data_9VQI # _entry.id 9VQI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9VQI pdb_00009vqi 10.2210/pdb9vqi/pdb WWPDB D_1300061199 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-10-07 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9VQI _pdbx_database_status.recvd_initial_deposition_date 2025-07-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email weimanxing@shnu.edu.cn _pdbx_contact_author.name_first Weiman _pdbx_contact_author.name_last Xing _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-6238-0075 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhao, X.Y.' 1 0009-0007-1052-5889 'Xin, J.' 2 0000-0002-1702-3773 'Xing, W.M.' 3 0000-0002-6238-0075 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of E1 bound to DNA fragment' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhao, X.Y.' 1 0009-0007-1052-5889 primary 'Xin, J.' 2 0000-0002-1702-3773 primary 'Xing, W.M.' 3 0000-0002-6238-0075 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*AP*GP*AP*GP*AP*GP*AP*AP*AP*AP*TP*GP*AP*GP*AP*AP*GP*AP*TP*G)-3') ; 6313.145 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*CP*AP*TP*CP*TP*TP*CP*TP*CP*AP*TP*TP*TP*TP*CP*TP*CP*TP*CP*T)-3') ; 5951.849 1 ? ? ? ? 3 polymer man 'E1-fs protein' 14173.785 2 ? ? ? ? 4 non-polymer nat D-MALATE 134.087 2 ? ? ? ? 5 water nat water 18.015 37 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DG)(DA)(DG)(DA)(DG)(DA)(DA)(DA)(DA)(DT)(DG)(DA)(DG)(DA)(DA)(DG)(DA)(DT)(DG)' AGAGAGAAAATGAGAAGATG C ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DT)(DC)(DT)(DT)(DC)(DT)(DC)(DA)(DT)(DT)(DT)(DT)(DC)(DT)(DC)(DT)(DC)(DT)' CATCTTCTCATTTTCTCTCT D ? 3 'polypeptide(L)' no yes ;DDPWKIKKTLTDSDLGILSRLLLAADLVKKQILP(MSE)LGAYHARAAETEGTPVRVWD(MSE)DTKS(MSE)HQLVLKR WSSSKSYVLIGKWNQDFVRRRDLRKGDEIGFHWDPYNCVFNFCVLKQA(MSE)PEN ; ;DDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGAYHARAAETEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIGK WNQDFVRRRDLRKGDEIGFHWDPYNCVFNFCVLKQAMPEN ; A,B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 D-MALATE MLT 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DG n 1 3 DA n 1 4 DG n 1 5 DA n 1 6 DG n 1 7 DA n 1 8 DA n 1 9 DA n 1 10 DA n 1 11 DT n 1 12 DG n 1 13 DA n 1 14 DG n 1 15 DA n 1 16 DA n 1 17 DG n 1 18 DA n 1 19 DT n 1 20 DG n 2 1 DC n 2 2 DA n 2 3 DT n 2 4 DC n 2 5 DT n 2 6 DT n 2 7 DC n 2 8 DT n 2 9 DC n 2 10 DA n 2 11 DT n 2 12 DT n 2 13 DT n 2 14 DT n 2 15 DC n 2 16 DT n 2 17 DC n 2 18 DT n 2 19 DC n 2 20 DT n 3 1 ASP n 3 2 ASP n 3 3 PRO n 3 4 TRP n 3 5 LYS n 3 6 ILE n 3 7 LYS n 3 8 LYS n 3 9 THR n 3 10 LEU n 3 11 THR n 3 12 ASP n 3 13 SER n 3 14 ASP n 3 15 LEU n 3 16 GLY n 3 17 ILE n 3 18 LEU n 3 19 SER n 3 20 ARG n 3 21 LEU n 3 22 LEU n 3 23 LEU n 3 24 ALA n 3 25 ALA n 3 26 ASP n 3 27 LEU n 3 28 VAL n 3 29 LYS n 3 30 LYS n 3 31 GLN n 3 32 ILE n 3 33 LEU n 3 34 PRO n 3 35 MSE n 3 36 LEU n 3 37 GLY n 3 38 ALA n 3 39 TYR n 3 40 HIS n 3 41 ALA n 3 42 ARG n 3 43 ALA n 3 44 ALA n 3 45 GLU n 3 46 THR n 3 47 GLU n 3 48 GLY n 3 49 THR n 3 50 PRO n 3 51 VAL n 3 52 ARG n 3 53 VAL n 3 54 TRP n 3 55 ASP n 3 56 MSE n 3 57 ASP n 3 58 THR n 3 59 LYS n 3 60 SER n 3 61 MSE n 3 62 HIS n 3 63 GLN n 3 64 LEU n 3 65 VAL n 3 66 LEU n 3 67 LYS n 3 68 ARG n 3 69 TRP n 3 70 SER n 3 71 SER n 3 72 SER n 3 73 LYS n 3 74 SER n 3 75 TYR n 3 76 VAL n 3 77 LEU n 3 78 ILE n 3 79 GLY n 3 80 LYS n 3 81 TRP n 3 82 ASN n 3 83 GLN n 3 84 ASP n 3 85 PHE n 3 86 VAL n 3 87 ARG n 3 88 ARG n 3 89 ARG n 3 90 ASP n 3 91 LEU n 3 92 ARG n 3 93 LYS n 3 94 GLY n 3 95 ASP n 3 96 GLU n 3 97 ILE n 3 98 GLY n 3 99 PHE n 3 100 HIS n 3 101 TRP n 3 102 ASP n 3 103 PRO n 3 104 TYR n 3 105 ASN n 3 106 CYS n 3 107 VAL n 3 108 PHE n 3 109 ASN n 3 110 PHE n 3 111 CYS n 3 112 VAL n 3 113 LEU n 3 114 LYS n 3 115 GLN n 3 116 ALA n 3 117 MSE n 3 118 PRO n 3 119 GLU n 3 120 ASN n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 120 _entity_src_gen.gene_src_common_name soybean _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene e1-fs _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Glycine max' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3847 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 20 'Glycine max' ? 3847 ? 2 1 sample 1 20 'Glycine max' ? 3847 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MLT non-polymer . D-MALATE '(2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID' 'C4 H6 O5' 134.087 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA C . n A 1 2 DG 2 2 2 DG DG C . n A 1 3 DA 3 3 3 DA DA C . n A 1 4 DG 4 4 4 DG DG C . n A 1 5 DA 5 5 5 DA DA C . n A 1 6 DG 6 6 6 DG DG C . n A 1 7 DA 7 7 7 DA DA C . n A 1 8 DA 8 8 8 DA DA C . n A 1 9 DA 9 9 9 DA DA C . n A 1 10 DA 10 10 10 DA DA C . n A 1 11 DT 11 11 11 DT DT C . n A 1 12 DG 12 12 12 DG DG C . n A 1 13 DA 13 13 13 DA DA C . n A 1 14 DG 14 14 14 DG DG C . n A 1 15 DA 15 15 15 DA DA C . n A 1 16 DA 16 16 16 DA DA C . n A 1 17 DG 17 17 17 DG DG C . n A 1 18 DA 18 18 18 DA DA C . n A 1 19 DT 19 19 19 DT DT C . n A 1 20 DG 20 20 20 DG DG C . n B 2 1 DC 1 1 1 DC DC D . n B 2 2 DA 2 2 2 DA DA D . n B 2 3 DT 3 3 3 DT DT D . n B 2 4 DC 4 4 4 DC DC D . n B 2 5 DT 5 5 5 DT DT D . n B 2 6 DT 6 6 6 DT DT D . n B 2 7 DC 7 7 7 DC DC D . n B 2 8 DT 8 8 8 DT DT D . n B 2 9 DC 9 9 9 DC DC D . n B 2 10 DA 10 10 10 DA DA D . n B 2 11 DT 11 11 11 