data_9XGO # _entry.id 9XGO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9XGO pdb_00009xgo 10.2210/pdb9xgo/pdb WWPDB D_1300065277 ? ? EMDB EMD-66856 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-12-03 ? 2 'EM metadata' 1 0 2025-12-03 ? 3 'Additional map' 1 0 2025-12-03 1 4 FSC 1 0 2025-12-03 ? 5 'Half map' 1 0 2025-12-03 1 6 'Half map' 1 0 2025-12-03 2 7 Image 1 0 2025-12-03 ? 8 Mask 1 0 2025-12-03 1 9 'Primary map' 1 0 2025-12-03 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 FSC repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 Image repository 'Initial release' ? ? 8 8 Mask repository 'Initial release' ? ? 9 9 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9XGO _pdbx_database_status.recvd_initial_deposition_date 2025-10-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details ;Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain ; _pdbx_database_related.db_id EMD-66856 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 yunlongcao@pku.edu.cn yunlong cao ? 'principal investigator/group leader' 0000-0001-5918-1078 4 yunlongcao@pku.edu.cn junyu xiao ? 'principal investigator/group leader' 0000-0003-1822-1701 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, Z.Q.' 1 ? 'Niu, X.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Emerg Microbes Infect' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2222-1751 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 2412990 _citation.page_last ? _citation.title 'Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1080/22221751.2024.2412990 _citation.pdbx_database_id_PubMed 39361729 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Niu, X.' 1 ? primary 'Li, Z.' 2 ? primary 'Wang, J.' 3 ? primary 'Jian, F.' 4 ? primary 'Yu, Y.' 5 ? primary 'Song, W.' 6 ? primary 'Yisimayi, A.' 7 ? primary 'Du, S.' 8 ? primary 'Zhang, Z.' 9 ? primary 'Wang, Q.' 10 ? primary 'Wang, J.' 11 ? primary 'An, R.' 12 ? primary 'Wang, Y.' 13 ? primary 'Wang, P.' 14 ? primary 'Sun, H.' 15 ? primary 'Yu, L.' 16 ? primary 'Yang, S.' 17 ? primary 'Xiao, T.' 18 ? primary 'Gu, Q.' 19 ? primary 'Shao, F.' 20 ? primary 'Wang, Y.' 21 0000-0001-9769-5141 primary 'Xiao, J.' 22 ? primary 'Cao, Y.' 23 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BD58-0730 heavy chain' 13364.939 1 ? ? ? ? 2 polymer man 'BD58-0730 light chain' 11718.796 1 ? ? ? ? 3 polymer man 'Spike protein S1' 32433.465 1 ? ? ? ? 4 polymer man 'Spike glycoprotein' 25110.414 1 ? ? ? ? 5 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 7 ? ? ? ? # _entity_name_com.entity_id 4 _entity_name_com.name 'S glycoprotein,E2,Peplomer protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSNAQKFQGRVTMTRDTFTSTVYM ELSSLRSEDTAVYYCARDIARGIGEYYFDYWGQGTLVTVSS ; ;VQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSNAQKFQGRVTMTRDTFTSTVYM ELSSLRSEDTAVYYCARDIARGIGEYYFDYWGQGTLVTVSS ; H ? 2 'polypeptide(L)' no no ;QSALTQTASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVYKRPSGVSNRFSGSKSGNTASLTISGL QAEDEADYYCSSYTTSSTLLFGGGTKLTVLGQ ; ;QSALTQTASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVYKRPSGVSNRFSGSKSGNTASLTISGL QAEDEADYYCSSYTTSSTLLFGGGTKLTVLGQ ; L ? 3 'polypeptide(L)' no no ;CVNLITRTQSYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPALPFNDGVYFASTEK SNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDVYQKNNKSWMESEFRVYSSANNCTFEYVSQPFLMD LEGKEGNFKNLREFVFKNIDGYFKIYSKHTPINLERDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGW TAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTL ; ;CVNLITRTQSYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPALPFNDGVYFASTEK SNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDVYQKNNKSWMESEFRVYSSANNCTFEYVSQPFLMD LEGKEGNFKNLREFVFKNIDGYFKIYSKHTPINLERDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGW TAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTL ; N ? 4 'polypeptide(L)' no no ;TESIVRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVI RGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNG VAGPNCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNG ; ;TESIVRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVI RGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNG VAGPNCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNG ; R ? # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLN n 1 3 LEU n 1 4 VAL n 1 5 GLN n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 GLU n 1 10 VAL n 1 11 LYS n 1 12 LYS n 1 13 PRO n 1 14 GLY n 1 15 ALA n 1 16 SER n 1 17 VAL n 1 18 LYS n 1 19 VAL n 1 20 SER n 1 21 CYS n 1 22 LYS n 1 23 ALA n 1 24 SER n 1 25 GLY n 1 26 TYR n 1 27 THR n 1 28 PHE n 1 29 THR n 1 30 SER n 1 31 TYR n 1 32 TYR n 1 33 MET n 1 34 HIS n 1 35 TRP n 1 36 VAL n 1 37 ARG n 1 38 GLN n 1 39 ALA n 1 40 PRO n 1 41 GLY n 1 42 GLN n 1 43 GLY n 1 44 LEU n 1 45 GLU n 1 46 TRP n 1 47 MET n 1 48 GLY n 1 49 ILE n 1 50 ILE n 1 51 ASN n 1 52 PRO n 1 53 SER n 1 54 GLY n 1 55 GLY n 1 56 SER n 1 57 THR n 1 58 SER n 1 59 ASN n 1 60 ALA n 1 61 GLN n 1 62 LYS n 1 63 PHE n 1 64 GLN n 1 65 GLY n 1 66 ARG n 1 67 VAL n 1 68 THR n 1 69 MET n 1 70 THR n 1 71 ARG n 1 72 ASP n 1 73 THR n 1 74 PHE n 1 75 THR n 1 76 SER n 1 77 THR n 1 78 VAL n 1 79 TYR n 1 80 MET n 1 81 GLU n 1 82 LEU n 1 83 SER n 1 84 SER n 1 85 LEU n 1 86 ARG n 1 87 SER n 1 88 GLU n 1 89 ASP n 1 90 THR n 1 91 ALA n 1 92 VAL n 1 93 TYR n 1 94 TYR n 1 95 CYS n 1 96 ALA n 1 97 ARG n 1 98 ASP n 1 99 ILE n 1 100 ALA n 1 101 ARG n 1 102 GLY n 1 103 ILE n 1 104 GLY n 1 105 GLU n 1 106 TYR n 1 107 TYR n 1 108 PHE n 1 109 ASP n 1 110 TYR n 1 111 TRP n 1 112 GLY n 1 113 GLN n 1 114 GLY n 1 115 THR n 1 116 LEU n 1 117 VAL n 1 118 THR n 1 119 VAL n 1 120 SER n 1 121 SER n 2 1 GLN n 2 2 SER n 2 3 ALA n 2 4 LEU n 2 5 THR n 2 6 GLN n 2 7 THR n 2 8 ALA n 2 9 SER n 2 10 VAL n 2 11 SER n 2 12 GLY n 2 13 SER n 2 14 PRO n 2 15 GLY n 2 16 GLN n 2 17 SER n 2 18 ILE n 2 19 THR n 2 20 ILE n 2 21 SER n 2 22 CYS n 2 23 THR n 2 24 GLY n 2 25 THR n 2 26 SER n 2 27 SER n 2 28 ASP n 2 29 VAL n 2 30 GLY n 2 31 GLY n 2 32 TYR n 2 33 ASN n 2 34 TYR n 2 35 VAL n 2 36 SER n 2 37 TRP n 2 38 TYR n 2 39 GLN n 2 40 GLN n 2 41 HIS n 2 42 PRO n 2 43 GLY n 2 44 LYS n 2 45 ALA n 2 46 PRO n 2 47 LYS n 2 48 LEU n 2 49 MET n 2 50 ILE n 2 51 TYR n 2 52 ASP n 2 53 VAL n 2 54 TYR n 2 55 LYS n 2 56 ARG n 2 57 PRO n 2 58 SER n 2 59 GLY n 2 60 VAL n 2 61 SER n 2 62 ASN n 2 63 ARG n 2 64 PHE n 2 65 SER n 2 66 GLY n 2 67 SER n 2 68 LYS n 2 69 SER n 2 70 GLY n 2 71 ASN n 2 72 THR n 2 73 ALA n 2 74 SER n 2 75 LEU n 2 76 THR n 2 77 ILE n 2 78 SER n 2 79 GLY n 2 80 LEU n 2 81 GLN n 2 82 ALA n 2 83 GLU n 2 84 ASP n 2 85 GLU n 2 86 ALA n 2 87 ASP n 2 88 TYR n 2 89 TYR n 2 90 CYS n 2 91 SER n 2 92 SER n 2 93 TYR n 2 94 THR n 2 95 THR n 2 96 SER n 2 97 SER n 2 98 THR n 2 99 LEU n 2 100 LEU n 2 101 PHE n 2 102 GLY n 2 103 GLY n 2 104 GLY n 2 105 THR n 2 106 LYS n 2 107 LEU n 2 108 THR n 2 109 VAL n 2 110 LEU n 2 111 GLY n 2 112 GLN n 3 1 CYS n 3 2 VAL n 3 3 ASN n 3 4 LEU n 3 5 ILE n 3 6 THR n 3 7 ARG n 3 8 THR n 3 9 GLN n 3 10 SER n 3 11 TYR n 3 12 THR n 3 13 ASN n 3 14 SER n 3 15 PHE n 3 16 THR n 3 17 ARG n 3 18 GLY n 3 19 VAL n 3 20 TYR n 3 21 TYR n 3 22 PRO n 3 23 ASP n 3 24 LYS n 3 25 VAL n 3 26 PHE n 3 27 ARG n 3 28 SER n 3 29 SER n 3 30 VAL n 3 31 LEU n 3 32 HIS n 3 33 SER n 3 34 THR n 3 35 GLN n 3 36 ASP n 3 37 LEU n 3 38 PHE n 3 39 LEU n 3 40 PRO n 3 41 PHE n 3 42 PHE n 3 43 SER n 3 44 ASN n 3 45 VAL n 3 46 THR n 3 47 TRP n 3 48 PHE n 3 49 HIS n 3 50 ALA n 3 51 ILE n 3 52 HIS n 3 53 VAL n 3 54 SER n 3 55 GLY n 3 56 THR n 3 57 ASN n 3 58 GLY n 3 59 THR n 3 60 LYS n 3 61 ARG n 3 62 PHE n 3 63 ASP n 3 64 ASN n 3 65 PRO n 3 66 ALA n 3 67 LEU n 3 68 PRO n 3 69 PHE n 3 70 ASN n 3 71 ASP n 3 72 GLY n 3 73 VAL n 3 74 TYR n 3 75 PHE n 3 76 ALA n 3 77 SER n 3 78 THR n 3 79 GLU n 3 80 LYS n 3 81 SER n 3 82 ASN n 3 83 ILE n 3 84 ILE n 3 85 ARG n 3 86 GLY n 3 87 TRP n 3 88 ILE n 3 89 PHE n 3 90 GLY n 3 91 THR n 3 92 THR n 3 93 LEU n 3 94 ASP n 3 95 SER n 3 96 LYS n 3 97 THR n 3 98 GLN n 3 99 SER n 3 100 LEU n 3 101 LEU n 3 102 ILE n 3 103 VAL n 3 104 ASN n 3 105 ASN n 3 106 ALA n 3 107 THR n 3 108 ASN n 3 109 VAL n 3 110 VAL n 3 111 ILE n 3 112 LYS n 3 113 VAL n 3 114 CYS n 3 115 GLU n 3 116 PHE n 3 117 GLN n 3 118 PHE n 3 119 CYS n 3 120 ASN n 3 121 ASP n 3 122 PRO n 3 123 PHE n 3 124 LEU n 3 125 ASP n 3 126 VAL n 3 127 TYR n 3 128 GLN n 3 129 LYS n 3 130 ASN n 3 131 ASN n 3 132 LYS n 3 133 SER n 3 134 TRP n 3 135 MET n 3 136 GLU n 3 137 SER n 3 138 GLU n 3 139 PHE n 3 140 ARG n 3 141 VAL n 3 142 TYR n 3 143 SER n 3 144 SER n 3 145 ALA n 3 146 ASN n 3 147 ASN n 3 148 CYS n 3 149 THR n 3 150 PHE n 3 151 GLU n 3 152 TYR n 3 153 VAL n 3 154 SER n 3 155 GLN n 3 156 PRO n 3 157 PHE n 3 158 LEU n 3 159 MET n 3 160 ASP n 3 161 LEU n 3 162 GLU n 3 163 GLY n 3 164 LYS n 3 165 GLU n 3 166 GLY n 3 167 ASN n 3 168 PHE n 3 169 LYS n 3 170 ASN n 3 171 LEU n 3 172 ARG n 3 173 GLU n 3 174 PHE n 3 175 VAL n 3 176 PHE n 3 177 LYS n 3 178 ASN n 3 179 ILE n 3 180 ASP n 3 181 GLY n 3 182 TYR n 3 183 PHE n 3 184 LYS n 3 185 ILE n 3 186 TYR n 3 187 SER n 3 188 LYS n 3 189 HIS n 3 190 THR n 3 191 PRO n 3 192 ILE n 3 193 ASN n 3 194 LEU n 3 195 GLU n 3 196 ARG n 3 197 ASP n 3 198 LEU n 3 199 PRO n 3 200 GLN n 3 201 GLY n 3 202 PHE n 3 203 SER n 3 204 ALA n 3 205 LEU n 3 206 GLU n 3 207 PRO n 3 208 LEU n 3 209 VAL n 3 210 ASP n 3 211 LEU n 3 212 PRO n 3 213 ILE n 3 214 GLY n 3 215 ILE n 3 216 ASN n 3 217 ILE n 3 218 THR n 3 219 ARG n 3 220 PHE n 3 221 GLN n 3 222 THR n 3 223 LEU n 3 224 LEU n 3 225 ALA n 3 226 LEU n 3 227 HIS n 3 228 ARG n 3 229 SER n 3 230 TYR n 3 231 LEU n 3 232 THR n 3 233 PRO n 3 234 GLY n 3 235 ASP n 3 236 SER n 3 237 SER n 3 238 SER n 3 239 GLY n 3 240 TRP n 3 241 THR n 3 242 ALA n 3 243 GLY n 3 244 ALA n 3 245 ALA n 3 246 ALA n 3 247 TYR n 3 248 TYR n 3 249 VAL n 3 250 GLY n 3 251 TYR n 3 252 LEU n 3 253 GLN n 3 254 PRO n 3 255 ARG n 3 256 THR n 3 257 PHE n 3 258 LEU n 3 259 LEU n 3 260 LYS n 3 261 TYR n 3 262 ASN n 3 263 GLU n 3 264 ASN n 3 265 GLY n 3 266 THR n 3 267 ILE n 3 268 THR n 3 269 ASP n 3 270 ALA n 3 271 VAL n 3 272 ASP n 3 273 CYS n 3 274 ALA n 3 275 LEU n 3 276 ASP n 3 277 PRO n 3 278 LEU n 3 279 SER n 3 280 GLU n 3 281 THR n 3 282 LYS n 3 283 CYS n 3 284 THR n 3 285 LEU n 4 1 THR n 4 2 GLU n 4 3 SER n 4 4 ILE n 4 5 VAL n 4 6 ARG n 4 7 PHE n 4 8 PRO n 4 9 ASN n 4 10 ILE n 4 11 THR n 4 12 ASN n 4 13 LEU n 4 14 CYS n 4 15 PRO n 4 16 PHE n 4 17 HIS n 4 18 GLU n 4 19 VAL n 4 20 PHE n 4 21 ASN n 4 22 ALA n 4 23 THR n 4 24 THR n 4 25 PHE n 4 26 ALA n 4 27 SER n 4 28 VAL n 4 29 TYR n 4 30 ALA n 4 31 TRP n 4 32 ASN n 4 33 ARG n 4 34 LYS n 4 35 ARG n 4 36 ILE n 4 37 SER n 4 38 ASN n 4 39 CYS n 4 40 VAL n 4 41 ALA n 4 42 ASP n 4 43 TYR n 4 44 SER n 4 45 VAL n 4 46 ILE n 4 47 TYR n 4 48 ASN n 4 49 PHE n 4 50 ALA n 4 51 PRO n 4 52 PHE n 4 53 PHE n 4 54 ALA n 4 55 PHE n 4 56 LYS n 4 57 CYS n 4 58 TYR n 4 59 GLY n 4 60 VAL n 4 61 SER n 4 62 PRO n 4 63 THR n 4 64 LYS n 4 65 LEU n 4 66 ASN n 4 67 ASP n 4 68 LEU n 4 69 CYS n 4 70 PHE n 4 71 THR n 4 72 ASN n 4 73 VAL n 4 74 TYR n 4 75 ALA n 4 76 ASP n 4 77 SER n 4 78 PHE n 4 79 VAL n 4 80 ILE n 4 81 ARG n 4 82 GLY n 4 83 ASN n 4 84 GLU n 4 85 VAL n 4 86 SER n 4 87 GLN n 4 88 ILE n 4 89 ALA n 4 90 PRO n 4 91 GLY n 4 92 GLN n 4 93 THR n 4 94 GLY n 4 95 ASN n 4 96 ILE n 4 97 ALA n 4 98 ASP n 4 99 TYR n 4 100 ASN n 4 101 TYR n 4 102 LYS n 4 103 LEU n 4 104 PRO n 4 105 ASP n 4 106 ASP n 4 107 PHE n 4 108 THR n 4 109 GLY n 4 110 CYS n 4 111 VAL n 4 112 ILE n 4 113 ALA n 4 114 TRP n 4 115 ASN n 4 116 SER n 4 117 ASN n 4 118 LYS n 4 119 LEU n 4 120 ASP n 4 121 SER n 4 122 LYS n 4 123 PRO n 4 124 SER n 4 125 GLY n 4 126 ASN n 4 127 TYR n 4 128 ASN n 4 129 TYR n 4 130 LEU n 4 131 TYR n 4 132 ARG n 4 133 LEU n 4 134 PHE n 4 135 ARG n 4 136 LYS n 4 137 SER n 4 138 LYS n 4 139 LEU n 4 140 LYS n 4 141 PRO n 4 142 PHE n 4 143 GLU n 4 144 ARG n 4 145 ASP n 4 146 ILE n 4 147 SER n 4 148 THR n 4 149 GLU n 4 150 ILE n 4 151 TYR n 4 152 GLN n 4 153 ALA n 4 154 GLY n 4 155 ASN n 4 156 LYS n 4 157 PRO n 4 158 CYS n 4 159 ASN n 4 160 GLY n 4 161 VAL n 4 162 ALA n 4 163 GLY n 4 164 PRO n 4 165 ASN n 4 166 CYS n 4 167 TYR n 4 168 SER n 4 169 PRO n 4 170 LEU n 4 171 GLN n 4 172 SER n 4 173 TYR n 4 174 GLY n 4 175 PHE n 4 176 ARG n 4 177 PRO n 4 178 THR n 4 179 TYR n 4 180 GLY n 4 181 VAL n 4 182 GLY n 4 183 HIS n 4 184 GLN n 4 185 PRO n 4 186 TYR n 4 187 ARG n 4 188 VAL n 4 189 VAL n 4 190 VAL n 4 191 LEU n 4 192 SER n 4 193 PHE n 4 194 GLU n 4 195 LEU n 4 196 LEU n 4 197 HIS n 4 198 ALA n 4 199 PRO n 4 200 ALA n 4 201 THR n 4 202 VAL n 4 203 CYS n 4 204 GLY n 4 205 PRO n 4 206 LYS n 4 207 LYS n 4 208 SER n 4 209 THR n 4 210 ASN n 4 211 LEU n 4 212 VAL n 4 213 LYS n 4 214 ASN n 4 215 LYS n 4 216 CYS n 4 217 VAL n 4 218 ASN n 4 219 PHE n 4 220 ASN n 4 221 PHE n 4 222 ASN n 4 223 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 121 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 112 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 285 '2019-nCoV, SARS-CoV-2' ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 Omicron/XBB.1.5 ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 'Biological sequence' 1 223 '2019-nCoV, SARS-CoV-2' ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 Omicron/XBB.1.5 ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL H . n A 1 2 GLN 2 2 2 GLN GLN H . n A 1 3 LEU 3 3 3 LEU LEU H . n A 1 4 VAL 4 4 4 VAL VAL H . n A 1 5 GLN 5 5 5 GLN GLN H . n A 1 6 SER 6 6 6 SER SER H . n A 1 7 GLY 7 7 7 GLY GLY H . n A 1 8 ALA 8 8 8 ALA ALA H . n A 1 9 GLU 9 9 9 GLU GLU H . n A 1 10 VAL 10 10 10 VAL VAL H . n A 1 11 LYS 11 11 11 LYS LYS H . n A 1 12 LYS 12 12 12 LYS LYS H . n A 1 13 PRO 13 13 13 PRO PRO H . n A 1 14 GLY 14 14 14 GLY GLY H . n A 1 15 ALA 15 15 15 ALA ALA H . n A 1 16 SER 16 16 16 SER SER H . n A 1 17 VAL 17 17 17 VAL VAL H . n A 1 18 LYS 18 18 18 LYS LYS H . n A 1 19 VAL 19 19 19 VAL VAL H . n A 1 20 SER 20 20 20 SER SER H . n A 1 21 CYS 21 21 21 CYS CYS H . n A 1 22 LYS 22 22 22 LYS LYS H . n A 1 23 ALA 23 23 23 ALA ALA H . n A 1 24 SER 24 24 24 SER SER H . n A 1 25 GLY 25 25 25 GLY GLY H . n A 1 26 TYR 26 26 26 TYR TYR H . n A 1 27 THR 27 27 27 THR THR H . n A 1 28 PHE 28 28 28 PHE PHE H . n A 1 29 THR 29 29 29 THR THR H . n A 1 30 SER 30 30 30 SER SER H . n A 1 31 TYR 31 31 31 TYR TYR H . n A 1 32 TYR 32 32 32 TYR TYR H . n A 1 33 MET 33 33 33 MET MET H . n A 1 34 HIS 34 34 34 HIS HIS H . n A 1 35 TRP 35 35 35 TRP TRP H . n A 1 36 VAL 36 36 36 VAL VAL H . n A 1 37 ARG 37 37 37 ARG ARG H . n A 1 38 GLN 38 38 38 GLN GLN H . n A 1 39 ALA 39 39 39 ALA ALA H . n A 1 40 PRO 40 40 40 PRO PRO H . n A 1 41 GLY 41 41 41 GLY GLY H . n A 1 42 GLN 42 42 42 GLN GLN H . n A 1 43 GLY 43 43 43 GLY GLY H . n A 1 44 LEU 44 44 44 LEU LEU H . n A 1 45 GLU 45 45 45 GLU GLU H . n A 1 46 TRP 46 46 46 TRP TRP H . n A 1 47 MET 47 47 47 MET MET H . n A 1 48 GLY 48 48 48 GLY GLY H . n A 1 49 ILE 49 49 49 ILE ILE H . n A 1 50 ILE 50 50 50 ILE ILE H . n A 1 51 ASN 51 51 51 ASN ASN H . n A 1 52 PRO 52 52 52 PRO PRO H . n A 1 53 SER 53 53 53 SER SER H . n A 1 54 GLY 54 54 54 GLY GLY H . n A 1 55 GLY 55 55 55 GLY GLY H . n A 1 56 SER 56 56 56 SER SER H . n A 1 57 THR 57 57 57 THR THR H . n A 1 58 SER 58 58 58 SER SER H . n A 1 59 ASN 59 59 59 ASN ASN H . n A 1 60 ALA 60 60 60 ALA ALA H . n A 1 61 GLN 61 61 61 GLN GLN H . n A 1 62 LYS 62 62 62 LYS LYS H . n A 1 63 PHE 63 63 63 PHE PHE H . n A 1 64 GLN 64 64 64 GLN GLN H . n A 1 65 GLY 65 65 65 GLY GLY H . n A 1 66 ARG 66 66 66 ARG ARG H . n A 1 67 VAL 67 67 67 VAL VAL H . n A 1 68 THR 68 68 68 THR THR H . n A 1 69 MET 69 69 69 MET MET H . n A 1 70 THR 70 70 70 THR THR H . n A 1 71 ARG 71 71 71 ARG ARG H . n A 1 72 ASP 72 72 72 ASP ASP H . n A 1 73 THR 73 73 73 THR THR H . n A 1 74 PHE 74 74 74 PHE PHE H . n A 1 75 THR 75 75 75 THR THR H . n A 1 76 SER 76 76 76 SER SER H . n A 1 77 THR 77 77 77 THR THR H . n A 1 78 VAL 78 78 78 VAL VAL H . n A 1 79 TYR 79 79 79 TYR TYR H . n A 1 80 MET 80 80 80 MET MET H . n A 1 81 GLU 81 81 81 GLU GLU H . n A 1 82 LEU 82 82 82 LEU LEU H . n A 1 83 SER 83 83 83 SER SER H . n A 1 84 SER 84 84 84 SER SER H . n A 1 85 LEU 85 85 85 LEU LEU H . n A 1 86 ARG 86 86 86 ARG ARG H . n A 1 87 SER 87 87 87 SER SER H . n A 1 88 GLU 88 88 88 GLU GLU H . n A 1 89 ASP 89 89 89 ASP ASP H . n A 1 90 THR 90 90 90 THR THR H . n A 1 91 ALA 91 91 91 ALA ALA H . n A 1 92 VAL 92 92 92 VAL VAL H . n A 1 93 TYR 93 93 93 TYR TYR H . n A 1 94 TYR 94 94 94 TYR TYR H . n A 1 95 CYS 95 95 95 CYS CYS H . n A 1 96 ALA 96 96 96 ALA ALA H . n A 1 97 ARG 97 97 97 ARG ARG H . n A 1 98 ASP 98 98 98 ASP ASP H . n A 1 99 ILE 99 99 99 ILE ILE H . n A 1 100 ALA 100 100 100 ALA ALA H . n A 1 101 ARG 101 101 101 ARG ARG H . n A 1 102 GLY 102 102 102 GLY GLY H . n A 1 103 ILE 103 103 103 ILE ILE H . n A 1 104 GLY 104 104 104 GLY GLY H . n A 1 105 GLU 105 105 105 GLU GLU H . n A 1 106 TYR 106 106 106 TYR TYR H . n A 1 107 TYR 107 107 107 TYR TYR H . n A 1 108 PHE 108 108 108 PHE PHE H . n A 1 109 ASP 109 109 109 ASP ASP H . n A 1 110 TYR 110 110 110 TYR TYR H . n A 1 111 TRP 111 111 111 TRP TRP H . n A 1 112 GLY 112 112 112 GLY GLY H . n A 1 113 GLN 113 113 113 GLN GLN H . n A 1 114 GLY 114 114 114 GLY GLY H . n A 1 115 THR 115 115 115 THR THR H . n A 1 116 LEU 116 116 116 LEU LEU H . n A 1 117 VAL 117 117 117 VAL VAL H . n A 1 118 THR 118 118 118 THR THR H . n A 1 119 VAL 119 119 119 VAL VAL H . n A 1 120 SER 120 120 120 SER SER H . n A 1 121 SER 121 121 121 SER SER H . n B 2 1 GLN 1 1 1 GLN GLN L . n B 2 2 SER 2 2 2 SER SER L . n B 2 3 ALA 3 3 3 ALA ALA L . n B 2 4 LEU 4 4 4 LEU LEU L . n B 2 5 THR 5 5 5 THR THR L . n B 2 6 GLN 6 6 6 GLN GLN L . n B 2 7 THR 7 7 7 THR THR L . n B 2 8 ALA 8 8 8 ALA ALA L . n B 2 9 SER 9 9 9 SER SER L . n B 2 10 VAL 10 10 10 VAL VAL L . n B 2 11 SER 11 11 11 SER SER L . n B 2 12 GLY 12 12 12 GLY GLY L . n B 2 13 SER 13 13 13 SER SER L . n B 2 14 PRO 14 14 14 PRO PRO L . n B 2 15 GLY 15 15 15 GLY GLY L . n B 2 16 GLN 16 16 16 GLN GLN L . n B 2 17 SER 17 17 17 SER SER L . n B 2 18 ILE 18 18 18 ILE ILE L . n B 2 19 THR 19 19 19 THR THR L . n B 2 20 ILE 20 20 20 ILE ILE L . n B 2 21 SER 21 21 21 SER SER L . n B 2 22 CYS 22 22 22 CYS CYS L . n B 2 23 THR 23 23 23 THR THR L . n B 2 24 GLY 24 24 24 GLY GLY L . n B 2 25 THR 25 25 25 THR THR L . n B 2 26 SER 26 26 26 SER SER L . n B 2 27 SER 27 27 27 SER SER L . n B 2 28 ASP 28 28 28 ASP ASP L . n B 2 29 VAL 29 29 29 VAL VAL L . n B 2 30 GLY 30 30 30 GLY GLY L . n B 2 31 GLY 31 31 31 GLY GLY L . n B 2 32 TYR 32 32 32 TYR TYR L . n B 2 33 ASN 33 33 33 ASN ASN L . n B 2 34 TYR 34 34 34 TYR TYR L . n B 2 35 VAL 35 35 35 VAL VAL L . n B 2 36 SER 36 36 36 SER SER L . n B 2 37 TRP 37 37 37 TRP TRP L . n B 2 38 TYR 38 38 38 TYR TYR L . n B 2 39 GLN 39 39 39 GLN GLN L . n B 2 40 GLN 40 40 40 GLN GLN L . n B 2 41 HIS 41 41 41 HIS HIS L . n B 2 42 PRO 42 42 42 PRO PRO L . n B 2 43 GLY 43 43 43 GLY GLY L . n B 2 44 LYS 44 44 44 LYS LYS L . n B 2 45 ALA 45 45 45 ALA ALA L . n B 2 46 PRO 46 46 46 PRO PRO L . n B 2 47 LYS 47 47 47 LYS LYS L . n B 2 48 LEU 48 48 48 LEU LEU L . n B 2 49 MET 49 49 49 MET MET L . n B 2 50 ILE 50 50 50 ILE ILE L . n B 2 51 TYR 51 51 51 TYR TYR L . n B 2 52 ASP 52 52 52 ASP ASP L . n B 2 53 VAL 53 53 53 VAL VAL L . n B 2 54 TYR 54 54 54 TYR TYR L . n B 2 55 LYS 55 55 55 LYS LYS L . n B 2 56 ARG 56 56 56 ARG ARG L . n B 2 57 PRO 57 57 57 PRO PRO L . n B 2 58 SER 58 58 58 SER SER L . n B 2 59 GLY 59 59 59 GLY GLY L . n B 2 60 VAL 60 60 60 VAL VAL L . n B 2 61 SER 61 61 61 SER SER L . n B 2 62 ASN 62 62 62 ASN ASN L . n B 2 63 ARG 63 63 63 ARG ARG L . n B 2 64 PHE 64 64 64 PHE PHE L . n B 2 65 SER 65 65 65 SER SER L . n B 2 66 GLY 66 66 66 GLY GLY L . n B 2 67 SER 67 67 67 SER SER L . n B 2 68 LYS 68 68 68 LYS LYS L . n B 2 69 SER 69 69 69 SER SER L . n B 2 70 GLY 70 70 70 GLY GLY L . n B 2 71 ASN 71 71 71 ASN ASN L . n B 2 72 THR 72 72 72 THR THR L . n B 2 73 ALA 73 73 73 ALA ALA L . n B 2 74 SER 74 74 74 SER SER L . n B 2 75 LEU 75 75 75 LEU LEU L . n B 2 76 THR 76 76 76 THR THR L . n B 2 77 ILE 77 77 77 ILE ILE L . n B 2 78 SER 78 78 78 SER SER L . n B 2 79 GLY 79 79 79 GLY GLY L . n B 2 80 LEU 80 80 80 LEU LEU L . n B 2 81 GLN 81 81 81 GLN GLN L . n B 2 82 ALA 82 82 82 ALA ALA L . n B 2 83 GLU 83 83 83 GLU GLU L . n B 2 84 ASP 84 84 84 ASP ASP L . n B 2 85 GLU 85 85 85 GLU GLU L . n B 2 86 ALA 86 86 86 ALA ALA L . n B 2 87 ASP 87 87 87 ASP ASP L . n B 2 88 TYR 88 88 88 TYR TYR L . n B 2 89 TYR 89 89 89 TYR TYR L . n B 2 90 CYS 90 90 90 CYS CYS L . n B 2 91 SER 91 91 91 SER SER L . n B 2 92 SER 92 92 92 SER SER L . n B 2 93 TYR 93 93 93 TYR TYR L . n B 2 94 THR 94 94 94 THR THR L . n B 2 95 THR 95 95 95 THR THR L . n B 2 96 SER 96 96 96 SER SER L . n B 2 97 SER 97 97 97 SER SER L . n B 2 98 THR 98 98 98 THR THR L . n B 2 99 LEU 99 99 99 LEU LEU L . n B 2 100 LEU 100 100 100 LEU LEU L . n B 2 101 PHE 101 101 101 PHE PHE L . n B 2 102 GLY 102 102 102 GLY GLY L . n B 2 103 GLY 103 103 103 GLY GLY L . n B 2 104 GLY 104 104 104 GLY GLY L . n B 2 105 THR 105 105 105 THR THR L . n B 2 106 LYS 106 106 106 LYS LYS L . n B 2 107 LEU 107 107 107 LEU LEU L . n B 2 108 THR 108 108 108 THR THR L . n B 2 109 VAL 109 109 109 VAL VAL L . n B 2 110 LEU 110 110 110 LEU LEU L . n B 2 111 GLY 111 111 111 GLY GLY L . n B 2 112 GLN 112 112 112 GLN GLN L . n C 3 1 CYS 1 15 15 CYS CYS N . n C 3 2 VAL 2 16 16 VAL VAL N . n C 3 3 ASN 3 17 17 ASN ASN N . n C 3 4 LEU 4 18 18 LEU LEU N . n C 3 5 ILE 5 19 19 ILE ILE N . n C 3 6 THR 6 20 20 THR THR N . n C 3 7 ARG 7 21 21 ARG ARG N . n C 3 8 THR 8 22 22 THR THR N . n C 3 9 GLN 9 23 23 GLN GLN N . n C 3 10 SER 10 27 27 SER SER N . n C 3 11 TYR 11 28 28 TYR TYR N . n C 3 12 THR 12 29 29 THR THR N . n C 3 13 ASN 13 30 30 ASN ASN N . n C 3 14 SER 14 31 31 SER SER N . n C 3 15 PHE 15 32 32 PHE PHE N . n C 3 16 THR 16 33 33 THR THR N . n C 3 17 ARG 17 34 34 ARG ARG N . n C 3 18 GLY 18 35 35 GLY GLY N . n C 3 19 VAL 19 36 36 VAL VAL N . n C 3 20 TYR 20 37 37 TYR TYR N . n C 3 21 TYR 21 38 38 TYR TYR N . n C 3 22 PRO 22 39 39 PRO PRO N . n C 3 23 ASP 23 40 40 ASP ASP N . n C 3 24 LYS 24 41 41 LYS LYS N . n C 3 25 VAL 25 42 42 VAL VAL N . n C 3 26 PHE 26 43 43 PHE PHE N . n C 3 27 ARG 27 44 44 ARG ARG N . n C 3 28 SER 28 45 45 SER SER N . n C 3 29 SER 29 46 46 SER SER N . n C 3 30 VAL 30 47 47 VAL VAL N . n C 3 31 LEU 31 48 48 LEU LEU N . n C 3 32 HIS 32 49 49 HIS HIS N . n C 3 33 SER 33 50 50 SER SER N . n C 3 34 THR 34 51 51 THR THR N . n C 3 35 GLN 35 52 52 GLN GLN N . n C 3 36 ASP 36 53 53 ASP ASP N . n C 3 37 LEU 37 54 54 LEU LEU N . n C 3 38 PHE 38 55 55 PHE PHE N . n C 3 39 LEU 39 56 56 LEU LEU N . n C 3 40 PRO 40 57 57 PRO PRO N . n C 3 41 PHE 41 58 58 PHE PHE N . n C 3 42 PHE 42 59 59 PHE PHE N . n C 3 43 SER 43 60 60 SER SER N . n C 3 44 ASN 44 61 61 ASN ASN N . n C 3 45 VAL 45 62 62 VAL VAL N . n C 3 46 THR 46 63 63 THR THR N . n C 3 47 TRP 47 64 64 TRP TRP N . n C 3 48 PHE 48 65 65 PHE PHE N . n C 3 49 HIS 49 66 66 HIS HIS N . n C 3 50 ALA 50 67 67 ALA ALA N . n C 3 51 ILE 51 68 68 ILE ILE N . n C 3 52 HIS 52 69 69 HIS HIS N . n C 3 53 VAL 53 70 70 VAL VAL N . n C 3 54 SER 54 71 71 SER SER N . n C 3 55 GLY 55 72 72 GLY GLY N . n C 3 56 THR 56 73 73 THR THR N . n C 3 57 ASN 57 74 74 ASN ASN N . n C 3 58 GLY 58 75 75 GLY GLY N . n C 3 59 THR 59 76 76 THR THR N . n C 3 60 LYS 60 77 77 LYS LYS N . n C 3 61 ARG 61 78 78 ARG ARG N . n C 3 62 PHE 62 79 79 PHE PHE N . n C 3 63 ASP 63 80 80 ASP ASP N . n C 3 64 ASN 64 81 81 ASN ASN N . n C 3 65 PRO 65 82 82 PRO PRO N . n C 3 66 ALA 66 83 83 ALA ALA N . n C 3 67 LEU 67 84 84 LEU LEU N . n C 3 68 PRO 68 85 85 PRO PRO N . n C 3 69 PHE 69 86 86 PHE PHE N . n C 3 70 ASN 70 87 87 ASN ASN N . n C 3 71 ASP 71 88 88 ASP ASP N . n C 3 72 GLY 72 89 89 GLY GLY N . n C 3 73 VAL 73 90 90 VAL VAL N . n C 3 74 TYR 74 91 91 TYR TYR N . n C 3 75 PHE 75 92 92 PHE PHE N . n C 3 76 ALA 76 93 93 ALA ALA N . n C 3 77 SER 77 94 94 SER SER N . n C 3 78 THR 78 95 95 THR THR N . n C 3 79 GLU 79 96 96 GLU GLU N . n C 3 80 LYS 80 97 97 LYS LYS N . n C 3 81 SER 81 98 98 SER SER N . n C 3 82 ASN 82 99 99 ASN ASN N . n C 3 83 ILE 83 100 100 ILE ILE N . n C 3 84 ILE 84 101 101 ILE ILE N . n C 3 85 ARG 85 102 102 ARG ARG N . n C 3 86 GLY 86 103 103 GLY GLY N . n C 3 87 TRP 87 104 104 TRP TRP N . n C 3 88 ILE 88 105 105 ILE ILE N . n C 3 89 PHE 89 106 106 PHE PHE N . n C 3 90 GLY 90 107 107 GLY GLY N . n C 3 91 THR 91 108 108 THR THR N . n C 3 92 THR 92 109 109 THR THR N . n C 3 93 LEU 93 110 110 LEU LEU N . n C 3 94 ASP 94 111 111 ASP ASP N . n C 3 95 SER 95 112 112 SER SER N . n C 3 96 LYS 96 113 113 LYS LYS N . n C 3 97 THR 97 114 114 THR THR N . n C 3 98 GLN 98 115 115 GLN GLN N . n C 3 99 SER 99 116 116 SER SER N . n C 3 100 LEU 100 117 117 LEU LEU N . n C 3 101 LEU 101 118 118 LEU LEU N . n C 3 102 ILE 102 119 119 ILE ILE N . n C 3 103 VAL 103 120 120 VAL VAL N . n C 3 104 ASN 104 121 121 ASN ASN N . n C 3 105 ASN 105 122 122 ASN ASN N . n C 3 106 ALA 106 123 123 ALA ALA N . n C 3 107 THR 107 124 124 THR THR N . n C 3 108 ASN 108 125 125 ASN ASN N . n C 3 109 VAL 109 126 126 VAL VAL N . n C 3 110 VAL 110 127 127 VAL VAL N . n C 3 111 ILE 111 128 128 ILE ILE N . n C 3 112 LYS 112 129 129 LYS LYS N . n C 3 113 VAL 113 130 130 VAL VAL N . n C 3 114 CYS 114 131 131 CYS CYS N . n C 3 115 GLU 115 132 132 GLU GLU N . n C 3 116 PHE 116 133 133 PHE PHE N . n C 3 117 GLN 117 134 134 GLN GLN N . n C 3 118 PHE 118 135 135 PHE PHE N . n C 3 119 CYS 119 136 136 CYS CYS N . n C 3 120 ASN 120 137 137 ASN ASN N . n C 3 121 ASP 121 138 138 ASP ASP N . n C 3 122 PRO 122 139 139 PRO PRO N . n C 3 123 PHE 123 140 140 PHE PHE N . n C 3 124 LEU 124 141 141 LEU LEU N . n C 3 125 ASP 125 142 142 ASP ASP N . n C 3 126 VAL 126 143 143 VAL VAL N . n C 3 127 TYR 127 145 145 TYR TYR N . n C 3 128 GLN 128 146 146 GLN GLN N . n C 3 129 LYS 129 147 147 LYS LYS N . n C 3 130 ASN 130 148 148 ASN ASN N . n C 3 131 ASN 131 149 149 ASN ASN N . n C 3 132 LYS 132 150 150 LYS LYS N . n C 3 133 SER 133 151 151 SER SER N . n C 3 134 TRP 134 152 152 TRP TRP N . n C 3 135 MET 135 153 153 MET MET N . n C 3 136 GLU 136 154 154 GLU GLU N . n C 3 137 SER 137 155 155 SER SER N . n C 3 138 GLU 138 156 156 GLU GLU N . n C 3 139 PHE 139 157 157 PHE PHE N . n C 3 140 ARG 140 158 158 ARG ARG N . n C 3 141 VAL 141 159 159 VAL VAL N . n C 3 142 TYR 142 160 160 TYR TYR N . n C 3 143 SER 143 161 161 SER SER N . n C 3 144 SER 144 162 162 SER SER N . n C 3 145 ALA 145 163 163 ALA ALA N . n C 3 146 ASN 146 164 164 ASN ASN N . n C 3 147 ASN 147 165 165 ASN ASN N . n C 3 148 CYS 148 166 166 CYS CYS N . n C 3 149 THR 149 167 167 THR THR N . n C 3 150 PHE 150 168 168 PHE PHE N . n C 3 151 GLU 151 169 169 GLU GLU N . n C 3 152 TYR 152 170 170 TYR TYR N . n C 3 153 VAL 153 171 171 VAL VAL N . n C 3 154 SER 154 172 172 SER SER N . n C 3 155 GLN 155 173 173 GLN GLN N . n C 3 156 PRO 156 174 174 PRO PRO N . n C 3 157 PHE 157 175 175 PHE PHE N . n C 3 158 LEU 158 176 176 LEU LEU N . n C 3 159 MET 159 177 177 MET MET N . n C 3 160 ASP 160 178 178 ASP ASP N . n C 3 161 LEU 161 179 179 LEU LEU N . n C 3 162 GLU 162 180 180 GLU GLU N . n C 3 163 GLY 163 181 181 GLY GLY N . n C 3 164 LYS 164 182 182 LYS LYS N . n C 3 165 GLU 165 183 183 GLU GLU N . n C 3 166 GLY 166 184 184 GLY GLY N . n C 3 167 ASN 167 185 185 ASN ASN N . n C 3 168 PHE 168 186 186 PHE PHE N . n C 3 169 LYS 169 187 187 LYS LYS N . n C 3 170 ASN 170 188 188 ASN ASN N . n C 3 171 LEU 171 189 189 LEU LEU N . n C 3 172 ARG 172 190 190 ARG ARG N . n C 3 173 GLU 173 191 191 GLU GLU N . n C 3 174 PHE 174 192 192 PHE PHE N . n C 3 175 VAL 175 193 193 VAL VAL N . n C 3 176 PHE 176 194 194 PHE PHE N . n C 3 177 LYS 177 195 195 LYS LYS N . n C 3 178 ASN 178 196 196 ASN ASN N . n C 3 179 ILE 179 197 197 ILE ILE N . n C 3 180 ASP 180 198 198 ASP ASP N . n C 3 181 GLY 181 199 199 GLY GLY N . n C 3 182 TYR 182 200 200 TYR TYR N . n C 3 183 PHE 183 201 201 PHE PHE N . n C 3 184 LYS 184 202 202 LYS LYS N . n C 3 185 ILE 185 203 203 ILE ILE N . n C 3 186 TYR 186 204 204 TYR TYR N . n C 3 187 SER 187 205 205 SER SER N . n C 3 188 LYS 188 206 206 LYS LYS N . n C 3 189 HIS 189 207 207 HIS HIS N . n C 3 190 THR 190 208 208 THR THR N . n C 3 191 PRO 191 209 209 PRO PRO N . n C 3 192 ILE 192 210 210 ILE ILE N . n C 3 193 ASN 193 211 211 ASN ASN N . n C 3 194 LEU 194 212 212 LEU LEU N . n C 3 195 GLU 195 213 213 GLU GLU N . n C 3 196 ARG 196 214 214 ARG ARG N . n C 3 197 ASP 197 215 215 ASP ASP N . n C 3 198 LEU 198 216 216 LEU LEU N . n C 3 199 PRO 199 217 217 PRO PRO N . n C 3 200 GLN 200 218 218 GLN GLN N . n C 3 201 GLY 201 219 219 GLY GLY N . n C 3 202 PHE 202 220 220 PHE PHE N . n C 3 203 SER 203 221 221 SER SER N . n C 3 204 ALA 204 222 222 ALA ALA N . n C 3 205 LEU 205 223 223 LEU LEU N . n C 3 206 GLU 206 224 224 GLU GLU N . n C 3 207 PRO 207 225 225 PRO PRO N . n C 3 208 LEU 208 226 226 LEU LEU N . n C 3 209 VAL 209 227 227 VAL VAL N . n C 3 210 ASP 210 228 228 ASP ASP N . n C 3 211 LEU 211 229 229 LEU LEU N . n C 3 212 PRO 212 230 230 PRO PRO N . n C 3 213 ILE 213 231 231 ILE ILE N . n C 3 214 GLY 214 232 232 GLY GLY N . n C 3 215 ILE 215 233 233 ILE ILE N . n C 3 216 ASN 216 234 234 ASN ASN N . n C 3 217 ILE 217 235 235 ILE ILE N . n C 3 218 THR 218 236 236 THR THR N . n C 3 219 ARG 219 237 237 ARG ARG N . n C 3 220 PHE 220 238 238 PHE PHE N . n C 3 221 GLN 221 239 239 GLN GLN N . n C 3 222 THR 222 240 240 THR THR N . n C 3 223 LEU 223 241 241 LEU LEU N . n C 3 224 LEU 224 242 242 LEU LEU N . n C 3 225 ALA 225 243 243 ALA ALA N . n C 3 226 LEU 226 244 244 LEU LEU N . n C 3 227 HIS 227 245 245 HIS HIS N . n C 3 228 ARG 228 246 246 ARG ARG N . n C 3 229 SER 229 247 247 SER SER N . n C 3 230 TYR 230 248 ? ? ? N . n C 3 231 LEU 231 249 ? ? ? N . n C 3 232 THR 232 250 ? ? ? N . n C 3 233 PRO 233 251 ? ? ? N . n C 3 234 GLY 234 252 ? ? ? N . n C 3 235 ASP 235 253 ? ? ? N . n C 3 236 SER 236 254 ? ? ? N . n C 3 237 SER 237 255 ? ? ? N . n C 3 238 SER 238 256 ? ? ? N . n C 3 239 GLY 239 257 257 GLY GLY N . n C 3 240 TRP 240 258 258 TRP TRP N . n C 3 241 THR 241 259 259 THR THR N . n C 3 242 ALA 242 260 260 ALA ALA N . n C 3 243 GLY 243 261 261 GLY GLY N . n C 3 244 ALA 244 262 262 ALA ALA N . n C 3 245 ALA 245 263 263 ALA ALA N . n C 3 246 ALA 246 264 264 ALA ALA N . n C 3 247 TYR 247 265 265 TYR TYR N . n C 3 248 TYR 248 266 266 TYR TYR N . n C 3 249 VAL 249 267 267 VAL VAL N . n C 3 250 GLY 250 268 268 GLY GLY N . n C 3 251 TYR 251 269 269 TYR TYR N . n C 3 252 LEU 252 270 270 LEU LEU N . n C 3 253 GLN 253 271 271 GLN GLN N . n C 3 254 PRO 254 272 272 PRO PRO N . n C 3 255 ARG 255 273 273 ARG ARG N . n C 3 256 THR 256 274 274 THR THR N . n C 3 257 PHE 257 275 275 PHE PHE N . n C 3 258 LEU 258 276 276 LEU LEU N . n C 3 259 LEU 259 277 277 LEU LEU N . n C 3 260 LYS 260 278 278 LYS LYS N . n C 3 261 TYR 261 279 279 TYR TYR N . n C 3 262 ASN 262 280 280 ASN ASN N . n C 3 263 GLU 263 281 281 GLU GLU N . n C 3 264 ASN 264 282 282 ASN ASN N . n C 3 265 GLY 265 283 283 GLY GLY N . n C 3 266 THR 266 284 284 THR THR N . n C 3 267 ILE 267 285 285 ILE ILE N . n C 3 268 THR 268 286 286 THR THR N . n C 3 269 ASP 269 287 287 ASP ASP N . n C 3 270 ALA 270 288 288 ALA ALA N . n C 3 271 VAL 271 289 289 VAL VAL N . n C 3 272 ASP 272 290 290 ASP ASP N . n C 3 273 CYS 273 291 291 CYS CYS N . n C 3 274 ALA 274 292 292 ALA ALA N . n C 3 275 LEU 275 293 293 LEU LEU N . n C 3 276 ASP 276 294 294 ASP ASP N . n C 3 277 PRO 277 295 295 PRO PRO N . n C 3 278 LEU 278 296 296 LEU LEU N . n C 3 279 SER 279 297 297 SER SER N . n C 3 280 GLU 280 298 298 GLU GLU N . n C 3 281 THR 281 299 299 THR THR N . n C 3 282 LYS 282 300 300 LYS LYS N . n C 3 283 CYS 283 301 301 CYS CYS N . n C 3 284 THR 284 302 302 THR THR N . n C 3 285 LEU 285 303 303 LEU LEU N . n D 4 1 THR 1 323 323 THR THR R . n D 4 2 GLU 2 324 324 GLU GLU R . n D 4 3 SER 3 325 325 SER SER R . n D 4 4 ILE 4 326 326 ILE ILE R . n D 4 5 VAL 5 327 327 VAL VAL R . n D 4 6 ARG 6 328 328 ARG ARG R . n D 4 7 PHE 7 329 329 PHE PHE R . n D 4 8 PRO 8 330 330 PRO PRO R . n D 4 9 ASN 9 331 331 ASN ASN R . n D 4 10 ILE 10 332 332 ILE ILE R . n D 4 11 THR 11 333 333 THR THR R . n D 4 12 ASN 12 334 334 ASN ASN R . n D 4 13 LEU 13 335 335 LEU LEU R . n D 4 14 CYS 14 336 336 CYS CYS R . n D 4 15 PRO 15 337 337 PRO PRO R . n D 4 16 PHE 16 338 338 PHE PHE R . n D 4 17 HIS 17 339 339 HIS HIS R . n D 4 18 GLU 18 340 340 GLU GLU R . n D 4 19 VAL 19 341 341 VAL VAL R . n D 4 20 PHE 20 342 342 PHE PHE R . n D 4 21 ASN 21 343 343 ASN ASN R . n D 4 22 ALA 22 344 344 ALA ALA R . n D 4 23 THR 23 345 345 THR THR R . n D 4 24 THR 24 346 346 THR THR R . n D 4 25 PHE 25 347 347 PHE PHE R . n D 4 26 ALA 26 348 348 ALA ALA R . n D 4 27 SER 27 349 349 SER SER R . n D 4 28 VAL 28 350 350 VAL VAL R . n D 4 29 TYR 29 351 351 TYR TYR R . n D 4 30 ALA 30 352 352 ALA ALA R . n D 4 31 TRP 31 353 353 TRP TRP R . n D 4 32 ASN 32 354 354 ASN ASN R . n D 4 33 ARG 33 355 355 ARG ARG R . n D 4 34 LYS 34 356 356 LYS LYS R . n D 4 35 ARG 35 357 357 ARG ARG R . n D 4 36 ILE 36 358 358 ILE ILE R . n D 4 37 SER 37 359 359 SER SER R . n D 4 38 ASN 38 360 360 ASN ASN R . n D 4 39 CYS 39 361 361 CYS CYS R . n D 4 40 VAL 40 362 362 VAL VAL R . n D 4 41 ALA 41 363 363 ALA ALA R . n D 4 42 ASP 42 364 364 ASP ASP R . n D 4 43 TYR 43 365 365 TYR TYR R . n D 4 44 SER 44 366 366 SER SER R . n D 4 45 VAL 45 367 367 VAL VAL R . n D 4 46 ILE 46 368 368 ILE ILE R . n D 4 47 TYR 47 369 369 TYR TYR R . n D 4 48 ASN 48 370 370 ASN ASN R . n D 4 49 PHE 49 371 371 PHE PHE R . n D 4 50 ALA 50 372 372 ALA ALA R . n D 4 51 PRO 51 373 373 PRO PRO R . n D 4 52 PHE 52 374 374 PHE PHE R . n D 4 53 PHE 53 375 375 PHE PHE R . n D 4 54 ALA 54 376 376 ALA ALA R . n D 4 55 PHE 55 377 377 PHE PHE R . n D 4 56 LYS 56 378 378 LYS LYS R . n D 4 57 CYS 57 379 379 CYS CYS R . n D 4 58 TYR 58 380 380 TYR TYR R . n D 4 59 GLY 59 381 381 GLY GLY R . n D 4 60 VAL 60 382 382 VAL VAL R . n D 4 61 SER 61 383 383 SER SER R . n D 4 62 PRO 62 384 384 PRO PRO R . n D 4 63 THR 63 385 385 THR THR R . n D 4 64 LYS 64 386 386 LYS LYS R . n D 4 65 LEU 65 387 387 LEU LEU R . n D 4 66 ASN 66 388 388 ASN ASN R . n D 4 67 ASP 67 389 389 ASP ASP R . n D 4 68 LEU 68 390 390 LEU LEU R . n D 4 69 CYS 69 391 391 CYS CYS R . n D 4 70 PHE 70 392 392 PHE PHE R . n D 4 71 THR 71 393 393 THR THR R . n D 4 72 ASN 72 394 394 ASN ASN R . n D 4 73 VAL 73 395 395 VAL VAL R . n D 4 74 TYR 74 396 396 TYR TYR R . n D 4 75 ALA 75 397 397 ALA ALA R . n D 4 76 ASP 76 398 398 ASP ASP R . n D 4 77 SER 77 399 399 SER SER R . n D 4 78 PHE 78 400 400 PHE PHE R . n D 4 79 VAL 79 401 401 VAL VAL R . n D 4 80 ILE 80 402 402 ILE ILE R . n D 4 81 ARG 81 403 403 ARG ARG R . n D 4 82 GLY 82 404 404 GLY GLY R . n D 4 83 ASN 83 405 405 ASN ASN R . n D 4 84 GLU 84 406 406 GLU GLU R . n D 4 85 VAL 85 407 407 VAL VAL R . n D 4 86 SER 86 408 408 SER SER R . n D 4 87 GLN 87 409 409 GLN GLN R . n D 4 88 ILE 88 410 410 ILE ILE R . n D 4 89 ALA 89 411 411 ALA ALA R . n D 4 90 PRO 90 412 412 PRO PRO R . n D 4 91 GLY 91 413 413 GLY GLY R . n D 4 92 GLN 92 414 414 GLN GLN R . n D 4 93 THR 93 415 415 THR THR R . n D 4 94 GLY 94 416 416 GLY GLY R . n D 4 95 ASN 95 417 417 ASN ASN R . n D 4 96 ILE 96 418 418 ILE ILE R . n D 4 97 ALA 97 419 419 ALA ALA R . n D 4 98 ASP 98 420 420 ASP ASP R . n D 4 99 TYR 99 421 421 TYR TYR R . n D 4 100 ASN 100 422 422 ASN ASN R . n D 4 101 TYR 101 423 423 TYR TYR R . n D 4 102 LYS 102 424 424 LYS LYS R . n D 4 103 LEU 103 425 425 LEU LEU R . n D 4 104 PRO 104 426 426 PRO PRO R . n D 4 105 ASP 105 427 427 ASP ASP R . n D 4 106 ASP 106 428 428 ASP ASP R . n D 4 107 PHE 107 429 429 PHE PHE R . n D 4 108 THR 108 430 430 THR THR R . n D 4 109 GLY 109 431 431 GLY GLY R . n D 4 110 CYS 110 432 432 CYS CYS R . n D 4 111 VAL 111 433 433 VAL VAL R . n D 4 112 ILE 112 434 434 ILE ILE R . n D 4 113 ALA 113 435 435 ALA ALA R . n D 4 114 TRP 114 436 436 TRP TRP R . n D 4 115 ASN 115 437 437 ASN ASN R . n D 4 116 SER 116 438 438 SER SER R . n D 4 117 ASN 117 439 439 ASN ASN R . n D 4 118 LYS 118 440 440 LYS LYS R . n D 4 119 LEU 119 441 441 LEU LEU R . n D 4 120 ASP 120 442 442 ASP ASP R . n D 4 121 SER 121 443 443 SER SER R . n D 4 122 LYS 122 444 444 LYS LYS R . n D 4 123 PRO 123 445 445 PRO PRO R . n D 4 124 SER 124 446 446 SER SER R . n D 4 125 GLY 125 447 447 GLY GLY R . n D 4 126 ASN 126 448 448 ASN ASN R . n D 4 127 TYR 127 449 449 TYR TYR R . n D 4 128 ASN 128 450 450 ASN ASN R . n D 4 129 TYR 129 451 451 TYR TYR R . n D 4 130 LEU 130 452 452 LEU LEU R . n D 4 131 TYR 131 453 453 TYR TYR R . n D 4 132 ARG 132 454 454 ARG ARG R . n D 4 133 LEU 133 455 455 LEU LEU R . n D 4 134 PHE 134 456 456 PHE PHE R . n D 4 135 ARG 135 457 457 ARG ARG R . n D 4 136 LYS 136 458 458 LYS LYS R . n D 4 137 SER 137 459 459 SER SER R . n D 4 138 LYS 138 460 460 LYS LYS R . n D 4 139 LEU 139 461 461 LEU LEU R . n D 4 140 LYS 140 462 462 LYS LYS R . n D 4 141 PRO 141 463 463 PRO PRO R . n D 4 142 PHE 142 464 464 PHE PHE R . n D 4 143 GLU 143 465 465 GLU GLU R . n D 4 144 ARG 144 466 466 ARG ARG R . n D 4 145 ASP 145 467 467 ASP ASP R . n D 4 146 ILE 146 468 468 ILE ILE R . n D 4 147 SER 147 469 469 SER SER R . n D 4 148 THR 148 470 470 THR THR R . n D 4 149 GLU 149 471 471 GLU GLU R . n D 4 150 ILE 150 472 472 ILE ILE R . n D 4 151 TYR 151 473 473 TYR TYR R . n D 4 152 GLN 152 474 474 GLN GLN R . n D 4 153 ALA 153 475 475 ALA ALA R . n D 4 154 GLY 154 476 476 GLY GLY R . n D 4 155 ASN 155 477 477 ASN ASN R . n D 4 156 LYS 156 478 478 LYS LYS R . n D 4 157 PRO 157 479 479 PRO PRO R . n D 4 158 CYS 158 480 480 CYS CYS R . n D 4 159 ASN 159 481 481 ASN ASN R . n D 4 160 GLY 160 482 482 GLY GLY R . n D 4 161 VAL 161 483 483 VAL VAL R . n D 4 162 ALA 162 484 484 ALA ALA R . n D 4 163 GLY 163 485 485 GLY GLY R . n D 4 164 PRO 164 486 486 PRO PRO R . n D 4 165 ASN 165 487 487 ASN ASN R . n D 4 166 CYS 166 488 488 CYS CYS R . n D 4 167 TYR 167 489 489 TYR TYR R . n D 4 168 SER 168 490 490 SER SER R . n D 4 169 PRO 169 491 491 PRO PRO R . n D 4 170 LEU 170 492 492 LEU LEU R . n D 4 171 GLN 171 493 493 GLN GLN R . n D 4 172 SER 172 494 494 SER SER R . n D 4 173 TYR 173 495 495 TYR TYR R . n D 4 174 GLY 174 496 496 GLY GLY R . n D 4 175 PHE 175 497 497 PHE PHE R . n D 4 176 ARG 176 498 498 ARG ARG R . n D 4 177 PRO 177 499 499 PRO PRO R . n D 4 178 THR 178 500 500 THR THR R . n D 4 179 TYR 179 501 501 TYR TYR R . n D 4 180 GLY 180 502 502 GLY GLY R . n D 4 181 VAL 181 503 503 VAL VAL R . n D 4 182 GLY 182 504 504 GLY GLY R . n D 4 183 HIS 183 505 505 HIS HIS R . n D 4 184 GLN 184 506 506 GLN GLN R . n D 4 185 PRO 185 507 507 PRO PRO R . n D 4 186 TYR 186 508 508 TYR TYR R . n D 4 187 ARG 187 509 509 ARG ARG R . n D 4 188 VAL 188 510 510 VAL VAL R . n D 4 189 VAL 189 511 511 VAL VAL R . n D 4 190 VAL 190 512 512 VAL VAL R . n D 4 191 LEU 191 513 513 LEU LEU R . n D 4 192 SER 192 514 514 SER SER R . n D 4 193 PHE 193 515 515 PHE PHE R . n D 4 194 GLU 194 516 516 GLU GLU R . n D 4 195 LEU 195 517 517 LEU LEU R . n D 4 196 LEU 196 518 518 LEU LEU R . n D 4 197 HIS 197 519 519 HIS HIS R . n D 4 198 ALA 198 520 520 ALA ALA R . n D 4 199 PRO 199 521 521 PRO PRO R . n D 4 200 ALA 200 522 522 ALA ALA R . n D 4 201 THR 201 523 523 THR THR R . n D 4 202 VAL 202 524 524 VAL VAL R . n D 4 203 CYS 203 525 525 CYS CYS R . n D 4 204 GLY 204 526 526 GLY GLY R . n D 4 205 PRO 205 527 527 PRO PRO R . n D 4 206 LYS 206 528 528 LYS LYS R . n D 4 207 LYS 207 529 529 LYS LYS R . n D 4 208 SER 208 530 530 SER SER R . n D 4 209 THR 209 531 531 THR THR R . n D 4 210 ASN 210 532 532 ASN ASN R . n D 4 211 LEU 211 533 533 LEU LEU R . n D 4 212 VAL 212 534 534 VAL VAL R . n D 4 213 LYS 213 535 535 LYS LYS R . n D 4 214 ASN 214 536 536 ASN ASN R . n D 4 215 LYS 215 537 537 LYS LYS R . n D 4 216 CYS 216 538 538 CYS CYS R . n D 4 217 VAL 217 539 539 VAL VAL R . n D 4 218 ASN 218 540 540 ASN ASN R . n D 4 219 PHE 219 541 541 PHE PHE R . n D 4 220 ASN 220 542 542 ASN ASN R . n D 4 221 PHE 221 543 543 PHE PHE R . n D 4 222 ASN 222 544 544 ASN ASN R . n D 4 223 GLY 223 545 545 GLY GLY R . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG 1 401 307 NAG NAG N . F 5 NAG 1 402 306 NAG NAG N . G 5 NAG 1 403 304 NAG NAG N . H 5 NAG 1 404 308 NAG NAG N . I 5 NAG 1 405 309 NAG NAG N . J 5 NAG 1 406 305 NAG NAG N . K 5 NAG 1 601 546 NAG NAG R . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9XGO _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9XGO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9XGO _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9XGO _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.77 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 6009 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.676 ? 8165 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 5.998 ? 844 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.048 ? 906 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.006 ? 1042 ? f_plane_restr ? ? ? # _struct.entry_id 9XGO _struct.title 'Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9XGO _struct_keywords.text ;SARS-CoV-2; N-terminal domain; antibodies; N1/N2 loop; ACE2 competition, VIRAL PROTEIN/IMMUNE SYSTEM, VIRAL PROTEIN-IMMUNE SYSTEM complex ; _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9XGO 9XGO ? 1 ? 1 2 PDB 9XGO 9XGO ? 2 ? 1 3 UNP SPIKE_SARS2 P0DTC2 ? 3 ;CVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFAS TEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQP FLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDS SSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTL ; 15 4 UNP SPIKE_SARS2 P0DTC2 ? 4 ;TESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVI RGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNG VEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNG ; 323 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9XGO H 1 ? 121 ? 9XGO 1 ? 121 ? 1 121 2 2 9XGO L 1 ? 112 ? 9XGO 1 ? 112 ? 1 112 3 3 9XGO N 1 ? 285 ? P0DTC2 15 ? 303 ? 15 303 4 4 9XGO R 1 ? 223 ? P0DTC2 323 ? 545 ? 323 545 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 9XGO ILE N 5 ? UNP P0DTC2 THR 19 variant 19 1 3 9XGO ? N ? ? UNP P0DTC2 LEU 24 deletion ? 2 3 9XGO ? N ? ? UNP P0DTC2 PRO 25 deletion ? 3 3 9XGO ? N ? ? UNP P0DTC2 PRO 26 deletion ? 4 3 9XGO SER N 10 ? UNP P0DTC2 ALA 27 variant 27 5 3 9XGO ALA N 66 ? UNP P0DTC2 VAL 83 variant 83 6 3 9XGO ASP N 125 ? UNP P0DTC2 GLY 142 variant 142 7 3 9XGO ? N ? ? UNP P0DTC2 TYR 144 deletion ? 8 3 9XGO GLN N 128 ? UNP P0DTC2 HIS 146 variant 146 9 3 9XGO GLU N 165 ? UNP P0DTC2 GLN 183 variant 183 10 3 9XGO GLU N 195 ? UNP P0DTC2 VAL 213 variant 213 11 4 9XGO HIS R 17 ? UNP P0DTC2 GLY 339 variant 339 12 4 9XGO THR R 24 ? UNP P0DTC2 ARG 346 variant 346 13 4 9XGO ILE R 46 ? UNP P0DTC2 LEU 368 variant 368 14 4 9XGO PHE R 49 ? UNP P0DTC2 SER 371 variant 371 15 4 9XGO PRO R 51 ? UNP P0DTC2 SER 373 variant 373 16 4 9XGO PHE R 53 ? UNP P0DTC2 SER 375 variant 375 17 4 9XGO ALA R 54 ? UNP P0DTC2 THR 376 variant 376 18 4 9XGO ASN R 83 ? UNP P0DTC2 ASP 405 variant 405 19 4 9XGO SER R 86 ? UNP P0DTC2 ARG 408 variant 408 20 4 9XGO ASN R 95 ? UNP P0DTC2 LYS 417 variant 417 21 4 9XGO LYS R 118 ? UNP P0DTC2 ASN 440 variant 440 22 4 9XGO PRO R 123 ? UNP P0DTC2 VAL 445 variant 445 23 4 9XGO SER R 124 ? UNP P0DTC2 GLY 446 variant 446 24 4 9XGO LYS R 138 ? UNP P0DTC2 ASN 460 variant 460 25 4 9XGO ASN R 155 ? UNP P0DTC2 SER 477 variant 477 26 4 9XGO LYS R 156 ? UNP P0DTC2 THR 478 variant 478 27 4 9XGO ALA R 162 ? UNP P0DTC2 GLU 484 variant 484 28 4 9XGO PRO R 164 ? UNP P0DTC2 PHE 486 variant 486 29 4 9XGO SER R 168 ? UNP P0DTC2 PHE 490 variant 490 30 4 9XGO ARG R 176 ? UNP P0DTC2 GLN 498 variant 498 31 4 9XGO TYR R 179 ? UNP P0DTC2 ASN 501 variant 501 32 4 9XGO HIS R 183 ? UNP P0DTC2 TYR 505 variant 505 33 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR B 25 ? TYR B 32 ? THR L 25 TYR L 32 1 ? 8 HELX_P HELX_P2 AA2 GLN B 81 ? ALA B 86 ? GLN L 81 ALA L 86 5 ? 6 HELX_P HELX_P3 AA3 ASP C 276 ? THR C 284 ? ASP N 294 THR N 302 1 ? 9 HELX_P HELX_P4 AA4 SER D 27 ? TRP D 31 ? SER R 349 TRP R 353 5 ? 5 HELX_P HELX_P5 AA5 TYR D 43 ? ALA D 50 ? TYR R 365 ALA R 372 1 ? 8 HELX_P HELX_P6 AA6 SER D 61 ? ASN D 66 ? SER R 383 ASN R 388 1 ? 6 HELX_P HELX_P7 AA7 ARG D 81 ? ALA D 89 ? ARG R 403 ALA R 411 5 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 95 SG ? ? H CYS 21 H CYS 95 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 90 SG ? ? L CYS 22 L CYS 90 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? C CYS 1 SG ? ? ? 1_555 C CYS 119 SG ? ? N CYS 15 N CYS 136 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? C CYS 114 SG ? ? ? 1_555 C CYS 148 SG ? ? N CYS 131 N CYS 166 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? C CYS 273 SG ? ? ? 1_555 C CYS 283 SG ? ? N CYS 291 N CYS 301 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf6 disulf ? ? D CYS 14 SG ? ? ? 1_555 D CYS 39 SG ? ? R CYS 336 R CYS 361 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf7 disulf ? ? D CYS 57 SG ? ? ? 1_555 D CYS 110 SG ? ? R CYS 379 R CYS 432 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf8 disulf ? ? D CYS 69 SG ? ? ? 1_555 D CYS 203 SG ? ? R CYS 391 R CYS 525 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf9 disulf ? ? D CYS 158 SG ? ? ? 1_555 D CYS 166 SG ? ? R CYS 480 R CYS 488 1_555 ? ? ? ? ? ? ? 2.029 ? ? covale1 covale one ? C ASN 44 ND2 ? ? ? 1_555 G NAG . C1 ? ? N ASN 61 N NAG 403 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale2 covale one ? C ASN 57 ND2 ? ? ? 1_555 J NAG . C1 ? ? N ASN 74 N NAG 406 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale3 covale one ? C ASN 105 ND2 ? ? ? 1_555 F NAG . C1 ? ? N ASN 122 N NAG 402 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation covale4 covale one ? C ASN 147 ND2 ? ? ? 1_555 E NAG . C1 ? ? N ASN 165 N NAG 401 1_555 ? ? ? ? ? ? ? 1.433 ? N-Glycosylation covale5 covale one ? C ASN 216 ND2 ? ? ? 1_555 H NAG . C1 ? ? N ASN 234 N NAG 404 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale6 covale one ? C ASN 264 ND2 ? ? ? 1_555 I NAG . C1 ? ? N ASN 282 N NAG 405 1_555 ? ? ? ? ? ? ? 1.436 ? N-Glycosylation covale7 covale one ? D ASN 21 ND2 ? ? ? 1_555 K NAG . C1 ? ? R ASN 343 R NAG 601 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG E . ? ASN C 147 ? NAG N 401 ? 1_555 ASN N 165 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG F . ? ASN C 105 ? NAG N 402 ? 1_555 ASN N 122 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG G . ? ASN C 44 ? NAG N 403 ? 1_555 ASN N 61 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 NAG H . ? ASN C 216 ? NAG N 404 ? 1_555 ASN N 234 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 5 NAG I . ? ASN C 264 ? NAG N 405 ? 1_555 ASN N 282 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 6 NAG J . ? ASN C 57 ? NAG N 406 ? 1_555 ASN N 74 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 7 NAG K . ? ASN D 21 ? NAG R 601 ? 1_555 ASN R 343 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 8 CYS A 21 ? CYS A 95 ? CYS H 21 ? 1_555 CYS H 95 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS B 22 ? CYS B 90 ? CYS L 22 ? 1_555 CYS L 90 ? 1_555 SG SG . . . None 'Disulfide bridge' 10 CYS C 1 ? CYS C 119 ? CYS N 15 ? 1_555 CYS N 136 ? 1_555 SG SG . . . None 'Disulfide bridge' 11 CYS C 114 ? CYS C 148 ? CYS N 131 ? 1_555 CYS N 166 ? 1_555 SG SG . . . None 'Disulfide bridge' 12 CYS C 273 ? CYS C 283 ? CYS N 291 ? 1_555 CYS N 301 ? 1_555 SG SG . . . None 'Disulfide bridge' 13 CYS D 14 ? CYS D 39 ? CYS R 336 ? 1_555 CYS R 361 ? 1_555 SG SG . . . None 'Disulfide bridge' 14 CYS D 57 ? CYS D 110 ? CYS R 379 ? 1_555 CYS R 432 ? 1_555 SG SG . . . None 'Disulfide bridge' 15 CYS D 69 ? CYS D 203 ? CYS R 391 ? 1_555 CYS R 525 ? 1_555 SG SG . . . None 'Disulfide bridge' 16 CYS D 158 ? CYS D 166 ? CYS R 480 ? 1_555 CYS R 488 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 4 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 2 ? AA8 ? 2 ? AA9 ? 3 ? AB1 ? 2 ? AB2 ? 4 ? AB3 ? 3 ? AB4 ? 4 ? AB5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? parallel AB2 3 4 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB4 1 2 ? anti-parallel AB4 2 3 ? anti-parallel AB4 3 4 ? anti-parallel AB5 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 4 ? GLN A 5 ? VAL H 4 GLN H 5 AA1 2 LYS A 18 ? LYS A 22 ? LYS H 18 LYS H 22 AA1 3 THR A 77 ? GLU A 81 ? THR H 77 GLU H 81 AA1 4 THR A 70 ? ASP A 72 ? THR H 70 ASP H 72 AA2 1 GLU A 9 ? LYS A 11 ? GLU H 9 LYS H 11 AA2 2 THR A 115 ? VAL A 119 ? THR H 115 VAL H 119 AA2 3 VAL A 92 ? ASP A 98 ? VAL H 92 ASP H 98 AA2 4 HIS A 34 ? GLN A 38 ? HIS H 34 GLN H 38 AA2 5 LEU A 44 ? ILE A 49 ? LEU H 44 ILE H 49 AA3 1 GLU A 9 ? LYS A 11 ? GLU H 9 LYS H 11 AA3 2 THR A 115 ? VAL A 119 ? THR H 115 VAL H 119 AA3 3 VAL A 92 ? ASP A 98 ? VAL H 92 ASP H 98 AA3 4 PHE A 108 ? ASP A 109 ? PHE H 108 ASP H 109 AA4 1 SER B 11 ? GLY B 12 ? SER L 11 GLY L 12 AA4 2 THR B 108 ? VAL B 109 ? THR L 108 VAL L 109 AA5 1 GLN B 39 ? GLN B 40 ? GLN L 39 GLN L 40 AA5 2 ASP B 87 ? TYR B 88 ? ASP L 87 TYR L 88 AA6 1 SER B 91 ? TYR B 93 ? SER L 91 TYR L 93 AA6 2 LEU B 99 ? PHE B 101 ? LEU L 99 PHE L 101 AA7 1 THR C 6 ? THR C 8 ? THR N 20 THR N 22 AA7 2 HIS C 49 ? ILE C 51 ? HIS N 66 ILE N 68 AA8 1 TYR C 11 ? SER C 14 ? TYR N 28 SER N 31 AA8 2 SER C 43 ? THR C 46 ? SER N 60 THR N 63 AA9 1 LEU C 31 ? HIS C 32 ? LEU N 48 HIS N 49 AA9 2 LEU C 258 ? TYR C 261 ? LEU N 276 TYR N 279 AA9 3 ILE C 267 ? VAL C 271 ? ILE N 285 VAL N 289 AB1 1 GLN C 35 ? PHE C 38 ? GLN N 52 PHE N 55 AB1 2 GLN C 253 ? THR C 256 ? GLN N 271 THR N 274 AB2 1 GLY C 86 ? TRP C 87 ? GLY N 103 TRP N 104 AB2 2 THR C 222 ? HIS C 227 ? THR N 240 HIS N 245 AB2 3 PHE C 123 ? TYR C 127 ? PHE N 140 TYR N 145 AB2 4 GLU C 136 ? SER C 137 ? GLU N 154 SER N 155 AB3 1 LEU C 171 ? ILE C 179 ? LEU N 189 ILE N 197 AB3 2 TYR C 182 ? THR C 190 ? TYR N 200 THR N 208 AB3 3 GLU C 206 ? LEU C 211 ? GLU N 224 LEU N 229 AB4 1 ARG D 33 ? ILE D 36 ? ARG R 355 ILE R 358 AB4 2 VAL D 73 ? ILE D 80 ? VAL R 395 ILE R 402 AB4 3 TYR D 186 ? SER D 192 ? TYR R 508 SER R 514 AB4 4 CYS D 110 ? ASN D 115 ? CYS R 432 ASN R 437 AB5 1 LEU D 130 ? ARG D 132 ? LEU R 452 ARG R 454 AB5 2 LEU D 170 ? SER D 172 ? LEU R 492 SER R 494 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 4 ? N VAL H 4 O LYS A 22 ? O LYS H 22 AA1 2 3 N CYS A 21 ? N CYS H 21 O VAL A 78 ? O VAL H 78 AA1 3 4 O TYR A 79 ? O TYR H 79 N THR A 70 ? N THR H 70 AA2 1 2 N LYS A 11 ? N LYS H 11 O THR A 118 ? O THR H 118 AA2 2 3 O THR A 115 ? O THR H 115 N TYR A 93 ? N TYR H 93 AA2 3 4 O ALA A 96 ? O ALA H 96 N HIS A 34 ? N HIS H 34 AA2 4 5 N TRP A 35 ? N TRP H 35 O MET A 47 ? O MET H 47 AA3 1 2 N LYS A 11 ? N LYS H 11 O THR A 118 ? O THR H 118 AA3 2 3 O THR A 115 ? O THR H 115 N TYR A 93 ? N TYR H 93 AA3 3 4 N ARG A 97 ? N ARG H 97 O ASP A 109 ? O ASP H 109 AA4 1 2 N GLY B 12 ? N GLY L 12 O THR B 108 ? O THR L 108 AA5 1 2 N GLN B 40 ? N GLN L 40 O ASP B 87 ? O ASP L 87 AA6 1 2 N SER B 92 ? N SER L 92 O LEU B 100 ? O LEU L 100 AA7 1 2 N THR C 6 ? N THR N 20 O ILE C 51 ? O ILE N 68 AA8 1 2 N THR C 12 ? N THR N 29 O VAL C 45 ? O VAL N 62 AA9 1 2 N HIS C 32 ? N HIS N 49 O LEU C 259 ? O LEU N 277 AA9 2 3 N LYS C 260 ? N LYS N 278 O ASP C 269 ? O ASP N 287 AB1 1 2 N PHE C 38 ? N PHE N 55 O GLN C 253 ? O GLN N 271 AB2 1 2 N GLY C 86 ? N GLY N 103 O LEU C 223 ? O LEU N 241 AB2 2 3 O LEU C 224 ? O LEU N 242 N LEU C 124 ? N LEU N 141 AB2 3 4 N TYR C 127 ? N TYR N 145 O GLU C 136 ? O GLU N 154 AB3 1 2 N ILE C 179 ? N ILE N 197 O TYR C 182 ? O TYR N 200 AB3 2 3 N ILE C 185 ? N ILE N 203 O LEU C 208 ? O LEU N 226 AB4 1 2 N LYS D 34 ? N LYS R 356 O ALA D 75 ? O ALA R 397 AB4 2 3 N ILE D 80 ? N ILE R 402 O TYR D 186 ? O TYR R 508 AB4 3 4 O VAL D 189 ? O VAL R 511 N ILE D 112 ? N ILE R 434 AB5 1 2 N TYR D 131 ? N TYR R 453 O GLN D 171 ? O GLN R 493 # _pdbx_entry_details.entry_id 9XGO _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O L THR 5 ? ? OG1 L THR 23 ? ? 2.12 2 1 O R THR 393 ? ? OG1 R THR 523 ? ? 2.14 3 1 OG L SER 65 ? ? OG1 L THR 76 ? ? 2.17 4 1 OG1 L THR 94 ? ? O L SER 96 ? ? 2.18 5 1 OG L SER 17 ? ? O R ASN 481 ? ? 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 R _pdbx_validate_rmsd_angle.auth_comp_id_1 CYS _pdbx_validate_rmsd_angle.auth_seq_id_1 391 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 R _pdbx_validate_rmsd_angle.auth_comp_id_2 CYS _pdbx_validate_rmsd_angle.auth_seq_id_2 391 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 SG _pdbx_validate_rmsd_angle.auth_asym_id_3 R _pdbx_validate_rmsd_angle.auth_comp_id_3 CYS _pdbx_validate_rmsd_angle.auth_seq_id_3 391 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 121.27 _pdbx_validate_rmsd_angle.angle_target_value 114.20 _pdbx_validate_rmsd_angle.angle_deviation 7.07 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET H 33 ? ? -160.41 119.03 2 1 ASN H 51 ? ? -39.20 113.98 3 1 SER H 87 ? ? 56.85 8.68 4 1 ASP L 52 ? ? -116.25 -169.52 5 1 ASP N 53 ? ? -162.72 -168.33 6 1 THR N 73 ? ? -175.47 147.87 7 1 THR N 76 ? ? 38.83 41.49 8 1 ALA N 83 ? ? -171.90 135.87 9 1 ASP N 88 ? ? 56.49 -117.39 10 1 PHE N 106 ? ? -35.72 129.93 11 1 GLN N 134 ? ? -99.89 38.84 12 1 LYS N 147 ? ? -90.83 -63.30 13 1 TRP N 152 ? ? 51.92 -137.53 14 1 CYS N 166 ? ? -172.03 -174.99 15 1 THR N 167 ? ? -100.69 -169.33 16 1 VAL N 171 ? ? 33.13 61.02 17 1 SER N 172 ? ? -101.74 -169.32 18 1 ASP N 178 ? ? -92.37 52.16 19 1 ASP N 198 ? ? 34.45 47.12 20 1 LYS N 206 ? ? -170.16 142.91 21 1 LEU N 216 ? ? 61.94 73.58 22 1 PRO N 217 ? ? -67.07 -174.37 23 1 PHE N 220 ? ? -96.50 32.82 24 1 ASN N 234 ? ? -97.76 38.20 25 1 ASN N 282 ? ? -90.98 48.98 26 1 CYS N 291 ? ? 66.05 -1.65 27 1 PHE R 342 ? ? -94.79 -60.28 28 1 CYS R 361 ? ? -160.23 -168.99 29 1 TYR R 365 ? ? -53.92 -8.13 30 1 PHE R 377 ? ? -140.79 21.96 31 1 ASN R 487 ? ? 56.53 17.11 32 1 ASN R 536 ? ? 73.51 -5.52 33 1 CYS R 538 ? ? -178.32 149.61 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASN _pdbx_validate_peptide_omega.auth_asym_id_1 N _pdbx_validate_peptide_omega.auth_seq_id_1 81 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 N _pdbx_validate_peptide_omega.auth_seq_id_2 82 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 144.26 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9XGO _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9XGO _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.77 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 111000 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'BD58-0730-S 6P trimer complex' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3, 4' # _em_imaging.entry_id 9XGO _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9XGO _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9XGO _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 N TYR 248 ? C TYR 230 2 1 Y 1 N LEU 249 ? C LEU 231 3 1 Y 1 N THR 250 ? C THR 232 4 1 Y 1 N PRO 251 ? C PRO 233 5 1 Y 1 N GLY 252 ? C GLY 234 6 1 Y 1 N ASP 253 ? C ASP 235 7 1 Y 1 N SER 254 ? C SER 236 8 1 Y 1 N SER 255 ? C SER 237 9 1 Y 1 N SER 256 ? C SER 238 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2025-10-30 _em_admin.deposition_site PDBJ _em_admin.entry_id 9XGO _em_admin.last_update 2025-12-03 _em_admin.map_release_date 2025-12-03 _em_admin.title 'Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING ONLY' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX 1.19.2_4158 ? 'IMAGE ACQUISITION' ? 3 ? ? 1 ? ? ? MASKING ? 4 ? ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? ? 'MODEL FITTING' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? # _em_specimen.concentration 1.0 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other government' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9XGO _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #