HEADER TRANSFERASE 12-SEP-25 9WS5 TITLE CRYSTAL STRUCTURE OF PAK2 KINASE DOMAIN CONTAINING D368N MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAK-2P34; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SERINE/THREONINE-PROTEIN KINASE PAK 2,P34,C-T-PAK2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PAK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE FOLD, INACTIVE CONFORMATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.Y.CHEN,H.-F.HU,J.WANG,Z.P.LUO,J.-W.WU,Z.-X.WANG REVDAT 1 16-SEP-26 9WS5 0 JRNL AUTH F.Y.CHEN,H.-F.HU,J.WANG,Z.P.LUO,J.-W.WU,Z.-X.WANG JRNL TITL KINETIC AND STRUCTURAL INSIGHTS INTO THE AUTOACTIVATION OF JRNL TITL 2 PAK2 KINASE DOMAIN: A RESEARCH PARADIGM FOR STUDYING JRNL TITL 3 SELF-ACTIVATING ENZYME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 16599 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.838 REMARK 3 FREE R VALUE TEST SET COUNT : 803 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1122 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.4370 REMARK 3 BIN FREE R VALUE SET COUNT : 56 REMARK 3 BIN FREE R VALUE : 0.5540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2084 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.69800 REMARK 3 B22 (A**2) : -3.69800 REMARK 3 B33 (A**2) : 11.99700 REMARK 3 B12 (A**2) : -1.84900 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.318 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.235 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.276 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.582 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2142 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2103 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2894 ; 1.635 ; 1.837 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4868 ; 0.520 ; 1.759 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 268 ; 6.694 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 8 ; 5.135 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 402 ;13.475 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 338 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2428 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 418 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 475 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 63 ; 0.238 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1063 ; 0.186 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 44 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1078 ; 8.753 ; 8.119 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1078 ; 8.725 ; 8.117 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1344 ;13.110 ;14.565 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1345 ;13.105 ;14.566 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1064 ; 9.165 ; 8.742 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1057 ; 9.008 ; 8.728 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1550 ;14.248 ;15.808 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1545 ;14.269 ;15.789 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9WS5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 17-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1300063587. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16624 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA CITRATE, PH 6.5, 0.65 M REMARK 280 LI2SO4, 0.3 M (NH4)2SO4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.48100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 72.48100 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.48100 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 72.48100 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 72.48100 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 72.48100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 70 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 603 LIES ON A SPECIAL POSITION. REMARK 375 O2 SO4 A 603 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 202 REMARK 465 GLY A 203 REMARK 465 SER A 204 REMARK 465 SER A 205 REMARK 465 HIS A 206 REMARK 465 HIS A 207 REMARK 465 HIS A 208 REMARK 465 HIS A 209 REMARK 465 HIS A 210 REMARK 465 HIS A 211 REMARK 465 SER A 212 REMARK 465 GLN A 213 REMARK 465 ASP A 214 REMARK 465 LEU A 215 REMARK 465 GLU A 216 REMARK 465 VAL A 217 REMARK 465 LEU A 218 REMARK 465 PHE A 219 REMARK 465 GLN A 220 REMARK 465 GLY A 221 REMARK 465 PRO A 222 REMARK 465 HIS A 223 REMARK 465 MET A 224 REMARK 465 ALA A 225 REMARK 465 THR A 394 REMARK 465 PRO A 395 REMARK 465 GLU A 396 REMARK 465 GLN A 397 REMARK 465 SER A 398 REMARK 465 LYS A 399 REMARK 465 ARG A 400 REMARK 465 SER A 401 REMARK 465 THR A 402 REMARK 465 MET A 403 REMARK 465 VAL A 404 REMARK 465 GLY A 405 REMARK 465 THR A 406 REMARK 465 PRO A 407 REMARK 465 TYR A 408 REMARK 465 TRP A 409 REMARK 465 MET A 410 REMARK 465 ALA A 411 REMARK 465 PRO A 412 REMARK 465 GLU A 413 REMARK 465 VAL A 414 REMARK 465 VAL A 415 REMARK 465 THR A 416 REMARK 465 ARG A 417 REMARK 465 LYS A 418 REMARK 465 ALA A 419 REMARK 465 TYR A 420 REMARK 465 ASN A 523 REMARK 465 ARG A 524 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 449 CG CD1 CD2 REMARK 470 TYR A 453 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 454 CG CD1 CD2 REMARK 470 ILE A 455 CG1 CG2 CD1 REMARK 470 THR A 457 OG1 CG2 REMARK 470 ASN A 458 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 367 -0.83 81.30 REMARK 500 ASN A 368 34.83 -143.41 REMARK 500 LYS A 423 2.69 82.69 REMARK 500 ASN A 458 13.63 83.95 REMARK 500 GLU A 467 174.58 75.23 REMARK 500 REMARK 500 REMARK: NULL DBREF 9WS5 A 228 524 UNP Q13177 PAK2_HUMAN 228 524 SEQADV 9WS5 MET A 202 UNP Q13177 INITIATING METHIONINE SEQADV 9WS5 GLY A 203 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 SER A 204 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 SER A 205 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 HIS A 206 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 HIS A 207 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 HIS A 208 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 HIS A 209 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 HIS A 210 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 HIS A 211 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 SER A 212 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 GLN A 213 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 ASP A 214 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 LEU A 215 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 GLU A 216 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 VAL A 217 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 LEU A 218 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 PHE A 219 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 GLN A 220 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 GLY A 221 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 PRO A 222 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 HIS A 223 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 MET A 224 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 ALA A 225 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 ASP A 226 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 LEU A 227 UNP Q13177 EXPRESSION TAG SEQADV 9WS5 ASN A 368 UNP Q13177 ASP 368 ENGINEERED MUTATION SEQRES 1 A 323 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 323 LEU GLU VAL LEU PHE GLN GLY PRO HIS MET ALA ASP LEU SEQRES 3 A 323 THR ASP GLU GLU ILE MET GLU LYS LEU ARG THR ILE VAL SEQRES 4 A 323 SER ILE GLY ASP PRO LYS LYS LYS TYR THR ARG TYR GLU SEQRES 5 A 323 LYS ILE GLY GLN GLY ALA SER GLY THR VAL PHE THR ALA SEQRES 6 A 323 THR ASP VAL ALA LEU GLY GLN GLU VAL ALA ILE LYS GLN SEQRES 7 A 323 ILE ASN LEU GLN LYS GLN PRO LYS LYS GLU LEU ILE ILE SEQRES 8 A 323 ASN GLU ILE LEU VAL MET LYS GLU LEU LYS ASN PRO ASN SEQRES 9 A 323 ILE VAL ASN PHE LEU ASP SER TYR LEU VAL GLY ASP GLU SEQRES 10 A 323 LEU PHE VAL VAL MET GLU TYR LEU ALA GLY GLY SER LEU SEQRES 11 A 323 THR ASP VAL VAL THR GLU THR CYS MET ASP GLU ALA GLN SEQRES 12 A 323 ILE ALA ALA VAL CYS ARG GLU CYS LEU GLN ALA LEU GLU SEQRES 13 A 323 PHE LEU HIS ALA ASN GLN VAL ILE HIS ARG ASN ILE LYS SEQRES 14 A 323 SER ASP ASN VAL LEU LEU GLY MET GLU GLY SER VAL LYS SEQRES 15 A 323 LEU THR ASP PHE GLY PHE CYS ALA GLN ILE THR PRO GLU SEQRES 16 A 323 GLN SER LYS ARG SER THR MET VAL GLY THR PRO TYR TRP SEQRES 17 A 323 MET ALA PRO GLU VAL VAL THR ARG LYS ALA TYR GLY PRO SEQRES 18 A 323 LYS VAL ASP ILE TRP SER LEU GLY ILE MET ALA ILE GLU SEQRES 19 A 323 MET VAL GLU GLY GLU PRO PRO TYR LEU ASN GLU ASN PRO SEQRES 20 A 323 LEU ARG ALA LEU TYR LEU ILE ALA THR ASN GLY THR PRO SEQRES 21 A 323 GLU LEU GLN ASN PRO GLU LYS LEU SER PRO ILE PHE ARG SEQRES 22 A 323 ASP PHE LEU ASN ARG CYS LEU GLU MET ASP VAL GLU LYS SEQRES 23 A 323 ARG GLY SER ALA LYS GLU LEU LEU GLN HIS PRO PHE LEU SEQRES 24 A 323 LYS LEU ALA LYS PRO LEU SER SER LEU THR PRO LEU ILE SEQRES 25 A 323 MET ALA ALA LYS GLU ALA MET LYS SER ASN ARG HET CIT A 601 13 HET CIT A 602 13 HET SO4 A 603 5 HETNAM CIT CITRIC ACID HETNAM SO4 SULFATE ION FORMUL 2 CIT 2(C6 H8 O7) FORMUL 4 SO4 O4 S 2- HELIX 1 AA1 THR A 228 ARG A 237 1 10 HELIX 2 AA2 ASP A 244 LYS A 248 1 5 HELIX 3 AA3 LYS A 287 LEU A 301 1 15 HELIX 4 AA4 SER A 330 THR A 338 1 9 HELIX 5 AA5 ASP A 341 ASN A 362 1 22 HELIX 6 AA6 LYS A 370 ASP A 372 5 3 HELIX 7 AA7 LYS A 423 GLY A 439 1 17 HELIX 8 AA8 PRO A 442 ASN A 447 1 6 HELIX 9 AA9 ASN A 447 THR A 457 1 11 HELIX 10 AB1 GLY A 459 ASN A 465 1 7 HELIX 11 AB2 SER A 470 LEU A 481 1 12 HELIX 12 AB3 SER A 490 LEU A 495 1 6 HELIX 13 AB4 GLN A 496 ALA A 503 5 8 HELIX 14 AB5 PRO A 505 SER A 508 5 4 HELIX 15 AB6 LEU A 509 SER A 522 1 14 SHEET 1 AA1 5 TYR A 249 GLY A 258 0 SHEET 2 AA1 5 GLY A 261 ASP A 268 -1 O THR A 267 N THR A 250 SHEET 3 AA1 5 GLU A 274 ASN A 281 -1 O GLN A 279 N THR A 262 SHEET 4 AA1 5 GLU A 318 GLU A 324 -1 O LEU A 319 N ILE A 280 SHEET 5 AA1 5 PHE A 309 VAL A 315 -1 N LEU A 310 O VAL A 322 SHEET 1 AA2 2 VAL A 374 LEU A 376 0 SHEET 2 AA2 2 VAL A 382 LEU A 384 -1 O LYS A 383 N LEU A 375 CRYST1 97.529 97.529 144.962 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010253 0.005920 0.000000 0.00000 SCALE2 0.000000 0.011840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006898 0.00000 CONECT 2086 2087 2088 2089 CONECT 2087 2086 CONECT 2088 2086 CONECT 2089 2086 2090 CONECT 2090 2089 2091 2092 2096 CONECT 2091 2090 CONECT 2092 2090 2093 CONECT 2093 2092 2094 2095 CONECT 2094 2093 CONECT 2095 2093 CONECT 2096 2090 2097 2098 CONECT 2097 2096 CONECT 2098 2096 CONECT 2099 2100 2101 2102 CONECT 2100 2099 CONECT 2101 2099 CONECT 2102 2099 2103 CONECT 2103 2102 2104 2105 2109 CONECT 2104 2103 CONECT 2105 2103 2106 CONECT 2106 2105 2107 2108 CONECT 2107 2106 CONECT 2108 2106 CONECT 2109 2103 2110 2111 CONECT 2110 2109 CONECT 2111 2109 CONECT 2112 2113 2114 2115 2116 CONECT 2113 2112 CONECT 2114 2112 CONECT 2115 2112 CONECT 2116 2112 MASTER 375 0 3 15 7 0 0 6 2115 1 31 25 END