HEADER HYDROLASE 21-OCT-25 9X9R TITLE CHITODEXTRINASE CATALYTIC AND C-TERMINAL DOMAIN FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITODEXTRINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.14; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE M66-2; SOURCE 3 ORGANISM_TAXID: 579112; SOURCE 4 STRAIN: M66-2; SOURCE 5 GENE: VCM66_A0658; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SHUFFLE T7 KEYWDS CHITODEXTRINASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.KHUMNONKHRO,T.FUKAMIZO,R.C.ROBINSON,W.SUGINTA REVDAT 1 26-AUG-26 9X9R 0 JRNL AUTH K.KHUMNONKHRO,T.CHONGRUNGREANG,S.SAKUDA,R.C.ROBINSON, JRNL AUTH 2 T.FUKAMIZO,W.SUGINTA JRNL TITL STRUCTURE-BASED FUNCTIONALITY OF A MULTI-DOMAIN PERIPLASMIC JRNL TITL 2 CHITODEXTRINASE FROM MARINE BACTERIUM VIBRIO CHOLERAE. JRNL REF J.BIOL.CHEM. V. 302 13351 2026 JRNL REFN ESSN 1083-351X JRNL PMID 42480705 JRNL DOI 10.1016/J.JBC.2026.113351 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 11252 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.700 REMARK 3 FREE R VALUE TEST SET COUNT : 641 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 66.2700 - 5.9900 1.00 4070 264 0.2154 0.2303 REMARK 3 2 5.9800 - 4.7500 0.78 3043 185 0.2280 0.2763 REMARK 3 3 4.7500 - 4.1500 0.44 1703 115 0.2163 0.2803 REMARK 3 4 4.1500 - 3.7700 0.28 1099 47 0.2525 0.3248 REMARK 3 5 3.7700 - 3.5000 0.18 696 30 0.3083 0.2535 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.327 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.741 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5478 REMARK 3 ANGLE : 0.524 7456 REMARK 3 CHIRALITY : 0.043 766 REMARK 3 PLANARITY : 0.004 986 REMARK 3 DIHEDRAL : 4.646 756 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -47.7138 29.4311 -36.8960 REMARK 3 T TENSOR REMARK 3 T11: 0.5027 T22: 0.1786 REMARK 3 T33: 0.4508 T12: 0.1005 REMARK 3 T13: -0.1049 T23: 0.0420 REMARK 3 L TENSOR REMARK 3 L11: 0.9412 L22: 0.8757 REMARK 3 L33: 3.9530 L12: 0.2077 REMARK 3 L13: -0.5407 L23: -0.2804 REMARK 3 S TENSOR REMARK 3 S11: -0.0426 S12: -0.1429 S13: -0.1301 REMARK 3 S21: 0.0248 S22: -0.0298 S23: -0.1502 REMARK 3 S31: 0.0906 S32: 0.6107 S33: -0.0173 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9X9R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-OCT-25. REMARK 100 THE DEPOSITION ID IS D_1300063973. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AUTOPROC 1.0.5 (20240123) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13024 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.580 REMARK 200 RESOLUTION RANGE LOW (A) : 102.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : 19.10 REMARK 200 R MERGE (I) : 0.21000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 3.3 REMARK 200 DATA REDUNDANCY IN SHELL : 18.70 REMARK 200 R MERGE FOR SHELL (I) : 2.06000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: LONG FLAT PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM HEPES, 0.05M CADMIUM REMARK 280 SULFATE 8/3 HYDRATE, 1.0M SODIUM ACETATE TRIHYDRATE, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 132.53733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.26867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 66.26867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 132.53733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 VAL A 2 REMARK 465 ASP A 3 REMARK 465 CYS A 4 REMARK 465 SER A 5 REMARK 465 THR A 6 REMARK 465 LEU A 7 REMARK 465 PRO A 8 REMARK 465 GLU A 9 REMARK 465 TRP A 10 REMARK 465 GLN A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 ALA A 14 REMARK 465 VAL A 15 REMARK 465 TYR A 16 REMARK 465 THR A 17 REMARK 465 GLY A 18 REMARK 465 GLY A 19 REMARK 465 ALA A 20 REMARK 465 LYS A 21 REMARK 465 VAL A 22 REMARK 465 GLN A 23 REMARK 465 HIS A 24 REMARK 465 LYS A 25 REMARK 465 GLY A 26 REMARK 465 ASN A 27 REMARK 465 ALA A 28 REMARK 465 TYR A 29 REMARK 465 GLN A 30 REMARK 465 ALA A 31 REMARK 465 ASN A 32 REMARK 465 TYR A 33 REMARK 465 TRP A 34 REMARK 465 THR A 35 REMARK 465 GLN A 36 REMARK 465 ASN A 37 REMARK 465 ASN A 38 REMARK 465 ASP A 39 REMARK 465 PRO A 40 REMARK 465 GLU A 41 REMARK 465 THR A 42 REMARK 465 PHE A 43 REMARK 465 SER A 44 REMARK 465 GLY A 45 REMARK 465 ASN A 46 REMARK 465 TYR A 47 REMARK 465 ALA A 48 REMARK 465 GLN A 49 REMARK 465 TRP A 50 REMARK 465 LYS A 51 REMARK 465 LEU A 52 REMARK 465 LEU A 53 REMARK 465 ASP A 54 REMARK 465 SER A 55 REMARK 465 CYS A 56 REMARK 465 SER A 57 REMARK 465 THR A 58 REMARK 465 SER A 59 REMARK 465 GLY A 60 REMARK 465 GLY A 61 REMARK 465 THR A 62 REMARK 465 ASN A 63 REMARK 465 GLN A 64 REMARK 465 ALA A 65 REMARK 465 PRO A 66 REMARK 465 SER A 67 REMARK 465 VAL A 68 REMARK 465 THR A 69 REMARK 465 LEU A 70 REMARK 465 THR A 71 REMARK 465 ALA A 72 REMARK 465 PRO A 73 REMARK 465 LEU A 74 REMARK 465 ALA A 75 REMARK 465 THR A 76 REMARK 465 ALA A 77 REMARK 465 GLN A 