data_9WRP # _entry.id 9WRP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9WRP pdb_00009wrp 10.2210/pdb9wrp/pdb WWPDB D_1300051350 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-09-16 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9WRP _pdbx_database_status.recvd_initial_deposition_date 2025-09-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'PDB entry for same citation' 9WRQ unspecified PDB 'PDB entry for same citation' 9WRR unspecified PDB 'PDB entry for same citation' 9WS9 unspecified PDB 'PDB entry for same citation' 9WRS unspecified PDB 'PDB entry for same citation' 9WRT unspecified PDB 'PDB entry for same citation' 9WRU unspecified PDB 'PDB entry for same citation' 9WRV unspecified PDB 'PDB entry for same citation' 9WRW unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email kumasaka@spring8.or.jp _pdbx_contact_author.name_first Takashi _pdbx_contact_author.name_last Kumasaka _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9289-1557 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kawamura, T.' 1 0000-0001-5941-9912 'Kumasaka, T.' 2 0000-0001-9289-1557 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Observation of Ras protein GTP hydrolysis and conformation change' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kawamura, T.' 1 ? primary 'Sakisaka, W.' 2 ? primary 'Makono, Y.' 3 ? primary 'Yoshikawa, Y.' 4 ? primary 'Kumasaka, T.' 5 ? primary 'Shima, F.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTPase HRas' 19286.646 1 ? ? ? ;The first five residues (1-GPLGS-5) and the central 10 residues (65-GQEEYSAMRD-74) of the sample sequence were not incorporated into the coordinates due to unclear electron density. The first five residues are traces of a linker for fusion with a GST tag that is cleaved by protease. ; 2 non-polymer syn ;GUANOSINE 5'-TRIPHOSPHATE P3-[1-(2-NITROPHENYL)ETHYL ESTER] ; 672.327 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 5 water nat water 18.015 73 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'H-Ras-1,Ha-Ras,Transforming protein p21,c-H-ras,p21ras' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG EGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDA FYTLVREIRQH ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG EGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDA FYTLVREIRQH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;GUANOSINE 5'-TRIPHOSPHATE P3-[1-(2-NITROPHENYL)ETHYL ESTER] ; CAG 3 'MAGNESIUM ION' MG 4 'CALCIUM ION' CA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 MET n 1 7 THR n 1 8 GLU n 1 9 TYR n 1 10 LYS n 1 11 LEU n 1 12 VAL n 1 13 VAL n 1 14 VAL n 1 15 GLY n 1 16 ALA n 1 17 GLY n 1 18 GLY n 1 19 VAL n 1 20 GLY n 1 21 LYS n 1 22 SER n 1 23 ALA n 1 24 LEU n 1 25 THR n 1 26 ILE n 1 27 GLN n 1 28 LEU n 1 29 ILE n 1 30 GLN n 1 31 ASN n 1 32 HIS n 1 33 PHE n 1 34 VAL n 1 35 ASP n 1 36 GLU n 1 37 TYR n 1 38 ASP n 1 39 PRO n 1 40 THR n 1 41 ILE n 1 42 GLU n 1 43 ASP n 1 44 SER n 1 45 TYR n 1 46 ARG n 1 47 LYS n 1 48 GLN n 1 49 VAL n 1 50 VAL n 1 51 ILE n 1 52 ASP n 1 53 GLY n 1 54 GLU n 1 55 THR n 1 56 CYS n 1 57 LEU n 1 58 LEU n 1 59 ASP n 1 60 ILE n 1 61 LEU n 1 62 ASP n 1 63 THR n 1 64 ALA n 1 65 GLY n 1 66 GLN n 1 67 GLU n 1 68 GLU n 1 69 TYR n 1 70 SER n 1 71 ALA n 1 72 MET n 1 73 ARG n 1 74 ASP n 1 75 GLN n 1 76 TYR n 1 77 MET n 1 78 ARG n 1 79 THR n 1 80 GLY n 1 81 GLU n 1 82 GLY n 1 83 PHE n 1 84 LEU n 1 85 CYS n 1 86 VAL n 1 87 PHE n 1 88 ALA n 1 89 ILE n 1 90 ASN n 1 91 ASN n 1 92 THR n 1 93 LYS n 1 94 SER n 1 95 PHE n 1 96 GLU n 1 97 ASP n 1 98 ILE n 1 99 HIS n 1 100 GLN n 1 101 TYR n 1 102 ARG n 1 103 GLU n 1 104 GLN n 1 105 ILE n 1 106 LYS n 1 107 ARG n 1 108 VAL n 1 109 LYS n 1 110 ASP n 1 111 SER n 1 112 ASP n 1 113 ASP n 1 114 VAL n 1 115 PRO n 1 116 MET n 1 117 VAL n 1 118 LEU n 1 119 VAL n 1 120 GLY n 1 121 ASN n 1 122 LYS n 1 123 CYS n 1 124 ASP n 1 125 LEU n 1 126 ALA n 1 127 ALA n 1 128 ARG n 1 129 THR n 1 130 VAL n 1 131 GLU n 1 132 SER n 1 133 ARG n 1 134 GLN n 1 135 ALA n 1 136 GLN n 1 137 ASP n 1 138 LEU n 1 139 ALA n 1 140 ARG n 1 141 SER n 1 142 TYR n 1 143 GLY n 1 144 ILE n 1 145 PRO n 1 146 TYR n 1 147 ILE n 1 148 GLU n 1 149 THR n 1 150 SER n 1 151 ALA n 1 152 LYS n 1 153 THR n 1 154 ARG n 1 155 GLN n 1 156 GLY n 1 157 VAL n 1 158 GLU n 1 159 ASP n 1 160 ALA n 1 161 PHE n 1 162 TYR n 1 163 THR n 1 164 LEU n 1 165 VAL n 1 166 ARG n 1 167 GLU n 1 168 ILE n 1 169 ARG n 1 170 GLN n 1 171 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 171 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HRAS, HRAS1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CAG non-polymer . ;GUANOSINE 5'-TRIPHOSPHATE P3-[1-(2-NITROPHENYL)ETHYL ESTER] ; ? 'C18 H23 N6 O16 P3' 672.327 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 PRO 2 -3 ? ? ? A . n A 1 3 LEU 3 -2 ? ? ? A . n A 1 4 GLY 4 -1 ? ? ? A . n A 1 5 SER 5 0 ? ? ? A . n A 1 6 MET 6 1 1 MET MET A . n A 1 7 THR 7 2 2 THR THR A . n A 1 8 GLU 8 3 3 GLU GLU A . n A 1 9 TYR 9 4 4 TYR TYR A . n A 1 10 LYS 10 5 5 LYS LYS A . n A 1 11 LEU 11 6 6 LEU LEU A . n A 1 12 VAL 12 7 7 VAL VAL A . n A 1 13 VAL 13 8 8 VAL VAL A . n A 1 14 VAL 14 9 9 VAL VAL A . n A 1 15 GLY 15 10 10 GLY GLY A . n A 1 16 ALA 16 11 11 ALA ALA A . n A 1 17 GLY 17 12 12 GLY GLY A . n A 1 18 GLY 18 13 13 GLY GLY A . n A 1 19 VAL 19 14 14 VAL VAL A . n A 1 20 GLY 20 15 15 GLY GLY A . n A 1 21 LYS 21 16 16 LYS LYS A . n A 1 22 SER 22 17 17 SER SER A . n A 1 23 ALA 23 18 18 ALA ALA A . n A 1 24 LEU 24 19 19 LEU LEU A . n A 1 25 THR 25 20 20 THR THR A . n A 1 26 ILE 26 21 21 ILE ILE A . n A 1 27 GLN 27 22 22 GLN GLN A . n A 1 28 LEU 28 23 23 LEU LEU A . n A 1 29 ILE 29 24 24 ILE ILE A . n A 1 30 GLN 30 25 25 GLN GLN A . n A 1 31 ASN 31 26 26 ASN ASN A . n A 1 32 HIS 32 27 27 HIS HIS A . n A 1 33 PHE 33 28 28 PHE PHE A . n A 1 34 VAL 34 29 29 VAL VAL A . n A 1 35 ASP 35 30 30 ASP ASP A . n A 1 36 GLU 36 31 31 GLU GLU A . n A 1 37 TYR 37 32 32 TYR TYR A . n A 1 38 ASP 38 33 33 ASP ASP A . n A 1 39 PRO 39 34 34 PRO PRO A . n A 1 40 THR 40 35 35 THR THR A . n A 1 41 ILE 41 36 36 ILE ILE A . n A 1 42 GLU 42 37 37 GLU GLU A . n A 1 43 ASP 43 38 38 ASP ASP A . n A 1 44 SER 44 39 39 SER SER A . n A 1 45 TYR 45 40 40 TYR TYR A . n A 1 46 ARG 46 41 41 ARG ARG A . n A 1 47 LYS 47 42 42 LYS LYS A . n A 1 48 GLN 48 43 43 GLN GLN A . n A 1 49 VAL 49 44 44 VAL VAL A . n A 1 50 VAL 50 45 45 VAL VAL A . n A 1 51 ILE 51 46 46 ILE ILE A . n A 1 52 ASP 52 47 47 ASP ASP A . n A 1 53 GLY 53 48 48 GLY GLY A . n A 1 54 GLU 54 49 49 GLU GLU A . n A 1 55 THR 55 50 50 THR THR A . n A 1 56 CYS 56 51 51 CYS CYS A . n A 1 57 LEU 57 52 52 LEU LEU A . n A 1 58 LEU 58 53 53 LEU LEU A . n A 1 59 ASP 59 54 54 ASP ASP A . n A 1 60 ILE 60 55 55 ILE ILE A . n A 1 61 LEU 61 56 56 LEU LEU A . n A 1 62 ASP 62 57 57 ASP ASP A . n A 1 63 THR 63 58 58 THR THR A . n A 1 64 ALA 64 59 59 ALA ALA A . n A 1 65 GLY 65 60 ? ? ? A . n A 1 66 GLN 66 61 ? ? ? A . n A 1 67 GLU 67 62 ? ? ? A . n A 1 68 GLU 68 63 ? ? ? A . n A 1 69 TYR 69 64 ? ? ? A . n A 1 70 SER 70 65 ? ? ? A . n A 1 71 ALA 71 66 ? ? ? A . n A 1 72 MET 72 67 ? ? ? A . n A 1 73 ARG 73 68 ? ? ? A . n A 1 74 ASP 74 69 ? ? ? A . n A 1 75 GLN 75 70 70 GLN GLN A . n A 1 76 TYR 76 71 71 TYR TYR A . n A 1 77 MET 77 72 72 MET MET A . n A 1 78 ARG 78 73 73 ARG ARG A . n A 1 79 THR 79 74 74 THR THR A . n A 1 80 GLY 80 75 75 GLY GLY A . n A 1 81 GLU 81 76 76 GLU GLU A . n A 1 82 GLY 82 77 77 GLY GLY A . n A 1 83 PHE 83 78 78 PHE PHE A . n A 1 84 LEU 84 79 79 LEU LEU A . n A 1 85 CYS 85 80 80 CYS CYS A . n A 1 86 VAL 86 81 81 VAL VAL A . n A 1 87 PHE 87 82 82 PHE PHE A . n A 1 88 ALA 88 83 83 ALA ALA A . n A 1 89 ILE 89 84 84 ILE ILE A . n A 1 90 ASN 90 85 85 ASN ASN A . n A 1 91 ASN 91 86 86 ASN ASN A . n A 1 92 THR 92 87 87 THR THR A . n A 1 93 LYS 93 88 88 LYS LYS A . n A 1 94 SER 94 89 89 SER SER A . n A 1 95 PHE 95 90 90 PHE PHE A . n A 1 96 GLU 96 91 91 GLU GLU A . n A 1 97 ASP 97 92 92 ASP ASP A . n A 1 98 ILE 98 93 93 ILE ILE A . n A 1 99 HIS 99 94 94 HIS HIS A . n A 1 100 GLN 100 95 95 GLN GLN A . n A 1 101 TYR 101 96 96 TYR TYR A . n A 1 102 ARG 102 97 97 ARG ARG A . n A 1 103 GLU 103 98 98 GLU GLU A . n A 1 104 GLN 104 99 99 GLN GLN A . n A 1 105 ILE 105 100 100 ILE ILE A . n A 1 106 LYS 106 101 101 LYS LYS A . n A 1 107 ARG 107 102 102 ARG ARG A . n A 1 108 VAL 108 103 103 VAL VAL A . n A 1 109 LYS 109 104 104 LYS LYS A . n A 1 110 ASP 110 105 105 ASP ASP A . n A 1 111 SER 111 106 106 SER SER A . n A 1 112 ASP 112 107 107 ASP ASP A . n A 1 113 ASP 113 108 108 ASP ASP A . n A 1 114 VAL 114 109 109 VAL VAL A . n A 1 115 PRO 115 110 110 PRO PRO A . n A 1 116 MET 116 111 111 MET MET A . n A 1 117 VAL 117 112 112 VAL VAL A . n A 1 118 LEU 118 113 113 LEU LEU A . n A 1 119 VAL 119 114 114 VAL VAL A . n A 1 120 GLY 120 115 115 GLY GLY A . n A 1 121 ASN 121 116 116 ASN ASN A . n A 1 122 LYS 122 117 117 LYS LYS A . n A 1 123 CYS 123 118 118 CYS CYS A . n A 1 124 ASP 124 119 119 ASP ASP A . n A 1 125 LEU 125 120 120 LEU LEU A . n A 1 126 ALA 126 121 121 ALA ALA A . n A 1 127 ALA 127 122 122 ALA ALA A . n A 1 128 ARG 128 123 123 ARG ARG A . n A 1 129 THR 129 124 124 THR THR A . n A 1 130 VAL 130 125 125 VAL VAL A . n A 1 131 GLU 131 126 126 GLU GLU A . n A 1 132 SER 132 127 127 SER SER A . n A 1 133 ARG 133 128 128 ARG ARG A . n A 1 134 GLN 134 129 129 GLN GLN A . n A 1 135 ALA 135 130 130 ALA ALA A . n A 1 136 GLN 136 131 131 GLN GLN A . n A 1 137 ASP 137 132 132 ASP ASP A . n A 1 138 LEU 138 133 133 LEU LEU A . n A 1 139 ALA 139 134 134 ALA ALA A . n A 1 140 ARG 140 135 135 ARG ARG A . n A 1 141 SER 141 136 136 SER SER A . n A 1 142 TYR 142 137 137 TYR TYR A . n A 1 143 GLY 143 138 138 GLY GLY A . n A 1 144 ILE 144 139 139 ILE ILE A . n A 1 145 PRO 145 140 140 PRO PRO A . n A 1 146 TYR 146 141 141 TYR TYR A . n A 1 147 ILE 147 142 142 ILE ILE A . n A 1 148 GLU 148 143 143 GLU GLU A . n A 1 149 THR 149 144 144 THR THR A . n A 1 150 SER 150 145 145 SER SER A . n A 1 151 ALA 151 146 146 ALA ALA A . n A 1 152 LYS 152 147 147 LYS LYS A . n A 1 153 THR 153 148 148 THR THR A . n A 1 154 ARG 154 149 149 ARG ARG A . n A 1 155 GLN 155 150 150 GLN GLN A . n A 1 156 GLY 156 151 151 GLY GLY A . n A 1 157 VAL 157 152 152 VAL VAL A . n A 1 158 GLU 158 153 153 GLU GLU A . n A 1 159 ASP 159 154 154 ASP ASP A . n A 1 160 ALA 160 155 155 ALA ALA A . n A 1 161 PHE 161 156 156 PHE PHE A . n A 1 162 TYR 162 157 157 TYR TYR A . n A 1 163 THR 163 158 158 THR THR A . n A 1 164 LEU 164 159 159 LEU LEU A . n A 1 165 VAL 165 160 160 VAL VAL A . n A 1 166 ARG 166 161 161 ARG ARG A . n A 1 167 GLU 167 162 162 GLU GLU A . n A 1 168 ILE 168 163 163 ILE ILE A . n A 1 169 ARG 169 164 164 ARG ARG A . n A 1 170 GLN 170 165 165 GLN GLN A . n A 1 171 HIS 171 166 166 HIS HIS A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id CAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id CAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CAG 1 201 171 CAG CAG A . C 3 MG 1 202 1 MG MG A . D 4 CA 1 203 1 CA CA A . E 5 HOH 1 301 35 HOH HOH A . E 5 HOH 2 302 7 HOH HOH A . E 5 HOH 3 303 20 HOH HOH A . E 5 HOH 4 304 26 HOH HOH A . E 5 HOH 5 305 14 HOH HOH A . E 5 HOH 6 306 29 HOH HOH A . E 5 HOH 7 307 72 HOH HOH A . E 5 HOH 8 308 5 HOH HOH A . E 5 HOH 9 309 4 HOH HOH A . E 5 HOH 10 310 32 HOH HOH A . E 5 HOH 11 311 51 HOH HOH A . E 5 HOH 12 312 21 HOH HOH A . E 5 HOH 13 313 45 HOH HOH A . E 5 HOH 14 314 25 HOH HOH A . E 5 HOH 15 315 86 HOH HOH A . E 5 HOH 16 316 93 HOH HOH A . E 5 HOH 17 317 18 HOH HOH A . E 5 HOH 18 318 55 HOH HOH A . E 5 HOH 19 319 6 HOH HOH A . E 5 HOH 20 320 78 HOH HOH A . E 5 HOH 21 321 95 HOH HOH A . E 5 HOH 22 322 8 HOH HOH A . E 5 HOH 23 323 10 HOH HOH A . E 5 HOH 24 324 76 HOH HOH A . E 5 HOH 25 325 96 HOH HOH A . E 5 HOH 26 326 2 HOH HOH A . E 5 HOH 27 327 40 HOH HOH A . E 5 HOH 28 328 15 HOH HOH A . E 5 HOH 29 329 41 HOH HOH A . E 5 HOH 30 330 37 HOH HOH A . E 5 HOH 31 331 19 HOH HOH A . E 5 HOH 32 332 13 HOH HOH A . E 5 HOH 33 333 17 HOH HOH A . E 5 HOH 34 334 53 HOH HOH A . E 5 HOH 35 335 3 HOH HOH A . E 5 HOH 36 336 31 HOH HOH A . E 5 HOH 37 337 90 HOH HOH A . E 5 HOH 38 338 80 HOH HOH A . E 5 HOH 39 339 36 HOH HOH A . E 5 HOH 40 340 89 HOH HOH A . E 5 HOH 41 341 49 HOH HOH A . E 5 HOH 42 342 83 HOH HOH A . E 5 HOH 43 343 12 HOH HOH A . E 5 HOH 44 344 23 HOH HOH A . E 5 HOH 45 345 50 HOH HOH A . E 5 HOH 46 346 70 HOH HOH A . E 5 HOH 47 347 57 HOH HOH A . E 5 HOH 48 348 11 HOH HOH A . E 5 HOH 49 349 1 HOH HOH A . E 5 HOH 50 350 22 HOH HOH A . E 5 HOH 51 351 27 HOH HOH A . E 5 HOH 52 352 61 HOH HOH A . E 5 HOH 53 353 69 HOH HOH A . E 5 HOH 54 354 34 HOH HOH A . E 5 HOH 55 355 42 HOH HOH A . E 5 HOH 56 356 60 HOH HOH A . E 5 HOH 57 357 9 HOH HOH A . E 5 HOH 58 358 38 HOH HOH A . E 5 HOH 59 359 52 HOH HOH A . E 5 HOH 60 360 82 HOH HOH A . E 5 HOH 61 361 39 HOH HOH A . E 5 HOH 62 362 16 HOH HOH A . E 5 HOH 63 363 44 HOH HOH A . E 5 HOH 64 364 67 HOH HOH A . E 5 HOH 65 365 46 HOH HOH A . E 5 HOH 66 366 58 HOH HOH A . E 5 HOH 67 367 91 HOH HOH A . E 5 HOH 68 368 71 HOH HOH A . E 5 HOH 69 369 43 HOH HOH A . E 5 HOH 70 370 33 HOH HOH A . E 5 HOH 71 371 94 HOH HOH A . E 5 HOH 72 372 92 HOH HOH A . E 5 HOH 73 373 97 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 31 ? CG ? A GLU 36 CG 2 1 Y 1 A GLU 31 ? CD ? A GLU 36 CD 3 1 Y 1 A GLU 31 ? OE1 ? A GLU 36 OE1 4 1 Y 1 A GLU 31 ? OE2 ? A GLU 36 OE2 5 1 Y 1 A GLN 70 ? CG ? A GLN 75 CG 6 1 Y 1 A GLN 70 ? CD ? A GLN 75 CD 7 1 Y 1 A GLN 70 ? OE1 ? A GLN 75 OE1 8 1 Y 1 A GLN 70 ? NE2 ? A GLN 75 NE2 9 1 Y 1 A TYR 71 ? CG ? A TYR 76 CG 10 1 Y 1 A TYR 71 ? CD1 ? A TYR 76 CD1 11 1 Y 1 A TYR 71 ? CD2 ? A TYR 76 CD2 12 1 Y 1 A TYR 71 ? CE1 ? A TYR 76 CE1 13 1 Y 1 A TYR 71 ? CE2 ? A TYR 76 CE2 14 1 Y 1 A TYR 71 ? CZ ? A TYR 76 CZ 15 1 Y 1 A TYR 71 ? OH ? A TYR 76 OH # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.2_5419 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? CrystFEL ? ? ? 0.10.1 ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? CrystFEL ? ? ? 0.10.1 ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.3 ? 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 9WRP _cell.details ? _cell.formula_units_Z ? _cell.length_a 93.708 _cell.length_a_esd ? _cell.length_b 93.708 _cell.length_b_esd ? _cell.length_c 121.512 _cell.length_c_esd ? _cell.volume 924066.314 _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9WRP _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ;R 3 2" ; _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9WRP _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'BATCH MODE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '18% w/v PEG 6000, 0.2M calcium acetate, 0.1M MES pH 6.4, microseeding' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment Y # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 XE 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2025-02-13 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'SI(111) SILICON CRYSTAL' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate 21.55 _reflns.entry_id 9WRP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 67.57 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19304 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 796.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.64 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split 0.0906 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.83 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.80 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 953 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 542.9 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.632 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split 0.6568 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 22.56 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9WRP _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8 _refine.ls_d_res_low 67.49 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 19302 _refine.ls_number_reflns_R_free 960 _refine.ls_number_reflns_R_work 18342 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.87 _refine.ls_percent_reflns_R_free 4.97 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1886 _refine.ls_R_factor_R_free 0.2202 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1870 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.7248 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1416 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 67.49 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 1345 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1227 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0062 ? 1289 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.8257 ? 1750 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0518 ? 199 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0073 ? 222 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 16.7746 ? 506 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.80 1.89 . . 133 2574 99.12 . . . . 0.2391 . . . . . . . . . . . . . . . 0.2712 'X-RAY DIFFRACTION' 1.89 2.01 . . 145 2573 100.00 . . . . 0.2180 . . . . . . . . . . . . . . . 0.2212 'X-RAY DIFFRACTION' 2.01 2.17 . . 132 2612 100.00 . . . . 0.1962 . . . . . . . . . . . . . . . 0.2352 'X-RAY DIFFRACTION' 2.17 2.38 . . 141 2587 100.00 . . . . 0.1825 . . . . . . . . . . . . . . . 0.2410 'X-RAY DIFFRACTION' 2.38 2.73 . . 132 2621 99.96 . . . . 0.1900 . . . . . . . . . . . . . . . 0.2087 'X-RAY DIFFRACTION' 2.73 3.44 . . 138 2641 100.00 . . . . 0.1840 . . . . . . . . . . . . . . . 0.2173 'X-RAY DIFFRACTION' 3.44 67.49 . . 139 2734 99.97 . . . . 0.1679 . . . . . . . . . . . . . . . 0.2030 # _struct.entry_id 9WRP _struct.title 'SS-ROX structure analysis of H-Ras using caged-compound complex: before UV light irradiation (NPE-caged GTP bound)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9WRP _struct_keywords.text 'Ras, serial crystallography, NPE-caged GTP, complex, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RASH_HUMAN _struct_ref.pdbx_db_accession P01112 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQH ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9WRP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 171 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01112 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 166 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 166 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9WRP GLY A 1 ? UNP P01112 ? ? 'expression tag' -4 1 1 9WRP PRO A 2 ? UNP P01112 ? ? 'expression tag' -3 2 1 9WRP LEU A 3 ? UNP P01112 ? ? 'expression tag' -2 3 1 9WRP GLY A 4 ? UNP P01112 ? ? 'expression tag' -1 4 1 9WRP SER A 5 ? UNP P01112 ? ? 'expression tag' 0 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1080 ? 1 MORE -17 ? 1 'SSA (A^2)' 7720 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 20 ? ASN A 31 ? GLY A 15 ASN A 26 1 ? 12 HELX_P HELX_P2 AA2 TYR A 76 ? GLY A 80 ? TYR A 71 GLY A 75 1 ? 5 HELX_P HELX_P3 AA3 ASN A 91 ? ASP A 97 ? ASN A 86 ASP A 92 1 ? 7 HELX_P HELX_P4 AA4 ASP A 97 ? ASP A 110 ? ASP A 92 ASP A 105 1 ? 14 HELX_P HELX_P5 AA5 GLU A 131 ? GLY A 143 ? GLU A 126 GLY A 138 1 ? 13 HELX_P HELX_P6 AA6 GLY A 156 ? GLN A 170 ? GLY A 151 GLN A 165 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 22 OG ? ? ? 1_555 C MG . MG ? ? A SER 17 A MG 202 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc2 metalc ? ? A GLY 143 O ? ? ? 1_555 D CA . CA ? ? A GLY 138 A CA 203 1_555 ? ? ? ? ? ? ? 2.301 ? ? metalc3 metalc ? ? B CAG . O1G ? ? ? 1_555 C MG . MG ? ? A CAG 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.253 ? ? metalc4 metalc ? ? B CAG . O2B ? ? ? 1_555 C MG . MG ? ? A CAG 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.411 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 202 A HOH 308 1_555 ? ? ? ? ? ? ? 2.394 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 202 A HOH 309 1_555 ? ? ? ? ? ? ? 2.243 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 202 A HOH 361 1_555 ? ? ? ? ? ? ? 2.460 ? ? metalc8 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 203 A HOH 301 11_444 ? ? ? ? ? ? ? 2.945 ? ? metalc9 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 203 A HOH 370 1_555 ? ? ? ? ? ? ? 2.357 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O1G ? B CAG . ? A CAG 201 ? 1_555 162.3 ? 2 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? B CAG . ? A CAG 201 ? 1_555 82.3 ? 3 O1G ? B CAG . ? A CAG 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? B CAG . ? A CAG 201 ? 1_555 80.2 ? 4 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 308 ? 1_555 88.4 ? 5 O1G ? B CAG . ? A CAG 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 308 ? 1_555 91.1 ? 6 O2B ? B CAG . ? A CAG 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 308 ? 1_555 80.2 ? 7 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 309 ? 1_555 79.2 ? 8 O1G ? B CAG . ? A CAG 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 309 ? 1_555 98.0 ? 9 O2B ? B CAG . ? A CAG 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 309 ? 1_555 89.5 ? 10 O ? E HOH . ? A HOH 308 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 309 ? 1_555 164.9 ? 11 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 361 ? 1_555 79.1 ? 12 O1G ? B CAG . ? A CAG 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 361 ? 1_555 118.6 ? 13 O2B ? B CAG . ? A CAG 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 361 ? 1_555 157.9 ? 14 O ? E HOH . ? A HOH 308 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 361 ? 1_555 87.4 ? 15 O ? E HOH . ? A HOH 309 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 361 ? 1_555 98.7 ? 16 O ? A GLY 143 ? A GLY 138 ? 1_555 CA ? D CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 301 ? 11_444 66.4 ? 17 O ? A GLY 143 ? A GLY 138 ? 1_555 CA ? D CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 370 ? 1_555 99.0 ? 18 O ? E HOH . ? A HOH 301 ? 11_444 CA ? D CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 370 ? 1_555 120.2 ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 44 ? ILE A 51 ? SER A 39 ILE A 46 AA1 2 GLU A 54 ? ASP A 62 ? GLU A 49 ASP A 57 AA1 3 THR A 7 ? GLY A 15 ? THR A 2 GLY A 10 AA1 4 GLY A 82 ? ALA A 88 ? GLY A 77 ALA A 83 AA1 5 MET A 116 ? ASN A 121 ? MET A 111 ASN A 116 AA1 6 TYR A 146 ? GLU A 148 ? TYR A 141 GLU A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 49 ? N VAL A 44 O CYS A 56 ? O CYS A 51 AA1 2 3 O ASP A 59 ? O ASP A 54 N TYR A 9 ? N TYR A 4 AA1 3 4 N VAL A 14 ? N VAL A 9 O VAL A 86 ? O VAL A 81 AA1 4 5 N PHE A 87 ? N PHE A 82 O ASN A 121 ? O ASN A 116 AA1 5 6 N LEU A 118 ? N LEU A 113 O ILE A 147 ? O ILE A 142 # _pdbx_entry_details.entry_id 9WRP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 149 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 76.81 _pdbx_validate_torsion.psi -3.06 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z 3 -x+y,-x,z 4 x-y,-y,-z 5 -x,-x+y,-z 6 y,x,-z 7 x+1/3,y+2/3,z+2/3 8 -y+1/3,x-y+2/3,z+2/3 9 -x+y+1/3,-x+2/3,z+2/3 10 x-y+1/3,-y+2/3,-z+2/3 11 -x+1/3,-x+y+2/3,-z+2/3 12 y+1/3,x+2/3,-z+2/3 13 x+2/3,y+1/3,z+1/3 14 -y+2/3,x-y+1/3,z+1/3 15 -x+y+2/3,-x+1/3,z+1/3 16 x-y+2/3,-y+1/3,-z+1/3 17 -x+2/3,-x+y+1/3,-z+1/3 18 y+2/3,x+1/3,-z+1/3 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A PRO -3 ? A PRO 2 3 1 Y 1 A LEU -2 ? A LEU 3 4 1 Y 1 A GLY -1 ? A GLY 4 5 1 Y 1 A SER 0 ? A SER 5 6 1 Y 1 A GLY 60 ? A GLY 65 7 1 Y 1 A GLN 61 ? A GLN 66 8 1 Y 1 A GLU 62 ? A GLU 67 9 1 Y 1 A GLU 63 ? A GLU 68 10 1 Y 1 A TYR 64 ? A TYR 69 11 1 Y 1 A SER 65 ? A SER 70 12 1 Y 1 A ALA 66 ? A ALA 71 13 1 Y 1 A MET 67 ? A MET 72 14 1 Y 1 A ARG 68 ? A ARG 73 15 1 Y 1 A ASP 69 ? A ASP 74 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CAG PG P N S 75 CAG O1G O N N 76 CAG O2G O N N 77 CAG O3G O N N 78 CAG PB P N S 79 CAG O1B O N N 80 CAG O2B O N N 81 CAG O3B O N N 82 CAG PA P N S 83 CAG O1A O N N 84 CAG O2A O N N 85 CAG O3A O N N 86 CAG "O5'" O N N 87 CAG C5B C N N 88 CAG C4B C N R 89 CAG "O4'" O N N 90 CAG C3B C N S 91 CAG "O3'" O N N 92 CAG C2B C N R 93 CAG "O2'" O N N 94 CAG C1B C N R 95 CAG N9 N Y N 96 CAG C8 C Y N 97 CAG N7 N Y N 98 CAG C5 C Y N 99 CAG C6 C Y N 100 CAG O6 O N N 101 CAG N1 N Y N 102 CAG C2 C Y N 103 CAG N2 N N N 104 CAG N3 N Y N 105 CAG C4 C Y N 106 CAG "C'" C N R 107 CAG "CM'" C N N 108 CAG "C1'" C Y N 109 CAG "C2'" C Y N 110 CAG "N2'" N N N 111 CAG "O'L" O N N 112 CAG "O'M" O N N 113 CAG "C3'" C Y N 114 CAG "C4'" C Y N 115 CAG "C5'" C Y N 116 CAG "C6'" C Y N 117 CAG HOG2 H N N 118 CAG HOB2 H N N 119 CAG HOA2 H N N 120 CAG "H5'1" H N N 121 CAG "H5'2" H N N 122 CAG H4B H N N 123 CAG H3B H N N 124 CAG HO3 H N N 125 CAG "H2'" H N N 126 CAG HO2 H N N 127 CAG "H1'" H N N 128 CAG H8 H N N 129 CAG H1 H N N 130 CAG H21 H N N 131 CAG H22 H N N 132 CAG "H'" H N N 133 CAG HCM1 H N N 134 CAG HCM2 H N N 135 CAG HCM3 H N N 136 CAG "H3'" H N N 137 CAG "H4'" H N N 138 CAG "H5'" H N N 139 CAG "H6'" H N N 140 CYS N N N N 141 CYS CA C N R 142 CYS C C N N 143 CYS O O N N 144 CYS CB C N N 145 CYS SG S N N 146 CYS OXT O N N 147 CYS H H N N 148 CYS H2 H N N 149 CYS HA H N N 150 CYS HB2 H N N 151 CYS HB3 H N N 152 CYS HG H N N 153 CYS HXT H N N 154 GLN N N N N 155 GLN CA C N S 156 GLN C C N N 157 GLN O O N N 158 GLN CB C N N 159 GLN CG C N N 160 GLN CD C N N 161 GLN OE1 O N N 162 GLN NE2 N N N 163 GLN OXT O N N 164 GLN H H N N 165 GLN H2 H N N 166 GLN HA H N N 167 GLN HB2 H N N 168 GLN HB3 H N N 169 GLN HG2 H N N 170 GLN HG3 H N N 171 GLN HE21 H N N 172 GLN HE22 H N N 173 GLN HXT H N N 174 GLU N N N N 175 GLU CA C N S 176 GLU C C N N 177 GLU O O N N 178 GLU CB C N N 179 GLU CG C N N 180 GLU CD C N N 181 GLU OE1 O N N 182 GLU OE2 O N N 183 GLU OXT O N N 184 GLU H H N N 185 GLU H2 H N N 186 GLU HA H N N 187 GLU HB2 H N N 188 GLU HB3 H N N 189 GLU HG2 H N N 190 GLU HG3 H N N 191 GLU HE2 H N N 192 GLU HXT H N N 193 GLY N N N N 194 GLY CA C N N 195 GLY C C N N 196 GLY O O N N 197 GLY OXT O N N 198 GLY H H N N 199 GLY H2 H N N 200 GLY HA2 H N N 201 GLY HA3 H N N 202 GLY HXT H N N 203 HIS N N N N 204 HIS CA C N S 205 HIS C C N N 206 HIS O O N N 207 HIS CB C N N 208 HIS CG C Y N 209 HIS ND1 N Y N 210 HIS CD2 C Y N 211 HIS CE1 C Y N 212 HIS NE2 N Y N 213 HIS OXT O N N 214 HIS H H N N 215 HIS H2 H N N 216 HIS HA H N N 217 HIS HB2 H N N 218 HIS HB3 H N N 219 HIS HD1 H N N 220 HIS HD2 H N N 221 HIS HE1 H N N 222 HIS HE2 H N N 223 HIS HXT H N N 224 HOH O O N N 225 HOH H1 H N N 226 HOH H2 H N N 227 ILE N N N N 228 ILE CA C N S 229 ILE C C N N 230 ILE O O N N 231 ILE CB C N S 232 ILE CG1 C N N 233 ILE CG2 C N N 234 ILE CD1 C N N 235 ILE OXT O N N 236 ILE H H N N 237 ILE H2 H N N 238 ILE HA H N N 239 ILE HB H N N 240 ILE HG12 H N N 241 ILE HG13 H N N 242 ILE HG21 H N N 243 ILE HG22 H N N 244 ILE HG23 H N N 245 ILE HD11 H N N 246 ILE HD12 H N N 247 ILE HD13 H N N 248 ILE HXT H N N 249 LEU N N N N 250 LEU CA C N S 251 LEU C C N N 252 LEU O O N N 253 LEU CB C N N 254 LEU CG C N N 255 LEU CD1 C N N 256 LEU CD2 C N N 257 LEU OXT O N N 258 LEU H H N N 259 LEU H2 H N N 260 LEU HA H N N 261 LEU HB2 H N N 262 LEU HB3 H N N 263 LEU HG H N N 264 LEU HD11 H N N 265 LEU HD12 H N N 266 LEU HD13 H N N 267 LEU HD21 H N N 268 LEU HD22 H N N 269 LEU HD23 H N N 270 LEU HXT H N N 271 LYS N N N N 272 LYS CA C N S 273 LYS C C N N 274 LYS O O N N 275 LYS CB C N N 276 LYS CG C N N 277 LYS CD C N N 278 LYS CE C N N 279 LYS NZ N N N 280 LYS OXT O N N 281 LYS H H N N 282 LYS H2 H N N 283 LYS HA H N N 284 LYS HB2 H N N 285 LYS HB3 H N N 286 LYS HG2 H N N 287 LYS HG3 H N N 288 LYS HD2 H N N 289 LYS HD3 H N N 290 LYS HE2 H N N 291 LYS HE3 H N N 292 LYS HZ1 H N N 293 LYS HZ2 H N N 294 LYS HZ3 H N N 295 LYS HXT H N N 296 MET N N N N 297 MET CA C N S 298 MET C C N N 299 MET O O N N 300 MET CB C N N 301 MET CG C N N 302 MET SD S N N 303 MET CE C N N 304 MET OXT O N N 305 MET H H N N 306 MET H2 H N N 307 MET HA H N N 308 MET HB2 H N N 309 MET HB3 H N N 310 MET HG2 H N N 311 MET HG3 H N N 312 MET HE1 H N N 313 MET HE2 H N N 314 MET HE3 H N N 315 MET HXT H N N 316 MG MG MG N N 317 PHE N N N N 318 PHE CA C N S 319 PHE C C N N 320 PHE O O N N 321 PHE CB C N N 322 PHE CG C Y N 323 PHE CD1 C Y N 324 PHE CD2 C Y N 325 PHE CE1 C Y N 326 PHE CE2 C Y N 327 PHE CZ C Y N 328 PHE OXT O N N 329 PHE H H N N 330 PHE H2 H N N 331 PHE HA H N N 332 PHE HB2 H N N 333 PHE HB3 H N N 334 PHE HD1 H N N 335 PHE HD2 H N N 336 PHE HE1 H N N 337 PHE HE2 H N N 338 PHE HZ H N N 339 PHE HXT H N N 340 PRO N N N N 341 PRO CA C N S 342 PRO C C N N 343 PRO O O N N 344 PRO CB C N N 345 PRO CG C N N 346 PRO CD C N N 347 PRO OXT O N N 348 PRO H H N N 349 PRO HA H N N 350 PRO HB2 H N N 351 PRO HB3 H N N 352 PRO HG2 H N N 353 PRO HG3 H N N 354 PRO HD2 H N N 355 PRO HD3 H N N 356 PRO HXT H N N 357 SER N N N N 358 SER CA C N S 359 SER C C N N 360 SER O O N N 361 SER CB C N N 362 SER OG O N N 363 SER OXT O N N 364 SER H H N N 365 SER H2 H N N 366 SER HA H N N 367 SER HB2 H N N 368 SER HB3 H N N 369 SER HG H N N 370 SER HXT H N N 371 THR N N N N 372 THR CA C N S 373 THR C C N N 374 THR O O N N 375 THR CB C N R 376 THR OG1 O N N 377 THR CG2 C N N 378 THR OXT O N N 379 THR H H N N 380 THR H2 H N N 381 THR HA H N N 382 THR HB H N N 383 THR HG1 H N N 384 THR HG21 H N N 385 THR HG22 H N N 386 THR HG23 H N N 387 THR HXT H N N 388 TYR N N N N 389 TYR CA C N S 390 TYR C C N N 391 TYR O O N N 392 TYR CB C N N 393 TYR CG C Y N 394 TYR CD1 C Y N 395 TYR CD2 C Y N 396 TYR CE1 C Y N 397 TYR CE2 C Y N 398 TYR CZ C Y N 399 TYR OH O N N 400 TYR OXT O N N 401 TYR H H N N 402 TYR H2 H N N 403 TYR HA H N N 404 TYR HB2 H N N 405 TYR HB3 H N N 406 TYR HD1 H N N 407 TYR HD2 H N N 408 TYR HE1 H N N 409 TYR HE2 H N N 410 TYR HH H N N 411 TYR HXT H N N 412 VAL N N N N 413 VAL CA C N S 414 VAL C C N N 415 VAL O O N N 416 VAL CB C N N 417 VAL CG1 C N N 418 VAL CG2 C N N 419 VAL OXT O N N 420 VAL H H N N 421 VAL H2 H N N 422 VAL HA H N N 423 VAL HB H N N 424 VAL HG11 H N N 425 VAL HG12 H N N 426 VAL HG13 H N N 427 VAL HG21 H N N 428 VAL HG22 H N N 429 VAL HG23 H N N 430 VAL HXT H N N 431 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CAG PG O1G doub N N 70 CAG PG O2G sing N N 71 CAG PG O3G sing N N 72 CAG PG O3B sing N N 73 CAG O2G HOG2 sing N N 74 CAG O3G "C'" sing N N 75 CAG PB O1B doub N N 76 CAG PB O2B sing N N 77 CAG PB O3B sing N N 78 CAG PB O3A sing N N 79 CAG O2B HOB2 sing N N 80 CAG PA O1A doub N N 81 CAG PA O2A sing N N 82 CAG PA O3A sing N N 83 CAG PA "O5'" sing N N 84 CAG O2A HOA2 sing N N 85 CAG "O5'" C5B sing N N 86 CAG C5B C4B sing N N 87 CAG C5B "H5'1" sing N N 88 CAG C5B "H5'2" sing N N 89 CAG C4B "O4'" sing N N 90 CAG C4B C3B sing N N 91 CAG C4B H4B sing N N 92 CAG "O4'" C1B sing N N 93 CAG C3B "O3'" sing N N 94 CAG C3B C2B sing N N 95 CAG C3B H3B sing N N 96 CAG "O3'" HO3 sing N N 97 CAG C2B "O2'" sing N N 98 CAG C2B C1B sing N N 99 CAG C2B "H2'" sing N N 100 CAG "O2'" HO2 sing N N 101 CAG C1B N9 sing N N 102 CAG C1B "H1'" sing N N 103 CAG N9 C8 sing Y N 104 CAG N9 C4 sing Y N 105 CAG C8 N7 doub Y N 106 CAG C8 H8 sing N N 107 CAG N7 C5 sing Y N 108 CAG C5 C6 sing Y N 109 CAG C5 C4 doub Y N 110 CAG C6 O6 doub N N 111 CAG C6 N1 sing Y N 112 CAG N1 C2 sing Y N 113 CAG N1 H1 sing N N 114 CAG C2 N2 sing N N 115 CAG C2 N3 doub Y N 116 CAG N2 H21 sing N N 117 CAG N2 H22 sing N N 118 CAG N3 C4 sing Y N 119 CAG "C'" "CM'" sing N N 120 CAG "C'" "C1'" sing N N 121 CAG "C'" "H'" sing N N 122 CAG "CM'" HCM1 sing N N 123 CAG "CM'" HCM2 sing N N 124 CAG "CM'" HCM3 sing N N 125 CAG "C1'" "C2'" doub Y N 126 CAG "C1'" "C6'" sing Y N 127 CAG "C2'" "N2'" sing N N 128 CAG "C2'" "C3'" sing Y N 129 CAG "N2'" "O'L" sing N N 130 CAG "N2'" "O'M" doub N N 131 CAG "C3'" "C4'" doub Y N 132 CAG "C3'" "H3'" sing N N 133 CAG "C4'" "C5'" sing Y N 134 CAG "C4'" "H4'" sing N N 135 CAG "C5'" "C6'" doub Y N 136 CAG "C5'" "H5'" sing N N 137 CAG "C6'" "H6'" sing N N 138 CYS N CA sing N N 139 CYS N H sing N N 140 CYS N H2 sing N N 141 CYS CA C sing N N 142 CYS CA CB sing N N 143 CYS CA HA sing N N 144 CYS C O doub N N 145 CYS C OXT sing N N 146 CYS CB SG sing N N 147 CYS CB HB2 sing N N 148 CYS CB HB3 sing N N 149 CYS SG HG sing N N 150 CYS OXT HXT sing N N 151 GLN N CA sing N N 152 GLN N H sing N N 153 GLN N H2 sing N N 154 GLN CA C sing N N 155 GLN CA CB sing N N 156 GLN CA HA sing N N 157 GLN C O doub N N 158 GLN C OXT sing N N 159 GLN CB CG sing N N 160 GLN CB HB2 sing N N 161 GLN CB HB3 sing N N 162 GLN CG CD sing N N 163 GLN CG HG2 sing N N 164 GLN CG HG3 sing N N 165 GLN CD OE1 doub N N 166 GLN CD NE2 sing N N 167 GLN NE2 HE21 sing N N 168 GLN NE2 HE22 sing N N 169 GLN OXT HXT sing N N 170 GLU N CA sing N N 171 GLU N H sing N N 172 GLU N H2 sing N N 173 GLU CA C sing N N 174 GLU CA CB sing N N 175 GLU CA HA sing N N 176 GLU C O doub N N 177 GLU C OXT sing N N 178 GLU CB CG sing N N 179 GLU CB HB2 sing N N 180 GLU CB HB3 sing N N 181 GLU CG CD sing N N 182 GLU CG HG2 sing N N 183 GLU CG HG3 sing N N 184 GLU CD OE1 doub N N 185 GLU CD OE2 sing N N 186 GLU OE2 HE2 sing N N 187 GLU OXT HXT sing N N 188 GLY N CA sing N N 189 GLY N H sing N N 190 GLY N H2 sing N N 191 GLY CA C sing N N 192 GLY CA HA2 sing N N 193 GLY CA HA3 sing N N 194 GLY C O doub N N 195 GLY C OXT sing N N 196 GLY OXT HXT sing N N 197 HIS N CA sing N N 198 HIS N H sing N N 199 HIS N H2 sing N N 200 HIS CA C sing N N 201 HIS CA CB sing N N 202 HIS CA HA sing N N 203 HIS C O doub N N 204 HIS C OXT sing N N 205 HIS CB CG sing N N 206 HIS CB HB2 sing N N 207 HIS CB HB3 sing N N 208 HIS CG ND1 sing Y N 209 HIS CG CD2 doub Y N 210 HIS ND1 CE1 doub Y N 211 HIS ND1 HD1 sing N N 212 HIS CD2 NE2 sing Y N 213 HIS CD2 HD2 sing N N 214 HIS CE1 NE2 sing Y N 215 HIS CE1 HE1 sing N N 216 HIS NE2 HE2 sing N N 217 HIS OXT HXT sing N N 218 HOH O H1 sing N N 219 HOH O H2 sing N N 220 ILE N CA sing N N 221 ILE N H sing N N 222 ILE N H2 sing N N 223 ILE CA C sing N N 224 ILE CA CB sing N N 225 ILE CA HA sing N N 226 ILE C O doub N N 227 ILE C OXT sing N N 228 ILE CB CG1 sing N N 229 ILE CB CG2 sing N N 230 ILE CB HB sing N N 231 ILE CG1 CD1 sing N N 232 ILE CG1 HG12 sing N N 233 ILE CG1 HG13 sing N N 234 ILE CG2 HG21 sing N N 235 ILE CG2 HG22 sing N N 236 ILE CG2 HG23 sing N N 237 ILE CD1 HD11 sing N N 238 ILE CD1 HD12 sing N N 239 ILE CD1 HD13 sing N N 240 ILE OXT HXT sing N N 241 LEU N CA sing N N 242 LEU N H sing N N 243 LEU N H2 sing N N 244 LEU CA C sing N N 245 LEU CA CB sing N N 246 LEU CA HA sing N N 247 LEU C O doub N N 248 LEU C OXT sing N N 249 LEU CB CG sing N N 250 LEU CB HB2 sing N N 251 LEU CB HB3 sing N N 252 LEU CG CD1 sing N N 253 LEU CG CD2 sing N N 254 LEU CG HG sing N N 255 LEU CD1 HD11 sing N N 256 LEU CD1 HD12 sing N N 257 LEU CD1 HD13 sing N N 258 LEU CD2 HD21 sing N N 259 LEU CD2 HD22 sing N N 260 LEU CD2 HD23 sing N N 261 LEU OXT HXT sing N N 262 LYS N CA sing N N 263 LYS N H sing N N 264 LYS N H2 sing N N 265 LYS CA C sing N N 266 LYS CA CB sing N N 267 LYS CA HA sing N N 268 LYS C O doub N N 269 LYS C OXT sing N N 270 LYS CB CG sing N N 271 LYS CB HB2 sing N N 272 LYS CB HB3 sing N N 273 LYS CG CD sing N N 274 LYS CG HG2 sing N N 275 LYS CG HG3 sing N N 276 LYS CD CE sing N N 277 LYS CD HD2 sing N N 278 LYS CD HD3 sing N N 279 LYS CE NZ sing N N 280 LYS CE HE2 sing N N 281 LYS CE HE3 sing N N 282 LYS NZ HZ1 sing N N 283 LYS NZ HZ2 sing N N 284 LYS NZ HZ3 sing N N 285 LYS OXT HXT sing N N 286 MET N CA sing N N 287 MET N H sing N N 288 MET N H2 sing N N 289 MET CA C sing N N 290 MET CA CB sing N N 291 MET CA HA sing N N 292 MET C O doub N N 293 MET C OXT sing N N 294 MET CB CG sing N N 295 MET CB HB2 sing N N 296 MET CB HB3 sing N N 297 MET CG SD sing N N 298 MET CG HG2 sing N N 299 MET CG HG3 sing N N 300 MET SD CE sing N N 301 MET CE HE1 sing N N 302 MET CE HE2 sing N N 303 MET CE HE3 sing N N 304 MET OXT HXT sing N N 305 PHE N CA sing N N 306 PHE N H sing N N 307 PHE N H2 sing N N 308 PHE CA C sing N N 309 PHE CA CB sing N N 310 PHE CA HA sing N N 311 PHE C O doub N N 312 PHE C OXT sing N N 313 PHE CB CG sing N N 314 PHE CB HB2 sing N N 315 PHE CB HB3 sing N N 316 PHE CG CD1 doub Y N 317 PHE CG CD2 sing Y N 318 PHE CD1 CE1 sing Y N 319 PHE CD1 HD1 sing N N 320 PHE CD2 CE2 doub Y N 321 PHE CD2 HD2 sing N N 322 PHE CE1 CZ doub Y N 323 PHE CE1 HE1 sing N N 324 PHE CE2 CZ sing Y N 325 PHE CE2 HE2 sing N N 326 PHE CZ HZ sing N N 327 PHE OXT HXT sing N N 328 PRO N CA sing N N 329 PRO N CD sing N N 330 PRO N H sing N N 331 PRO CA C sing N N 332 PRO CA CB sing N N 333 PRO CA HA sing N N 334 PRO C O doub N N 335 PRO C OXT sing N N 336 PRO CB CG sing N N 337 PRO CB HB2 sing N N 338 PRO CB HB3 sing N N 339 PRO CG CD sing N N 340 PRO CG HG2 sing N N 341 PRO CG HG3 sing N N 342 PRO CD HD2 sing N N 343 PRO CD HD3 sing N N 344 PRO OXT HXT sing N N 345 SER N CA sing N N 346 SER N H sing N N 347 SER N H2 sing N N 348 SER CA C sing N N 349 SER CA CB sing N N 350 SER CA HA sing N N 351 SER C O doub N N 352 SER C OXT sing N N 353 SER CB OG sing N N 354 SER CB HB2 sing N N 355 SER CB HB3 sing N N 356 SER OG HG sing N N 357 SER OXT HXT sing N N 358 THR N CA sing N N 359 THR N H sing N N 360 THR N H2 sing N N 361 THR CA C sing N N 362 THR CA CB sing N N 363 THR CA HA sing N N 364 THR C O doub N N 365 THR C OXT sing N N 366 THR CB OG1 sing N N 367 THR CB CG2 sing N N 368 THR CB HB sing N N 369 THR OG1 HG1 sing N N 370 THR CG2 HG21 sing N N 371 THR CG2 HG22 sing N N 372 THR CG2 HG23 sing N N 373 THR OXT HXT sing N N 374 TYR N CA sing N N 375 TYR N H sing N N 376 TYR N H2 sing N N 377 TYR CA C sing N N 378 TYR CA CB sing N N 379 TYR CA HA sing N N 380 TYR C O doub N N 381 TYR C OXT sing N N 382 TYR CB CG sing N N 383 TYR CB HB2 sing N N 384 TYR CB HB3 sing N N 385 TYR CG CD1 doub Y N 386 TYR CG CD2 sing Y N 387 TYR CD1 CE1 sing Y N 388 TYR CD1 HD1 sing N N 389 TYR CD2 CE2 doub Y N 390 TYR CD2 HD2 sing N N 391 TYR CE1 CZ doub Y N 392 TYR CE1 HE1 sing N N 393 TYR CE2 CZ sing Y N 394 TYR CE2 HE2 sing N N 395 TYR CZ OH sing N N 396 TYR OH HH sing N N 397 TYR OXT HXT sing N N 398 VAL N CA sing N N 399 VAL N H sing N N 400 VAL N H2 sing N N 401 VAL CA C sing N N 402 VAL CA CB sing N N 403 VAL CA HA sing N N 404 VAL C O doub N N 405 VAL C OXT sing N N 406 VAL CB CG1 sing N N 407 VAL CB CG2 sing N N 408 VAL CB HB sing N N 409 VAL CG1 HG11 sing N N 410 VAL CG1 HG12 sing N N 411 VAL CG1 HG13 sing N N 412 VAL CG2 HG21 sing N N 413 VAL CG2 HG22 sing N N 414 VAL CG2 HG23 sing N N 415 VAL OXT HXT sing N N 416 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 22H04752 1 'Japan Society for the Promotion of Science (JSPS)' Japan 26293026 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3K8Y _pdbx_initial_refinement_model.details 'amino acid models of residue number 29-39, 61-74, and 96-109 are truncated' # _pdbx_serial_crystallography_data_reduction.diffrn_id 1 _pdbx_serial_crystallography_data_reduction.frames_total 54000 _pdbx_serial_crystallography_data_reduction.xfel_pulse_events ? _pdbx_serial_crystallography_data_reduction.frame_hits ? _pdbx_serial_crystallography_data_reduction.crystal_hits 16073 _pdbx_serial_crystallography_data_reduction.droplet_hits ? _pdbx_serial_crystallography_data_reduction.frames_failed_index 5513 _pdbx_serial_crystallography_data_reduction.frames_indexed 10560 _pdbx_serial_crystallography_data_reduction.lattices_indexed ? _pdbx_serial_crystallography_data_reduction.xfel_run_numbers ? _pdbx_serial_crystallography_data_reduction.lattices_merged ? # _pdbx_serial_crystallography_measurement.diffrn_id 1 _pdbx_serial_crystallography_measurement.pulse_energy ? _pdbx_serial_crystallography_measurement.pulse_duration ? _pdbx_serial_crystallography_measurement.xfel_pulse_repetition_rate ? _pdbx_serial_crystallography_measurement.pulse_photon_energy ? _pdbx_serial_crystallography_measurement.photons_per_pulse ? _pdbx_serial_crystallography_measurement.source_size ? _pdbx_serial_crystallography_measurement.source_distance ? _pdbx_serial_crystallography_measurement.focal_spot_size ? _pdbx_serial_crystallography_measurement.collimation 'Kirkpatrick-Baez mirros' _pdbx_serial_crystallography_measurement.collection_time_total 2 # _pdbx_serial_crystallography_sample_delivery.diffrn_id 1 _pdbx_serial_crystallography_sample_delivery.description 'fixed target' _pdbx_serial_crystallography_sample_delivery.method 'fixed target' # _pdbx_serial_crystallography_sample_delivery_fixed_target.diffrn_id 1 _pdbx_serial_crystallography_sample_delivery_fixed_target.description 'microcrystal suspension was fished by loop' _pdbx_serial_crystallography_sample_delivery_fixed_target.sample_holding 'microcrystals were holded with frozen cryoprotectant' _pdbx_serial_crystallography_sample_delivery_fixed_target.support_base goniometer _pdbx_serial_crystallography_sample_delivery_fixed_target.sample_unit_size 1000 _pdbx_serial_crystallography_sample_delivery_fixed_target.crystals_per_unit 10000 _pdbx_serial_crystallography_sample_delivery_fixed_target.sample_solvent '15% w/v PEG 8000, 0.166 M calcium acetate, 0.083 M MES pH 64, 16.6% v/v PEG 400' _pdbx_serial_crystallography_sample_delivery_fixed_target.sample_dehydration_prevention freezing _pdbx_serial_crystallography_sample_delivery_fixed_target.motion_control QKSU0 _pdbx_serial_crystallography_sample_delivery_fixed_target.velocity_horizontal 0.5 _pdbx_serial_crystallography_sample_delivery_fixed_target.velocity_vertical ? _pdbx_serial_crystallography_sample_delivery_fixed_target.details '0.25 degree rotation per frame' # _space_group.name_H-M_alt 'R 3 2 :H' _space_group.name_Hall ;R 3 2" ; _space_group.IT_number 155 _space_group.crystal_system trigonal _space_group.id 1 # _atom_sites.entry_id 9WRP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.010671 _atom_sites.fract_transf_matrix[1][2] 0.006161 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012322 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008230 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CA ? ? 16.26893 3.65395 ? ? 3.58509 77.28589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? 9.41153 2.53737 ? ? 2.59044 63.03566 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ #