HEADER METAL BINDING PROTEIN 29-AUG-25 9WIO TITLE SOLUTION STRUCTURE OF SRCRDPEP MIMICKING SRCR DOMAIN CALCIUM-BINDING TITLE 2 SITES ON HYDROXYAPATITE SURFACE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLY-ASP-ASP-TYR-TRP-ASP-THR-ASN-ASP-GLY-SER-GLY-SER-GLY- COMPND 3 SER-ASP-ASP-VAL-ARG-GLY; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: CHEMICAL PRODUCTION METAGENOME; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 2495586 KEYWDS STRUCTURE FROM CYANA 3.98.15, METAL BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.FUTAGAWA,M.SUZUKI REVDAT 1 02-SEP-26 9WIO 0 JRNL AUTH K.FUTAGAWA,M.SUZUKI JRNL TITL CONFORMATIONAL ADAPTATION OF AN SRCRD-DERIVED PEPTIDE ON JRNL TITL 2 HYDROXYAPATITE SURFACES REVEALED BY SOLUTION NMR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9WIO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-AUG-25. REMARK 100 THE DEPOSITION ID IS D_1300063132. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 297 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 4 MM SRCRDPEP, 1 MM DSS, 10 % [U REMARK 210 -2H] D2O, 90 % H2O, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 1D 1H REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : ECA REMARK 210 SPECTROMETER MANUFACTURER : JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 118 90.75 62.47 REMARK 500 2 ASP A 109 -71.61 -61.92 REMARK 500 2 VAL A 118 79.09 62.27 REMARK 500 3 ASP A 103 101.70 -54.62 REMARK 500 3 SER A 111 140.57 -173.47 REMARK 500 3 VAL A 118 97.57 61.71 REMARK 500 4 ASP A 102 92.48 56.61 REMARK 500 4 SER A 113 44.54 -99.50 REMARK 500 4 ARG A 119 -72.29 -95.73 REMARK 500 5 ASP A 102 143.79 -170.83 REMARK 500 6 VAL A 118 109.89 -48.72 REMARK 500 7 ASN A 108 70.46 53.24 REMARK 500 7 ASP A 109 -65.54 -131.76 REMARK 500 9 ASP A 116 109.28 -58.44 REMARK 500 11 THR A 107 104.36 -52.75 REMARK 500 11 ASP A 109 -177.64 -61.15 REMARK 500 11 ASP A 117 -61.36 -109.08 REMARK 500 12 ASP A 102 94.50 57.89 REMARK 500 13 SER A 113 66.72 -118.08 REMARK 500 13 ASP A 117 98.88 -63.38 REMARK 500 14 ASP A 103 71.58 60.58 REMARK 500 14 SER A 113 79.38 52.76 REMARK 500 15 ASN A 108 -71.57 -102.18 REMARK 500 15 SER A 111 140.44 -179.08 REMARK 500 16 ASP A 102 85.11 55.91 REMARK 500 16 ARG A 119 -65.05 -103.23 REMARK 500 17 SER A 111 96.52 60.22 REMARK 500 19 ARG A 119 86.87 53.45 REMARK 500 20 ASP A 106 140.25 -170.13 REMARK 500 20 VAL A 118 107.60 -48.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36782 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF SRCRDPEP MIMICKING SRCR DOMAIN CALCIUM- REMARK 900 BINDING SITES ON HYDROXYAPATITE SURFACE DBREF 9WIO A 101 120 PDB 9WIO 9WIO 101 120 SEQRES 1 A 20 GLY ASP ASP TYR TRP ASP THR ASN ASP GLY SER GLY SER SEQRES 2 A 20 GLY SER ASP ASP VAL ARG GLY CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MODEL 11 ENDMDL MODEL 12 ENDMDL MODEL 13 ENDMDL MODEL 14 ENDMDL MODEL 15 ENDMDL MODEL 16 ENDMDL MODEL 17 ENDMDL MODEL 18 ENDMDL MODEL 19 ENDMDL MODEL 20 ENDMDL MASTER 120 0 0 0 0 0 0 6 145 1 0 2 END