 14 1 Y 1 A ARG 112 ? CZ ? A ARG 31 CZ 15 1 Y 1 A ARG 112 ? NH1 ? A ARG 31 NH1 16 1 Y 1 A ARG 112 ? NH2 ? A ARG 31 NH2 17 1 Y 1 A ASP 134 ? CG ? A ASP 53 CG 18 1 Y 1 A ASP 134 ? OD1 ? A ASP 53 OD1 19 1 Y 1 A ASP 134 ? OD2 ? A ASP 53 OD2 20 1 Y 1 A GLU 137 ? CG ? A GLU 56 CG 21 1 Y 1 A GLU 137 ? CD ? A GLU 56 CD 22 1 Y 1 A GLU 137 ? OE1 ? A GLU 56 OE1 23 1 Y 1 A GLU 137 ? OE2 ? A GLU 56 OE2 24 1 Y 1 A ARG 182 ? CG ? A ARG 101 CG 25 1 Y 1 A ARG 182 ? CD ? A ARG 101 CD 26 1 Y 1 A ARG 182 ? NE ? A ARG 101 NE 27 1 Y 1 A ARG 182 ? CZ ? A ARG 101 CZ 28 1 Y 1 A ARG 182 ? NH1 ? A ARG 101 NH1 29 1 Y 1 A ARG 182 ? NH2 ? A ARG 101 NH2 30 1 Y 1 A ARG 226 ? CG ? A ARG 145 CG 31 1 Y 1 A ARG 226 ? CD ? A ARG 145 CD 32 1 Y 1 A ARG 226 ? NE ? A ARG 145 NE 33 1 Y 1 A ARG 226 ? CZ ? A ARG 145 CZ 34 1 Y 1 A ARG 226 ? NH1 ? A ARG 145 NH1 35 1 Y 1 A ARG 226 ? NH2 ? A ARG 145 NH2 36 1 Y 1 A ASP 228 ? CG ? A ASP 147 CG 37 1 Y 1 A ASP 228 ? OD1 ? A ASP 147 OD1 38 1 Y 1 A ASP 228 ? OD2 ? A ASP 147 OD2 39 1 Y 1 B LEU 86 ? CG ? B LEU 5 CG 40 1 Y 1 B LEU 86 ? CD1 ? B LEU 5 CD1 41 1 Y 1 B LEU 86 ? CD2 ? B LEU 5 CD2 42 1 Y 1 B ASP 87 ? CG ? B ASP 6 CG 43 1 Y 1 B ASP 87 ? OD1 ? B ASP 6 OD1 44 1 Y 1 B ASP 87 ? OD2 ? B ASP 6 OD2 45 1 Y 1 B ASP 88 ? CG ? B ASP 7 CG 46 1 Y 1 B ASP 88 ? OD1 ? B ASP 7 OD1 47 1 Y 1 B ASP 88 ? OD2 ? B ASP 7 OD2 48 1 Y 1 B ARG 89 ? CG ? B ARG 8 CG 49 1 Y 1 B ARG 89 ? CD ? B ARG 8 CD 50 1 Y 1 B ARG 89 ? NE ? B ARG 8 NE 51 1 Y 1 B ARG 89 ? CZ ? B ARG 8 CZ 52 1 Y 1 B ARG 89 ? NH1 ? B ARG 8 NH1 53 1 Y 1 B ARG 89 ? NH2 ? B ARG 8 NH2 54 1 Y 1 B GLU 90 ? CG ? B GLU 9 CG 55 1 Y 1 B GLU 90 ? CD ? B GLU 9 CD 56 1 Y 1 B GLU 90 ? OE1 ? B GLU 9 OE1 57 1 Y 1 B GLU 90 ? OE2 ? B GLU 9 OE2 58 1 Y 1 B ASP 134 ? CG ? B ASP 53 CG 59 1 Y 1 B ASP 134 ? OD1 ? B ASP 53 OD1 60 1 Y 1 B ASP 134 ? OD2 ? B ASP 53 OD2 61 1 Y 1 B HIS 135 ? CG ? B HIS 54 CG 62 1 Y 1 B HIS 135 ? ND1 ? B HIS 54 ND1 63 1 Y 1 B HIS 135 ? CD2 ? B HIS 54 CD2 64 1 Y 1 B HIS 135 ? CE1 ? B HIS 54 CE1 65 1 Y 1 B HIS 135 ? NE2 ? B HIS 54 NE2 66 1 Y 1 B GLU 137 ? CG ? B GLU 56 CG 67 1 Y 1 B GLU 137 ? CD ? B GLU 56 CD 68 1 Y 1 B GLU 137 ? OE1 ? B GLU 56 OE1 69 1 Y 1 B GLU 137 ? OE2 ? B GLU 56 OE2 70 1 Y 1 B GLN 138 ? CG ? B GLN 57 CG 71 1 Y 1 B GLN 138 ? CD ? B GLN 57 CD 72 1 Y 1 B GLN 138 ? OE1 ? B GLN 57 OE1 73 1 Y 1 B GLN 138 ? NE2 ? B GLN 57 NE2 74 1 Y 1 B GLU 141 ? CG ? B GLU 60 CG 75 1 Y 1 B GLU 141 ? CD ? B GLU 60 CD 76 1 Y 1 B GLU 141 ? OE1 ? B GLU 60 OE1 77 1 Y 1 B GLU 141 ? OE2 ? B GLU 60 OE2 78 1 Y 1 B ARG 157 ? CG ? B ARG 76 CG 79 1 Y 1 B ARG 157 ? CD ? B ARG 76 CD 80 1 Y 1 B ARG 157 ? NE ? B ARG 76 NE 81 1 Y 1 B ARG 157 ? CZ ? B ARG 76 CZ 82 1 Y 1 B ARG 157 ? NH1 ? B ARG 76 NH1 83 1 Y 1 B ARG 157 ? NH2 ? B ARG 76 NH2 84 1 Y 1 B GLU 185 ? CG ? B GLU 104 CG 85 1 Y 1 B GLU 185 ? CD ? B GLU 104 CD 86 1 Y 1 B GLU 185 ? OE1 ? B GLU 104 OE1 87 1 Y 1 B GLU 185 ? OE2 ? B GLU 104 OE2 88 1 Y 1 B ARG 226 ? CG ? B ARG 145 CG 89 1 Y 1 B ARG 226 ? CD ? B ARG 145 CD 90 1 Y 1 B ARG 226 ? NE ? B ARG 145 NE 91 1 Y 1 B ARG 226 ? CZ ? B ARG 145 CZ 92 1 Y 1 B ARG 226 ? NH1 ? B ARG 145 NH1 93 1 Y 1 B ARG 226 ? NH2 ? B ARG 145 NH2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 ? 