HEADER REPLICATION/DNA 02-SEP-25 9WM2 TITLE CRYSTAL STRUCTURE OF ESCHERICHIA COLI RECG IN COMPLEX WITH A PARTIAL TITLE 2 REPLICATION FORK AND ADPALF4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT DNA HELICASE RECG; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA BRANCH MIGRATION PROTEIN RECG,PROBABLE DNA 3'-5' COMPND 5 HELICASE RECG; COMPND 6 EC: 5.6.2.4; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'- COMPND 10 D(*GP*TP*CP*TP*TP*CP*GP*GP*CP*AP*AP*TP*GP*CP*TP*CP*CP*AP*TP*GP*TP*T)- COMPND 11 3'); COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: DNA (30-MER); COMPND 16 CHAIN: C; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 4; COMPND 19 MOLECULE: DNA (5'-D(*CP*GP*AP*GP*CP*AP*CP*TP*GP*C)-3'); COMPND 20 CHAIN: D; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 GENE: RECG, RADC, SPOV, B3652, JW3627; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: CHEMICAL PRODUCTION METAGENOME; SOURCE 10 ORGANISM_TAXID: 2495586; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: CHEMICAL PRODUCTION METAGENOME; SOURCE 14 ORGANISM_TAXID: 2495586; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: CHEMICAL PRODUCTION METAGENOME; SOURCE 18 ORGANISM_TAXID: 2495586 KEYWDS HELICASE, ATPASE, DNA REPAIR, REPLICATION/DNA, REPLICATION-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.CHENG REVDAT 1 09-SEP-26 9WM2 0 JRNL AUTH K.CHENG JRNL TITL STRUCTURAL INSIGHTS INTO DNA REPLICATION FORK REVERSAL BY JRNL TITL 2 RECG JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.520 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 30417 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1515 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.2700 - 6.6700 1.00 2798 158 0.1883 0.1860 REMARK 3 2 6.6600 - 5.2900 1.00 2689 145 0.2222 0.2358 REMARK 3 3 5.2900 - 4.6200 1.00 2648 139 0.1991 0.2072 REMARK 3 4 4.6200 - 4.2000 1.00 2644 131 0.1872 0.2054 REMARK 3 5 4.2000 - 3.9000 1.00 2600 143 0.2231 0.2303 REMARK 3 6 3.9000 - 3.6700 1.00 2630 138 0.2413 0.2620 REMARK 3 7 3.6700 - 3.4900 1.00 2575 131 0.2526 0.2881 REMARK 3 8 3.4900 - 3.3300 1.00 2621 126 0.2478 0.2476 REMARK 3 9 3.3300 - 3.2100 0.99 2594 131 0.2587 0.2649 REMARK 3 10 3.2100 - 3.0900 1.00 2556 142 0.2812 0.2723 REMARK 3 11 3.0900 - 3.0000 0.98 2547 131 0.3172 0.3452 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.376 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.608 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 6865 REMARK 3 ANGLE : 1.519 9579 REMARK 3 CHIRALITY : 0.125 1102 REMARK 3 PLANARITY : 0.016 1024 REMARK 3 DIHEDRAL : 20.918 2664 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 41.8894 6.1318 111.2093 REMARK 3 T TENSOR REMARK 3 T11: 0.3517 T22: 0.3821 REMARK 3 T33: 0.3214 T12: 0.0209 REMARK 3 T13: 0.0026 T23: 0.0322 REMARK 3 L TENSOR REMARK 3 L11: 0.4799 L22: 1.0269 REMARK 3 L33: 0.0817 L12: -0.4408 REMARK 3 L13: 0.0686 L23: -0.1530 REMARK 3 S TENSOR REMARK 3 S11: -0.0249 S12: -0.0536 S13: -0.0807 REMARK 3 S21: -0.0046 S22: 0.0642 S23: -0.0532 REMARK 3 S31: 0.0356 S32: -0.0195 S33: -0.0385 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9WM2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 19-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1300063260. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-23 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97943 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30509 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.998 REMARK 200 RESOLUTION RANGE LOW (A) : 110.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.50400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM FORMATE, 0.2 M MALIC ACID REMARK 280 (PH=7.0) AND 17% PEG3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.62500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.48000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.22600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.48000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.62500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 70.22600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 689 REMARK 465 TYR A 690 REMARK 465 SER A 691 REMARK 465 ASN A 692 REMARK 465 ALA A 693 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG B 7 O5' REMARK 470 DG C -2 O5' REMARK 470 DC D 1 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 255 NH2 ARG A 312 2.15 REMARK 500 O VAL A 298 NH2 ARG A 587 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 121 CG2 THR A 687 1655 1.80 REMARK 500 NZ LYS A 104 OE2 GLU A 509 3746 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 312 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 109 132.58 -39.53 REMARK 500 TYR A 124 16.68 59.26 REMARK 500 PHE A 246 -168.66 -123.14 REMARK 500 ASN A 254 68.99 -151.18 REMARK 500 ALA A 441 -167.23 -165.19 REMARK 500 ASP A 442 36.30 -97.24 REMARK 500 ILE A 493 -64.58 -92.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 240 0.20 SIDE CHAIN REMARK 500 ARG A 401 0.11 SIDE CHAIN REMARK 500 ARG A 468 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ALF A 802 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A 801 O2B REMARK 620 2 ALF A 802 F1 76.2 REMARK 620 3 ALF A 802 F2 102.8 178.7 REMARK 620 4 ALF A 802 F3 92.9 90.3 90.5 REMARK 620 5 ALF A 802 F4 87.0 89.2 89.9 179.6 REMARK 620 N 1 2 3 4 DBREF 9WM2 A 1 693 UNP P24230 RECG_ECOLI 1 693 DBREF 9WM2 B 7 28 PDB 9WM2 9WM2 7 28 DBREF 9WM2 C -2 27 PDB 9WM2 9WM2 -2 27 DBREF 9WM2 D 1 10 PDB 9WM2 9WM2 1 10 SEQRES 1 A 693 MET LYS GLY ARG LEU LEU ASP ALA VAL PRO LEU SER SER SEQRES 2 A 693 LEU THR GLY VAL GLY ALA ALA LEU SER ASN LYS LEU ALA SEQRES 3 A 693 LYS ILE ASN LEU HIS THR VAL GLN ASP LEU LEU LEU HIS SEQRES 4 A 693 LEU PRO LEU ARG TYR GLU ASP ARG THR HIS LEU TYR PRO SEQRES 5 A 693 ILE GLY GLU LEU LEU PRO GLY VAL TYR ALA THR VAL GLU SEQRES 6 A 693 GLY GLU VAL LEU ASN CYS ASN ILE SER PHE GLY GLY ARG SEQRES 7 A 693 ARG MET MET THR CYS GLN ILE SER ASP GLY SER GLY ILE SEQRES 8 A 693 LEU THR MET ARG PHE PHE ASN PHE SER ALA ALA MET LYS SEQRES 9 A 693 ASN SER LEU ALA ALA GLY ARG ARG VAL LEU ALA TYR GLY SEQRES 10 A 693 GLU ALA LYS ARG GLY LYS TYR GLY ALA GLU MET ILE HIS SEQRES 11 A 693 PRO GLU TYR ARG VAL GLN GLY ASP LEU SER THR PRO GLU SEQRES 12 A 693 LEU GLN GLU THR LEU THR PRO VAL TYR PRO THR THR GLU SEQRES 13 A 693 GLY VAL LYS GLN ALA THR LEU ARG LYS LEU THR ASP GLN SEQRES 14 A 693 ALA LEU ASP LEU LEU ASP THR CYS ALA ILE GLU GLU LEU SEQRES 15 A 693 LEU PRO PRO GLU LEU SER GLN GLY MET MET THR LEU PRO SEQRES 16 A 693 GLU ALA LEU ARG THR LEU HIS ARG PRO PRO PRO THR LEU SEQRES 17 A 693 GLN LEU SER ASP LEU GLU THR GLY GLN HIS PRO ALA GLN SEQRES 18 A 693 ARG ARG LEU ILE LEU GLU GLU LEU LEU ALA HIS ASN LEU SEQRES 19 A 693 SER MET LEU ALA LEU ARG ALA GLY ALA GLN ARG PHE HIS SEQRES 20 A 693 ALA GLN PRO LEU SER ALA ASN ASP THR LEU LYS ASN LYS SEQRES 21 A 693 LEU LEU ALA ALA LEU PRO PHE LYS PRO THR GLY ALA GLN SEQRES 22 A 693 ALA ARG VAL VAL ALA GLU ILE GLU ARG ASP MET ALA LEU SEQRES 23 A 693 ASP VAL PRO MET MET ARG LEU VAL GLN GLY ASP VAL GLY SEQRES 24 A 693 SER GLY LYS THR LEU VAL ALA ALA LEU ALA ALA LEU ARG SEQRES 25 A 693 ALA ILE ALA HIS GLY LYS GLN VAL ALA LEU MET ALA PRO SEQRES 26 A 693 THR GLU LEU LEU ALA GLU GLN HIS ALA ASN ASN PHE ARG SEQRES 27 A 693 ASN TRP PHE ALA PRO LEU GLY ILE GLU VAL GLY TRP LEU SEQRES 28 A 693 ALA GLY LYS GLN LYS GLY LYS ALA ARG LEU ALA GLN GLN SEQRES 29 A 693 GLU ALA ILE ALA SER GLY GLN VAL GLN MET ILE VAL GLY SEQRES 30 A 693 THR HIS ALA ILE PHE GLN GLU GLN VAL GLN PHE ASN GLY SEQRES 31 A 693 LEU ALA LEU VAL ILE ILE ASP GLU GLN HIS ARG PHE GLY SEQRES 32 A 693 VAL HIS GLN ARG LEU ALA LEU TRP GLU LYS GLY GLN GLN SEQRES 33 A 693 GLN GLY PHE HIS PRO HIS GLN LEU ILE MET THR ALA THR SEQRES 34 A 693 PRO ILE PRO ARG THR LEU ALA MET THR ALA TYR ALA ASP SEQRES 35 A 693 LEU ASP THR SER VAL ILE ASP GLU LEU PRO PRO GLY ARG SEQRES 36 A 693 THR PRO VAL THR THR VAL ALA ILE PRO ASP THR ARG ARG SEQRES 37 A 693 THR ASP ILE ILE ASP ARG VAL HIS HIS ALA CYS ILE THR SEQRES 38 A 693 GLU GLY ARG GLN ALA TYR TRP VAL CYS THR LEU ILE GLU SEQRES 39 A 693 GLU SER GLU LEU LEU GLU ALA GLN ALA ALA GLU ALA THR SEQRES 40 A 693 TRP GLU GLU LEU LYS LEU ALA LEU PRO GLU LEU ASN VAL SEQRES 41 A 693 GLY LEU VAL HIS GLY ARG MET LYS PRO ALA GLU LYS GLN SEQRES 42 A 693 ALA VAL MET ALA SER PHE LYS GLN GLY GLU LEU HIS LEU SEQRES 43 A 693 LEU VAL ALA THR THR VAL ILE GLU VAL GLY VAL ASP VAL SEQRES 44 A 693 PRO ASN ALA SER LEU MET ILE ILE GLU ASN PRO GLU ARG SEQRES 45 A 693 LEU GLY LEU ALA GLN LEU HIS GLN LEU ARG GLY ARG VAL SEQRES 46 A 693 GLY ARG GLY ALA VAL ALA SER HIS CYS VAL LEU LEU TYR SEQRES 47 A 693 LYS THR PRO LEU SER LYS THR ALA GLN ILE ARG LEU GLN SEQRES 48 A 693 VAL LEU ARG ASP SER ASN ASP GLY PHE VAL ILE ALA GLN SEQRES 49 A 693 LYS ASP LEU GLU ILE ARG GLY PRO GLY GLU LEU LEU GLY SEQRES 50 A 693 THR ARG GLN THR GLY ASN ALA GLU PHE LYS VAL ALA ASP SEQRES 51 A 693 LEU LEU ARG ASP GLN ALA MET ILE PRO GLU VAL GLN ARG SEQRES 52 A 693 LEU ALA ARG HIS ILE HIS GLU ARG TYR PRO GLN GLN ALA SEQRES 53 A 693 LYS ALA LEU ILE GLU ARG TRP MET PRO GLU THR GLU ARG SEQRES 54 A 693 TYR SER ASN ALA SEQRES 1 B 22 DG DT DC DT DT DC DG DG DC DA DA DT DG SEQRES 2 B 22 DC DT DC DC DA DT DG DT DT SEQRES 1 C 30 DG DC DA DG DT DG DC DT DC DG DC DA DT SEQRES 2 C 30 DG DG DA DG DC DA DT DT DG DC DC DG DA SEQRES 3 C 30 DA DG DA DC SEQRES 1 D 10 DC DG DA DG DC DA DC DT DG DC HET ADP A 801 27 HET ALF A 802 5 HET MG A 803 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM ALF TETRAFLUOROALUMINATE ION HETNAM MG MAGNESIUM ION FORMUL 5 ADP C10 H15 N5 O10 P2 FORMUL 6 ALF AL F4 1- FORMUL 7 MG MG 2+ HELIX 1 AA1 PRO A 10 LEU A 14 5 5 HELIX 2 AA2 GLY A 18 ILE A 28 1 11 HELIX 3 AA3 THR A 32 LEU A 38 1 7 HELIX 4 AA4 PRO A 52 LEU A 56 5 5 HELIX 5 AA5 SER A 100 LEU A 107 1 8 HELIX 6 AA6 LYS A 159 CYS A 177 1 19 HELIX 7 AA7 PRO A 184 GLN A 189 1 6 HELIX 8 AA8 THR A 193 ARG A 203 1 11 HELIX 9 AA9 HIS A 218 GLY A 242 1 25 HELIX 10 AB1 ASP A 255 LEU A 265 1 11 HELIX 11 AB2 GLY A 271 ALA A 285 1 15 HELIX 12 AB3 GLY A 301 ALA A 315 1 15 HELIX 13 AB4 THR A 326 ALA A 342 1 17 HELIX 14 AB5 GLY A 357 GLY A 370 1 14 HELIX 15 AB6 GLN A 399 PHE A 402 5 4 HELIX 16 AB7 GLY A 403 GLN A 416 1 14 HELIX 17 AB8 ILE A 431 ALA A 441 1 11 HELIX 18 AB9 ARG A 467 THR A 481 1 15 HELIX 19 AC1 ALA A 503 ALA A 514 1 12 HELIX 20 AC2 LYS A 528 GLN A 541 1 14 HELIX 21 AC3 THR A 551 GLU A 554 5 4 HELIX 22 AC4 PRO A 570 LEU A 573 5 4 HELIX 23 AC5 GLY A 574 GLY A 583 1 10 HELIX 24 AC6 SER A 603 SER A 616 1 14 HELIX 25 AC7 ASP A 618 ARG A 630 1 13 HELIX 26 AC8 ALA A 656 TYR A 672 1 17 HELIX 27 AC9 TYR A 672 MET A 684 1 13 SHEET 1 AA1 2 ARG A 43 GLU A 45 0 SHEET 2 AA1 2 THR A 149 VAL A 151 -1 O VAL A 151 N ARG A 43 SHEET 1 AA2 6 ALA A 126 ILE A 129 0 SHEET 2 AA2 6 ILE A 91 PHE A 96 1 N ARG A 95 O MET A 128 SHEET 3 AA2 6 MET A 81 SER A 86 -1 N CYS A 83 O MET A 94 SHEET 4 AA2 6 TYR A 61 ILE A 73 -1 N LEU A 69 O GLN A 84 SHEET 5 AA2 6 ARG A 112 GLU A 118 -1 O ALA A 115 N VAL A 64 SHEET 6 AA2 6 GLU A 132 VAL A 135 -1 O GLU A 132 N TYR A 116 SHEET 1 AA3 7 VAL A 348 LEU A 351 0 SHEET 2 AA3 7 MET A 374 GLY A 377 1 O MET A 374 N GLY A 349 SHEET 3 AA3 7 GLN A 319 MET A 323 1 N LEU A 322 O ILE A 375 SHEET 4 AA3 7 LEU A 391 ASP A 397 1 O ILE A 395 N ALA A 321 SHEET 5 AA3 7 HIS A 422 THR A 427 1 O LEU A 424 N ILE A 396 SHEET 6 AA3 7 MET A 291 GLY A 296 1 N VAL A 294 O ILE A 425 SHEET 7 AA3 7 ASP A 444 ILE A 448 1 O ASP A 444 N LEU A 293 SHEET 1 AA4 6 THR A 459 PRO A 464 0 SHEET 2 AA4 6 HIS A 593 TYR A 598 1 O CYS A 594 N THR A 459 SHEET 3 AA4 6 ALA A 562 GLU A 568 1 N ILE A 567 O VAL A 595 SHEET 4 AA4 6 GLN A 485 VAL A 489 1 N TYR A 487 O LEU A 564 SHEET 5 AA4 6 LEU A 546 ALA A 549 1 O LEU A 547 N ALA A 486 SHEET 6 AA4 6 VAL A 520 VAL A 523 1 N GLY A 521 O VAL A 548 LINK O2B ADP A 801 AL ALF A 802 1555 1555 2.06 LINK O3B ADP A 801 MG MG A 803 1555 1555 2.56 CRYST1 59.250 140.452 176.960 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016878 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007120 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005651 0.00000 CONECT 6589 6590 6591 6592 6596 CONECT 6590 6589 CONECT 6591 6589 6616 CONECT 6592 6589 6621 CONECT 6593 6594 6595 6596 6597 CONECT 6594 6593 CONECT 6595 6593 CONECT 6596 6589 6593 CONECT 6597 6593 6598 CONECT 6598 6597 6599 CONECT 6599 6598 6600 6601 CONECT 6600 6599 6605 CONECT 6601 6599 6602 6603 CONECT 6602 6601 CONECT 6603 6601 6604 6605 CONECT 6604 6603 CONECT 6605 6600 6603 6606 CONECT 6606 6605 6607 6615 CONECT 6607 6606 6608 CONECT 6608 6607 6609 CONECT 6609 6608 6610 6615 CONECT 6610 6609 6611 6612 CONECT 6611 6610 CONECT 6612 6610 6613 CONECT 6613 6612 6614 CONECT 6614 6613 6615 CONECT 6615 6606 6609 6614 CONECT 6616 6591 6617 6618 6619 CONECT 6616 6620 CONECT 6617 6616 CONECT 6618 6616 CONECT 6619 6616 CONECT 6620 6616 CONECT 6621 6592 MASTER 345 0 3 27 21 0 0 6 6617 4 34 60 END