78 REMARK 465 VAL A 79 REMARK 465 LYS A 80 REMARK 465 ALA A 81 REMARK 465 GLY A 82 REMARK 465 GLU A 83 REMARK 465 VAL A 84 REMARK 465 MET A 85 REMARK 465 THR A 86 REMARK 465 LEU A 87 REMARK 465 ALA A 88 REMARK 465 ALA A 89 REMARK 465 ASN A 90 REMARK 465 ALA A 91 REMARK 465 SER A 92 REMARK 465 ASP A 93 REMARK 465 ALA A 94 REMARK 465 ASP A 95 REMARK 465 GLY A 96 REMARK 465 SER A 97 REMARK 465 VAL A 98 REMARK 465 ALA A 99 REMARK 465 ARG A 100 REMARK 465 VAL A 101 REMARK 465 GLU A 102 REMARK 465 PHE A 103 REMARK 465 SER A 104 REMARK 465 VAL A 105 REMARK 465 ASP A 106 REMARK 465 GLY A 107 REMARK 465 VAL A 108 REMARK 465 LEU A 109 REMARK 465 VAL A 110 REMARK 465 GLY A 111 REMARK 465 GLN A 112 REMARK 465 ALA A 113 REMARK 465 THR A 114 REMARK 465 LYS A 115 REMARK 465 ALA A 116 REMARK 465 PRO A 117 REMARK 465 TYR A 118 REMARK 465 SER A 119 REMARK 465 ALA A 120 REMARK 465 SER A 121 REMARK 465 TRP A 122 REMARK 465 THR A 123 REMARK 465 ALA A 124 REMARK 465 THR A 125 REMARK 465 LYS A 126 REMARK 465 GLY A 127 REMARK 465 THR A 128 REMARK 465 HIS A 129 REMARK 465 GLU A 130 REMARK 465 PHE A 131 REMARK 465 SER A 132 REMARK 465 ALA A 133 REMARK 465 VAL A 134 REMARK 465 ALA A 135 REMARK 465 PHE A 136 REMARK 465 ASP A 137 REMARK 465 ASP A 138 REMARK 465 LYS A 139 REMARK 465 GLY A 140 REMARK 465 ALA A 141 REMARK 465 VAL A 142 REMARK 465 SER A 143 REMARK 465 THR A 144 REMARK 465 LYS A 145 REMARK 465 ASN A 146 REMARK 465 ALA A 147 REMARK 465 VAL A 148 REMARK 465 THR A 149 REMARK 465 LEU A 150 REMARK 465 THR A 151 REMARK 465 VAL A 152 REMARK 465 SER A 153 REMARK 465 ASP A 154 REMARK 465 ALA A 155 REMARK 465 GLY A 156 REMARK 465 PRO A 157 REMARK 465 ALA A 158 REMARK 465 ASN A 159 REMARK 465 GLN A 160 REMARK 465 ALA A 161 REMARK 465 PRO A 162 REMARK 465 THR A 163 REMARK 465 VAL A 164 REMARK 465 ALA A 165 REMARK 465 VAL A 166 REMARK 465 ALA A 167 REMARK 465 LEU A 168 REMARK 465 SER A 169 REMARK 465 ALA A 170 REMARK 465 SER A 171 REMARK 465 SER A 172 REMARK 465 VAL A 173 REMARK 465 ASP A 174 REMARK 465 VAL A 175 REMARK 465 GLY A 176 REMARK 465 THR A 177 REMARK 465 VAL A 178 REMARK 465 VAL A 179 REMARK 465 THR A 180 REMARK 465 LEU A 181 REMARK 465 SER A 182 REMARK 465 ALA A 183 REMARK 465 GLU A 184 REMARK 465 ALA A 185 REMARK 465 ALA A 186 REMARK 465 ASP A 187 REMARK 465 ALA A 188 REMARK 465 ASP A 189 REMARK 465 GLY A 190 REMARK 465 SER A 191 REMARK 465 VAL A 192 REMARK 465 GLU A 193 REMARK 465 LYS A 194 REMARK 465 VAL A 195 REMARK 465 ASP A 196 REMARK 465 PHE A 197 REMARK 465 TYR A 198 REMARK 465 VAL A 199 REMARK 465 GLY A 200 REMARK 465 GLY A 201 REMARK 465 ALA A 202 REMARK 465 LEU A 203 REMARK 465 VAL A 204 REMARK 465 GLY A 205 REMARK 465 THR A 206 REMARK 465 SER A 207 REMARK 465 ALA A 208 REMARK 465 LYS A 209 REMARK 465 ALA A 210 REMARK 465 PRO A 211 REMARK 465 TYR A 212 REMARK 465 THR A 213 REMARK 465 LEU A 214 REMARK 465 ASN A 215 REMARK 465 TYR A 216 REMARK 465 THR A 217 REMARK 465 ALA A 218 REMARK 465 THR A 219 REMARK 465 LYS A 220 REMARK 465 ALA A 221 REMARK 465 GLY A 222 REMARK 465 SER A 223 REMARK 465 LEU A 224 REMARK 465 ALA A 225 REMARK 465 VAL A 226 REMARK 465 TYR A 227 REMARK 465 ALA A 228 REMARK 465 ARG A 229 REMARK 465 ALA A 230 REMARK 465 THR A 231 REMARK 465 ASP A 232 REMARK 465 ASN A 233 REMARK 465 LEU A 234 REMARK 465 GLY A 235 REMARK 465 ALA A 236 REMARK 465 ALA A 237 REMARK 465 THR A 238 REMARK 465 ASP A 239 REMARK 465 SER A 240 REMARK 465 ALA A 241 REMARK 465 LEU A 242 REMARK 465 THR A 243 REMARK 465 THR A 244 REMARK 465 LEU A 245 REMARK 465 VAL A 246 REMARK 465 VAL A 247 REMARK 465 ASN A 248 REMARK 465 GLY A 249 REMARK 465 VAL A 250 REMARK 465 ALA A 251 REMARK 465 PRO A 252 REMARK 465 VAL A 253 REMARK 465 ALA A 254 REMARK 465 THR A 946 REMARK 465 ALA A 947 REMARK 465 GLY A 948 REMARK 465 GLY A 949 REMARK 465 ASN A 950 REMARK 465 THR A 951 REMARK 465 GLY A 952 REMARK 465 GLY A 953 REMARK 465 ASN A 954 REMARK 465 THR A 955 REMARK 465 GLY A 956 REMARK 465 GLY A 957 REMARK 465 ASN A 958 REMARK 465 THR A 959 REMARK 465 GLY A 960 REMARK 465 GLY A 961 REMARK 465 GLY A 962 REMARK 465 THR A 963 REMARK 465 GLY A 964 REMARK 465 GLY A 965 REMARK 465 GLY A 966 REMARK 465 SER A 967 REMARK 465 THR A 968 REMARK 465 GLY A 969 REMARK 465 ASP A 970 REMARK 465 VAL A 971 REMARK 465 ILE A 972 REMARK 465 GLN A 973 REMARK 465 TRP A 974 REMARK 465 VAL A 975 REMARK 465 PRO A 976 REMARK 465 GLY A 977 REMARK 465 SER A 978 REMARK 465 THR A 979 REMARK 465 GLN A 980 REMARK 465 VAL A 981 REMARK 465 GLN A 982 REMARK 465 ASN A 983 REMARK 465 GLY A 984 REMARK 465 THR A 985 REMARK 465 THR A 986 REMARK 465 VAL A 987 REMARK 465 THR A 988 REMARK 465 TYR A 989 REMARK 465 ASN A 990 REMARK 465 GLY A 991 REMARK 465 LYS A 992 REMARK 465 CYS A 993 REMARK 465 PHE A 994 REMARK 465 VAL A 995 REMARK 465 ALA A 996 REMARK 465 GLN A 997 REMARK 465 ASN A 998 REMARK 465 ASN A 999 REMARK 465 PRO A 1000 REMARK 465 GLY A 1001 REMARK 465 VAL A 1002 REMARK 465 TRP A 1003 REMARK 465 GLU A 1004 REMARK 465 SER A 1005 REMARK 465 PRO A 1006 REMARK 465 THR A 1007 REMARK 465 GLN A 1008 REMARK 465 SER A 1009 REMARK 465 ASN A 1010 REMARK 465 TRP A 1011 REMARK 465 PHE A 1012 REMARK 465 TRP A 1013 REMARK 465 LYS A 1014 REMARK 465 GLU A 1015 REMARK 465 VAL A 1016 REMARK 465 THR A 1017 REMARK 465 CYS A 1018 REMARK 465 PRO A 1019 REMARK 465 GLN A 1020 REMARK 465 ALA A 1021 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 278 -2.81 75.15 REMARK 500 SER A 297 -1.51 70.56 REMARK 500 GLU A 513 -128.07 59.51 REMARK 500 ASN A 618 -5.14 74.37 REMARK 500 GLN A 619 9.90 59.38 REMARK 500 GLU A 630 -74.02 62.07 REMARK 500 GLU A 765 19.00 59.02 REMARK 500 THR A 770 54.52 -91.38 REMARK 500 PRO A 919 -169.20 -75.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SASDXQ9 RELATED DB: SASBDB DBREF 9X9R A 1 1021 UNP C3LVW5 C3LVW5_VIBCM 31 1051 SEQRES 1 A 1021 ALA VAL ASP CYS SER THR LEU PRO GLU TRP GLN SER SER SEQRES 2 A 1021 ALA VAL TYR THR GLY GLY ALA LYS VAL GLN HIS LYS GLY SEQRES 3 A 1021 ASN ALA TYR GLN ALA ASN TYR TRP THR GLN ASN ASN ASP SEQRES 4 A 1021 PRO GLU THR PHE SER GLY ASN TYR ALA GLN TRP LYS LEU SEQRES 5 A 1021 LEU ASP SER CYS SER THR SER GLY GLY THR ASN GLN ALA SEQRES 6 A 1021 PRO SER VAL THR LEU THR ALA PRO LEU ALA THR ALA GLN SEQRES 7 A 1021 VAL LYS ALA GLY GLU VAL MET THR LEU ALA ALA ASN ALA SEQRES 8 A 1021 SER ASP ALA ASP GLY SER VAL ALA ARG VAL GLU PHE SER SEQRES 9 A 1021 VAL ASP GLY VAL LEU VAL GLY GLN ALA THR LYS ALA PRO SEQRES 10 A 1021 TYR SER ALA SER TRP THR ALA THR LYS GLY THR HIS GLU SEQRES 11 A 1021 PHE SER ALA VAL ALA PHE ASP ASP LYS GLY ALA VAL SER SEQRES 12 A 1021 THR LYS ASN ALA VAL THR LEU THR VAL SER ASP ALA GLY SEQRES 13 A 1021 PRO ALA ASN GLN ALA PRO THR VAL ALA VAL ALA LEU SER SEQRES 14 A 1021 ALA SER SER VAL ASP VAL GLY THR VAL VAL THR LEU SER SEQRES 15 A 1021 ALA GLU ALA ALA ASP ALA ASP GLY SER VAL GLU LYS VAL SEQRES 16 A 1021 ASP PHE TYR VAL GLY GLY ALA LEU VAL GLY THR SER ALA SEQRES 17 A 1021 LYS ALA PRO TYR THR LEU ASN TYR THR ALA THR LYS ALA SEQRES 18 A 1021 GLY SER LEU ALA VAL TYR ALA ARG ALA THR ASP ASN LEU SEQRES 19 A 1021 GLY ALA ALA THR ASP SER ALA LEU THR THR LEU VAL VAL SEQRES 20 A 1021 ASN GLY VAL ALA PRO VAL ALA ASN CYS ARG PRO ASP GLY SEQRES 21 A 1021 LEU TYR GLN THR GLU GLY VAL GLN VAL PRO TYR CYS THR SEQRES 22 A 1021 VAL TYR ASP ALA ASP GLY ARG GLU LYS MET GLY VAL ASP SEQRES 23 A 1021 HIS PRO ARG ARG VAL ILE GLY TYR PHE THR SER TRP ARG SEQRES 24 A 1021 SER GLY ASP ASP PRO GLN ALA ALA TYR LEU VAL LYS ASP SEQRES 25 A 1021 ILE PRO TRP GLU GLN LEU THR HIS ILE ASN TYR ALA PHE SEQRES 26 A 1021 VAL SER ILE GLY SER ASP GLY LYS VAL ASN VAL GLY ASP SEQRES 27 A 1021 VAL ASN ASP PRO ASN ASN ALA ALA VAL GLY LYS GLU TRP SEQRES 28 A 1021 PRO GLY VAL GLU ILE ASP PRO THR LEU GLY PHE LYS GLY SEQRES 29 A 1021 HIS PHE GLY ALA LEU ALA THR TYR LYS GLN LYS TYR GLY SEQRES 30 A 1021 VAL LYS THR LEU ILE SER ILE GLY GLY TRP ALA GLU THR SEQRES 31 A 1021 GLY GLY HIS PHE ASP ALA ASN GLY ASN ARG VAL ALA ASP SEQRES 32 A 1021 GLY GLY PHE TYR THR MET THR THR ASN ALA ASP GLY SER SEQRES 33 A 1021 ILE ASN HIS ALA ALA ILE GLU LYS PHE ALA ALA SER ALA SEQRES 34 A 1021 VAL GLU MET ILE ARG LYS TYR LYS PHE ASP GLY VAL ASP SEQRES 35 A 1021 ILE ASP TYR GLU TYR PRO THR SER MET ALA GLY ALA GLY SEQRES 36 A 1021 ASN PRO ASP ASP LYS GLY PHE MET GLU PRO ARG ARG ALA SEQRES 37 A 1021 TYR LEU TRP ALA SER TYR GLN GLU LEU MET ARG VAL LEU SEQRES 38 A 1021 ARG GLU LYS LEU ASP GLN ALA SER ALA GLN ASP GLY HIS SEQRES 39 A 1021 HIS TYR MET LEU THR ILE ALA ALA PRO SER SER GLY TYR SEQRES 40 A 1021 LEU LEU ARG GLY MET GLU THR PHE ASP VAL THR LYS TYR SEQRES 41 A 1021 LEU ASP TYR VAL ASN ILE MET SER TYR ASP LEU HIS GLY SEQRES 42 A 1021 ALA TRP ASN ASP HIS VAL GLY HIS ASN ALA ALA LEU TYR SEQRES 43 A 1021 ASP THR GLY LYS ASP SER GLU LEU ALA GLN TRP ASN VAL SEQRES 44 A 1021 TYR GLY THR ALA GLN TYR GLY GLY ILE GLY TYR LEU ASN SEQRES 45 A 1021 THR ASP TRP ALA TYR HIS TYR PHE ARG GLY SER MET PRO SEQRES 46 A 1021 ALA GLY ARG ILE ASN ILE GLY VAL PRO TYR TYR THR ARG SEQRES 47 A 1021 GLY TRP GLN GLY VAL THR GLY GLY GLU ASN GLY LEU TRP SEQRES 48 A 1021 GLY ARG ALA ALA LEU PRO ASN GLN ASN LEU CYS ALA PRO SEQRES 49 A 1021 GLY THR GLY GLU GLY GLU LYS ASN ASN CYS GLY HIS GLY SEQRES 50 A 1021 ALA THR GLY ILE ASP ASN MET TRP HIS ASP VAL ASN ALA SEQRES 51 A 1021 ALA GLY ASP GLU MET GLY ALA GLY SER ASN PRO MET TRP SEQRES 52 A 1021 HIS ALA LYS ASN LEU GLU LYS GLY ILE TRP GLY SER TYR SEQRES 53 A 1021 ALA ALA ALA TYR LYS LEU ASP PRO THR THR THR PRO LEU SEQRES 54 A 1021 ILE GLY THR TYR VAL ARG ASN TYR ASP SER VAL ALA VAL SEQRES 55 A 1021 ALA PRO TRP LEU TRP ASN ALA GLU LYS LYS VAL PHE LEU SEQRES 56 A 1021 SER THR GLU ASP LYS GLN SER ILE ASP VAL LYS ALA ASP SEQRES 57 A 1021 TYR VAL ILE ASP LYS GLU ILE GLY GLY ILE MET PHE TRP SEQRES 58 A 1021 GLU LEU ALA GLY ASP TYR SER CYS TYR ASN LEU ASP ALA SEQRES 59 A 1021 ASN GLY LYS ARG THR SER VAL ASP PRO SER GLU GLN ALA SEQRES 60 A 1021 CYS ALA THR GLY LYS GLY GLU TYR HIS MET GLY ASN THR SEQRES 61 A 1021 MET THR LYS ALA ILE TYR ASP LYS PHE LYS VAL ALA THR SEQRES 62 A 1021 PRO TYR GLY ASN LYS VAL ALA THR GLY ALA ILE PRO ALA SEQRES 63 A 1021 GLU ALA VAL ASN ILE ALA VAL LYS VAL GLY GLY PHE LYS SEQRES 64 A 1021 VAL GLY ASP GLN ASN TYR PRO ILE ASN PRO LYS ILE THR SEQRES 65 A 1021 PHE THR ASN ASN THR GLY ILE ASP ILE PRO GLY GLY THR SEQRES 66 A 1021 GLU PHE GLN PHE ASP ILE PRO VAL SER ALA PRO ASP ASN SEQRES 67 A 1021 ALA LYS ASP GLN SER GLY GLY GLY LEU LYS VAL ILE ALA SEQRES 68 A 1021 SER GLY HIS THR ARG ALA ASN ASN ILE GLY GLY LEU ASP SEQRES 69 A 1021 GLY THR MET HIS ARG VAL ALA PHE SER LEU PRO ALA TRP SEQRES 70 A 1021 LYS SER LEU PRO ALA GLY ALA THR TYR GLU LEU ASP MET SEQRES 71 A 1021 VAL TYR TYR LEU PRO ILE SER GLY PRO ALA ASN TYR THR SEQRES 72 A 1021 VAL LYS ILE ASN ASN VAL GLU TYR ALA PHE SER PHE GLU SEQRES 73 A 1021 GLN PRO ASP LEU PRO VAL ALA ASP LEU THR ALA GLY GLY SEQRES 74 A 1021 ASN THR GLY GLY ASN THR GLY GLY ASN THR GLY GLY GLY SEQRES 75 A 1021 THR GLY GLY GLY SER THR GLY ASP VAL ILE GLN TRP VAL SEQRES 76 A 1021 PRO GLY SER THR GLN VAL GLN ASN GLY THR THR VAL THR SEQRES 77 A 1021 TYR ASN GLY LYS CYS PHE VAL ALA GLN ASN ASN PRO GLY SEQRES 78 A 1021 VAL TRP GLU SER PRO THR GLN SER ASN TRP PHE TRP LYS SEQRES 79 A 1021 GLU VAL THR CYS PRO GLN ALA HET CD A1101 1 HET CD A1102 1 HET CD A1103 1 HET CD A1104 1 HET CD A1105 1 HET CD A1106 1 HET CD A1107 1 HET CD A1108 1 HET CD A1109 1 HET CD A1110 1 HET CD A1111 1 HET CD A1112 1 HETNAM CD CADMIUM ION FORMUL 2 CD 12(CD 2+) FORMUL 14 HOH *20(H2 O) HELIX 1 AA1 PRO A 270 VAL A 274 5 5 HELIX 2 AA2 ASP A 276 ARG A 280 5 5 HELIX 3 AA3 ASP A 303 ALA A 307 5 5 HELIX 4 AA4 LEU A 309 ILE A 313 5 5 HELIX 5 AA5 GLY A 364 LYS A 375 1 12 HELIX 6 AA6 GLY A 386 THR A 390 1 5 HELIX 7 AA7 GLY A 405 THR A 411 1 7 HELIX 8 AA8 ASN A 418 TYR A 436 1 19 HELIX 9 AA9 ASN A 456 LYS A 460 5 5 HELIX 10 AB1 MET A 463 PRO A 465 5 3 HELIX 11 AB2 ARG A 466 GLY A 493 1 28 HELIX 12 AB3 SER A 505 MET A 512 1 8 HELIX 13 AB4 PHE A 515 LEU A 521 5 7 HELIX 14 AB5 ASP A 551 TRP A 557 1 7 HELIX 15 AB6 THR A 562 GLY A 566 5 5 HELIX 16 AB7 ASN A 572 GLY A 582 1 11 HELIX 17 AB8 THR A 639 ASN A 643 5 5 HELIX 18 AB9 PRO A 661 LYS A 670 1 10 HELIX 19 AC1 GLY A 674 ALA A 679 5 6 HELIX 20 AC2 ASP A 719 LYS A 733 1 15 HELIX 21 AC3 GLU A 742 GLY A 745 5 4 HELIX 22 AC4 THR A 780 VAL A 791 1 12 HELIX 23 AC5 VAL A 820 ASN A 824 5 5 SHEET 1 AA110 VAL A 334 ASN A 335 0 SHEET 2 AA110 HIS A 320 ILE A 328 -1 N SER A 327 O ASN A 335 SHEET 3 AA110 LYS A 379 GLY A 385 1 O LEU A 381 N ILE A 321 SHEET 4 AA110 GLY A 440 ASP A 444 1 O ASP A 442 N ILE A 382 SHEET 5 AA110 MET A 497 PRO A 503 1 O THR A 499 N VAL A 441 SHEET 6 AA110 VAL A 524 MET A 527 1 O MET A 527 N ALA A 502 SHEET 7 AA110 ILE A 589 PRO A 594 1 O ASN A 590 N ILE A 526 SHEET 8 AA110 GLY A 737 TRP A 741 1 O MET A 739 N ILE A 591 SHEET 9 AA110 ARG A 290 PHE A 295 1 N TYR A 294 O PHE A 740 SHEET 10 AA110 HIS A 320 ILE A 328 1 O ASN A 322 N PHE A 295 SHEET 1 AA2 4 ARG A 598 TRP A 600 0 SHEET 2 AA2 4 VAL A 713 SER A 716 -1 O SER A 716 N ARG A 598 SHEET 3 AA2 4 ALA A 703 ASN A 708 -1 N LEU A 706 O LEU A 715 SHEET 4 AA2 4 VAL A 694 ASP A 698 -1 N ASP A 698 O ALA A 703 SHEET 1 AA3 2 VAL A 648 ASN A 649 0 SHEET 2 AA3 2 ASP A 653 GLU A 654 -1 O ASP A 653 N ASN A 649 SHEET 1 AA4 3 ARG A 758 VAL A 761 0 SHEET 2 AA4 3 TYR A 747 LEU A 752 -1 N ASN A 751 O THR A 759 SHEET 3 AA4 3 GLY A 773 MET A 777 -1 O GLU A 774 N TYR A 750 SHEET 1 AA5 6 ALA A 808 VAL A 809 0 SHEET 2 AA5 6 VAL A 929 PHE A 933 1 O ALA A 932 N VAL A 809 SHEET 3 AA5 6 ALA A 920 ILE A 926 -1 N VAL A 924 O TYR A 931 SHEET 4 AA5 6 PHE A 847 PRO A 852 -1 N GLN A 848 O THR A 923 SHEET 5 AA5 6 MET A 887 ALA A 891 -1 O VAL A 890 N PHE A 849 SHEET 6 AA5 6 LYS A 868 SER A 872 -1 N LYS A 868 O ALA A 891 SHEET 1 AA6 3 ILE A 811 LYS A 814 0 SHEET 2 AA6 3 THR A 832 ASN A 835 -1 O THR A 834 N ALA A 812 SHEET 3 AA6 3 THR A 905 GLU A 907 -1 O TYR A 906 N PHE A 833 SHEET 1 AA7 2 LYS A 860 ASP A 861 0 SHEET 2 AA7 2 MET A 910 VAL A 911 -1 O VAL A 911 N LYS A 860 SSBOND 1 CYS A 256 CYS A 272 1555 1555 2.03 SSBOND 2 CYS A 749 CYS A 768 1555 1555 2.03 CISPEP 1 ALA A 324 PHE A 325 0 -5.24 CISPEP 2 GLU A 446 TYR A 447 0 -3.89 CISPEP 3 TYR A 825 PRO A 826 0 -2.52 CISPEP 4 GLY A 918 PRO A 919 0 -3.46 CRYST1 118.119 118.119 198.806 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008466 0.004888 0.000000 0.00000 SCALE2 0.000000 0.009776 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005030 0.00000 CONECT 14 141 CONECT 141 14 CONECT 3860 4003 CONECT 4003 3860 MASTER 586 0 12 23 30 0 0 6 5350 1 4 79 END