HEADER VIRAL PROTEIN 24-JUL-25 9W0E TITLE CRYOEM STRUCTURE OF B-PARTICLE IN EV-D68:MFSD6-L3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: P1D,VIRION PROTEIN 1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: P1B,VIRION PROTEIN 2; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: P1; COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: CAPSID PROTEIN VP4; COMPND 17 CHAIN: D; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 6; COMPND 21 CHAIN: E; COMPND 22 SYNONYM: MACROPHAGE MHC CLASS I RECEPTOR 2 HOMOLOG; COMPND 23 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROVIRUS D68; SOURCE 3 ORGANISM_TAXID: 42789; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: ENTEROVIRUS D68; SOURCE 8 ORGANISM_TAXID: 42789; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: ENTEROVIRUS D68; SOURCE 13 ORGANISM_TAXID: 42789; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: ENTEROVIRUS D68; SOURCE 18 ORGANISM_TAXID: 42789; SOURCE 19 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 21 MOL_ID: 5; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: HUMAN; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 GENE: MFSD6, MMR2; SOURCE 26 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS EV-D68, B-PARTICLE, MFSD6, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR S.J.LIANG,Z.Y.LOU REVDAT 1 29-JUL-26 9W0E 0 JRNL AUTH S.J.LIANG,Z.Y.LOU JRNL TITL CRYOEM STRUCTURE OF B-PARTICLE IN EV-D68:MFSD6-L3 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, PHENIX, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.930 REMARK 3 NUMBER OF PARTICLES : 10719 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9W0E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 26-JUL-25. REMARK 100 THE DEPOSITION ID IS D_1300061906. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ENTEROVIRUS D68 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 ILE A 4 REMARK 465 ILE A 5 REMARK 465 LYS A 6 REMARK 465 THR A 7 REMARK 465 ALA A 8 REMARK 465 THR A 9 REMARK 465 ASP A 10 REMARK 465 THR A 11 REMARK 465 VAL A 12 REMARK 465 LYS A 13 REMARK 465 SER A 14 REMARK 465 GLU A 15 REMARK 465 ILE A 16 REMARK 465 ASN A 17 REMARK 465 ALA A 18 REMARK 465 GLU A 19 REMARK 465 LEU A 20 REMARK 465 GLY A 21 REMARK 465 VAL A 22 REMARK 465 VAL A 23 REMARK 465 PRO A 24 REMARK 465 SER A 25 REMARK 465 LEU A 26 REMARK 465 ASN A 27 REMARK 465 ALA A 28 REMARK 465 VAL A 29 REMARK 465 GLU A 30 REMARK 465 THR A 31 REMARK 465 GLY A 32 REMARK 465 ALA A 33 REMARK 465 THR A 34 REMARK 465 SER A 35 REMARK 465 ASN A 36 REMARK 465 THR A 37 REMARK 465 GLU A 38 REMARK 465 PRO A 39 REMARK 465 GLU A 40 REMARK 465 GLU A 41 REMARK 465 ALA A 42 REMARK 465 ILE A 43 REMARK 465 GLN A 44 REMARK 465 THR A 45 REMARK 465 ARG A 46 REMARK 465 THR A 47 REMARK 465 VAL A 48 REMARK 465 ILE A 49 REMARK 465 ASN A 50 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 CYS B 7 REMARK 465 GLY B 8 REMARK 465 TYR B 9 REMARK 465 SER B 10 REMARK 465 ASP B 11 REMARK 465 ARG B 12 REMARK 465 VAL B 13 REMARK 465 GLN B 248 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 ALA D 3 REMARK 465 GLN D 4 REMARK 465 VAL D 5 REMARK 465 THR D 6 REMARK 465 ARG D 7 REMARK 465 GLN D 8 REMARK 465 GLN D 9 REMARK 465 THR D 10 REMARK 465 GLY D 11 REMARK 465 THR D 12 REMARK 465 HIS D 13 REMARK 465 GLU D 14 REMARK 465 ASN D 15 REMARK 465 ALA D 16 REMARK 465 ASN D 17 REMARK 465 ILE D 18 REMARK 465 ALA D 19 REMARK 465 THR D 20 REMARK 465 ASN D 21 REMARK 465 GLY D 22 REMARK 465 SER D 23 REMARK 465 HIS D 24 REMARK 465 ILE D 25 REMARK 465 THR D 26 REMARK 465 TYR D 27 REMARK 465 ASN D 28 REMARK 465 GLN D 29 REMARK 465 ASP D 45 REMARK 465 PHE D 46 REMARK 465 SER D 47 REMARK 465 GLN D 48 REMARK 465 ASP D 49 REMARK 465 PRO D 50 REMARK 465 SER D 51 REMARK 465 LYS D 52 REMARK 465 PHE D 53 REMARK 465 THR D 54 REMARK 465 GLU D 55 REMARK 465 PRO D 56 REMARK 465 VAL D 57 REMARK 465 VAL D 58 REMARK 465 GLU D 59 REMARK 465 GLY D 60 REMARK 465 LEU D 61 REMARK 465 LYS D 62 REMARK 465 ALA D 63 REMARK 465 GLY D 64 REMARK 465 ALA D 65 REMARK 465 PRO D 66 REMARK 465 VAL D 67 REMARK 465 LEU D 68 REMARK 465 LYS D 69 REMARK 465 LYS E 153 REMARK 465 PRO E 154 REMARK 465 ALA E 155 REMARK 465 THR E 156 REMARK 465 LEU E 157 REMARK 465 ARG E 158 REMARK 465 CYS E 159 REMARK 465 VAL E 160 REMARK 465 PRO E 161 REMARK 465 LYS E 162 REMARK 465 ILE E 163 REMARK 465 ARG E 164 REMARK 465 PRO E 165 REMARK 465 THR E 166 REMARK 465 THR E 167 REMARK 465 HIS E 168 REMARK 465 PRO E 169 REMARK 465 THR E 170 REMARK 465 ASN E 171 REMARK 465 ALA E 172 REMARK 465 SER E 173 REMARK 465 HIS E 174 REMARK 465 GLN E 175 REMARK 465 LEU E 176 REMARK 465 THR E 177 REMARK 465 ILE E 178 REMARK 465 LEU E 179 REMARK 465 PRO E 180 REMARK 465 THR E 181 REMARK 465 ASN E 182 REMARK 465 SER E 183 REMARK 465 SER E 184 REMARK 465 PHE E 185 REMARK 465 THR E 186 REMARK 465 SER E 187 REMARK 465 PHE E 188 REMARK 465 LEU E 189 REMARK 465 THR E 190 REMARK 465 ILE E 191 REMARK 465 SER E 192 REMARK 465 PRO E 193 REMARK 465 LYS E 194 REMARK 465 MET E 195 REMARK 465 ARG E 196 REMARK 465 GLU E 197 REMARK 465 LYS E 198 REMARK 465 ARG E 199 REMARK 465 SER E 209 REMARK 465 ASP E 210 REMARK 465 THR E 211 REMARK 465 VAL E 212 REMARK 465 THR E 213 REMARK 465 LEU E 214 REMARK 465 PRO E 215 REMARK 465 THR E 216 REMARK 465 ALA E 217 REMARK 465 PRO E 218 REMARK 465 ASN E 219 REMARK 465 MET E 220 REMARK 465 ASN E 221 REMARK 465 SER E 222 REMARK 465 GLU E 223 REMARK 465 PRO E 224 REMARK 465 THR E 225 REMARK 465 LEU E 226 REMARK 465 GLN E 227 REMARK 465 PRO E 228 REMARK 465 GLN E 229 REMARK 465 THR E 230 REMARK 465 GLY E 231 REMARK 465 GLU E 232 REMARK 465 ILE E 233 REMARK 465 THR E 234 REMARK 465 ASN E 235 REMARK 465 ARG E 236 REMARK 465 MET E 237 REMARK 465 MET E 238 REMARK 465 ASP E 239 REMARK 465 LEU E 240 REMARK 465 THR E 241 REMARK 465 LEU E 242 REMARK 465 ASN E 243 REMARK 465 SER E 244 REMARK 465 SER E 245 REMARK 465 THR E 246 REMARK 465 ALA E 247 REMARK 465 THR E 248 REMARK 465 PRO E 249 REMARK 465 VAL E 250 REMARK 465 SER E 251 REMARK 465 PRO E 252 REMARK 465 GLY E 253 REMARK 465 SER E 254 REMARK 465 VAL E 255 REMARK 465 THR E 256 REMARK 465 LYS E 257 REMARK 465 GLU E 258 REMARK 465 THR E 259 REMARK 465 THR E 260 REMARK 465 THR E 261 REMARK 465 VAL E 262 REMARK 465 ILE E 263 REMARK 465 VAL E 264 REMARK 465 THR E 265 REMARK 465 THR E 266 REMARK 465 THR E 267 REMARK 465 LYS E 268 REMARK 465 SER E 269 REMARK 465 LEU E 270 REMARK 465 PRO E 271 REMARK 465 SER E 272 REMARK 465 ASP E 273 REMARK 465 GLN E 274 REMARK 465 VAL E 275 REMARK 465 MET E 276 REMARK 465 LEU E 277 REMARK 465 VAL E 278 REMARK 465 TYR E 279 REMARK 465 ASP E 280 REMARK 465 GLN E 281 REMARK 465 GLN E 282 REMARK 465 GLU E 283 REMARK 465 VAL E 284 REMARK 465 GLU E 285 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 79 34.07 -96.84 REMARK 500 ASN A 89 13.45 59.86 REMARK 500 ASN A 130 52.61 38.64 REMARK 500 ASP A 159 30.26 -96.39 REMARK 500 ALA A 250 76.90 53.41 REMARK 500 GLN B 26 -9.49 72.01 REMARK 500 GLU B 57 -7.76 69.40 REMARK 500 ASP B 163 16.76 -141.95 REMARK 500 ARG E 205 18.59 53.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG F 1 REMARK 610 GAL G 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-65503 RELATED DB: EMDB REMARK 900 CRYOEM STRUCTURE OF B-PARTICLE IN EV-D68:MFSD6-EC2 DBREF 9W0E A 1 296 UNP Q68T42 POLG_HED68 565 860 DBREF 9W0E B 1 248 UNP Q68T42 POLG_HED68 70 317 DBREF 9W0E C 1 247 UNP Q68T42 POLG_HED68 318 564 DBREF 9W0E D 1 69 UNP Q68T42 POLG_HED68 1 69 DBREF 9W0E E 153 285 UNP Q6ZSS7 MFSD6_HUMAN 153 285 SEQRES 1 A 296 VAL GLU SER ILE ILE LYS THR ALA THR ASP THR VAL LYS SEQRES 2 A 296 SER GLU ILE ASN ALA GLU LEU GLY VAL VAL PRO SER LEU SEQRES 3 A 296 ASN ALA VAL GLU THR GLY ALA THR SER ASN THR GLU PRO SEQRES 4 A 296 GLU GLU ALA ILE GLN THR ARG THR VAL ILE ASN GLN HIS SEQRES 5 A 296 GLY VAL SER GLU THR LEU VAL GLU ASN PHE LEU GLY ARG SEQRES 6 A 296 ALA ALA LEU VAL SER LYS LYS SER PHE GLU TYR LYS ASN SEQRES 7 A 296 HIS ALA SER SER SER ALA GLY THR HIS LYS ASN PHE PHE SEQRES 8 A 296 LYS TRP THR ILE ASN THR LYS SER PHE VAL GLN LEU ARG SEQRES 9 A 296 ARG LYS LEU GLU LEU PHE THR TYR LEU ARG PHE ASP ALA SEQRES 10 A 296 GLU ILE THR ILE LEU THR THR VAL ALA VAL ASN GLY ASN SEQRES 11 A 296 ASN ASP SER THR TYR MET GLY LEU PRO ASP LEU THR LEU SEQRES 12 A 296 GLN ALA MET PHE VAL PRO THR GLY ALA LEU THR PRO LYS SEQRES 13 A 296 GLU GLN ASP SER PHE HIS TRP GLN SER GLY SER ASN ALA SEQRES 14 A 296 SER VAL PHE PHE LYS ILE SER ASP PRO PRO ALA ARG MET SEQRES 15 A 296 THR ILE PRO PHE MET CYS ILE ASN SER ALA TYR SER VAL SEQRES 16 A 296 PHE TYR ASP GLY PHE ALA GLY PHE GLU LYS ASN GLY LEU SEQRES 17 A 296 TYR GLY ILE ASN PRO ALA ASP THR ILE GLY ASN LEU CYS SEQRES 18 A 296 VAL ARG ILE VAL ASN GLU HIS GLN PRO VAL GLY PHE THR SEQRES 19 A 296 VAL THR VAL ARG VAL TYR MET LYS PRO LYS HIS ILE LYS SEQRES 20 A 296 ALA TRP ALA PRO ARG PRO PRO ARG THR MET PRO TYR MET SEQRES 21 A 296 SER ILE ALA ASN ALA ASN TYR LYS GLY ARG ASP THR ALA SEQRES 22 A 296 PRO ASN THR LEU ASN ALA ILE ILE GLY ASN ARG ALA SER SEQRES 23 A 296 VAL THR THR MET PRO HIS ASN ILE VAL THR SEQRES 1 B 248 SER PRO SER ALA GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 B 248 LEU GLN LEU LYS LEU GLY ASN SER ALA ILE VAL THR GLN SEQRES 3 B 248 GLU ALA ALA ASN TYR CYS CYS ALA TYR GLY GLU TRP PRO SEQRES 4 B 248 ASN TYR LEU PRO ASP HIS GLU ALA VAL ALA ILE ASP LYS SEQRES 5 B 248 PRO THR GLN PRO GLU THR SER THR ASP ARG PHE TYR THR SEQRES 6 B 248 LEU ARG SER VAL LYS TRP GLU SER ASN SER THR GLY TRP SEQRES 7 B 248 TRP TRP LYS LEU PRO ASP ALA LEU ASN ASN ILE GLY MET SEQRES 8 B 248 PHE GLY GLN ASN VAL GLN TYR HIS TYR LEU TYR ARG SER SEQRES 9 B 248 GLY PHE LEU ILE HIS VAL GLN CYS ASN ALA THR LYS PHE SEQRES 10 B 248 HIS GLN GLY ALA LEU LEU VAL VAL ALA ILE PRO GLU HIS SEQRES 11 B 248 GLN ARG GLY ALA HIS ASP THR THR THR SER PRO GLY PHE SEQRES 12 B 248 ASN ASP ILE MET LYS GLY GLU ARG GLY GLY THR PHE ASN SEQRES 13 B 248 HIS PRO TYR VAL LEU ASP ASP GLY THR SER ILE ALA CYS SEQRES 14 B 248 ALA THR ILE PHE PRO HIS GLN TRP ILE ASN LEU ARG THR SEQRES 15 B 248 ASN ASN SER ALA THR ILE VAL LEU PRO TRP MET ASN VAL SEQRES 16 B 248 ALA PRO MET ASP PHE PRO LEU ARG HIS ASN GLN TRP THR SEQRES 17 B 248 LEU ALA VAL ILE PRO VAL VAL PRO LEU GLY THR ARG THR SEQRES 18 B 248 MET SER SER VAL VAL PRO ILE THR VAL SER ILE ALA PRO SEQRES 19 B 248 MET CYS CYS GLU PHE ASN GLY LEU ARG HIS ALA ILE THR SEQRES 20 B 248 GLN SEQRES 1 C 247 GLY VAL PRO THR TYR LEU LEU PRO GLY SER GLY GLN PHE SEQRES 2 C 247 LEU THR THR ASP ASP HIS SER SER ALA PRO VAL LEU PRO SEQRES 3 C 247 CYS PHE ASN PRO THR PRO GLU MET HIS ILE PRO GLY GLN SEQRES 4 C 247 ILE ARG ASN MET LEU GLU MET ILE GLN VAL GLU SER MET SEQRES 5 C 247 MET GLU ILE ASN ASN THR ASP GLY ALA ASN GLY MET GLU SEQRES 6 C 247 ARG LEU ARG VAL ASP ILE SER VAL GLN ALA ASP LEU ASP SEQRES 7 C 247 GLN LEU LEU PHE ASN ILE PRO LEU ASP ILE GLN LEU ASP SEQRES 8 C 247 GLY PRO LEU ARG ASN THR LEU VAL GLY ASN ILE SER ARG SEQRES 9 C 247 TYR TYR THR HIS TRP SER GLY SER LEU GLU MET THR PHE SEQRES 10 C 247 MET PHE CYS GLY SER PHE MET ALA THR GLY LYS LEU ILE SEQRES 11 C 247 LEU CYS TYR THR PRO PRO GLY GLY SER CYS PRO THR THR SEQRES 12 C 247 ARG GLU THR ALA MET LEU GLY THR HIS ILE VAL TRP ASP SEQRES 13 C 247 PHE GLY LEU GLN SER SER ILE THR LEU ILE ILE PRO TRP SEQRES 14 C 247 ILE SER GLY SER HIS TYR ARG MET PHE ASN SER ASP ALA SEQRES 15 C 247 LYS SER THR ASN ALA ASN VAL GLY TYR VAL THR CYS PHE SEQRES 16 C 247 MET GLN THR ASN LEU ILE VAL PRO SER GLU SER SER ASP SEQRES 17 C 247 THR CYS SER LEU ILE GLY PHE ILE ALA ALA LYS ASP ASP SEQRES 18 C 247 PHE SER LEU ARG LEU MET ARG ASP SER PRO ASP ILE GLY SEQRES 19 C 247 GLN SER ASN HIS LEU HIS GLY ALA GLU ALA ALA TYR GLN SEQRES 1 D 69 MET GLY ALA GLN VAL THR ARG GLN GLN THR GLY THR HIS SEQRES 2 D 69 GLU ASN ALA ASN ILE ALA THR ASN GLY SER HIS ILE THR SEQRES 3 D 69 TYR ASN GLN ILE ASN PHE TYR LYS ASP SER TYR ALA ALA SEQRES 4 D 69 SER ALA SER LYS GLN ASP PHE SER GLN ASP PRO SER LYS SEQRES 5 D 69 PHE THR GLU PRO VAL VAL GLU GLY LEU LYS ALA GLY ALA SEQRES 6 D 69 PRO VAL LEU LYS SEQRES 1 E 133 LYS PRO ALA THR LEU ARG CYS VAL PRO LYS ILE ARG PRO SEQRES 2 E 133 THR THR HIS PRO THR ASN ALA SER HIS GLN LEU THR ILE SEQRES 3 E 133 LEU PRO THR ASN SER SER PHE THR SER PHE LEU THR ILE SEQRES 4 E 133 SER PRO LYS MET ARG GLU LYS ARG ASN LEU LEU GLU THR SEQRES 5 E 133 ARG LEU ASN VAL SER ASP THR VAL THR LEU PRO THR ALA SEQRES 6 E 133 PRO ASN MET ASN SER GLU PRO THR LEU GLN PRO GLN THR SEQRES 7 E 133 GLY GLU ILE THR ASN ARG MET MET ASP LEU THR LEU ASN SEQRES 8 E 133 SER SER THR ALA THR PRO VAL SER PRO GLY SER VAL THR SEQRES 9 E 133 LYS GLU THR THR THR VAL ILE VAL THR THR THR LYS SER SEQRES 10 E 133 LEU PRO SER ASP GLN VAL MET LEU VAL TYR ASP GLN GLN SEQRES 11 E 133 GLU VAL GLU HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET FUC F 6 10 HET GAL G 1 11 HET SIA G 2 20 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID FORMUL 6 NAG 2(C8 H15 N O6) FORMUL 6 BMA C6 H12 O6 FORMUL 6 MAN 2(C6 H12 O6) FORMUL 6 FUC C6 H12 O5 FORMUL 7 GAL C6 H12 O6 FORMUL 7 SIA C11 H19 N O9 HELIX 1 AA1 LEU A 58 GLY A 64 1 7 HELIX 2 AA2 PHE A 100 GLU A 108 1 9 HELIX 3 AA3 SER A 160 SER A 165 5 6 HELIX 4 AA4 ASN A 212 THR A 216 5 5 HELIX 5 AA5 CYS B 33 GLU B 37 5 5 HELIX 6 AA6 ILE B 89 TYR B 98 1 10 HELIX 7 AA7 GLY B 142 MET B 147 1 6 HELIX 8 AA8 HIS B 157 LEU B 161 5 5 HELIX 9 AA9 CYS B 169 PHE B 173 5 5 HELIX 10 AB1 MET C 43 GLN C 48 1 6 HELIX 11 AB2 ASN C 62 ARG C 66 5 5 HELIX 12 AB3 THR C 97 ARG C 104 1 8 HELIX 13 AB4 THR C 143 MET C 148 1 6 HELIX 14 AB5 GLU C 243 GLN C 247 5 5 HELIX 15 AB6 ASP D 35 ALA D 39 5 5 HELIX 16 AB7 LEU E 201 ARG E 205 1 5 SHEET 1 AA1 4 ALA A 67 TYR A 76 0 SHEET 2 AA1 4 PHE A 233 MET A 241 -1 O VAL A 239 N VAL A 69 SHEET 3 AA1 4 PHE A 110 VAL A 127 -1 N LEU A 122 O ARG A 238 SHEET 4 AA1 4 TYR A 193 SER A 194 -1 O TYR A 193 N LEU A 113 SHEET 1 AA2 4 ALA A 180 ILE A 184 0 SHEET 2 AA2 4 PHE A 110 VAL A 127 -1 N ALA A 117 O ILE A 184 SHEET 3 AA2 4 LYS A 244 PRO A 251 -1 O LYS A 244 N ASP A 116 SHEET 4 AA2 4 GLN C 39 ILE C 40 -1 O ILE C 40 N ALA A 248 SHEET 1 AA3 4 PHE A 90 THR A 94 0 SHEET 2 AA3 4 ASN A 219 ILE A 224 -1 O LEU A 220 N TRP A 93 SHEET 3 AA3 4 THR A 142 VAL A 148 -1 N MET A 146 O CYS A 221 SHEET 4 AA3 4 ALA A 169 LYS A 174 -1 O PHE A 173 N LEU A 143 SHEET 1 AA4 2 GLN B 15 LEU B 16 0 SHEET 2 AA4 2 ILE B 23 VAL B 24 -1 O ILE B 23 N LEU B 16 SHEET 1 AA5 4 TYR B 64 THR B 65 0 SHEET 2 AA5 4 VAL B 226 ILE B 232 -1 O ILE B 232 N TYR B 64 SHEET 3 AA5 4 HIS B 99 GLN B 111 -1 N GLN B 111 O THR B 229 SHEET 4 AA5 4 SER B 185 LEU B 190 -1 O ILE B 188 N ILE B 108 SHEET 1 AA6 4 VAL B 69 TRP B 71 0 SHEET 2 AA6 4 VAL B 226 ILE B 232 -1 O VAL B 226 N TRP B 71 SHEET 3 AA6 4 HIS B 99 GLN B 111 -1 N GLN B 111 O THR B 229 SHEET 4 AA6 4 MET B 235 LEU B 242 -1 O MET B 235 N GLY B 105 SHEET 1 AA7 5 GLY B 153 THR B 154 0 SHEET 2 AA7 5 TRP B 78 LEU B 82 -1 N TRP B 79 O GLY B 153 SHEET 3 AA7 5 TRP B 207 GLY B 218 -1 O VAL B 211 N TRP B 78 SHEET 4 AA7 5 GLN B 119 PRO B 128 -1 N LEU B 123 O ILE B 212 SHEET 5 AA7 5 HIS B 175 ASN B 179 -1 O ILE B 178 N LEU B 122 SHEET 1 AA8 3 SER C 51 MET C 53 0 SHEET 2 AA8 3 CYS C 210 ALA C 218 -1 O GLY C 214 N MET C 53 SHEET 3 AA8 3 ARG C 68 ILE C 71 -1 N VAL C 69 O LEU C 212 SHEET 1 AA9 4 SER C 51 MET C 53 0 SHEET 2 AA9 4 CYS C 210 ALA C 218 -1 O GLY C 214 N MET C 53 SHEET 3 AA9 4 LEU C 113 PHE C 119 -1 N GLU C 114 O ALA C 217 SHEET 4 AA9 4 SER C 162 ILE C 167 -1 O LEU C 165 N MET C 115 SHEET 1 AB1 4 LEU C 80 PRO C 85 0 SHEET 2 AB1 4 TYR C 191 ILE C 201 -1 O CYS C 194 N LEU C 81 SHEET 3 AB1 4 THR C 126 THR C 134 -1 N CYS C 132 O THR C 193 SHEET 4 AB1 4 THR C 151 ASP C 156 -1 O TRP C 155 N LEU C 129 SHEET 1 AB2 3 ARG C 176 MET C 177 0 SHEET 2 AB2 3 TYR C 106 SER C 110 -1 N TRP C 109 O ARG C 176 SHEET 3 AB2 3 SER C 223 MET C 227 -1 O ARG C 225 N HIS C 108 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O6 NAG F 1 C1 FUC F 6 1555 1555 1.45 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.45 LINK O6 BMA F 3 C1 MAN F 5 1555 1555 1.45 LINK O6 GAL G 1 C2 SIA G 2 1555 1555 1.44 CISPEP 1 ALA A 273 PRO A 274 0 1.83 CISPEP 2 LEU B 82 PRO B 83 0 2.88 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 5881 5882 5892 CONECT 5882 5881 5883 5889 CONECT 5883 5882 5884 5890 CONECT 5884 5883 5885 5891 CONECT 5885 5884 5886 5892 CONECT 5886 5885 5893 CONECT 5887 5888 5889 5894 CONECT 5888 5887 CONECT 5889 5882 5887 CONECT 5890 5883 CONECT 5891 5884 5895 CONECT 5892 5881 5885 CONECT 5893 5886 5942 CONECT 5894 5887 CONECT 5895 5891 5896 5906 CONECT 5896 5895 5897 5903 CONECT 5897 5896 5898 5904 CONECT 5898 5897 5899 5905 CONECT 5899 5898 5900 5906 CONECT 5900 5899 5907 CONECT 5901 5902 5903 5908 CONECT 5902 5901 CONECT 5903 5896 5901 CONECT 5904 5897 CONECT 5905 5898 5909 CONECT 5906 5895 5899 CONECT 5907 5900 CONECT 5908 5901 CONECT 5909 5905 5910 5918 CONECT 5910 5909 5911 5915 CONECT 5911 5910 5912 5916 CONECT 5912 5911 5913 5917 CONECT 5913 5912 5914 5918 CONECT 5914 5913 5919 CONECT 5915 5910 CONECT 5916 5911 5920 CONECT 5917 5912 CONECT 5918 5909 5913 CONECT 5919 5914 5931 CONECT 5920 5916 5921 5929 CONECT 5921 5920 5922 5926 CONECT 5922 5921 5923 5927 CONECT 5923 5922 5924 5928 CONECT 5924 5923 5925 5929 CONECT 5925 5924 5930 CONECT 5926 5921 CONECT 5927 5922 CONECT 5928 5923 CONECT 5929 5920 5924 CONECT 5930 5925 CONECT 5931 5919 5932 5940 CONECT 5932 5931 5933 5937 CONECT 5933 5932 5934 5938 CONECT 5934 5933 5935 5939 CONECT 5935 5934 5936 5940 CONECT 5936 5935 5941 CONECT 5937 5932 CONECT 5938 5933 CONECT 5939 5934 CONECT 5940 5931 5935 CONECT 5941 5936 CONECT 5942 5893 5943 5951 CONECT 5943 5942 5944 5948 CONECT 5944 5943 5945 5949 CONECT 5945 5944 5946 5950 CONECT 5946 5945 5947 5951 CONECT 5947 5946 CONECT 5948 5943 CONECT 5949 5944 CONECT 5950 5945 CONECT 5951 5942 5946 CONECT 5952 5953 5961 CONECT 5953 5952 5954 5958 CONECT 5954 5953 5955 5959 CONECT 5955 5954 5956 5960 CONECT 5956 5955 5957 5961 CONECT 5957 5956 5962 CONECT 5958 5953 CONECT 5959 5954 CONECT 5960 5955 CONECT 5961 5952 5956 CONECT 5962 5957 5964 CONECT 5963 5964 5975 5976 CONECT 5964 5962 5963 5965 5978 CONECT 5965 5964 5966 CONECT 5966 5965 5967 5977 CONECT 5967 5966 5968 5974 CONECT 5968 5967 5969 5978 CONECT 5969 5968 5970 5979 CONECT 5970 5969 5971 5980 CONECT 5971 5970 5981 CONECT 5972 5973 5974 5982 CONECT 5973 5972 CONECT 5974 5967 5972 CONECT 5975 5963 CONECT 5976 5963 CONECT 5977 5966 CONECT 5978 5964 5968 CONECT 5979 5969 CONECT 5980 5970 CONECT 5981 5971 CONECT 5982 5972 MASTER 382 0 8 16 41 0 0 6 5977 5 102 79 END