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . ? 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . ? 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? . ? 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9VKN _cell.details ? _cell.formula_units_Z ? _cell.length_a 126.984 _cell.length_a_esd ? _cell.length_b 126.984 _cell.length_b_esd ? _cell.length_c 39.776 _cell.length_c_esd ? _cell.volume 641385.465 _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9VKN _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9VKN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.8 M Ammonium phosphate monobasic; 0.1 M Sodium acetate trihydrate pH 4.6' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2025-06-20 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97853 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL18U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97853 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL18U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 35.62 _reflns.entry_id 9VKN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.24 _reflns.d_resolution_low 90.18 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16262 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 20 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 28.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.05 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.089 _reflns.pdbx_Rpim_I_all 0.019 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.087 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.24 _reflns_shell.d_res_low 2.37 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all 28584 _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2200 _reflns_shell.percent_possible_obs 94.0 _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 13.0 _reflns_shell.pdbx_chi_squared 0.84 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs 4.2 _reflns_shell.pdbx_Rrim_I_all 0.707 _reflns_shell.pdbx_Rpim_I_all 0.197 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.929 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.677 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 55.26 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9VKN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.44 _refine.ls_d_res_low 24.81 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12674 _refine.ls_number_reflns_R_free 639 _refine.ls_number_reflns_R_work 12035 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.73 _refine.ls_percent_reflns_R_free 5.04 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2003 _refine.ls_R_factor_R_free 0.2396 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1981 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.2142 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2154 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.44 _refine_hist.d_res_low 24.81 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 2206 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2154 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0081 ? 2199 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.9768 ? 2991 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0499 ? 357 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0062 ? 400 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 24.4299 ? 769 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.44 2.62 . . 123 2352 99.60 . . . . 0.2185 . . . . . . . . . . . . . . . 0.2613 'X-RAY DIFFRACTION' 2.62 2.89 . . 106 2386 100.00 . . . . 0.2355 . . . . . . . . . . . . . . . 0.2741 'X-RAY DIFFRACTION' 2.89 3.30 . . 129 2370 99.96 . . . . 0.2363 . . . . . . . . . . . . . . . 0.3133 'X-RAY DIFFRACTION' 3.30 4.16 . . 138 2390 99.37 . . . . 0.1873 . . . . . . . . . . . . . . . 0.2259 'X-RAY DIFFRACTION' 4.16 24.81 . . 143 2537 99.81 . . . . 0.1810 . . . . . . . . . . . . . . . 0.2181 # _struct.entry_id 9VKN _struct.title 'Crystal structure of DhdR in complex with inducer L2HG' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9VKN _struct_keywords.text 'Transcriptional regulator, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A6N0JVZ6_ACHDE _struct_ref.pdbx_db_accession A0A6N0JVZ6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VSAGLDDREQLASVYELRMELEGGAAALAARRRNATDLVAMAEALAALEANLEHPEQGVEHDIAFHVAIAAATHNRYYQD LLQYLNLQLRLAVSTARTNSRRQEGLTAVVHQEHVAVYDAILAGDPDRARLAATRHLQQAASRLRLDLLS ; _struct_ref.pdbx_align_begin 82 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9VKN A 1 ? 150 ? A0A6N0JVZ6 82 ? 231 ? 82 231 2 1 9VKN B 1 ? 150 ? A0A6N0JVZ6 82 ? 231 ? 82 231 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9VKN ALA A 39 ? UNP A0A6N0JVZ6 VAL 120 conflict 120 1 1 9VKN ASP A 53 ? UNP A0A6N0JVZ6 GLU 134 conflict 134 2 2 9VKN ALA B 39 ? UNP A0A6N0JVZ6 VAL 120 conflict 120 3 2 9VKN ASP B 53 ? UNP A0A6N0JVZ6 GLU 134 conflict 134 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2220 ? 1 MORE -32 ? 1 'SSA (A^2)' 12810 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 7 ? ARG A 33 ? ASP A 88 ARG A 114 1 ? 27 HELX_P HELX_P2 AA2 ASN A 34 ? ALA A 50 ? ASN A 115 ALA A 131 1 ? 17 HELX_P HELX_P3 AA3 GLN A 57 ? ALA A 72 ? GLN A 138 ALA A 153 1 ? 16 HELX_P HELX_P4 AA4 ASN A 75 ? LEU A 85 ? ASN A 156 LEU A 166 1 ? 11 HELX_P HELX_P5 AA5 LEU A 85 ? ARG A 101 ? LEU A 166 ARG A 182 1 ? 17 HELX_P HELX_P6 AA6 GLY A 105 ? ALA A 123 ? GLY A 186 ALA A 204 1 ? 19 HELX_P HELX_P7 AA7 ASP A 125 ? LEU A 144 ? ASP A 206 LEU A 225 1 ? 20 HELX_P HELX_P8 AA8 ASP B 7 ? ARG B 33 ? ASP B 88 ARG B 114 1 ? 27 HELX_P HELX_P9 AA9 ASN B 34 ? ASN B 51 ? ASN B 115 ASN B 132 1 ? 18 HELX_P HELX_P10 AB1 GLN B 57 ? THR B 73 ? GLN B 138 THR B 154 1 ? 17 HELX_P HELX_P11 AB2 ASN B 75 ? LEU B 85 ? ASN B 156 LEU B 166 1 ? 11 HELX_P HELX_P12 AB3 LEU B 85 ? ARG B 102 ? LEU B 166 ARG B 183 1 ? 18 HELX_P HELX_P13 AB4 GLY B 105 ? GLY B 124 ? GLY B 186 GLY B 205 1 ? 20 HELX_P HELX_P14 AB5 ASP B 125 ? LEU B 144 ? ASP B 206 LEU B 225 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 62 OD1 ? ? ? 1_555 D ZN . ZN ? ? A ASP 143 A ZN 302 1_555 ? ? ? ? ? ? ? 2.317 ? ? metalc2 metalc ? ? A HIS 66 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 147 A ZN 302 1_555 ? ? ? ? ? ? ? 2.094 ? ? metalc3 metalc ? ? A HIS 114 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 195 A ZN 302 1_555 ? ? ? ? ? ? ? 2.132 ? ? metalc4 metalc ? ? A HIS 136 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 217 A ZN 302 1_555 ? ? ? ? ? ? ? 1.816 ? ? metalc5 metalc ? ? C S2G . O2 ? ? ? 1_555 D ZN . ZN ? ? A S2G 301 A ZN 302 1_555 ? ? ? ? ? ? ? 2.250 ? ? metalc6 metalc ? ? C S2G . O3 ? ? ? 1_555 D ZN . ZN ? ? A S2G 301 A ZN 302 1_555 ? ? ? ? ? ? ? 2.188 ? ? metalc7 metalc ? ? B ASP 62 OD1 ? ? ? 1_555 G ZN . ZN ? ? B ASP 143 B ZN 302 1_555 ? ? ? ? ? ? ? 2.313 ? ? metalc8 metalc ? ? B HIS 66 NE2 ? ? ? 1_555 G ZN . ZN ? ? B HIS 147 B ZN 302 1_555 ? ? ? ? ? ? ? 2.188 ? ? metalc9 metalc ? ? B HIS 114 NE2 ? ? ? 1_555 G ZN . ZN ? ? B HIS 195 B ZN 302 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc10 metalc ? ? B HIS 136 NE2 ? ? ? 1_555 G ZN . ZN ? ? B HIS 217 B ZN 302 1_555 ? ? ? ? ? ? ? 2.299 ? ? metalc11 metalc ? ? F S2G . O1 ? ? ? 1_555 G ZN . ZN ? ? B S2G 301 B ZN 302 1_555 ? ? ? ? ? ? ? 2.225 ? ? metalc12 metalc ? ? F S2G . O3 ? ? ? 1_555 G ZN . ZN ? ? B S2G 301 B ZN 302 1_555 ? ? ? ? ? ? ? 2.064 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 62 ? A ASP 143 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 NE2 ? A HIS 66 ? A HIS 147 ? 1_555 84.3 ? 2 OD1 ? A ASP 62 ? A ASP 143 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 NE2 ? A HIS 114 ? A HIS 195 ? 1_555 84.6 ? 3 NE2 ? A HIS 66 ? A HIS 147 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 NE2 ? A HIS 114 ? A HIS 195 ? 1_555 92.1 ? 4 OD1 ? A ASP 62 ? A ASP 143 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 NE2 ? A HIS 136 ? A HIS 217 ? 1_555 174.7 ? 5 NE2 ? A HIS 66 ? A HIS 147 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 NE2 ? A HIS 136 ? A HIS 217 ? 1_555 99.1 ? 6 NE2 ? A HIS 114 ? A HIS 195 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 NE2 ? A HIS 136 ? A HIS 217 ? 1_555 99.2 ? 7 OD1 ? A ASP 62 ? A ASP 143 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O2 ? C S2G . ? A S2G 301 ? 1_555 98.7 ? 8 NE2 ? A HIS 66 ? A HIS 147 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O2 ? C S2G . ? A S2G 301 ? 1_555 90.0 ? 9 NE2 ? A HIS 114 ? A HIS 195 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O2 ? C S2G . ? A S2G 301 ? 1_555 176.2 ? 10 NE2 ? A HIS 136 ? A HIS 217 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O2 ? C S2G . ? A S2G 301 ? 1_555 77.4 ? 11 OD1 ? A ASP 62 ? A ASP 143 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O3 ? C S2G . ? A S2G 301 ? 1_555 87.8 ? 12 NE2 ? A HIS 66 ? A HIS 147 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O3 ? C S2G . ? A S2G 301 ? 1_555 160.1 ? 13 NE2 ? A HIS 114 ? A HIS 195 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O3 ? C S2G . ? A S2G 301 ? 1_555 105.2 ? 14 NE2 ? A HIS 136 ? A HIS 217 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O3 ? C S2G . ? A S2G 301 ? 1_555 87.7 ? 15 O2 ? C S2G . ? A S2G 301 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O3 ? C S2G . ? A S2G 301 ? 1_555 73.2 ? 16 OD1 ? B ASP 62 ? B ASP 143 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 NE2 ? B HIS 66 ? B HIS 147 ? 1_555 84.3 ? 17 OD1 ? B ASP 62 ? B ASP 143 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 NE2 ? B HIS 114 ? B HIS 195 ? 1_555 91.4 ? 18 NE2 ? B HIS 66 ? B HIS 147 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 NE2 ? B HIS 114 ? B HIS 195 ? 1_555 102.9 ? 19 OD1 ? B ASP 62 ? B ASP 143 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 NE2 ? B HIS 136 ? B HIS 217 ? 1_555 174.4 ? 20 NE2 ? B HIS 66 ? B HIS 147 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 NE2 ? B HIS 136 ? B HIS 217 ? 1_555 94.9 ? 21 NE2 ? B HIS 114 ? B HIS 195 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 NE2 ? B HIS 136 ? B HIS 217 ? 1_555 83.4 ? 22 OD1 ? B ASP 62 ? B ASP 143 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 O1 ? F S2G . ? B S2G 301 ? 1_555 92.0 ? 23 NE2 ? B HIS 66 ? B HIS 147 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 O1 ? F S2G . ? B S2G 301 ? 1_555 85.3 ? 24 NE2 ? B HIS 114 ? B HIS 195 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 O1 ? F S2G . ? B S2G 301 ? 1_555 171.4 ? 25 NE2 ? B HIS 136 ? B HIS 217 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 O1 ? F S2G . ? B S2G 301 ? 1_555 93.4 ? 26 OD1 ? B ASP 62 ? B ASP 143 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 O3 ? F S2G . ? B S2G 301 ? 1_555 86.9 ? 27 NE2 ? B HIS 66 ? B HIS 147 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 O3 ? F S2G . ? B S2G 301 ? 1_555 160.7 ? 28 NE2 ? B HIS 114 ? B HIS 195 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 O3 ? F S2G . ? B S2G 301 ? 1_555 94.4 ? 29 NE2 ? B HIS 136 ? B HIS 217 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 O3 ? F S2G . ? B S2G 301 ? 1_555 95.4 ? 30 O1 ? F S2G . ? B S2G 301 ? 1_555 ZN ? G ZN . ? B ZN 302 ? 1_555 O3 ? F S2G . ? B S2G 301 ? 1_555 77.9 ? # _pdbx_entry_details.entry_id 9VKN _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 A ARG 216 ? ? O A HOH 401 ? ? 1.93 2 1 OD2 A ASP 161 ? ? OH B TYR 165 ? ? 1.97 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OE1 A GLN 160 ? ? 1_555 OE1 A GLN 160 ? ? 8_555 1.12 2 1 CD A GLN 160 ? ? 1_555 OE1 A GLN 160 ? ? 8_555 2.11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 86 ? ? -140.97 34.50 2 1 ASP A 228 ? ? 58.45 71.12 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z+1/4 3 y+1/2,-x+1/2,z+3/4 4 x+1/2,-y+1/2,-z+3/4 5 -x+1/2,y+1/2,-z+1/4 6 -x,-y,z+1/2 7 y,x,-z 8 -y,-x,-z+1/2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 82 ? A VAL 1 2 1 Y 1 A SER 83 ? A SER 2 3 1 Y 1 A LEU 230 ? A LEU 149 4 1 Y 1 A SER 231 ? A SER 150 5 1 Y 1 B VAL 82 ? B VAL 1 6 1 Y 1 B SER 83 ? B SER 2 7 1 Y 1 B ALA 84 ? B ALA 3 8 1 Y 1 B GLY 85 ? B GLY 4 9 1 Y 1 B LEU 230 ? B LEU 149 10 1 Y 1 B SER 231 ? B SER 150 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 HIS N N N N 124 HIS CA C N S 125 HIS C C N N 126 HIS O O N N 127 HIS CB C N N 128 HIS CG C Y N 129 HIS ND1 N Y N 130 HIS CD2 C Y N 131 HIS CE1 C Y N 132 HIS NE2 N Y N 133 HIS OXT O N N 134 HIS H H N N 135 HIS H2 H N N 136 HIS HA H N N 137 HIS HB2 H N N 138 HIS HB3 H N N 139 HIS HD1 H N N 140 HIS HD2 H N N 141 HIS HE1 H N N 142 HIS HE2 H N N 143 HIS HXT H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 ILE N N N N 148 ILE CA C N S 149 ILE C C N N 150 ILE O O N N 151 ILE CB C N S 152 ILE CG1 C N N 153 ILE CG2 C N N 154 ILE CD1 C N N 155 ILE OXT O N N 156 ILE H H N N 157 ILE H2 H N N 158 ILE HA H N N 159 ILE HB H N N 160 ILE HG12 H N N 161 ILE HG13 H N N 162 ILE HG21 H N N 163 ILE HG22 H N N 164 ILE HG23 H N N 165 ILE HD11 H N N 166 ILE HD12 H N N 167 ILE HD13 H N N 168 ILE HXT H N N 169 LEU N N N N 170 LEU CA C N S 171 LEU C C N N 172 LEU O O N N 173 LEU CB C N N 174 LEU CG C N N 175 LEU CD1 C N N 176 LEU CD2 C N N 177 LEU OXT O N N 178 LEU H H N N 179 LEU H2 H N N 180 LEU HA H N N 181 LEU HB2 H N N 182 LEU HB3 H N N 183 LEU HG H N N 184 LEU HD11 H N N 185 LEU HD12 H N N 186 LEU HD13 H N N 187 LEU HD21 H N N 188 LEU HD22 H N N 189 LEU HD23 H N N 190 LEU HXT H N N 191 MET N N N N 192 MET CA C N S 193 MET C C N N 194 MET O O N N 195 MET CB C N N 196 MET CG C N N 197 MET SD S N N 198 MET CE C N N 199 MET OXT O N N 200 MET H H N N 201 MET H2 H N N 202 MET HA H N N 203 MET HB2 H N N 204 MET HB3 H N N 205 MET HG2 H N N 206 MET HG3 H N N 207 MET HE1 H N N 208 MET HE2 H N N 209 MET HE3 H N N 210 MET HXT H N N 211 PHE N N N N 212 PHE CA C N S 213 PHE C C N N 214 PHE O O N N 215 PHE CB C N N 216 PHE CG C Y N 217 PHE CD1 C Y N 218 PHE CD2 C Y N 219 PHE CE1 C Y N 220 PHE CE2 C Y N 221 PHE CZ C Y N 222 PHE OXT O N N 223 PHE H H N N 224 PHE H2 H N N 225 PHE HA H N N 226 PHE HB2 H N N 227 PHE HB3 H N N 228 PHE HD1 H N N 229 PHE HD2 H N N 230 PHE HE1 H N N 231 PHE HE2 H N N 232 PHE HZ H N N 233 PHE HXT H N N 234 PRO N N N N 235 PRO CA C N S 236 PRO C C N N 237 PRO O O N N 238 PRO CB C N N 239 PRO CG C N N 240 PRO CD C N N 241 PRO OXT O N N 242 PRO H H N N 243 PRO HA H N N 244 PRO HB2 H N N 245 PRO HB3 H N N 246 PRO HG2 H N N 247 PRO HG3 H N N 248 PRO HD2 H N N 249 PRO HD3 H N N 250 PRO HXT H N N 251 S2G C1 C N N 252 S2G C3 C N N 253 S2G C4 C N N 254 S2G C5 C N N 255 S2G O2 O N N 256 S2G O1 O N N 257 S2G O3 O N N 258 S2G O5 O N N 259 S2G C2 C N S 260 S2G O4 O N N 261 S2G H2 H N N 262 S2G H3 H N N 263 S2G H3A H N N 264 S2G H4 H N N 265 S2G H4A H N N 266 S2G H5 H N N 267 S2G HO3 H N N 268 S2G HO2 H N N 269 SER N N N N 270 SER CA C N S 271 SER C C N N 272 SER O O N N 273 SER CB C N N 274 SER OG O N N 275 SER OXT O N N 276 SER H H N N 277 SER H2 H N N 278 SER HA H N N 279 SER HB2 H N N 280 SER HB3 H N N 281 SER HG H N N 282 SER HXT H N N 283 THR N N N N 284 THR CA C N S 285 THR C C N N 286 THR O O N N 287 THR CB C N R 288 THR OG1 O N N 289 THR CG2 C N N 290 THR OXT O N N 291 THR H H N N 292 THR H2 H N N 293 THR HA H N N 294 THR HB H N N 295 THR HG1 H N N 296 THR HG21 H N N 297 THR HG22 H N N 298 THR HG23 H N N 299 THR HXT H N N 300 TYR N N N N 301 TYR CA C N S 302 TYR C C N N 303 TYR O O N N 304 TYR CB C N N 305 TYR CG C Y N 306 TYR CD1 C Y N 307 TYR CD2 C Y N 308 TYR CE1 C Y N 309 TYR CE2 C Y N 310 TYR CZ C Y N 311 TYR OH O N N 312 TYR OXT O N N 313 TYR H H N N 314 TYR H2 H N N 315 TYR HA H N N 316 TYR HB2 H N N 317 TYR HB3 H N N 318 TYR HD1 H N N 319 TYR HD2 H N N 320 TYR HE1 H N N 321 TYR HE2 H N N 322 TYR HH H N N 323 TYR HXT H N N 324 VAL N N N N 325 VAL CA C N S 326 VAL C C N N 327 VAL O O N N 328 VAL CB C N N 329 VAL CG1 C N N 330 VAL CG2 C N N 331 VAL OXT O N N 332 VAL H H N N 333 VAL H2 H N N 334 VAL HA H N N 335 VAL HB H N N 336 VAL HG11 H N N 337 VAL HG12 H N N 338 VAL HG13 H N N 339 VAL HG21 H N N 340 VAL HG22 H N N 341 VAL HG23 H N N 342 VAL HXT H N N 343 ZN ZN ZN N N 344 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 MET N CA sing N N 181 MET N H sing N N 182 MET N H2 sing N N 183 MET CA C sing N N 184 MET CA CB sing N N 185 MET CA HA sing N N 186 MET C O doub N N 187 MET C OXT sing N N 188 MET CB CG sing N N 189 MET CB HB2 sing N N 190 MET CB HB3 sing N N 191 MET CG SD sing N N 192 MET CG HG2 sing N N 193 MET CG HG3 sing N N 194 MET SD CE sing N N 195 MET CE HE1 sing N N 196 MET CE HE2 sing N N 197 MET CE HE3 sing N N 198 MET OXT HXT sing N N 199 PHE N CA sing N N 200 PHE N H sing N N 201 PHE N H2 sing N N 202 PHE CA C sing N N 203 PHE CA CB sing N N 204 PHE CA HA sing N N 205 PHE C O doub N N 206 PHE C OXT sing N N 207 PHE CB CG sing N N 208 PHE CB HB2 sing N N 209 PHE CB HB3 sing N N 210 PHE CG CD1 doub Y N 211 PHE CG CD2 sing Y N 212 PHE CD1 CE1 sing Y N 213 PHE CD1 HD1 sing N N 214 PHE CD2 CE2 doub Y N 215 PHE CD2 HD2 sing N N 216 PHE CE1 CZ doub Y N 217 PHE CE1 HE1 sing N N 218 PHE CE2 CZ sing Y N 219 PHE CE2 HE2 sing N N 220 PHE CZ HZ sing N N 221 PHE OXT HXT sing N N 222 PRO N CA sing N N 223 PRO N CD sing N N 224 PRO N H sing N N 225 PRO CA C sing N N 226 PRO CA CB sing N N 227 PRO CA HA sing N N 228 PRO C O doub N N 229 PRO C OXT sing N N 230 PRO CB CG sing N N 231 PRO CB HB2 sing N N 232 PRO CB HB3 sing N N 233 PRO CG CD sing N N 234 PRO CG HG2 sing N N 235 PRO CG HG3 sing N N 236 PRO CD HD2 sing N N 237 PRO CD HD3 sing N N 238 PRO OXT HXT sing N N 239 S2G C1 O2 sing N N 240 S2G C1 O1 doub N N 241 S2G C1 C2 sing N N 242 S2G C3 C4 sing N N 243 S2G C3 C2 sing N N 244 S2G C4 C5 sing N N 245 S2G C5 O5 sing N N 246 S2G C5 O4 doub N N 247 S2G O3 C2 sing N N 248 S2G C2 H2 sing N N 249 S2G C3 H3 sing N N 250 S2G C3 H3A sing N N 251 S2G C4 H4 sing N N 252 S2G C4 H4A sing N N 253 S2G O5 H5 sing N N 254 S2G O3 HO3 sing N N 255 S2G O2 HO2 sing N N 256 SER N CA sing N N 257 SER N H sing N N 258 SER N H2 sing N N 259 SER CA C sing N N 260 SER CA CB sing N N 261 SER CA HA sing N N 262 SER C O doub N N 263 SER C OXT sing N N 264 SER CB OG sing N N 265 SER CB HB2 sing N N 266 SER CB HB3 sing N N 267 SER OG HG sing N N 268 SER OXT HXT sing N N 269 THR N CA sing N N 270 THR N H sing N N 271 THR N H2 sing N N 272 THR CA C sing N N 273 THR CA CB sing N N 274 THR CA HA sing N N 275 THR C O doub N N 276 THR C OXT sing N N 277 THR CB OG1 sing N N 278 THR CB CG2 sing N N 279 THR CB HB sing N N 280 THR OG1 HG1 sing N N 281 THR CG2 HG21 sing N N 282 THR CG2 HG22 sing N N 283 THR CG2 HG23 sing N N 284 THR OXT HXT sing N N 285 TYR N CA sing N N 286 TYR N H sing N N 287 TYR N H2 sing N N 288 TYR CA C sing N N 289 TYR CA CB sing N N 290 TYR CA HA sing N N 291 TYR C O doub N N 292 TYR C OXT sing N N 293 TYR CB CG sing N N 294 TYR CB HB2 sing N N 295 TYR CB HB3 sing N N 296 TYR CG CD1 doub Y N 297 TYR CG CD2 sing Y N 298 TYR CD1 CE1 sing Y N 299 TYR CD1 HD1 sing N N 300 TYR CD2 CE2 doub Y N 301 TYR CD2 HD2 sing N N 302 TYR CE1 CZ doub Y N 303 TYR CE1 HE1 sing N N 304 TYR CE2 CZ sing Y N 305 TYR CE2 HE2 sing N N 306 TYR CZ OH sing N N 307 TYR OH HH sing N N 308 TYR OXT HXT sing N N 309 VAL N CA sing N N 310 VAL N H sing N N 311 VAL N H2 sing N N 312 VAL CA C sing N N 313 VAL CA CB sing N N 314 VAL CA HA sing N N 315 VAL C O doub N N 316 VAL C OXT sing N N 317 VAL CB CG1 sing N N 318 VAL CB CG2 sing N N 319 VAL CB HB sing N N 320 VAL CG1 HG11 sing N N 321 VAL CG1 HG12 sing N N 322 VAL CG1 HG13 sing N N 323 VAL CG2 HG21 sing N N 324 VAL CG2 HG22 sing N N 325 VAL CG2 HG23 sing N N 326 VAL OXT HXT sing N N 327 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 41 21 2' _space_group.name_Hall 'P 4abw 2nw' _space_group.IT_number 92 _space_group.crystal_system tetragonal _space_group.id 1 # _atom_sites.entry_id 9VKN _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.007875 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007875 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025141 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CL ? ? 9.50761 7.44341 ? ? 1.04373 23.83732 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? ZN ? ? 24.64596 5.25405 ? ? 2.14387 29.76375 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ #