HEADER REPLICATION/DNA 02-SEP-25 9WM0 TITLE ESCHERICHIA COLI RECG IN COMPLEX WITH A PARTIAL REPLICATION FORK COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT DNA HELICASE RECG; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA BRANCH MIGRATION PROTEIN RECG,PROBABLE DNA 3'-5' COMPND 5 HELICASE RECG; COMPND 6 EC: 5.6.2.4; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (28-MER); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (34-MER); COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: DNA (5'-D(P*CP*GP*AP*GP*CP*AP*C)-3'); COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 GENE: RECG, RADC, SPOV, B3652, JW3627; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: CHEMICAL PRODUCTION METAGENOME; SOURCE 10 ORGANISM_TAXID: 2495586; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: CHEMICAL PRODUCTION METAGENOME; SOURCE 14 ORGANISM_TAXID: 2495586; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: CHEMICAL PRODUCTION METAGENOME; SOURCE 18 ORGANISM_TAXID: 2495586 KEYWDS HELICASE, ATPASE, DNA REPAIR, REPLICATION/DNA, REPLICATION-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.CHENG REVDAT 1 09-SEP-26 9WM0 0 JRNL AUTH K.CHENG JRNL TITL STRUCTURAL INSIGHTS INTO DNA REPLICATION FORK REVERSAL BY JRNL TITL 2 RECG JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 101.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.500 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 71653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3540 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1101.0470 - 6.4300 1.00 2971 154 0.2201 0.2006 REMARK 3 2 6.4300 - 5.1000 1.00 2823 152 0.2374 0.2598 REMARK 3 3 5.1000 - 4.4600 1.00 2792 148 0.1935 0.1982 REMARK 3 4 4.4600 - 4.0500 1.00 2768 136 0.1979 0.1955 REMARK 3 5 4.0500 - 3.7600 1.00 2741 146 0.2133 0.2638 REMARK 3 6 3.7600 - 3.5400 1.00 2727 146 0.2257 0.2219 REMARK 3 7 3.5400 - 3.3600 1.00 2763 131 0.2275 0.2439 REMARK 3 8 3.3600 - 3.2200 1.00 2726 134 0.2267 0.2801 REMARK 3 9 3.2200 - 3.0900 1.00 2731 135 0.2444 0.2891 REMARK 3 10 3.0900 - 2.9800 1.00 2719 136 0.2568 0.2790 REMARK 3 11 2.9800 - 2.8900 1.00 2719 143 0.2638 0.2675 REMARK 3 12 2.8900 - 2.8100 1.00 2700 142 0.2721 0.2993 REMARK 3 13 2.8100 - 2.7300 1.00 2710 144 0.2595 0.2852 REMARK 3 14 2.7300 - 2.6700 1.00 2723 141 0.2477 0.2842 REMARK 3 15 2.6700 - 2.6100 1.00 2664 164 0.2484 0.2615 REMARK 3 16 2.6100 - 2.5500 1.00 2687 133 0.2458 0.2695 REMARK 3 17 2.5500 - 2.5000 1.00 2709 137 0.2465 0.2575 REMARK 3 18 2.5000 - 2.4500 1.00 2684 146 0.2449 0.2726 REMARK 3 19 2.4500 - 2.4100 1.00 2687 144 0.2432 0.3028 REMARK 3 20 2.4100 - 2.3700 1.00 2667 151 0.2458 0.2837 REMARK 3 21 2.3700 - 2.3300 1.00 2696 130 0.2363 0.2608 REMARK 3 22 2.3300 - 2.3000 1.00 2695 126 0.2372 0.2656 REMARK 3 23 2.3000 - 2.2600 1.00 2688 131 0.2418 0.2482 REMARK 3 24 2.2600 - 2.2300 1.00 2697 144 0.2514 0.3146 REMARK 3 25 2.2300 - 2.2000 0.98 2626 146 0.2544 0.3257 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.233 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.691 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7041 REMARK 3 ANGLE : 1.342 9841 REMARK 3 CHIRALITY : 0.137 1132 REMARK 3 PLANARITY : 0.010 1038 REMARK 3 DIHEDRAL : 19.947 2741 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 89.2332 -11.1073 10.7256 REMARK 3 T TENSOR REMARK 3 T11: 0.1529 T22: 0.1387 REMARK 3 T33: 0.1434 T12: 0.0172 REMARK 3 T13: 0.0151 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.0587 L22: 0.2904 REMARK 3 L33: 0.1067 L12: 0.0943 REMARK 3 L13: 0.0289 L23: -0.0661 REMARK 3 S TENSOR REMARK 3 S11: 0.0057 S12: -0.0111 S13: 0.0074 REMARK 3 S21: 0.0282 S22: -0.0042 S23: 0.0464 REMARK 3 S31: -0.0078 S32: 0.0069 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9WM0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 08-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1300063258. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-23 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97942 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71727 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.199 REMARK 200 RESOLUTION RANGE LOW (A) : 101.047 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL (PH=7.8), 4% POLY-GAMA REMARK 280 -GLUTAMIC ACID LOW MOLECULAR WEIGHT POLYMER, AND 28% PEG400, AND REMARK 280 28% PEG400, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 67.21400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 67.21400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.60650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 67.21400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 67.21400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 76.60650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 67.21400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.21400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 76.60650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 67.21400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.21400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 76.60650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 76430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -118.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 134.42800 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -134.42800 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 856 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1057 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1065 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT B 0 O5' REMARK 470 DG C 1 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 DG C 32 O HOH C 101 1.80 REMARK 500 O HOH B 125 O HOH C 109 1.81 REMARK 500 O HOH A 1031 O HOH A 1040 1.82 REMARK 500 O HOH A 757 O HOH A 1009 1.82 REMARK 500 O HOH A 902 O HOH A 913 1.84 REMARK 500 OG SER A 188 O HOH A 701 1.85 REMARK 500 OE2 GLU A 398 O HOH A 702 1.85 REMARK 500 O2 DC C 30 O HOH C 102 1.86 REMARK 500 O5' DG C 11 O HOH C 103 1.86 REMARK 500 O HOH A 1044 O HOH B 108 1.87 REMARK 500 NZ LYS A 260 O HOH A 703 1.88 REMARK 500 O HOH A 948 O HOH A 990 1.89 REMARK 500 N7 DG B 3 O HOH B 101 1.89 REMARK 500 O HOH D 105 O HOH D 107 1.90 REMARK 500 N GLY A 190 O HOH A 704 1.90 REMARK 500 O4' DG C 11 O HOH C 103 1.91 REMARK 500 O HOH A 1045 O HOH A 1066 1.91 REMARK 500 N3 DT B 27 O HOH B 102 1.91 REMARK 500 OP1 DC C 30 O HOH C 104 1.92 REMARK 500 O HOH A 918 O HOH A 1010 1.92 REMARK 500 OE2 GLU A 67 O HOH A 705 1.92 REMARK 500 SD MET A 291 O HOH A 1018 1.93 REMARK 500 NZ LYS A 532 O HOH A 706 1.94 REMARK 500 O HOH A 1017 O HOH B 139 1.94 REMARK 500 O PRO A 184 O HOH A 707 1.95 REMARK 500 O HOH A 717 O HOH A 787 1.95 REMARK 500 O HOH A 823 O HOH A 1019 1.98 REMARK 500 CE MET A 291 O HOH A 1018 1.98 REMARK 500 O HOH A 894 O HOH A 1030 1.99 REMARK 500 O6 DG C 32 O HOH C 105 2.00 REMARK 500 O HOH B 136 O HOH B 162 2.01 REMARK 500 C1' DC C 30 O HOH C 102 2.01 REMARK 500 N GLU A 497 O HOH A 708 2.01 REMARK 500 O HOH B 160 O HOH B 165 2.01 REMARK 500 O HOH A 784 O HOH A 974 2.02 REMARK 500 O3' DC C 29 O HOH C 104 2.02 REMARK 500 O2 DT C 2 O HOH C 106 2.03 REMARK 500 O HOH B 117 O HOH B 128 2.03 REMARK 500 OP1 DC C 21 O HOH C 107 2.05 REMARK 500 C1' DG C 11 O HOH C 103 2.05 REMARK 500 OE1 GLU A 554 O HOH A 709 2.06 REMARK 500 O ARG A 4 O HOH A 710 2.07 REMARK 500 O HOH B 148 O HOH B 159 2.08 REMARK 500 N3 DA B 6 O HOH B 103 2.08 REMARK 500 OP2 DC B 9 O HOH B 104 2.08 REMARK 500 O HOH A 718 O HOH A 1038 2.08 REMARK 500 C2' DG C 11 O HOH C 103 2.10 REMARK 500 O HOH A 907 O HOH B 155 2.10 REMARK 500 P DC C 30 O HOH C 104 2.12 REMARK 500 O5' DT B 27 O HOH B 105 2.12 REMARK 500 REMARK 500 THIS ENTRY HAS 56 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1021 O HOH A 1021 8665 1.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 5 52.71 -97.04 REMARK 500 LEU A 107 40.64 -108.73 REMARK 500 ASN A 254 89.75 -157.10 REMARK 500 THR A 378 -159.66 -94.40 REMARK 500 ALA A 441 -158.10 -141.71 REMARK 500 ASP A 449 50.13 -91.19 REMARK 500 LEU A 636 50.42 -117.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 484 0.10 SIDE CHAIN REMARK 500 ARG A 609 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1068 DISTANCE = 6.59 ANGSTROMS DBREF 9WM0 A 1 693 UNP P24230 RECG_ECOLI 1 693 DBREF 9WM0 B 0 27 PDB 9WM0 9WM0 0 27 DBREF 9WM0 C 1 34 PDB 9WM0 9WM0 1 34 DBREF 9WM0 D 1 7 PDB 9WM0 9WM0 1 7 SEQRES 1 A 693 MET LYS GLY ARG LEU LEU ASP ALA VAL PRO LEU SER SER SEQRES 2 A 693 LEU THR GLY VAL GLY ALA ALA LEU SER ASN LYS LEU ALA SEQRES 3 A 693 LYS ILE ASN LEU HIS THR VAL GLN ASP LEU LEU LEU HIS SEQRES 4 A 693 LEU PRO LEU ARG TYR GLU ASP ARG THR HIS LEU TYR PRO SEQRES 5 A 693 ILE GLY GLU LEU LEU PRO GLY VAL TYR ALA THR VAL GLU SEQRES 6 A 693 GLY GLU VAL LEU ASN CYS ASN ILE SER PHE GLY GLY ARG SEQRES 7 A 693 ARG MET MET THR CYS GLN ILE SER ASP GLY SER GLY ILE SEQRES 8 A 693 LEU THR MET ARG PHE PHE ASN PHE SER ALA ALA MET LYS SEQRES 9 A 693 ASN SER LEU ALA ALA GLY ARG ARG VAL LEU ALA TYR GLY SEQRES 10 A 693 GLU ALA LYS ARG GLY LYS TYR GLY ALA GLU MET ILE HIS SEQRES 11 A 693 PRO GLU TYR ARG VAL GLN GLY ASP LEU SER THR PRO GLU SEQRES 12 A 693 LEU GLN GLU THR LEU THR PRO VAL TYR PRO THR THR GLU SEQRES 13 A 693 GLY VAL LYS GLN ALA THR LEU ARG LYS LEU THR ASP GLN SEQRES 14 A 693 ALA LEU ASP LEU LEU ASP THR CYS ALA ILE GLU GLU LEU SEQRES 15 A 693 LEU PRO PRO GLU LEU SER GLN GLY MET MET THR LEU PRO SEQRES 16 A 693 GLU ALA LEU ARG THR LEU HIS ARG PRO PRO PRO THR LEU SEQRES 17 A 693 GLN LEU SER ASP LEU GLU THR GLY GLN HIS PRO ALA GLN SEQRES 18 A 693 ARG ARG LEU ILE LEU GLU GLU LEU LEU ALA HIS ASN LEU SEQRES 19 A 693 SER MET LEU ALA LEU ARG ALA GLY ALA GLN ARG PHE HIS SEQRES 20 A 693 ALA GLN PRO LEU SER ALA ASN ASP THR LEU LYS ASN LYS SEQRES 21 A 693 LEU LEU ALA ALA LEU PRO PHE LYS PRO THR GLY ALA GLN SEQRES 22 A 693 ALA ARG VAL VAL ALA GLU ILE GLU ARG ASP MET ALA LEU SEQRES 23 A 693 ASP VAL PRO MET MET ARG LEU VAL GLN GLY ASP VAL GLY SEQRES 24 A 693 SER GLY LYS THR LEU VAL ALA ALA LEU ALA ALA LEU ARG SEQRES 25 A 693 ALA ILE ALA HIS GLY LYS GLN VAL ALA LEU MET ALA PRO SEQRES 26 A 693 THR GLU LEU LEU ALA GLU GLN HIS ALA ASN ASN PHE ARG SEQRES 27 A 693 ASN TRP PHE ALA PRO LEU GLY ILE GLU VAL GLY TRP LEU SEQRES 28 A 693 ALA GLY LYS GLN LYS GLY LYS ALA ARG LEU ALA GLN GLN SEQRES 29 A 693 GLU ALA ILE ALA SER GLY GLN VAL GLN MET ILE VAL GLY SEQRES 30 A 693 THR HIS ALA ILE PHE GLN GLU GLN VAL GLN PHE ASN GLY SEQRES 31 A 693 LEU ALA LEU VAL ILE ILE ASP GLU GLN HIS ARG PHE GLY SEQRES 32 A 693 VAL HIS GLN ARG LEU ALA LEU TRP GLU LYS GLY GLN GLN SEQRES 33 A 693 GLN GLY PHE HIS PRO HIS GLN LEU ILE MET THR ALA THR SEQRES 34 A 693 PRO ILE PRO ARG THR LEU ALA MET THR ALA TYR ALA ASP SEQRES 35 A 693 LEU ASP THR SER VAL ILE ASP GLU LEU PRO PRO GLY ARG SEQRES 36 A 693 THR PRO VAL THR THR VAL ALA ILE PRO ASP THR ARG ARG SEQRES 37 A 693 THR ASP ILE ILE ASP ARG VAL HIS HIS ALA CYS ILE THR SEQRES 38 A 693 GLU GLY ARG GLN ALA TYR TRP VAL CYS THR LEU ILE GLU SEQRES 39 A 693 GLU SER GLU LEU LEU GLU ALA GLN ALA ALA GLU ALA THR SEQRES 40 A 693 TRP GLU GLU LEU LYS LEU ALA LEU PRO GLU LEU ASN VAL SEQRES 41 A 693 GLY LEU VAL HIS GLY ARG MET LYS PRO ALA GLU LYS GLN SEQRES 42 A 693 ALA VAL MET ALA SER PHE LYS GLN GLY GLU LEU HIS LEU SEQRES 43 A 693 LEU VAL ALA THR THR VAL ILE GLU VAL GLY VAL ASP VAL SEQRES 44 A 693 PRO ASN ALA SER LEU MET ILE ILE GLU ASN PRO GLU ARG SEQRES 45 A 693 LEU GLY LEU ALA GLN LEU HIS GLN LEU ARG GLY ARG VAL SEQRES 46 A 693 GLY ARG GLY ALA VAL ALA SER HIS CYS VAL LEU LEU TYR SEQRES 47 A 693 LYS THR PRO LEU SER LYS THR ALA GLN ILE ARG LEU GLN SEQRES 48 A 693 VAL LEU ARG ASP SER ASN ASP GLY PHE VAL ILE ALA GLN SEQRES 49 A 693 LYS ASP LEU GLU ILE ARG GLY PRO GLY GLU LEU LEU GLY SEQRES 50 A 693 THR ARG GLN THR GLY ASN ALA GLU PHE LYS VAL ALA ASP SEQRES 51 A 693 LEU LEU ARG ASP GLN ALA MET ILE PRO GLU VAL GLN ARG SEQRES 52 A 693 LEU ALA ARG HIS ILE HIS GLU ARG TYR PRO GLN GLN ALA SEQRES 53 A 693 LYS ALA LEU ILE GLU ARG TRP MET PRO GLU THR GLU ARG SEQRES 54 A 693 TYR SER ASN ALA SEQRES 1 B 28 DT DT DC DG DG DG DA DG DT DC DT DT DC SEQRES 2 B 28 DG DG DC DA DA DT DG DC DT DC DC DA DT SEQRES 3 B 28 DG DT SEQRES 1 C 34 DG DT DG DC DT DC DG DC DA DT DG DG DA SEQRES 2 C 34 DG DC DA DT DT DG DC DC DG DA DA DG DA SEQRES 3 C 34 DC DT DC DC DC DG DA DA SEQRES 1 D 7 DC DG DA DG DC DA DC FORMUL 5 HOH *495(H2 O) HELIX 1 AA1 PRO A 10 LEU A 14 5 5 HELIX 2 AA2 GLY A 18 LYS A 27 1 10 HELIX 3 AA3 THR A 32 LEU A 38 1 7 HELIX 4 AA4 PRO A 52 LEU A 56 5 5 HELIX 5 AA5 SER A 100 LEU A 107 1 8 HELIX 6 AA6 LYS A 159 THR A 176 1 18 HELIX 7 AA7 PRO A 184 GLN A 189 1 6 HELIX 8 AA8 THR A 193 ARG A 203 1 11 HELIX 9 AA9 LEU A 210 GLY A 216 1 7 HELIX 10 AB1 HIS A 218 LEU A 239 1 22 HELIX 11 AB2 ASP A 255 LEU A 265 1 11 HELIX 12 AB3 THR A 270 ALA A 285 1 16 HELIX 13 AB4 GLY A 301 ALA A 315 1 15 HELIX 14 AB5 THR A 326 ALA A 342 1 17 HELIX 15 AB6 PRO A 343 GLY A 345 5 3 HELIX 16 AB7 LYS A 356 SER A 369 1 14 HELIX 17 AB8 HIS A 379 GLN A 383 5 5 HELIX 18 AB9 GLU A 398 PHE A 402 5 5 HELIX 19 AC1 GLY A 403 GLY A 414 1 12 HELIX 20 AC2 ILE A 431 ALA A 441 1 11 HELIX 21 AC3 ARG A 467 THR A 481 1 15 HELIX 22 AC4 ALA A 503 LEU A 515 1 13 HELIX 23 AC5 LYS A 528 GLN A 541 1 14 HELIX 24 AC6 THR A 551 VAL A 555 5 5 HELIX 25 AC7 PRO A 570 LEU A 573 5 4 HELIX 26 AC8 GLY A 574 ARG A 584 1 11 HELIX 27 AC9 SER A 603 SER A 616 1 14 HELIX 28 AD1 ASP A 618 GLY A 631 1 14 HELIX 29 AD2 ASP A 654 ALA A 656 5 3 HELIX 30 AD3 MET A 657 TYR A 672 1 16 HELIX 31 AD4 TYR A 672 MET A 684 1 13 HELIX 32 AD5 THR A 687 ALA A 693 5 7 SHEET 1 AA1 2 ARG A 43 GLU A 45 0 SHEET 2 AA1 2 THR A 149 VAL A 151 -1 O THR A 149 N GLU A 45 SHEET 1 AA2 7 LYS A 120 ARG A 121 0 SHEET 2 AA2 7 ALA A 126 ILE A 129 -1 O GLU A 127 N LYS A 120 SHEET 3 AA2 7 ILE A 91 PHE A 96 1 N ARG A 95 O MET A 128 SHEET 4 AA2 7 MET A 80 SER A 86 -1 N CYS A 83 O MET A 94 SHEET 5 AA2 7 TYR A 61 SER A 74 -1 N ASN A 72 O THR A 82 SHEET 6 AA2 7 ARG A 112 GLU A 118 -1 O VAL A 113 N GLY A 66 SHEET 7 AA2 7 GLU A 132 GLN A 136 -1 O GLU A 132 N TYR A 116 SHEET 1 AA3 7 VAL A 348 LEU A 351 0 SHEET 2 AA3 7 MET A 374 GLY A 377 1 O MET A 374 N GLY A 349 SHEET 3 AA3 7 GLN A 319 MET A 323 1 N LEU A 322 O ILE A 375 SHEET 4 AA3 7 LEU A 391 ILE A 396 1 O ILE A 395 N ALA A 321 SHEET 5 AA3 7 HIS A 422 THR A 427 1 O MET A 426 N ILE A 396 SHEET 6 AA3 7 MET A 291 GLN A 295 1 N VAL A 294 O ILE A 425 SHEET 7 AA3 7 ASP A 444 VAL A 447 1 O ASP A 444 N LEU A 293 SHEET 1 AA4 6 VAL A 458 PRO A 464 0 SHEET 2 AA4 6 SER A 592 TYR A 598 1 O LEU A 596 N VAL A 461 SHEET 3 AA4 6 ALA A 562 GLU A 568 1 N ILE A 567 O VAL A 595 SHEET 4 AA4 6 GLN A 485 VAL A 489 1 N VAL A 489 O ILE A 566 SHEET 5 AA4 6 LEU A 546 ALA A 549 1 O ALA A 549 N TRP A 488 SHEET 6 AA4 6 VAL A 520 VAL A 523 1 N GLY A 521 O LEU A 546 CISPEP 1 THR A 600 PRO A 601 0 -0.70 CRYST1 134.428 134.428 153.213 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007439 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007439 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006527 0.00000 MASTER 403 0 0 32 22 0 0 6 7269 4 0 61 END