DT DT D . n B 2 12 DT 12 12 12 DT DT D . n B 2 13 DT 13 13 13 DT DT D . n B 2 14 DT 14 14 14 DT DT D . n B 2 15 DC 15 15 15 DC DC D . n B 2 16 DT 16 16 16 DT DT D . n B 2 17 DC 17 17 17 DC DC D . n B 2 18 DT 18 18 18 DT DT D . n B 2 19 DC 19 19 19 DC DC D . n B 2 20 DT 20 20 20 DT DT D . n C 3 1 ASP 1 55 55 ASP ASP A . n C 3 2 ASP 2 56 56 ASP ASP A . n C 3 3 PRO 3 57 57 PRO PRO A . n C 3 4 TRP 4 58 58 TRP TRP A . n C 3 5 LYS 5 59 59 LYS LYS A . n C 3 6 ILE 6 60 60 ILE ILE A . n C 3 7 LYS 7 61 61 LYS LYS A . n C 3 8 LYS 8 62 62 LYS LYS A . n C 3 9 THR 9 63 63 THR THR A . n C 3 10 LEU 10 64 64 LEU LEU A . n C 3 11 THR 11 65 65 THR THR A . n C 3 12 ASP 12 66 66 ASP ASP A . n C 3 13 SER 13 67 67 SER SER A . n C 3 14 ASP 14 68 68 ASP ASP A . n C 3 15 LEU 15 69 69 LEU LEU A . n C 3 16 GLY 16 70 70 GLY GLY A . n C 3 17 ILE 17 71 71 ILE ILE A . n C 3 18 LEU 18 72 72 LEU LEU A . n C 3 19 SER 19 73 73 SER SER A . n C 3 20 ARG 20 74 74 ARG ARG A . n C 3 21 LEU 21 75 75 LEU LEU A . n C 3 22 LEU 22 76 76 LEU LEU A . n C 3 23 LEU 23 77 77 LEU LEU A . n C 3 24 ALA 24 78 78 ALA ALA A . n C 3 25 ALA 25 79 79 ALA ALA A . n C 3 26 ASP 26 80 80 ASP ASP A . n C 3 27 LEU 27 81 81 LEU LEU A . n C 3 28 VAL 28 82 82 VAL VAL A . n C 3 29 LYS 29 83 83 LYS LYS A . n C 3 30 LYS 30 84 84 LYS LYS A . n C 3 31 GLN 31 85 85 GLN GLN A . n C 3 32 ILE 32 86 86 ILE ILE A . n C 3 33 LEU 33 87 87 LEU LEU A . n C 3 34 PRO 34 88 88 PRO PRO A . n C 3 35 MSE 35 89 89 MSE MSE A . n C 3 36 LEU 36 90 90 LEU LEU A . n C 3 37 GLY 37 91 91 GLY GLY A . n C 3 38 ALA 38 92 92 ALA ALA A . n C 3 39 TYR 39 93 93 TYR TYR A . n C 3 40 HIS 40 94 94 HIS HIS A . n C 3 41 ALA 41 95 95 ALA ALA A . n C 3 42 ARG 42 96 96 ARG ARG A . n C 3 43 ALA 43 97 97 ALA ALA A . n C 3 44 ALA 44 98 98 ALA ALA A . n C 3 45 GLU 45 99 99 GLU GLU A . n C 3 46 THR 46 100 100 THR THR A . n C 3 47 GLU 47 101 101 GLU GLU A . n C 3 48 GLY 48 102 102 GLY GLY A . n C 3 49 THR 49 103 103 THR THR A . n C 3 50 PRO 50 104 104 PRO PRO A . n C 3 51 VAL 51 105 105 VAL VAL A . n C 3 52 ARG 52 106 106 ARG ARG A . n C 3 53 VAL 53 107 107 VAL VAL A . n C 3 54 TRP 54 108 108 TRP TRP A . n C 3 55 ASP 55 109 109 ASP ASP A . n C 3 56 MSE 56 110 110 MSE MSE A . n C 3 57 ASP 57 111 111 ASP ASP A . n C 3 58 THR 58 112 112 THR THR A . n C 3 59 LYS 59 113 113 LYS LYS A . n C 3 60 SER 60 114 114 SER SER A . n C 3 61 MSE 61 115 115 MSE MSE A . n C 3 62 HIS 62 116 116 HIS HIS A . n C 3 63 GLN 63 117 117 GLN GLN A . n C 3 64 LEU 64 118 118 LEU LEU A . n C 3 65 VAL 65 119 119 VAL VAL A . n C 3 66 LEU 66 120 120 LEU LEU A . n C 3 67 LYS 67 121 121 LYS LYS A . n C 3 68 ARG 68 122 122 ARG ARG A . n C 3 69 TRP 69 123 123 TRP TRP A . n C 3 70 SER 70 124 124 SER SER A . n C 3 71 SER 71 125 125 SER SER A . n C 3 72 SER 72 126 126 SER SER A . n C 3 73 LYS 73 127 127 LYS LYS A . n C 3 74 SER 74 128 128 SER SER A . n C 3 75 TYR 75 129 129 TYR TYR A . n C 3 76 VAL 76 130 130 VAL VAL A . n C 3 77 LEU 77 131 131 LEU LEU A . n C 3 78 ILE 78 132 132 ILE ILE A . n C 3 79 GLY 79 133 133 GLY GLY A . n C 3 80 LYS 80 134 134 LYS LYS A . n C 3 81 TRP 81 135 135 TRP TRP A . n C 3 82 ASN 82 136 136 ASN ASN A . n C 3 83 GLN 83 137 137 GLN GLN A . n C 3 84 ASP 84 138 138 ASP ASP A . n C 3 85 PHE 85 139 139 PHE PHE A . n C 3 86 VAL 86 140 140 VAL VAL A . n C 3 87 ARG 87 141 141 ARG ARG A . n C 3 88 ARG 88 142 142 ARG ARG A . n C 3 89 ARG 89 143 143 ARG ARG A . n C 3 90 ASP 90 144 144 ASP ASP A . n C 3 91 LEU 91 145 145 LEU LEU A . n C 3 92 ARG 92 146 146 ARG ARG A . n C 3 93 LYS 93 147 147 LYS LYS A . n C 3 94 GLY 94 148 148 GLY GLY A . n C 3 95 ASP 95 149 149 ASP ASP A . n C 3 96 GLU 96 150 150 GLU GLU A . n C 3 97 ILE 97 151 151 ILE ILE A . n C 3 98 GLY 98 152 152 GLY GLY A . n C 3 99 PHE 99 153 153 PHE PHE A . n C 3 100 HIS 100 154 154 HIS HIS A . n C 3 101 TRP 101 155 155 TRP TRP A . n C 3 102 ASP 102 156 156 ASP ASP A . n C 3 103 PRO 103 157 157 PRO PRO A . n C 3 104 TYR 104 158 158 TYR TYR A . n C 3 105 ASN 105 159 159 ASN ASN A . n C 3 106 CYS 106 160 160 CYS CYS A . n C 3 107 VAL 107 161 161 VAL VAL A . n C 3 108 PHE 108 162 162 PHE PHE A . n C 3 109 ASN 109 163 163 ASN ASN A . n C 3 110 PHE 110 164 164 PHE PHE A . n C 3 111 CYS 111 165 165 CYS CYS A . n C 3 112 VAL 112 166 166 VAL VAL A . n C 3 113 LEU 113 167 167 LEU LEU A . n C 3 114 LYS 114 168 168 LYS LYS A . n C 3 115 GLN 115 169 169 GLN GLN A . n C 3 116 ALA 116 170 170 ALA ALA A . n C 3 117 MSE 117 171 171 MSE MSE A . n C 3 118 PRO 118 172 172 PRO PRO A . n C 3 119 GLU 119 173 173 GLU GLU A . n C 3 120 ASN 120 174 174 ASN ASN A . n D 3 1 ASP 1 55 55 ASP ASP B . n D 3 2 ASP 2 56 56 ASP ASP B . n D 3 3 PRO 3 57 57 PRO PRO B . n D 3 4 TRP 4 58 58 TRP TRP B . n D 3 5 LYS 5 59 59 LYS LYS B . n D 3 6 ILE 6 60 60 ILE ILE B . n D 3 7 LYS 7 61 61 LYS LYS B . n D 3 8 LYS 8 62 62 LYS LYS B . n D 3 9 THR 9 63 63 THR THR B . n D 3 10 LEU 10 64 64 LEU LEU B . n D 3 11 THR 11 65 65 THR THR B . n D 3 12 ASP 12 66 66 ASP ASP B . n D 3 13 SER 13 67 67 SER SER B . n D 3 14 ASP 14 68 68 ASP ASP B . n D 3 15 LEU 15 69 69 LEU LEU B . n D 3 16 GLY 16 70 70 GLY GLY B . n D 3 17 ILE 17 71 71 ILE ILE B . n D 3 18 LEU 18 72 72 LEU LEU B . n D 3 19 SER 19 73 73 SER SER B . n D 3 20 ARG 20 74 74 ARG ARG B . n D 3 21 LEU 21 75 75 LEU LEU B . n D 3 22 LEU 22 76 76 LEU LEU B . n D 3 23 LEU 23 77 77 LEU LEU B . n D 3 24 ALA 24 78 78 ALA ALA B . n D 3 25 ALA 25 79 79 ALA ALA B . n D 3 26 ASP 26 80 80 ASP ASP B . n D 3 27 LEU 27 81 81 LEU LEU B . n D 3 28 VAL 28 82 82 VAL VAL B . n D 3 29 LYS 29 83 83 LYS LYS B . n D 3 30 LYS 30 84 84 LYS LYS B . n D 3 31 GLN 31 85 85 GLN GLN B . n D 3 32 ILE 32 86 86 ILE ILE B . n D 3 33 LEU 33 87 87 LEU LEU B . n D 3 34 PRO 34 88 88 PRO PRO B . n D 3 35 MSE 35 89 89 MSE MSE B . n D 3 36 LEU 36 90 90 LEU LEU B . n D 3 37 GLY 37 91 91 GLY GLY B . n D 3 38 ALA 38 92 92 ALA ALA B . n D 3 39 TYR 39 93 93 TYR TYR B . n D 3 40 HIS 40 94 94 HIS HIS B . n D 3 41 ALA 41 95 95 ALA ALA B . n D 3 42 ARG 42 96 96 ARG ARG B . n D 3 43 ALA 43 97 97 ALA ALA B . n D 3 44 ALA 44 98 98 ALA ALA B . n D 3 45 GLU 45 99 99 GLU GLU B . n D 3 46 THR 46 100 100 THR THR B . n D 3 47 GLU 47 101 101 GLU GLU B . n D 3 48 GLY 48 102 102 GLY GLY B . n D 3 49 THR 49 103 103 THR THR B . n D 3 50 PRO 50 104 104 PRO PRO B . n D 3 51 VAL 51 105 105 VAL VAL B . n D 3 52 ARG 52 106 106 ARG ARG B . n D 3 53 VAL 53 107 107 VAL VAL B . n D 3 54 TRP 54 108 108 TRP TRP B . n D 3 55 ASP 55 109 109 ASP ASP B . n D 3 56 MSE 56 110 110 MSE MSE B . n D 3 57 ASP 57 111 111 ASP ASP B . n D 3 58 THR 58 112 112 THR THR B . n D 3 59 LYS 59 113 113 LYS LYS B . n D 3 60 SER 60 114 114 SER SER B . n D 3 61 MSE 61 115 115 MSE MSE B . n D 3 62 HIS 62 116 116 HIS HIS B . n D 3 63 GLN 63 117 117 GLN GLN B . n D 3 64 LEU 64 118 118 LEU LEU B . n D 3 65 VAL 65 119 119 VAL VAL B . n D 3 66 LEU 66 120 120 LEU LEU B . n D 3 67 LYS 67 121 121 LYS LYS B . n D 3 68 ARG 68 122 122 ARG ARG B . n D 3 69 TRP 69 123 123 TRP TRP B . n D 3 70 SER 70 124 124 SER SER B . n D 3 71 SER 71 125 125 SER SER B . n D 3 72 SER 72 126 126 SER SER B . n D 3 73 LYS 73 127 127 LYS LYS B . n D 3 74 SER 74 128 128 SER SER B . n D 3 75 TYR 75 129 129 TYR TYR B . n D 3 76 VAL 76 130 130 VAL VAL B . n D 3 77 LEU 77 131 131 LEU LEU B . n D 3 78 ILE 78 132 132 ILE ILE B . n D 3 79 GLY 79 133 133 GLY GLY B . n D 3 80 LYS 80 134 134 LYS LYS B . n D 3 81 TRP 81 135 135 TRP TRP B . n D 3 82 ASN 82 136 136 ASN ASN B . n D 3 83 GLN 83 137 137 GLN GLN B . n D 3 84 ASP 84 138 138 ASP ASP B . n D 3 85 PHE 85 139 139 PHE PHE B . n D 3 86 VAL 86 140 140 VAL VAL B . n D 3 87 ARG 87 141 141 ARG ARG B . n D 3 88 ARG 88 142 142 ARG ARG B . n D 3 89 ARG 89 143 143 ARG ARG B . n D 3 90 ASP 90 144 144 ASP ASP B . n D 3 91 LEU 91 145 145 LEU LEU B . n D 3 92 ARG 92 146 146 ARG ARG B . n D 3 93 LYS 93 147 147 LYS LYS B . n D 3 94 GLY 94 148 148 GLY GLY B . n D 3 95 ASP 95 149 149 ASP ASP B . n D 3 96 GLU 96 150 150 GLU GLU B . n D 3 97 ILE 97 151 151 ILE ILE B . n D 3 98 GLY 98 152 152 GLY GLY B . n D 3 99 PHE 99 153 153 PHE PHE B . n D 3 100 HIS 100 154 154 HIS HIS B . n D 3 101 TRP 101 155 155 TRP TRP B . n D 3 102 ASP 102 156 156 ASP ASP B . n D 3 103 PRO 103 157 157 PRO PRO B . n D 3 104 TYR 104 158 158 TYR TYR B . n D 3 105 ASN 105 159 159 ASN ASN B . n D 3 106 CYS 106 160 160 CYS CYS B . n D 3 107 VAL 107 161 161 VAL VAL B . n D 3 108 PHE 108 162 162 PHE PHE B . n D 3 109 ASN 109 163 163 ASN ASN B . n D 3 110 PHE 110 164 164 PHE PHE B . n D 3 111 CYS 111 165 165 CYS CYS B . n D 3 112 VAL 112 166 166 VAL VAL B . n D 3 113 LEU 113 167 167 LEU LEU B . n D 3 114 LYS 114 168 168 LYS LYS B . n D 3 115 GLN 115 169 169 GLN GLN B . n D 3 116 ALA 116 170 170 ALA ALA B . n D 3 117 MSE 117 171 171 MSE MSE B . n D 3 118 PRO 118 172 172 PRO PRO B . n D 3 119 GLU 119 173 173 GLU GLU B . n D 3 120 ASN 120 174 174 ASN ASN B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id MLT _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id MLT _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 MLT 1 501 501 MLT MLT A . F 4 MLT 1 201 502 MLT MLT B . G 5 HOH 1 101 107 HOH HOH C . G 5 HOH 2 102 126 HOH HOH C . G 5 HOH 3 103 30 HOH HOH C . G 5 HOH 4 104 15 HOH HOH C . G 5 HOH 5 105 127 HOH HOH C . H 5 HOH 1 101 23 HOH HOH D . H 5 HOH 2 102 129 HOH HOH D . H 5 HOH 3 103 21 HOH HOH D . H 5 HOH 4 104 11 HOH HOH D . H 5 HOH 5 105 16 HOH HOH D . H 5 HOH 6 106 18 HOH HOH D . H 5 HOH 7 107 114 HOH HOH D . I 5 HOH 1 601 113 HOH HOH A . I 5 HOH 2 602 4 HOH HOH A . I 5 HOH 3 603 8 HOH HOH A . I 5 HOH 4 604 13 HOH HOH A . I 5 HOH 5 605 112 HOH HOH A . I 5 HOH 6 606 9 HOH HOH A . I 5 HOH 7 607 10 HOH HOH A . I 5 HOH 8 608 12 HOH HOH A . I 5 HOH 9 609 25 HOH HOH A . I 5 HOH 10 610 125 HOH HOH A . J 5 HOH 1 301 135 HOH HOH B . J 5 HOH 2 302 122 HOH HOH B . J 5 HOH 3 303 7 HOH HOH B . J 5 HOH 4 304 5 HOH HOH B . J 5 HOH 5 305 128 HOH HOH B . J 5 HOH 6 306 26 HOH HOH B . J 5 HOH 7 307 17 HOH HOH B . J 5 HOH 8 308 108 HOH HOH B . J 5 HOH 9 309 111 HOH HOH B . J 5 HOH 10 310 24 HOH HOH B . J 5 HOH 11 311 2 HOH HOH B . J 5 HOH 12 312 118 HOH HOH B . J 5 HOH 13 313 119 HOH HOH B . J 5 HOH 14 314 132 HOH HOH B . J 5 HOH 15 315 115 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 ? 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 ? 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . ? 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . ? 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . ? 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 9VQI _cell.details ? _cell.formula_units_Z ? _cell.length_a 88.958 _cell.length_a_esd ? _cell.length_b 88.958 _cell.length_b_esd ? _cell.length_c 127.127 _cell.length_c_esd ? _cell.volume 871241.293 _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9VQI _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall 'P 6c' _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9VQI _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.61 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50% PEG3350, 3M DL-Malic-acid' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 277.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-06-09 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 42.99 _reflns.entry_id 9VQI _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.80 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14289 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.052 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.85 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1004 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 11.8 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.881 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.743 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 44.12 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9VQI _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.803 _refine.ls_d_res_low 31.782 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13996 _refine.ls_number_reflns_R_free 2630 _refine.ls_number_reflns_R_work 24021 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.54 _refine.ls_percent_reflns_R_free 9.87 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2117 _refine.ls_R_factor_R_free 0.2476 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2078 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 25.1581 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3756 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.803 _refine_hist.d_res_low 31.782 _refine_hist.number_atoms_solvent 37 _refine_hist.number_atoms_total 2839 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1964 _refine_hist.pdbx_number_atoms_nucleic_acid 820 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # _refine_ls_shell.R_factor_R_free 0.3406 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3273 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.correlation_coeff_Fo_to_Fc ? _refine_ls_shell.correlation_coeff_Fo_to_Fc_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work ? _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.90 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1956 _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.percent_reflns_obs 79 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? # _struct.entry_id 9VQI _struct.title 'Structure of E1 bound to DNA fragment' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9VQI _struct_keywords.text 'Soybean, E1, PLANT PROTEIN/DNA, PLANT PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'PLANT PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9VQI 9VQI ? 1 ? 1 2 PDB 9VQI 9VQI ? 2 ? 1 3 UNP I2FKG9_SOYBN I2FKG9 ? 3 ;DDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGAYHARAAETEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIGK WNQDFVRRRDLRKGDEIGFHWDPYNCVFNFCVLKQAMPEN ; 14 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9VQI C 1 ? 20 ? 9VQI 1 ? 20 ? 1 20 2 2 9VQI D 1 ? 20 ? 9VQI 1 ? 20 ? 1 20 3 3 9VQI A 1 ? 120 ? I2FKG9 14 ? 133 ? 55 174 4 3 9VQI B 1 ? 120 ? I2FKG9 14 ? 133 ? 55 174 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5240 ? 1 MORE -55 ? 1 'SSA (A^2)' 19040 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA C 24 ? ILE C 32 ? ALA A 78 ILE A 86 1 ? 9 HELX_P HELX_P2 AA2 ILE C 32 ? GLY C 37 ? ILE A 86 GLY A 91 1 ? 6 HELX_P HELX_P3 AA3 GLY C 37 ? GLU C 45 ? GLY A 91 GLU A 99 1 ? 9 HELX_P HELX_P4 AA4 LYS C 80 ? PHE C 85 ? LYS A 134 PHE A 139 1 ? 6 HELX_P HELX_P5 AA5 ASP D 12 ? GLY D 16 ? ASP B 66 GLY B 70 5 ? 5 HELX_P HELX_P6 AA6 ALA D 24 ? ILE D 32 ? ALA B 78 ILE B 86 1 ? 9 HELX_P HELX_P7 AA7 ILE D 32 ? GLY D 37 ? ILE B 86 GLY B 91 1 ? 6 HELX_P HELX_P8 AA8 GLY D 37 ? GLU D 45 ? GLY B 91 GLU B 99 1 ? 9 HELX_P HELX_P9 AA9 LYS D 80 ? PHE D 85 ? LYS B 134 PHE B 139 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C PRO 34 C ? ? ? 1_555 C MSE 35 N ? ? A PRO 88 A MSE 89 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? C MSE 35 C ? ? ? 1_555 C LEU 36 N ? ? A MSE 89 A LEU 90 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? C ASP 55 C ? ? ? 1_555 C MSE 56 N ? ? A ASP 109 A MSE 110 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? C MSE 56 C ? ? ? 1_555 C ASP 57 N ? ? A MSE 110 A ASP 111 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale5 covale both ? C SER 60 C ? ? ? 1_555 C MSE 61 N ? ? A SER 114 A MSE 115 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale6 covale both ? C MSE 61 C ? ? ? 1_555 C HIS 62 N ? ? A MSE 115 A HIS 116 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? C ALA 116 C ? ? ? 1_555 C MSE 117 N ? ? A ALA 170 A MSE 171 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale8 covale both ? C MSE 117 C ? ? ? 1_555 C PRO 118 N ? ? A MSE 171 A PRO 172 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale9 covale both ? D PRO 34 C ? ? ? 1_555 D MSE 35 N ? ? B PRO 88 B MSE 89 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale10 covale both ? D MSE 35 C ? ? ? 1_555 D LEU 36 N ? ? B MSE 89 B LEU 90 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale11 covale both ? D ASP 55 C ? ? ? 1_555 D MSE 56 N ? ? B ASP 109 B MSE 110 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale12 covale both ? D MSE 56 C ? ? ? 1_555 D ASP 57 N ? ? B MSE 110 B ASP 111 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale13 covale both ? D SER 60 C ? ? ? 1_555 D MSE 61 N ? ? B SER 114 B MSE 115 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale14 covale both ? D MSE 61 C ? ? ? 1_555 D HIS 62 N ? ? B MSE 115 B HIS 116 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale15 covale both ? D ALA 116 C ? ? ? 1_555 D MSE 117 N ? ? B ALA 170 B MSE 171 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale16 covale both ? D MSE 117 C ? ? ? 1_555 D PRO 118 N ? ? B MSE 171 B PRO 172 1_555 ? ? ? ? ? ? ? 1.336 ? ? hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 B DT 20 N3 ? ? C DA 1 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 B DT 20 O4 ? ? C DA 1 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 19 N3 ? ? C DG 2 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 19 O2 ? ? C DG 2 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 19 N4 ? ? C DG 2 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 18 N3 ? ? C DA 3 D DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 18 O4 ? ? C DA 3 D DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 17 N3 ? ? C DG 4 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 17 O2 ? ? C DG 4 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 17 N4 ? ? C DG 4 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 16 N3 ? ? C DA 5 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 16 O4 ? ? C DA 5 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 15 N3 ? ? C DG 6 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 15 O2 ? ? C DG 6 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 15 N4 ? ? C DG 6 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 14 N3 ? ? C DA 7 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 14 O4 ? ? C DA 7 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 13 N3 ? ? C DA 8 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 13 O4 ? ? C DA 8 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 9 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 9 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 11 N3 ? ? C DA 10 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 11 O4 ? ? C DA 10 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 10 N1 ? ? C DT 11 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 10 N6 ? ? C DT 11 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 9 N3 ? ? C DG 12 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 9 O2 ? ? C DG 12 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 9 N4 ? ? C DG 12 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 13 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 13 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 7 N3 ? ? C DG 14 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 7 O2 ? ? C DG 14 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 7 N4 ? ? C DG 14 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 15 N1 ? ? ? 1_555 B DT 6 N3 ? ? C DA 15 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 15 N6 ? ? ? 1_555 B DT 6 O4 ? ? C DA 15 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 5 N3 ? ? C DA 16 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 5 O4 ? ? C DA 16 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 17 N1 ? ? ? 1_555 B DC 4 N3 ? ? C DG 17 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 17 N2 ? ? ? 1_555 B DC 4 O2 ? ? C DG 17 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 17 O6 ? ? ? 1_555 B DC 4 N4 ? ? C DG 17 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DA 18 N1 ? ? ? 1_555 B DT 3 N3 ? ? C DA 18 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DA 18 N6 ? ? ? 1_555 B DT 3 O4 ? ? C DA 18 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DT 19 N3 ? ? ? 1_555 B DA 2 N1 ? ? C DT 19 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DT 19 O4 ? ? ? 1_555 B DA 2 N6 ? ? C DT 19 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 20 N1 ? ? ? 1_555 B DC 1 N3 ? ? C DG 20 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 20 N2 ? ? ? 1_555 B DC 1 O2 ? ? C DG 20 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DG 20 O6 ? ? ? 1_555 B DC 1 N4 ? ? C DG 20 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE C 35 ? . . . . MSE A 89 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE C 56 ? . . . . MSE A 110 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE C 61 ? . . . . MSE A 115 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE C 117 ? . . . . MSE A 171 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE D 35 ? . . . . MSE B 89 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 6 MSE D 56 ? . . . . MSE B 110 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 7 MSE D 61 ? . . . . MSE B 115 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 8 MSE D 117 ? . . . . MSE B 171 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE C 6 ? THR C 9 ? ILE A 60 THR A 63 AA1 2 GLU C 96 ? ASP C 102 ? GLU A 150 ASP A 156 AA1 3 VAL C 107 ? LYS C 114 ? VAL A 161 LYS A 168 AA1 4 THR C 49 ? ASP C 55 ? THR A 103 ASP A 109 AA1 5 SER C 60 ? ARG C 68 ? SER A 114 ARG A 122 AA1 6 TYR C 75 ? ILE C 78 ? TYR A 129 ILE A 132 AA1 7 LEU C 21 ? LEU C 23 ? LEU A 75 LEU A 77 AA2 1 ILE D 6 ? THR D 9 ? ILE B 60 THR B 63 AA2 2 GLU D 96 ? ASP D 102 ? GLU B 150 ASP B 156 AA2 3 VAL D 107 ? LYS D 114 ? VAL B 161 LYS B 168 AA2 4 THR D 49 ? ASP D 55 ? THR B 103 ASP B 109 AA2 5 SER D 60 ? LYS D 67 ? SER B 114 LYS B 121 AA2 6 TYR D 75 ? GLY D 79 ? TYR B 129 GLY B 133 AA2 7 LEU D 21 ? LEU D 23 ? LEU B 75 LEU B 77 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS C 8 ? N LYS A 62 O ILE C 97 ? O ILE A 151 AA1 2 3 N ASP C 102 ? N ASP A 156 O VAL C 107 ? O VAL A 161 AA1 3 4 O PHE C 110 ? O PHE A 164 N TRP C 54 ? N TRP A 108 AA1 4 5 N VAL C 53 ? N VAL A 107 O HIS C 62 ? O HIS A 116 AA1 5 6 N LYS C 67 ? N LYS A 121 O VAL C 76 ? O VAL A 130 AA1 6 7 O TYR C 75 ? O TYR A 129 N LEU C 23 ? N LEU A 77 AA2 1 2 N LYS D 8 ? N LYS B 62 O ILE D 97 ? O ILE B 151 AA2 2 3 N ASP D 102 ? N ASP B 156 O VAL D 107 ? O VAL B 161 AA2 3 4 O PHE D 110 ? O PHE B 164 N TRP D 54 ? N TRP B 108 AA2 4 5 N VAL D 53 ? N VAL B 107 O HIS D 62 ? O HIS B 116 AA2 5 6 N LYS D 67 ? N LYS B 121 O VAL D 76 ? O VAL B 130 AA2 6 7 O TYR D 75 ? O TYR B 129 N LEU D 23 ? N LEU B 77 # _pdbx_entry_details.entry_id 9VQI _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 86 ? ? -131.39 -49.62 2 1 THR A 100 ? ? -122.20 -68.97 3 1 ILE A 132 ? ? -124.62 -165.44 4 1 PHE A 139 ? ? -131.82 -52.72 5 1 ILE B 86 ? ? -133.15 -52.91 6 1 THR B 100 ? ? -117.95 -71.74 7 1 PHE B 139 ? ? -133.38 -52.94 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 C MSE 35 A MSE 89 ? MET 'modified residue' 2 C MSE 56 A MSE 110 ? MET 'modified residue' 3 C MSE 61 A MSE 115 ? MET 'modified residue' 4 C MSE 117 A MSE 171 ? MET 'modified residue' 5 D MSE 35 B MSE 89 ? MET 'modified residue' 6 D MSE 56 B MSE 110 ? MET 'modified residue' 7 D MSE 61 B MSE 115 ? MET 'modified residue' 8 D MSE 117 B MSE 171 ? MET 'modified residue' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x-y,x,z+1/2 3 y,-x+y,z+1/2 4 -y,x-y,z 5 -x+y,-x,z 6 -x,-y,z+1/2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MLT C1 C N N 373 MLT O1 O N N 374 MLT O2 O N N 375 MLT C2 C N R 376 MLT O3 O N N 377 MLT C3 C N N 378 MLT C4 C N N 379 MLT O4 O N N 380 MLT O5 O N N 381 MLT H2 H N N 382 MLT HO3 H N N 383 MLT H31 H N N 384 MLT H32 H N N 385 MLT HO5 H N N 386 MLT H6 H N N 387 MSE N N N N 388 MSE CA C N S 389 MSE C C N N 390 MSE O O N N 391 MSE OXT O N N 392 MSE CB C N N 393 MSE CG C N N 394 MSE SE SE N N 395 MSE CE C N N 396 MSE H H N N 397 MSE H2 H N N 398 MSE HA H N N 399 MSE HXT H N N 400 MSE HB2 H N N 401 MSE HB3 H N N 402 MSE HG2 H N N 403 MSE HG3 H N N 404 MSE HE1 H N N 405 MSE HE2 H N N 406 MSE HE3 H N N 407 PHE N N N N 408 PHE CA C N S 409 PHE C C N N 410 PHE O O N N 411 PHE CB C N N 412 PHE CG C Y N 413 PHE CD1 C Y N 414 PHE CD2 C Y N 415 PHE CE1 C Y N 416 PHE CE2 C Y N 417 PHE CZ C Y N 418 PHE OXT O N N 419 PHE H H N N 420 PHE H2 H N N 421 PHE HA H N N 422 PHE HB2 H N N 423 PHE HB3 H N N 424 PHE HD1 H N N 425 PHE HD2 H N N 426 PHE HE1 H N N 427 PHE HE2 H N N 428 PHE HZ H N N 429 PHE HXT H N N 430 PRO N N N N 431 PRO CA C N S 432 PRO C C N N 433 PRO O O N N 434 PRO CB C N N 435 PRO CG C N N 436 PRO CD C N N 437 PRO OXT O N N 438 PRO H H N N 439 PRO HA H N N 440 PRO HB2 H N N 441 PRO HB3 H N N 442 PRO HG2 H N N 443 PRO HG3 H N N 444 PRO HD2 H N N 445 PRO HD3 H N N 446 PRO HXT H N N 447 SER N N N N 448 SER CA C N S 449 SER C C N N 450 SER O O N N 451 SER CB C N N 452 SER OG O N N 453 SER OXT O N N 454 SER H H N N 455 SER H2 H N N 456 SER HA H N N 457 SER HB2 H N N 458 SER HB3 H N N 459 SER HG H N N 460 SER HXT H N N 461 THR N N N N 462 THR CA C N S 463 THR C C N N 464 THR O O N N 465 THR CB C N R 466 THR OG1 O N N 467 THR CG2 C N N 468 THR OXT O N N 469 THR H H N N 470 THR H2 H N N 471 THR HA H N N 472 THR HB H N N 473 THR HG1 H N N 474 THR HG21 H N N 475 THR HG22 H N N 476 THR HG23 H N N 477 THR HXT H N N 478 TRP N N N N 479 TRP CA C N S 480 TRP C C N N 481 TRP O O N N 482 TRP CB C N N 483 TRP CG C Y N 484 TRP CD1 C Y N 485 TRP CD2 C Y N 486 TRP NE1 N Y N 487 TRP CE2 C Y N 488 TRP CE3 C Y N 489 TRP CZ2 C Y N 490 TRP CZ3 C Y N 491 TRP CH2 C Y N 492 TRP OXT O N N 493 TRP H H N N 494 TRP H2 H N N 495 TRP HA H N N 496 TRP HB2 H N N 497 TRP HB3 H N N 498 TRP HD1 H N N 499 TRP HE1 H N N 500 TRP HE3 H N N 501 TRP HZ2 H N N 502 TRP HZ3 H N N 503 TRP HH2 H N N 504 TRP HXT H N N 505 TYR N N N N 506 TYR CA C N S 507 TYR C C N N 508 TYR O O N N 509 TYR CB C N N 510 TYR CG C Y N 511 TYR CD1 C Y N 512 TYR CD2 C Y N 513 TYR CE1 C Y N 514 TYR CE2 C Y N 515 TYR CZ C Y N 516 TYR OH O N N 517 TYR OXT O N N 518 TYR H H N N 519 TYR H2 H N N 520 TYR HA H N N 521 TYR HB2 H N N 522 TYR HB3 H N N 523 TYR HD1 H N N 524 TYR HD2 H N N 525 TYR HE1 H N N 526 TYR HE2 H N N 527 TYR HH H N N 528 TYR HXT H N N 529 VAL N N N N 530 VAL CA C N S 531 VAL C C N N 532 VAL O O N N 533 VAL CB C N N 534 VAL CG1 C N N 535 VAL CG2 C N N 536 VAL OXT O N N 537 VAL H H N N 538 VAL H2 H N N 539 VAL HA H N N 540 VAL HB H N N 541 VAL HG11 H N N 542 VAL HG12 H N N 543 VAL HG13 H N N 544 VAL HG21 H N N 545 VAL HG22 H N N 546 VAL HG23 H N N 547 VAL HXT H N N 548 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MLT C1 O1 doub N N 367 MLT C1 O2 sing N N 368 MLT C1 C2 sing N N 369 MLT C2 O3 sing N N 370 MLT C2 C3 sing N N 371 MLT C2 H2 sing N N 372 MLT O3 HO3 sing N N 373 MLT C3 C4 sing N N 374 MLT C3 H31 sing N N 375 MLT C3 H32 sing N N 376 MLT C4 O4 doub N N 377 MLT C4 O5 sing N N 378 MLT O5 HO5 sing N N 379 MLT O2 H6 sing N N 380 MSE N CA sing N N 381 MSE N H sing N N 382 MSE N H2 sing N N 383 MSE CA C sing N N 384 MSE CA CB sing N N 385 MSE CA HA sing N N 386 MSE C O doub N N 387 MSE C OXT sing N N 388 MSE OXT HXT sing N N 389 MSE CB CG sing N N 390 MSE CB HB2 sing N N 391 MSE CB HB3 sing N N 392 MSE CG SE sing N N 393 MSE CG HG2 sing N N 394 MSE CG HG3 sing N N 395 MSE SE CE sing N N 396 MSE CE HE1 sing N N 397 MSE CE HE2 sing N N 398 MSE CE HE3 sing N N 399 PHE N CA sing N N 400 PHE N H sing N N 401 PHE N H2 sing N N 402 PHE CA C sing N N 403 PHE CA CB sing N N 404 PHE CA HA sing N N 405 PHE C O doub N N 406 PHE C OXT sing N N 407 PHE CB CG sing N N 408 PHE CB HB2 sing N N 409 PHE CB HB3 sing N N 410 PHE CG CD1 doub Y N 411 PHE CG CD2 sing Y N 412 PHE CD1 CE1 sing Y N 413 PHE CD1 HD1 sing N N 414 PHE CD2 CE2 doub Y N 415 PHE CD2 HD2 sing N N 416 PHE CE1 CZ doub Y N 417 PHE CE1 HE1 sing N N 418 PHE CE2 CZ sing Y N 419 PHE CE2 HE2 sing N N 420 PHE CZ HZ sing N N 421 PHE OXT HXT sing N N 422 PRO N CA sing N N 423 PRO N CD sing N N 424 PRO N H sing N N 425 PRO CA C sing N N 426 PRO CA CB sing N N 427 PRO CA HA sing N N 428 PRO C O doub N N 429 PRO C OXT sing N N 430 PRO CB CG sing N N 431 PRO CB HB2 sing N N 432 PRO CB HB3 sing N N 433 PRO CG CD sing N N 434 PRO CG HG2 sing N N 435 PRO CG HG3 sing N N 436 PRO CD HD2 sing N N 437 PRO CD HD3 sing N N 438 PRO OXT HXT sing N N 439 SER N CA sing N N 440 SER N H sing N N 441 SER N H2 sing N N 442 SER CA C sing N N 443 SER CA CB sing N N 444 SER CA HA sing N N 445 SER C O doub N N 446 SER C OXT sing N N 447 SER CB OG sing N N 448 SER CB HB2 sing N N 449 SER CB HB3 sing N N 450 SER OG HG sing N N 451 SER OXT HXT sing N N 452 THR N CA sing N N 453 THR N H sing N N 454 THR N H2 sing N N 455 THR CA C sing N N 456 THR CA CB sing N N 457 THR CA HA sing N N 458 THR C O doub N N 459 THR C OXT sing N N 460 THR CB OG1 sing N N 461 THR CB CG2 sing N N 462 THR CB HB sing N N 463 THR OG1 HG1 sing N N 464 THR CG2 HG21 sing N N 465 THR CG2 HG22 sing N N 466 THR CG2 HG23 sing N N 467 THR OXT HXT sing N N 468 TRP N CA sing N N 469 TRP N H sing N N 470 TRP N H2 sing N N 471 TRP CA C sing N N 472 TRP CA CB sing N N 473 TRP CA HA sing N N 474 TRP C O doub N N 475 TRP C OXT sing N N 476 TRP CB CG sing N N 477 TRP CB HB2 sing N N 478 TRP CB HB3 sing N N 479 TRP CG CD1 doub Y N 480 TRP CG CD2 sing Y N 481 TRP CD1 NE1 sing Y N 482 TRP CD1 HD1 sing N N 483 TRP CD2 CE2 doub Y N 484 TRP CD2 CE3 sing Y N 485 TRP NE1 CE2 sing Y N 486 TRP NE1 HE1 sing N N 487 TRP CE2 CZ2 sing Y N 488 TRP CE3 CZ3 doub Y N 489 TRP CE3 HE3 sing N N 490 TRP CZ2 CH2 doub Y N 491 TRP CZ2 HZ2 sing N N 492 TRP CZ3 CH2 sing Y N 493 TRP CZ3 HZ3 sing N N 494 TRP CH2 HH2 sing N N 495 TRP OXT HXT sing N N 496 TYR N CA sing N N 497 TYR N H sing N N 498 TYR N H2 sing N N 499 TYR CA C sing N N 500 TYR CA CB sing N N 501 TYR CA HA sing N N 502 TYR C O doub N N 503 TYR C OXT sing N N 504 TYR CB CG sing N N 505 TYR CB HB2 sing N N 506 TYR CB HB3 sing N N 507 TYR CG CD1 doub Y N 508 TYR CG CD2 sing Y N 509 TYR CD1 CE1 sing Y N 510 TYR CD1 HD1 sing N N 511 TYR CD2 CE2 doub Y N 512 TYR CD2 HD2 sing N N 513 TYR CE1 CZ doub Y N 514 TYR CE1 HE1 sing N N 515 TYR CE2 CZ sing Y N 516 TYR CE2 HE2 sing N N 517 TYR CZ OH sing N N 518 TYR OH HH sing N N 519 TYR OXT HXT sing N N 520 VAL N CA sing N N 521 VAL N H sing N N 522 VAL N H2 sing N N 523 VAL CA C sing N N 524 VAL CA CB sing N N 525 VAL CA HA sing N N 526 VAL C O doub N N 527 VAL C OXT sing N N 528 VAL CB CG1 sing N N 529 VAL CB CG2 sing N N 530 VAL CB HB sing N N 531 VAL CG1 HG11 sing N N 532 VAL CG1 HG12 sing N N 533 VAL CG1 HG13 sing N N 534 VAL CG2 HG21 sing N N 535 VAL CG2 HG22 sing N N 536 VAL CG2 HG23 sing N N 537 VAL OXT HXT sing N N 538 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9VQI 'double helix' 9VQI 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 B DT 20 1_555 0.096 -0.154 0.279 5.254 -5.995 1.627 1 C_DA1:DT20_D C 1 ? D 20 ? 20 1 1 A DG 2 1_555 B DC 19 1_555 -0.212 -0.159 0.122 1.744 -10.259 1.766 2 C_DG2:DC19_D C 2 ? D 19 ? 19 1 1 A DA 3 1_555 B DT 18 1_555 0.173 -0.037 -0.067 -2.216 -12.446 -4.855 3 C_DA3:DT18_D C 3 ? D 18 ? 20 1 1 A DG 4 1_555 B DC 17 1_555 -0.198 -0.158 -0.042 2.465 -4.530 1.984 4 C_DG4:DC17_D C 4 ? D 17 ? 19 1 1 A DA 5 1_555 B DT 16 1_555 0.126 -0.073 -0.068 0.786 -8.010 -1.223 5 C_DA5:DT16_D C 5 ? D 16 ? 20 1 1 A DG 6 1_555 B DC 15 1_555 -0.350 -0.085 -0.242 2.180 -9.969 4.562 6 C_DG6:DC15_D C 6 ? D 15 ? 19 1 1 A DA 7 1_555 B DT 14 1_555 0.049 -0.121 -0.297 -3.543 -13.435 1.970 7 C_DA7:DT14_D C 7 ? D 14 ? 20 1 1 A DA 8 1_555 B DT 13 1_555 0.052 -0.093 -0.226 -4.141 -14.577 2.420 8 C_DA8:DT13_D C 8 ? D 13 ? 20 1 1 A DA 9 1_555 B DT 12 1_555 0.171 -0.128 -0.121 -4.968 -16.381 0.265 9 C_DA9:DT12_D C 9 ? D 12 ? 20 1 1 A DA 10 1_555 B DT 11 1_555 0.051 -0.129 -0.289 -9.886 -14.738 3.840 10 C_DA10:DT11_D C 10 ? D 11 ? 20 1 1 A DT 11 1_555 B DA 10 1_555 -0.119 -0.070 -0.007 -7.914 -7.413 -0.129 11 C_DT11:DA10_D C 11 ? D 10 ? 20 1 1 A DG 12 1_555 B DC 9 1_555 -0.216 -0.120 0.025 -4.137 -5.729 2.148 12 C_DG12:DC9_D C 12 ? D 9 ? 19 1 1 A DA 13 1_555 B DT 8 1_555 0.092 -0.161 -0.067 -1.753 -1.224 -0.966 13 C_DA13:DT8_D C 13 ? D 8 ? 20 1 1 A DG 14 1_555 B DC 7 1_555 -0.176 -0.139 0.049 3.592 -2.568 1.968 14 C_DG14:DC7_D C 14 ? D 7 ? 19 1 1 A DA 15 1_555 B DT 6 1_555 0.084 -0.133 0.294 2.631 -8.163 -0.299 15 C_DA15:DT6_D C 15 ? D 6 ? 20 1 1 A DA 16 1_555 B DT 5 1_555 0.054 -0.127 0.181 0.179 -10.892 2.238 16 C_DA16:DT5_D C 16 ? D 5 ? 20 1 1 A DG 17 1_555 B DC 4 1_555 -0.224 -0.149 -0.151 -2.681 -12.237 2.003 17 C_DG17:DC4_D C 17 ? D 4 ? 19 1 1 A DA 18 1_555 B DT 3 1_555 0.075 -0.170 -0.475 -8.519 -14.369 3.530 18 C_DA18:DT3_D C 18 ? D 3 ? 20 1 1 A DT 19 1_555 B DA 2 1_555 -0.098 -0.102 -0.055 -12.003 -13.653 1.360 19 C_DT19:DA2_D C 19 ? D 2 ? 20 1 1 A DG 20 1_555 B DC 1 1_555 -0.210 -0.113 -0.115 -8.697 -7.111 1.776 20 C_DG20:DC1_D C 20 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 B DT 20 1_555 A DG 2 1_555 B DC 19 1_555 -0.255 -0.216 3.507 1.544 -1.533 35.115 -0.113 0.668 3.499 -2.539 -2.557 35.180 1 CC_DA1DG2:DC19DT20_DD C 1 ? D 20 ? C 2 ? D 19 ? 1 A DG 2 1_555 B DC 19 1_555 A DA 3 1_555 B DT 18 1_555 -1.317 0.406 3.318 -4.757 1.545 39.980 0.408 1.353 3.459 2.249 6.924 40.279 2 CC_DG2DA3:DT18DC19_DD C 2 ? D 19 ? C 3 ? D 18 ? 1 A DA 3 1_555 B DT 18 1_555 A DG 4 1_555 B DC 17 1_555 1.060 0.028 3.247 -0.500 -3.697 32.370 0.687 -1.976 3.207 -6.604 0.894 32.578 3 CC_DA3DG4:DC17DT18_DD C 3 ? D 18 ? C 4 ? D 17 ? 1 A DG 4 1_555 B DC 17 1_555 A DA 5 1_555 B DT 16 1_555 -1.289 0.730 3.388 -5.959 1.970 39.748 0.823 1.151 3.567 2.875 8.699 40.221 4 CC_DG4DA5:DT16DC17_DD C 4 ? D 17 ? C 5 ? D 16 ? 1 A DA 5 1_555 B DT 16 1_555 A DG 6 1_555 B DC 15 1_555 0.853 -0.121 3.334 1.824 1.199 28.485 -0.525 -1.304 3.373 2.431 -3.699 28.567 5 CC_DA5DG6:DC15DT16_DD C 5 ? D 16 ? C 6 ? D 15 ? 1 A DG 6 1_555 B DC 15 1_555 A DA 7 1_555 B DT 14 1_555 -0.853 0.510 3.376 -3.770 -0.610 40.886 0.796 0.788 3.431 -0.870 5.383 41.056 6 CC_DG6DA7:DT14DC15_DD C 6 ? D 15 ? C 7 ? D 14 ? 1 A DA 7 1_555 B DT 14 1_555 A DA 8 1_555 B DT 13 1_555 0.005 -0.269 3.239 -2.636 -1.101 38.350 -0.272 -0.332 3.237 -1.674 4.006 38.452 7 CC_DA7DA8:DT13DT14_DD C 7 ? D 14 ? C 8 ? D 13 ? 1 A DA 8 1_555 B DT 13 1_555 A DA 9 1_555 B DT 12 1_555 -0.496 -0.257 3.193 -3.065 -0.193 36.410 -0.384 0.375 3.224 -0.308 4.894 36.535 8 CC_DA8DA9:DT12DT13_DD C 8 ? D 13 ? C 9 ? D 12 ? 1 A DA 9 1_555 B DT 12 1_555 A DA 10 1_555 B DT 11 1_555 -0.262 -0.306 3.266 -1.673 -0.880 37.452 -0.361 0.188 3.280 -1.370 2.604 37.498 9 CC_DA9DA10:DT11DT12_DD C 9 ? D 12 ? C 10 ? D 11 ? 1 A DA 10 1_555 B DT 11 1_555 A DT 11 1_555 B DA 10 1_555 -0.028 -0.650 3.300 -3.334 -3.074 34.615 -0.609 -0.467 3.332 -5.140 5.574 34.902 10 CC_DA10DT11:DA10DT11_DD C 10 ? D 11 ? C 11 ? D 10 ? 1 A DT 11 1_555 B DA 10 1_555 A DG 12 1_555 B DC 9 1_555 0.496 -0.223 3.282 -3.111 3.118 31.510 -0.973 -1.469 3.184 5.706 5.694 31.809 11 CC_DT11DG12:DC9DA10_DD C 11 ? D 10 ? C 12 ? D 9 ? 1 A DG 12 1_555 B DC 9 1_555 A DA 13 1_555 B DT 8 1_555 -0.773 -0.614 3.208 -2.525 0.740 35.676 -1.104 0.900 3.241 1.205 4.114 35.770 12 CC_DG12DA13:DT8DC9_DD C 12 ? D 9 ? C 13 ? D 8 ? 1 A DA 13 1_555 B DT 8 1_555 A DG 14 1_555 B DC 7 1_555 0.217 -0.315 3.227 -2.190 2.171 30.729 -1.005 -0.825 3.175 4.083 4.120 30.880 13 CC_DA13DG14:DC7DT8_DD C 13 ? D 8 ? C 14 ? D 7 ? 1 A DG 14 1_555 B DC 7 1_555 A DA 15 1_555 B DT 6 1_555 -0.315 -0.279 3.183 -2.316 1.889 38.871 -0.641 0.199 3.180 2.834 3.473 38.981 14 CC_DG14DA15:DT6DC7_DD C 14 ? D 7 ? C 15 ? D 6 ? 1 A DA 15 1_555 B DT 6 1_555 A DA 16 1_555 B DT 5 1_555 -0.066 -0.509 3.316 -0.881 -2.322 35.734 -0.488 -0.022 3.342 -3.779 1.434 35.818 15 CC_DA15DA16:DT5DT6_DD C 15 ? D 6 ? C 16 ? D 5 ? 1 A DA 16 1_555 B DT 5 1_555 A DG 17 1_555 B DC 4 1_555 -0.291 -0.808 3.318 -0.327 -0.539 33.044 -1.328 0.456 3.333 -0.948 0.574 33.050 16 CC_DA16DG17:DC4DT5_DD C 16 ? D 5 ? C 17 ? D 4 ? 1 A DG 17 1_555 B DC 4 1_555 A DA 18 1_555 B DT 3 1_555 -0.496 -0.122 3.349 0.724 0.847 42.196 -0.258 0.765 3.337 1.176 -1.005 42.211 17 CC_DG17DA18:DT3DC4_DD C 17 ? D 4 ? C 18 ? D 3 ? 1 A DA 18 1_555 B DT 3 1_555 A DT 19 1_555 B DA 2 1_555 -0.029 -0.056 3.328 -2.749 -1.799 35.176 0.179 -0.365 3.319 -2.969 4.537 35.325 18 CC_DA18DT19:DA2DT3_DD C 18 ? D 3 ? C 19 ? D 2 ? 1 A DT 19 1_555 B DA 2 1_555 A DG 20 1_555 B DC 1 1_555 0.148 0.716 3.403 -3.296 3.547 37.717 0.625 -0.667 3.429 5.459 5.072 38.015 19 CC_DT19DG20:DC1DA2_DD C 19 ? D 2 ? C 20 ? D 1 ? # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _space_group.name_H-M_alt 'P 63' _space_group.name_Hall 'P 6c' _space_group.IT_number 173 _space_group.crystal_system hexagonal _space_group.id 1 # _atom_sites.entry_id 9VQI _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.011241 _atom_sites.fract_transf_matrix[1][2] 0.006490 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012980 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007866 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 5.12366 3.84317 ? ? 3.49406 27.47979 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? SE ? ? 26.02326 7.89457 ? ? 1.54240 29.12501 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ #