HEADER TRANSFERASE 10-JUL-25 9VTB TITLE CRYSTAL STRUCTURE OF FJOF BOUND WITH GSPP COMPND MOL_ID: 1; COMPND 2 MOLECULE: FJOF; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: UNIPARC:UPI001229270A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FLAVOBACTERIUM; SOURCE 3 ORGANISM_TAXID: 237; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PRENYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.INOUE,K.HAMADA,Y.GOTO,H.SUGA,T.SENGOKU REVDAT 1 24-JUN-26 9VTB 0 JRNL AUTH S.INOUE JRNL TITL RAPID SCREENING PLATFORM FOR PEPTIDE PRENYLTRANSFERASES TO JRNL TITL 2 DIVERSIFY PSEUDO-NATURAL PRENYLATED PEPTIDES JRNL REF NAT CATAL JRNL REFN ESSN 2520-1158 REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 99374 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.0200 - 3.6500 1.00 7300 151 0.1550 0.1670 REMARK 3 2 3.6500 - 2.9000 1.00 7094 147 0.1696 0.1924 REMARK 3 3 2.9000 - 2.5300 1.00 7009 139 0.1845 0.2129 REMARK 3 4 2.5300 - 2.3000 1.00 6980 147 0.1772 0.2088 REMARK 3 5 2.3000 - 2.1400 1.00 6958 141 0.1742 0.1911 REMARK 3 6 2.1400 - 2.0100 1.00 6956 145 0.1715 0.1933 REMARK 3 7 2.0100 - 1.9100 1.00 6924 136 0.1737 0.2078 REMARK 3 8 1.9100 - 1.8300 1.00 6925 141 0.1832 0.2131 REMARK 3 9 1.8300 - 1.7600 1.00 6920 138 0.1913 0.2209 REMARK 3 10 1.7600 - 1.7000 1.00 6895 154 0.2239 0.2537 REMARK 3 11 1.7000 - 1.6400 1.00 6888 143 0.2197 0.2523 REMARK 3 12 1.6400 - 1.6000 1.00 6889 138 0.2367 0.2338 REMARK 3 13 1.6000 - 1.5500 1.00 6857 142 0.2664 0.3257 REMARK 3 14 1.5500 - 1.5200 0.98 6776 141 0.3268 0.3306 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.578 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4781 REMARK 3 ANGLE : 1.022 6447 REMARK 3 CHIRALITY : 0.063 697 REMARK 3 PLANARITY : 0.008 822 REMARK 3 DIHEDRAL : 5.731 634 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1673 -15.6689 -8.7369 REMARK 3 T TENSOR REMARK 3 T11: 0.1205 T22: 0.1023 REMARK 3 T33: 0.1110 T12: 0.0154 REMARK 3 T13: -0.0003 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.6337 L22: 2.4955 REMARK 3 L33: 1.9215 L12: -0.1271 REMARK 3 L13: -0.8496 L23: 0.2288 REMARK 3 S TENSOR REMARK 3 S11: 0.0507 S12: -0.0498 S13: 0.0477 REMARK 3 S21: 0.2073 S22: -0.0651 S23: 0.2020 REMARK 3 S31: -0.0796 S32: -0.1588 S33: 0.0110 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9796 -31.2037 -17.8758 REMARK 3 T TENSOR REMARK 3 T11: 0.0989 T22: 0.1043 REMARK 3 T33: 0.1374 T12: -0.0066 REMARK 3 T13: -0.0514 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 1.8062 L22: 1.5673 REMARK 3 L33: 1.0322 L12: -0.5480 REMARK 3 L13: -0.2402 L23: 0.2815 REMARK 3 S TENSOR REMARK 3 S11: -0.0159 S12: 0.1148 S13: -0.1033 REMARK 3 S21: -0.0726 S22: -0.0903 S23: 0.2295 REMARK 3 S31: 0.0067 S32: -0.1656 S33: 0.0622 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 192 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7535 -17.6480 -26.2761 REMARK 3 T TENSOR REMARK 3 T11: 0.1129 T22: 0.1195 REMARK 3 T33: 0.1396 T12: -0.0181 REMARK 3 T13: -0.0057 T23: 0.0470 REMARK 3 L TENSOR REMARK 3 L11: 1.6996 L22: 2.0711 REMARK 3 L33: 2.1209 L12: -1.1055 REMARK 3 L13: -1.0016 L23: 0.0190 REMARK 3 S TENSOR REMARK 3 S11: 0.1311 S12: 0.0977 S13: 0.2920 REMARK 3 S21: -0.0531 S22: -0.0620 S23: -0.3177 REMARK 3 S31: -0.1838 S32: 0.0682 S33: -0.0340 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 7 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.0484 -57.9709 3.1446 REMARK 3 T TENSOR REMARK 3 T11: 0.1549 T22: 0.1445 REMARK 3 T33: 0.0967 T12: -0.0118 REMARK 3 T13: 0.0174 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 4.4605 L22: 2.9343 REMARK 3 L33: 2.4475 L12: 0.1234 REMARK 3 L13: -0.2824 L23: -0.8052 REMARK 3 S TENSOR REMARK 3 S11: 0.1825 S12: -0.3941 S13: -0.1028 REMARK 3 S21: 0.3904 S22: -0.1937 S23: 0.0415 REMARK 3 S31: -0.2266 S32: 0.1775 S33: 0.0072 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.7539 -44.3583 -4.9247 REMARK 3 T TENSOR REMARK 3 T11: 0.0608 T22: 0.0981 REMARK 3 T33: 0.0755 T12: 0.0038 REMARK 3 T13: 0.0019 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.2992 L22: 2.5942 REMARK 3 L33: 1.0686 L12: -0.7984 REMARK 3 L13: 0.2022 L23: 0.1900 REMARK 3 S TENSOR REMARK 3 S11: -0.0259 S12: 0.0598 S13: 0.0636 REMARK 3 S21: 0.0066 S22: -0.0327 S23: -0.0244 REMARK 3 S31: -0.0410 S32: 0.1116 S33: 0.0608 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 119 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2956 -44.2628 -15.5984 REMARK 3 T TENSOR REMARK 3 T11: 0.0891 T22: 0.1141 REMARK 3 T33: 0.0820 T12: 0.0057 REMARK 3 T13: 0.0016 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 2.6563 L22: 0.5772 REMARK 3 L33: 0.3067 L12: -0.3571 REMARK 3 L13: 0.7742 L23: -0.3036 REMARK 3 S TENSOR REMARK 3 S11: -0.0626 S12: 0.2985 S13: 0.0281 REMARK 3 S21: -0.0704 S22: -0.0081 S23: -0.0044 REMARK 3 S31: -0.0010 S32: 0.1039 S33: 0.0426 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 192 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6073 -59.3058 -17.3204 REMARK 3 T TENSOR REMARK 3 T11: 0.1684 T22: 0.1353 REMARK 3 T33: 0.1345 T12: 0.0176 REMARK 3 T13: -0.0236 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 1.5753 L22: 1.6295 REMARK 3 L33: 2.2633 L12: -0.5749 REMARK 3 L13: 1.1554 L23: -0.8520 REMARK 3 S TENSOR REMARK 3 S11: 0.1728 S12: 0.2316 S13: -0.3174 REMARK 3 S21: -0.3662 S22: -0.0315 S23: 0.2119 REMARK 3 S31: 0.3420 S32: 0.0888 S33: -0.0723 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9VTB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JUL-25. REMARK 100 THE DEPOSITION ID IS D_1300061096. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99374 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 45.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 68.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ALPHAFOLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES PH 6, 200 MM AMMONIUM REMARK 280 ACETATE, 21.4% PEG3350, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.58650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.10800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.05300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.10800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.58650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.05300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 SER A 3 REMARK 465 PHE A 4 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 SER B 3 REMARK 465 PHE B 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 557 O HOH B 591 2.11 REMARK 500 O HOH B 566 O HOH B 582 2.12 REMARK 500 OE2 GLU B 47 O HOH B 401 2.13 REMARK 500 O HOH A 435 O HOH A 607 2.15 REMARK 500 O HOH A 539 O HOH A 540 2.15 REMARK 500 O HOH B 595 O HOH B 625 2.15 REMARK 500 O HOH B 451 O HOH B 486 2.15 REMARK 500 O HOH B 666 O HOH B 667 2.15 REMARK 500 O HOH B 541 O HOH B 614 2.16 REMARK 500 O HOH B 571 O HOH B 637 2.16 REMARK 500 O HOH B 466 O HOH B 667 2.17 REMARK 500 O HOH A 463 O HOH A 566 2.17 REMARK 500 O HOH B 527 O HOH B 579 2.17 REMARK 500 O HOH A 618 O HOH A 648 2.17 REMARK 500 O HOH A 566 O HOH B 609 2.17 REMARK 500 O HOH A 589 O HOH A 641 2.18 REMARK 500 O HOH B 591 O HOH B 646 2.18 REMARK 500 O HOH B 497 O HOH B 537 2.18 REMARK 500 O HOH B 600 O HOH B 679 2.18 REMARK 500 OD2 ASP A 246 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 115 CA - CB - CG ANGL. DEV. = 15.7 DEGREES REMARK 500 PRO B 5 CA - N - CD ANGL. DEV. = -11.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET B 155 5.09 -69.23 REMARK 500 ASN B 275 63.19 -153.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 682 DISTANCE = 6.26 ANGSTROMS DBREF 9VTB A 1 283 PDB 9VTB 9VTB 1 283 DBREF 9VTB B 1 283 PDB 9VTB 9VTB 1 283 SEQRES 1 A 283 MET ASN SER PHE PRO VAL HIS LEU LYS GLU LYS GLN LEU SEQRES 2 A 283 LEU LYS PHE GLU THR HIS ILE LYS ASP PHE ASN ILE ALA SEQRES 3 A 283 GLU SER THR SER LEU LYS ALA PHE LYS ASN LEU ILE GLU SEQRES 4 A 283 ASN SER GLU GLN TYR PHE LEU GLU CYS SER CYS LYS ILE SEQRES 5 A 283 ILE ASN GLY VAL ILE SER GLY SER ARG PHE ALA LEU LEU SEQRES 6 A 283 PHE LYS ASP HIS GLU HIS ALA TYR ASN ILE LYS LYS SER SEQRES 7 A 283 PHE ASP PHE LEU ASN SER LEU LYS ASP ASN GLY ALA LYS SEQRES 8 A 283 LEU ASN TYR GLU LEU LEU ASP LYS VAL SER PHE GLU ASP SEQRES 9 A 283 LEU ASP LEU SER LYS VAL LYS ALA LEU GLY LEU GLY ILE SEQRES 10 A 283 ASP LEU ARG ASP ASP GLU ALA ALA SER ARG ALA LYS PHE SEQRES 11 A 283 TRP VAL ALA ILE GLU ASN SER ASN TYR ARG PHE PHE ASN SEQRES 12 A 283 SER ALA LEU ASP VAL PHE GLY TYR THR ASP ASN MET ALA SEQRES 13 A 283 ASN LEU PHE ASN LYS ASN GLU LEU LEU ILE GLY PHE ASP SEQRES 14 A 283 PHE TYR PHE ASN GLY LYS THR LYS MET LYS VAL TYR PRO SEQRES 15 A 283 HIS PHE TYR GLU TYR GLU LEU LYS ASN ALA VAL ILE SER SEQRES 16 A 283 LYS ARG LEU GLU ALA THR PHE SER PRO LEU ILE MET GLU SEQRES 17 A 283 MET ILE ASN GLN CYS TYR MET LEU TYR VAL SER PHE GLU SEQRES 18 A 283 GLY ALA ASP ASN TYR ARG LEU LEU HIS PHE ASN PRO HIS SEQRES 19 A 283 ASN LEU LYS LYS LEU CYS GLU LEU ILE ASN ASN ASP ASP SEQRES 20 A 283 LEU ASN LYS LEU ILE GLU ARG ILE SER TYR LYS TYR SER SEQRES 21 A 283 ASN CYS ILE VAL THR LEU ILE GLU ASN GLU ILE LEU GLU SEQRES 22 A 283 ASN ASN ILE LYS THR ILE ASN VAL TYR TYR SEQRES 1 B 283 MET ASN SER PHE PRO VAL HIS LEU LYS GLU LYS GLN LEU SEQRES 2 B 283 LEU LYS PHE GLU THR HIS ILE LYS ASP PHE ASN ILE ALA SEQRES 3 B 283 GLU SER THR SER LEU LYS ALA PHE LYS ASN LEU ILE GLU SEQRES 4 B 283 ASN SER GLU GLN TYR PHE LEU GLU CYS SER CYS LYS ILE SEQRES 5 B 283 ILE ASN GLY VAL ILE SER GLY SER ARG PHE ALA LEU LEU SEQRES 6 B 283 PHE LYS ASP HIS GLU HIS ALA TYR ASN ILE LYS LYS SER SEQRES 7 B 283 PHE ASP PHE LEU ASN SER LEU LYS ASP ASN GLY ALA LYS SEQRES 8 B 283 LEU ASN TYR GLU LEU LEU ASP LYS VAL SER PHE GLU ASP SEQRES 9 B 283 LEU ASP LEU SER LYS VAL LYS ALA LEU GLY LEU GLY ILE SEQRES 10 B 283 ASP LEU ARG ASP ASP GLU ALA ALA SER ARG ALA LYS PHE SEQRES 11 B 283 TRP VAL ALA ILE GLU ASN SER ASN TYR ARG PHE PHE ASN SEQRES 12 B 283 SER ALA LEU ASP VAL PHE GLY TYR THR ASP ASN MET ALA SEQRES 13 B 283 ASN LEU PHE ASN LYS ASN GLU LEU LEU ILE GLY PHE ASP SEQRES 14 B 283 PHE TYR PHE ASN GLY LYS THR LYS MET LYS VAL TYR PRO SEQRES 15 B 283 HIS PHE TYR GLU TYR GLU LEU LYS ASN ALA VAL ILE SER SEQRES 16 B 283 LYS ARG LEU GLU ALA THR PHE SER PRO LEU ILE MET GLU SEQRES 17 B 283 MET ILE ASN GLN CYS TYR MET LEU TYR VAL SER PHE GLU SEQRES 18 B 283 GLY ALA ASP ASN TYR ARG LEU LEU HIS PHE ASN PRO HIS SEQRES 19 B 283 ASN LEU LYS LYS LEU CYS GLU LEU ILE ASN ASN ASP ASP SEQRES 20 B 283 LEU ASN LYS LEU ILE GLU ARG ILE SER TYR LYS TYR SER SEQRES 21 B 283 ASN CYS ILE VAL THR LEU ILE GLU ASN GLU ILE LEU GLU SEQRES 22 B 283 ASN ASN ILE LYS THR ILE ASN VAL TYR TYR HET GST A 301 19 HET GST B 301 19 HETNAM GST GERANYL S-THIOLODIPHOSPHATE HETSYN GST S-[(2E)-3,7-DIMETHYLOCTA-2,6-DIENYL] TRIHYDROGEN HETSYN 2 GST THIODIPHOSPHATE FORMUL 3 GST 2(C10 H20 O6 P2 S) FORMUL 5 HOH *562(H2 O) HELIX 1 AA1 HIS A 7 PHE A 23 1 17 HELIX 2 AA2 SER A 28 ASN A 40 1 13 HELIX 3 AA3 GLU A 70 ASN A 88 1 19 HELIX 4 AA4 TYR A 94 VAL A 100 1 7 HELIX 5 AA5 SER A 101 LEU A 105 5 5 HELIX 6 AA6 ASP A 106 SER A 108 5 3 HELIX 7 AA7 ASP A 122 ALA A 125 5 4 HELIX 8 AA8 ASN A 138 GLY A 150 1 13 HELIX 9 AA9 THR A 152 PHE A 159 5 8 HELIX 10 AB1 TYR A 185 LYS A 190 1 6 HELIX 11 AB2 ASN A 191 PHE A 202 1 12 HELIX 12 AB3 SER A 203 ASN A 211 1 9 HELIX 13 AB4 ASN A 235 ASN A 244 1 10 HELIX 14 AB5 ASN A 245 ILE A 255 1 11 HELIX 15 AB6 GLU A 268 ASN A 274 1 7 HELIX 16 AB7 HIS B 7 ASN B 24 1 18 HELIX 17 AB8 SER B 28 ASN B 40 1 13 HELIX 18 AB9 GLU B 70 ASN B 88 1 19 HELIX 19 AC1 TYR B 94 VAL B 100 1 7 HELIX 20 AC2 SER B 101 LEU B 105 5 5 HELIX 21 AC3 ASP B 106 SER B 108 5 3 HELIX 22 AC4 ASP B 122 ALA B 125 5 4 HELIX 23 AC5 ASN B 138 GLY B 150 1 13 HELIX 24 AC6 THR B 152 PHE B 159 5 8 HELIX 25 AC7 GLU B 186 LYS B 190 1 5 HELIX 26 AC8 ASN B 191 ALA B 200 1 10 HELIX 27 AC9 SER B 203 ASN B 211 1 9 HELIX 28 AD1 ASN B 235 ASN B 244 1 10 HELIX 29 AD2 ASN B 245 ILE B 255 1 11 HELIX 30 AD3 GLU B 268 GLU B 273 1 6 SHEET 1 AA111 THR A 176 TYR A 181 0 SHEET 2 AA111 LEU A 164 TYR A 171 -1 N ASP A 169 O LYS A 177 SHEET 3 AA111 ARG A 127 ILE A 134 -1 N ALA A 128 O PHE A 170 SHEET 4 AA111 VAL A 110 ASP A 118 -1 N ALA A 112 O ALA A 133 SHEET 5 AA111 VAL A 56 PHE A 66 -1 N LEU A 64 O LEU A 115 SHEET 6 AA111 TYR A 44 ILE A 53 -1 N LYS A 51 O SER A 58 SHEET 7 AA111 THR A 278 TYR A 283 -1 O ILE A 279 N ILE A 52 SHEET 8 AA111 ILE A 263 ILE A 267 -1 N THR A 265 O ASN A 280 SHEET 9 AA111 TYR A 226 PRO A 233 -1 N PHE A 231 O VAL A 264 SHEET 10 AA111 CYS A 213 GLU A 221 -1 N TYR A 217 O HIS A 230 SHEET 11 AA111 HIS A 183 PHE A 184 -1 N PHE A 184 O LEU A 216 SHEET 1 AA211 THR B 176 TYR B 181 0 SHEET 2 AA211 LEU B 164 TYR B 171 -1 N ASP B 169 O LYS B 177 SHEET 3 AA211 ARG B 127 ILE B 134 -1 N ALA B 128 O PHE B 170 SHEET 4 AA211 VAL B 110 ASP B 118 -1 N LYS B 111 O ALA B 133 SHEET 5 AA211 VAL B 56 PHE B 66 -1 N LEU B 64 O LEU B 115 SHEET 6 AA211 TYR B 44 ILE B 53 -1 N PHE B 45 O LEU B 65 SHEET 7 AA211 THR B 278 TYR B 283 -1 O TYR B 283 N CYS B 48 SHEET 8 AA211 ILE B 263 ILE B 267 -1 N THR B 265 O ASN B 280 SHEET 9 AA211 TYR B 226 PRO B 233 -1 N LEU B 229 O LEU B 266 SHEET 10 AA211 CYS B 213 GLU B 221 -1 N TYR B 217 O HIS B 230 SHEET 11 AA211 HIS B 183 TYR B 185 -1 N PHE B 184 O LEU B 216 CRYST1 73.173 76.106 114.216 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013666 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013140 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008755 0.00000 CONECT 4645 4646 4647 4648 4649 CONECT 4646 4645 CONECT 4647 4645 CONECT 4648 4645 CONECT 4649 4645 4650 CONECT 4650 4649 4651 4652 4653 CONECT 4651 4650 CONECT 4652 4650 CONECT 4653 4650 4654 CONECT 4654 4653 4655 CONECT 4655 4654 4656 CONECT 4656 4655 4657 4658 CONECT 4657 4656 CONECT 4658 4656 4659 CONECT 4659 4658 4660 CONECT 4660 4659 4661 CONECT 4661 4660 4662 4663 CONECT 4662 4661 CONECT 4663 4661 CONECT 4664 4665 4666 4667 4668 CONECT 4665 4664 CONECT 4666 4664 CONECT 4667 4664 CONECT 4668 4664 4669 CONECT 4669 4668 4670 4671 4672 CONECT 4670 4669 CONECT 4671 4669 CONECT 4672 4669 4673 CONECT 4673 4672 4674 CONECT 4674 4673 4675 CONECT 4675 4674 4676 4677 CONECT 4676 4675 CONECT 4677 4675 4678 CONECT 4678 4677 4679 CONECT 4679 4678 4680 CONECT 4680 4679 4681 4682 CONECT 4681 4680 CONECT 4682 4680 MASTER 408 0 2 30 22 0 0 6 5208 2 38 44 END