HEADER METAL BINDING PROTEIN 24-AUG-25 9WGJ TITLE STRUCTURAL AND FUNCTIONAL RELATIONSHIP OF CATECHOL-2,3-DIOXYGENASE TITLE 2 FROM GEOBACILLUS MAHADII GEO-05 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATECHOL 1,2-DIOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS MAHADIA; SOURCE 3 ORGANISM_TAXID: 1381941; SOURCE 4 GENE: ABH20_00085; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DIOXYGENASES, AROMATIC RING CLEAVAGE. METALLOPROTEIN, METAL BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.A.C.HUSAIN,H.JAMALUDDIN,M.A.JONET,K.R.ACHARYA,K.S.GREGORY, AUTHOR 2 W.M.K.W.SEMAN REVDAT 1 02-SEP-26 9WGJ 0 JRNL AUTH N.A.C.HUSAIN,H.JAMALUDDIN,M.A.JONET,K.R.ACHARYA,K.S.GREGORY, JRNL AUTH 2 W.M.K.W.SEMAN JRNL TITL STRUCTURAL AND FUNCTIONAL RELATIONSHIP OF JRNL TITL 2 CATECHOL-2,3-DIOXYGENASE FROM GEOBACILLUS MAHADII GEO-05 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 46220 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2410 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3380 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 172 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2462 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.14000 REMARK 3 B22 (A**2) : -1.35000 REMARK 3 B33 (A**2) : 0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.073 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.054 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.478 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2538 ; 0.013 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2288 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3443 ; 1.872 ; 1.829 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5271 ; 0.624 ; 1.764 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 303 ; 6.864 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 14 ; 6.491 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 408 ;12.144 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 362 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2998 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 608 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1218 ; 1.700 ; 1.645 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1218 ; 1.699 ; 1.644 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1519 ; 2.440 ; 2.939 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1520 ; 2.448 ; 2.942 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1320 ; 3.150 ; 2.012 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1320 ; 3.150 ; 2.015 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1925 ; 4.888 ; 3.520 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2927 ; 6.130 ;17.570 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2858 ; 6.075 ;16.760 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 9WGJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-AUG-25. REMARK 100 THE DEPOSITION ID IS D_1300062939. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95374 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48633 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 61.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.20 REMARK 200 R MERGE FOR SHELL (I) : 1.19100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M PCTP PH 9, 25% W/V PEG 1500, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.75350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.18600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 71.47300 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.75350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.18600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 71.47300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.75350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 34.18600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.47300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.75350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 34.18600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 71.47300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -339.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 68.37200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 68.37200 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 741 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 THR A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 6 REMARK 465 GLY A 102 REMARK 465 ASP A 103 REMARK 465 GLU A 104 REMARK 465 GLY A 105 REMARK 465 HIS A 106 REMARK 465 GLY A 107 REMARK 465 PRO A 318 REMARK 465 SER A 319 REMARK 465 ASN A 320 REMARK 465 ILE A 321 REMARK 465 LYS A 322 REMARK 465 PRO A 323 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 101 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 610 O HOH A 610 4565 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 297 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 43 -163.57 -120.45 REMARK 500 TYR A 124 -55.02 -122.16 REMARK 500 ASN A 256 -6.32 69.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 16 NE2 REMARK 620 2 HIS A 72 NE2 98.9 REMARK 620 3 GLU A 121 OE1 100.1 100.7 REMARK 620 4 HOH A 526 O 84.1 85.1 172.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 158 NE2 REMARK 620 2 HIS A 221 NE2 90.8 REMARK 620 3 GLU A 272 OE1 94.7 103.9 REMARK 620 4 HOH A 545 O 114.2 146.3 96.4 REMARK 620 N 1 2 3 DBREF1 9WGJ A 1 323 UNP A0A0J0VAX3_9BACL DBREF2 9WGJ A A0A0J0VAX3 1 323 SEQRES 1 A 323 MET THR THR THR LYS LYS LEU ASP PHE ASP ILE ALA HIS SEQRES 2 A 323 LEU GLY HIS VAL GLU LEU LEU THR PRO LYS PHE GLU GLU SEQRES 3 A 323 SER VAL HIS PHE PHE THR ASP ILE LEU GLY MET GLN GLU SEQRES 4 A 323 VAL TYR ARG ASN SER GLN SER ALA TYR LEU ARG CYS TRP SEQRES 5 A 323 GLY ASP TYR GLU GLU TYR SER LEU LYS LEU THR LYS ALA SEQRES 6 A 323 GLU HIS ALA GLY ILE GLY HIS THR ALA LEU ARG THR ILE SEQRES 7 A 323 SER LEU GLU ALA LEU GLU ARG LYS VAL HIS ALA ILE GLU SEQRES 8 A 323 GLU THR GLY GLN GLY ILE GLY TRP ILE ASP GLY ASP GLU SEQRES 9 A 323 GLY HIS GLY LYS ALA TYR ARG PHE TYR SER PRO ASP GLY SEQRES 10 A 323 HIS VAL MET GLU LEU TYR TYR GLU THR ASN PHE TYR GLU SEQRES 11 A 323 ALA PRO ASP HIS LEU LYS PRO TYR TRP LYS ASN GLN PRO SEQRES 12 A 323 GLN LYS PHE THR GLY HIS GLY ALA ALA VAL LYS THR LEU SEQRES 13 A 323 ASP HIS ILE ASN PHE LEU SER SER ASN PRO GLU LYS ASP SEQRES 14 A 323 GLY GLU PHE ALA GLU THR ILE LEU GLY LEU ARG LEU THR SEQRES 15 A 323 GLU GLN ILE VAL MET ASN ASP GLY ARG LYS THR GLY ILE SEQRES 16 A 323 TRP TYR ARG ALA THR ASN LYS SER TYR ASP ILE VAL TYR SEQRES 17 A 323 THR LYS ASP ALA THR GLY SER ARG GLY ARG LEU HIS HIS SEQRES 18 A 323 ILE ALA PHE ALA VAL GLU SER MET ALA ASP ILE VAL ARG SEQRES 19 A 323 ALA ALA ASN VAL PHE VAL ASP HIS GLY VAL TYR ILE GLU SEQRES 20 A 323 LEU SER PRO SER LYS HIS ALA ILE ASN GLN THR TYR THR SEQRES 21 A 323 THR TYR VAL TYR GLU PRO GLY GLY ASN ARG ILE GLU VAL SEQRES 22 A 323 CYS SER GLY GLY TYR LEU VAL LEU ALA PRO ASP TRP LYS SEQRES 23 A 323 PRO ILE THR TRP THR GLU GLU GLU ARG LYS ARG GLY GLN SEQRES 24 A 323 ALA TRP GLY ASN LYS THR VAL GLU THR PHE HIS THR TYR SEQRES 25 A 323 GLY THR PRO SER ILE PRO SER ASN ILE LYS PRO HET ZN A 401 1 HET ZN A 402 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) FORMUL 4 HOH *249(H2 O) HELIX 1 AA1 LYS A 23 ILE A 34 1 12 HELIX 2 AA2 SER A 79 GLU A 92 1 14 HELIX 3 AA3 PRO A 132 LYS A 136 5 5 HELIX 4 AA4 ASN A 165 ILE A 176 1 12 HELIX 5 AA5 SER A 228 HIS A 242 1 15 HELIX 6 AA6 ALA A 254 ASN A 256 5 3 HELIX 7 AA7 THR A 291 LYS A 296 1 6 HELIX 8 AA8 GLU A 307 TYR A 312 1 6 SHEET 1 AA1 8 GLN A 38 ARG A 42 0 SHEET 2 AA1 8 SER A 46 ARG A 50 -1 O TYR A 48 N VAL A 40 SHEET 3 AA1 8 LEU A 60 LYS A 64 -1 O LEU A 60 N LEU A 49 SHEET 4 AA1 8 ILE A 11 THR A 21 1 N LEU A 19 O THR A 63 SHEET 5 AA1 8 GLY A 69 THR A 77 -1 O GLY A 71 N GLU A 18 SHEET 6 AA1 8 VAL A 119 TYR A 123 1 O GLU A 121 N LEU A 75 SHEET 7 AA1 8 ALA A 109 TYR A 113 -1 N PHE A 112 O MET A 120 SHEET 8 AA1 8 GLY A 96 ILE A 100 -1 N GLY A 98 O ARG A 111 SHEET 1 AA2 9 ILE A 246 LYS A 252 0 SHEET 2 AA2 9 THR A 258 TYR A 264 -1 O THR A 260 N SER A 251 SHEET 3 AA2 9 ARG A 270 GLY A 276 -1 O ILE A 271 N VAL A 263 SHEET 4 AA2 9 LEU A 219 ALA A 225 1 N PHE A 224 O GLU A 272 SHEET 5 AA2 9 THR A 155 SER A 163 -1 N ASN A 160 O HIS A 221 SHEET 6 AA2 9 ILE A 206 LYS A 210 1 O VAL A 207 N PHE A 161 SHEET 7 AA2 9 LYS A 192 ARG A 198 -1 N TYR A 197 O ILE A 206 SHEET 8 AA2 9 ARG A 180 VAL A 186 -1 N THR A 182 O TRP A 196 SHEET 9 AA2 9 ILE A 288 TRP A 290 1 O TRP A 290 N GLN A 184 LINK NE2 HIS A 16 ZN ZN A 402 1555 1555 2.15 LINK NE2 HIS A 72 ZN ZN A 402 1555 1555 2.35 LINK OE1 GLU A 121 ZN ZN A 402 1555 1555 2.04 LINK NE2 HIS A 158 ZN ZN A 401 1555 1555 2.08 LINK NE2 HIS A 221 ZN ZN A 401 1555 1555 1.89 LINK OE1 GLU A 272 ZN ZN A 401 1555 1555 1.94 LINK ZN ZN A 401 O HOH A 545 1555 1555 1.80 LINK ZN ZN A 402 O HOH A 526 1555 1555 2.61 CISPEP 1 THR A 314 PRO A 315 0 0.51 CRYST1 61.507 68.372 142.946 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016258 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014626 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006996 0.00000 CONECT 80 2465 CONECT 541 2465 CONECT 881 2465 CONECT 1196 2464 CONECT 1702 2464 CONECT 2100 2464 CONECT 2464 1196 1702 2100 2510 CONECT 2465 80 541 881 2491 CONECT 2491 2465 CONECT 2510 2464 MASTER 384 0 2 8 17 0 0 6 2713 1 10 25 END