HEADER DNA BINDING PROTEIN/DNA 20-NOV-25 9XS1 TITLE CRYSTAL STRUCTURE OF FOXM1 DNA BINDING DOMAIN TO SPECIFIC DSDNA TITLE 2 SUBSTRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORKHEAD BOX PROTEIN M1; COMPND 3 CHAIN: A, D, G; COMPND 4 FRAGMENT: DNA BINDING DOMAIN; COMPND 5 SYNONYM: FORKHEAD-RELATED PROTEIN FKHL16,HEPATOCYTE NUCLEAR FACTOR 3 COMPND 6 FORKHEAD HOMOLOG 11,HFH-11,HNF-3/FORK-HEAD HOMOLOG 11,M-PHASE COMPND 7 PHOSPHOPROTEIN 2,MPM-2 REACTIVE PHOSPHOPROTEIN 2,TRANSCRIPTION FACTOR COMPND 8 TRIDENT,WINGED-HELIX FACTOR FROM INS-1 CELLS; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA (5'- COMPND 12 D(*TP*TP*TP*GP*TP*TP*TP*AP*TP*TP*TP*GP*TP*TP*TP*GP*TP*TP*TP*AP*TP*TP* COMPND 13 TP*G)-3'); COMPND 14 CHAIN: E, B; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: DNA (5'- COMPND 18 D(*CP*AP*AP*AP*TP*AP*AP*AP*CP*AP*AP*AP*CP*AP*AP*AP*TP*AP*AP*AP*CP*AP* COMPND 19 AP*A)-3'); COMPND 20 CHAIN: F, C; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FOXM1, FKHL16, HFH11, MPP2, WIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS TRANSCRIPTION FACTOR, DNA-BINDING DOMAIN, DNA BINDING PROTEIN/DNA, KEYWDS 2 DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.Q.LV,M.X.SUN,W.W.ZHOU REVDAT 1 15-APR-26 9XS1 0 JRNL AUTH M.SUN,L.WANG,J.CUI,L.ZHANG,Y.SHI,C.XU,W.ZHOU,M.LV JRNL TITL STRUCTURAL BASIS FOR THE FOXM1 DNA BINDING DOMAIN TO JRNL TITL 2 SPECIFIC DSDNA SUBSTRATE. JRNL REF ACTA BIOCHIM.BIOPHYS.SIN. 2026 JRNL REFN ESSN 1745-7270 JRNL PMID 41889283 JRNL DOI 10.3724/ABBS.2026036 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19_4092: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 24016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.780 REMARK 3 FREE R VALUE TEST SET COUNT : 1148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.4000 - 4.9900 0.99 2986 148 0.1674 0.1872 REMARK 3 2 4.9900 - 3.9700 0.99 2905 143 0.1857 0.2457 REMARK 3 3 3.9700 - 3.4700 1.00 2869 145 0.2098 0.2251 REMARK 3 4 3.4700 - 3.1500 0.96 2799 128 0.2287 0.3079 REMARK 3 5 3.1500 - 2.9200 0.97 2814 122 0.3003 0.3736 REMARK 3 6 2.9200 - 2.7500 1.00 2843 159 0.3116 0.3132 REMARK 3 7 2.7500 - 2.6100 0.98 2823 169 0.3223 0.3399 REMARK 3 8 2.6100 - 2.5000 0.99 2829 134 0.3424 0.3896 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4013 REMARK 3 ANGLE : 1.160 5845 REMARK 3 CHIRALITY : 0.059 633 REMARK 3 PLANARITY : 0.010 399 REMARK 3 DIHEDRAL : 32.310 1176 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 236 THROUGH 312) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3088 3.7545 45.0897 REMARK 3 T TENSOR REMARK 3 T11: 0.3799 T22: 0.2678 REMARK 3 T33: 0.4242 T12: -0.0323 REMARK 3 T13: 0.0120 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 3.3484 L22: 9.4224 REMARK 3 L33: 8.2399 L12: 1.0347 REMARK 3 L13: 1.0556 L23: 0.2985 REMARK 3 S TENSOR REMARK 3 S11: -0.0072 S12: 0.0191 S13: 0.0289 REMARK 3 S21: -0.0892 S22: 0.0863 S23: 0.4611 REMARK 3 S31: 0.1035 S32: -0.5174 S33: -0.0685 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 236 THROUGH 312) REMARK 3 ORIGIN FOR THE GROUP (A): -26.2257 1.9016 44.5249 REMARK 3 T TENSOR REMARK 3 T11: 0.4443 T22: 0.2817 REMARK 3 T33: 0.5165 T12: -0.0180 REMARK 3 T13: -0.0429 T23: 0.0447 REMARK 3 L TENSOR REMARK 3 L11: 4.1445 L22: 8.7401 REMARK 3 L33: 6.0091 L12: 0.1102 REMARK 3 L13: 0.8710 L23: 3.2325 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: -0.0905 S13: 0.0385 REMARK 3 S21: -0.4763 S22: -0.0759 S23: 0.3158 REMARK 3 S31: -0.0866 S32: -0.0040 S33: 0.0744 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'E' AND RESID 1 THROUGH 24) REMARK 3 ORIGIN FOR THE GROUP (A): -39.3206 2.6287 25.5915 REMARK 3 T TENSOR REMARK 3 T11: 1.2497 T22: 1.0055 REMARK 3 T33: 0.9058 T12: 0.1092 REMARK 3 T13: -0.4241 T23: 0.2500 REMARK 3 L TENSOR REMARK 3 L11: 3.0708 L22: 1.0036 REMARK 3 L33: 2.9590 L12: -0.8897 REMARK 3 L13: -2.0358 L23: 1.8101 REMARK 3 S TENSOR REMARK 3 S11: 0.8355 S12: 1.4437 S13: -0.1796 REMARK 3 S21: -1.0360 S22: -0.0939 S23: 0.7729 REMARK 3 S31: -0.6066 S32: -0.8407 S33: -0.7161 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'F' AND RESID 1 THROUGH 24) REMARK 3 ORIGIN FOR THE GROUP (A): -39.8623 3.0787 26.2704 REMARK 3 T TENSOR REMARK 3 T11: 1.5995 T22: 0.9900 REMARK 3 T33: 1.1638 T12: 0.1123 REMARK 3 T13: -0.4437 T23: 0.2741 REMARK 3 L TENSOR REMARK 3 L11: 5.3640 L22: 4.8495 REMARK 3 L33: 4.8419 L12: -4.9848 REMARK 3 L13: 1.5261 L23: -3.8375 REMARK 3 S TENSOR REMARK 3 S11: 0.8947 S12: 1.7772 S13: 0.2427 REMARK 3 S21: -0.8688 S22: -0.5656 S23: 0.5971 REMARK 3 S31: -0.4633 S32: -0.2189 S33: -0.1750 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN 'G' AND RESID 237 THROUGH 311) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7584 -13.1626 22.0563 REMARK 3 T TENSOR REMARK 3 T11: 1.0089 T22: 0.9530 REMARK 3 T33: 0.7458 T12: -0.2860 REMARK 3 T13: 0.1143 T23: -0.3524 REMARK 3 L TENSOR REMARK 3 L11: 5.9328 L22: 1.7833 REMARK 3 L33: 9.2435 L12: 1.1456 REMARK 3 L13: -3.8125 L23: -1.3759 REMARK 3 S TENSOR REMARK 3 S11: -0.8575 S12: 1.6261 S13: -1.1658 REMARK 3 S21: -0.5003 S22: 0.7826 S23: 0.0757 REMARK 3 S31: 0.6823 S32: -0.4469 S33: -0.0209 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 1 THROUGH 24) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4480 3.3304 23.6547 REMARK 3 T TENSOR REMARK 3 T11: 1.1364 T22: 0.8239 REMARK 3 T33: 0.5493 T12: -0.1618 REMARK 3 T13: -0.0803 T23: -0.1901 REMARK 3 L TENSOR REMARK 3 L11: 3.5997 L22: 3.4026 REMARK 3 L33: 3.1964 L12: 1.9580 REMARK 3 L13: -1.1601 L23: 1.6620 REMARK 3 S TENSOR REMARK 3 S11: -0.7436 S12: 1.1969 S13: -0.4212 REMARK 3 S21: -1.6096 S22: 0.2541 S23: -0.2876 REMARK 3 S31: -0.7009 S32: -0.7257 S33: 0.1573 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 1 THROUGH 24) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9665 2.9938 23.2444 REMARK 3 T TENSOR REMARK 3 T11: 1.1162 T22: 0.7673 REMARK 3 T33: 0.6448 T12: -0.1474 REMARK 3 T13: -0.0614 T23: -0.1615 REMARK 3 L TENSOR REMARK 3 L11: 2.6968 L22: 3.1513 REMARK 3 L33: 4.5512 L12: 1.4595 REMARK 3 L13: -0.1168 L23: 2.3794 REMARK 3 S TENSOR REMARK 3 S11: -0.3754 S12: 0.8390 S13: -0.5852 REMARK 3 S21: -1.0812 S22: 0.1443 S23: -0.1655 REMARK 3 S31: -0.2042 S32: -0.9943 S33: 0.1133 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9XS1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 25-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1300066114. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24027 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 38.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.89100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 20000, 0.1 M SODIUM CITRATE REMARK 280 TRIBASIC DIHYDRATE (PH 5.0) AND 0.2 M MAGNESIUM CHLORIDE REMARK 280 HEXAHYDRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 25.28047 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.80500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 106.19676 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 25.28047 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.80500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 106.19676 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 223 REMARK 465 ARG A 224 REMARK 465 PRO A 225 REMARK 465 SER A 226 REMARK 465 ALA A 227 REMARK 465 SER A 228 REMARK 465 TRP A 229 REMARK 465 GLN A 230 REMARK 465 ASN A 231 REMARK 465 SER A 232 REMARK 465 VAL A 233 REMARK 465 SER A 234 REMARK 465 GLU A 235 REMARK 465 SER A 313 REMARK 465 ALA A 314 REMARK 465 ASN A 315 REMARK 465 ARG A 316 REMARK 465 TYR A 317 REMARK 465 LEU A 318 REMARK 465 THR A 319 REMARK 465 LEU A 320 REMARK 465 ASP A 321 REMARK 465 GLN A 322 REMARK 465 VAL A 323 REMARK 465 PHE A 324 REMARK 465 LYS A 325 REMARK 465 PRO A 326 REMARK 465 LEU A 327 REMARK 465 ASP A 328 REMARK 465 PRO A 329 REMARK 465 GLY A 330 REMARK 465 SER A 331 REMARK 465 PRO A 332 REMARK 465 GLN A 333 REMARK 465 LEU A 334 REMARK 465 PRO A 335 REMARK 465 GLU A 336 REMARK 465 HIS A 337 REMARK 465 LEU A 338 REMARK 465 GLU A 339 REMARK 465 SER A 340 REMARK 465 GLN A 341 REMARK 465 GLN A 342 REMARK 465 LYS A 343 REMARK 465 ARG A 344 REMARK 465 PRO A 345 REMARK 465 ASN A 346 REMARK 465 PRO A 347 REMARK 465 GLU A 348 REMARK 465 LEU A 349 REMARK 465 ARG A 350 REMARK 465 ARG A 351 REMARK 465 ASN A 352 REMARK 465 MET A 353 REMARK 465 THR A 354 REMARK 465 ILE A 355 REMARK 465 LYS A 356 REMARK 465 THR A 357 REMARK 465 GLU A 358 REMARK 465 LEU A 359 REMARK 465 PRO A 360 REMARK 465 SER D 223 REMARK 465 ARG D 224 REMARK 465 PRO D 225 REMARK 465 SER D 226 REMARK 465 ALA D 227 REMARK 465 SER D 228 REMARK 465 TRP D 229 REMARK 465 GLN D 230 REMARK 465 ASN D 231 REMARK 465 SER D 232 REMARK 465 VAL D 233 REMARK 465 SER D 234 REMARK 465 GLU D 235 REMARK 465 SER D 313 REMARK 465 ALA D 314 REMARK 465 ASN D 315 REMARK 465 ARG D 316 REMARK 465 TYR D 317 REMARK 465 LEU D 318 REMARK 465 THR D 319 REMARK 465 LEU D 320 REMARK 465 ASP D 321 REMARK 465 GLN D 322 REMARK 465 VAL D 323 REMARK 465 PHE D 324 REMARK 465 LYS D 325 REMARK 465 PRO D 326 REMARK 465 LEU D 327 REMARK 465 ASP D 328 REMARK 465 PRO D 329 REMARK 465 GLY D 330 REMARK 465 SER D 331 REMARK 465 PRO D 332 REMARK 465 GLN D 333 REMARK 465 LEU D 334 REMARK 465 PRO D 335 REMARK 465 GLU D 336 REMARK 465 HIS D 337 REMARK 465 LEU D 338 REMARK 465 GLU D 339 REMARK 465 SER D 340 REMARK 465 GLN D 341 REMARK 465 GLN D 342 REMARK 465 LYS D 343 REMARK 465 ARG D 344 REMARK 465 PRO D 345 REMARK 465 ASN D 346 REMARK 465 PRO D 347 REMARK 465 GLU D 348 REMARK 465 LEU D 349 REMARK 465 ARG D 350 REMARK 465 ARG D 351 REMARK 465 ASN D 352 REMARK 465 MET D 353 REMARK 465 THR D 354 REMARK 465 ILE D 355 REMARK 465 LYS D 356 REMARK 465 THR D 357 REMARK 465 GLU D 358 REMARK 465 LEU D 359 REMARK 465 PRO D 360 REMARK 465 SER G 223 REMARK 465 ARG G 224 REMARK 465 PRO G 225 REMARK 465 SER G 226 REMARK 465 ALA G 227 REMARK 465 SER G 228 REMARK 465 TRP G 229 REMARK 465 GLN G 230 REMARK 465 ASN G 231 REMARK 465 SER G 232 REMARK 465 VAL G 233 REMARK 465 SER G 234 REMARK 465 GLU G 235 REMARK 465 ARG G 236 REMARK 465 LYS G 274 REMARK 465 HIS G 275 REMARK 465 ILE G 276 REMARK 465 ALA G 277 REMARK 465 LYS G 278 REMARK 465 GLU G 298 REMARK 465 THR G 299 REMARK 465 SER G 300 REMARK 465 ALA G 301 REMARK 465 ASN G 302 REMARK 465 GLY G 303 REMARK 465 LYS G 304 REMARK 465 VAL G 305 REMARK 465 SER G 306 REMARK 465 PHE G 307 REMARK 465 PRO G 312 REMARK 465 SER G 313 REMARK 465 ALA G 314 REMARK 465 ASN G 315 REMARK 465 ARG G 316 REMARK 465 TYR G 317 REMARK 465 LEU G 318 REMARK 465 THR G 319 REMARK 465 LEU G 320 REMARK 465 ASP G 321 REMARK 465 GLN G 322 REMARK 465 VAL G 323 REMARK 465 PHE G 324 REMARK 465 LYS G 325 REMARK 465 PRO G 326 REMARK 465 LEU G 327 REMARK 465 ASP G 328 REMARK 465 PRO G 329 REMARK 465 GLY G 330 REMARK 465 SER G 331 REMARK 465 PRO G 332 REMARK 465 GLN G 333 REMARK 465 LEU G 334 REMARK 465 PRO G 335 REMARK 465 GLU G 336 REMARK 465 HIS G 337 REMARK 465 LEU G 338 REMARK 465 GLU G 339 REMARK 465 SER G 340 REMARK 465 GLN G 341 REMARK 465 GLN G 342 REMARK 465 LYS G 343 REMARK 465 ARG G 344 REMARK 465 PRO G 345 REMARK 465 ASN G 346 REMARK 465 PRO G 347 REMARK 465 GLU G 348 REMARK 465 LEU G 349 REMARK 465 ARG G 350 REMARK 465 ARG G 351 REMARK 465 ASN G 352 REMARK 465 MET G 353 REMARK 465 THR G 354 REMARK 465 ILE G 355 REMARK 465 LYS G 356 REMARK 465 THR G 357 REMARK 465 GLU G 358 REMARK 465 LEU G 359 REMARK 465 PRO G 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 276 CG1 CG2 CD1 REMARK 470 LYS A 278 CG CD CE NZ REMARK 470 HIS A 311 CG ND1 CD2 CE1 NE2 REMARK 470 ASP D 293 CG OD1 OD2 REMARK 470 LYS D 304 CG CD CE NZ REMARK 470 HIS D 311 CG ND1 CD2 CE1 NE2 REMARK 470 GLU G 253 CG CD OE1 OE2 REMARK 470 ARG G 254 CG CD NE CZ NH1 NH2 REMARK 470 ARG G 256 CG CD NE CZ NH1 NH2 REMARK 470 LEU G 259 CG CD1 CD2 REMARK 470 LYS G 260 CG CD CE NZ REMARK 470 TYR G 263 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU G 267 CG CD OE1 OE2 REMARK 470 TYR G 272 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP G 293 CG OD1 OD2 REMARK 470 MET G 294 CG SD CE REMARK 470 VAL G 296 CG1 CG2 REMARK 470 ARG G 297 CG CD NE CZ NH1 NH2 REMARK 470 ILE G 310 CG1 CG2 CD1 REMARK 470 HIS G 311 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT B 15 O3' DT B 15 C3' -0.041 REMARK 500 DA C 3 O3' DA C 3 C3' -0.046 REMARK 500 DA C 7 O3' DA C 7 C3' -0.040 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG B 4 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 271 0.18 -61.11 REMARK 500 HIS A 275 -69.68 -131.60 REMARK 500 PRO D 238 46.45 -82.79 REMARK 500 LEU G 291 -60.71 -93.71 REMARK 500 MET G 294 -7.83 -59.34 REMARK 500 REMARK 500 REMARK: NULL DBREF 9XS1 A 223 360 UNP Q08050 FOXM1_HUMAN 223 360 DBREF 9XS1 D 223 360 UNP Q08050 FOXM1_HUMAN 223 360 DBREF 9XS1 E 1 24 PDB 9XS1 9XS1 1 24 DBREF 9XS1 F 1 24 PDB 9XS1 9XS1 1 24 DBREF 9XS1 G 223 360 UNP Q08050 FOXM1_HUMAN 223 360 DBREF 9XS1 B 1 24 PDB 9XS1 9XS1 1 24 DBREF 9XS1 C 1 24 PDB 9XS1 9XS1 1 24 SEQRES 1 A 138 SER ARG PRO SER ALA SER TRP GLN ASN SER VAL SER GLU SEQRES 2 A 138 ARG PRO PRO TYR SER TYR MET ALA MET ILE GLN PHE ALA SEQRES 3 A 138 ILE ASN SER THR GLU ARG LYS ARG MET THR LEU LYS ASP SEQRES 4 A 138 ILE TYR THR TRP ILE GLU ASP HIS PHE PRO TYR PHE LYS SEQRES 5 A 138 HIS ILE ALA LYS PRO GLY TRP LYS ASN SER ILE ARG HIS SEQRES 6 A 138 ASN LEU SER LEU HIS ASP MET PHE VAL ARG GLU THR SER SEQRES 7 A 138 ALA ASN GLY LYS VAL SER PHE TRP THR ILE HIS PRO SER SEQRES 8 A 138 ALA ASN ARG TYR LEU THR LEU ASP GLN VAL PHE LYS PRO SEQRES 9 A 138 LEU ASP PRO GLY SER PRO GLN LEU PRO GLU HIS LEU GLU SEQRES 10 A 138 SER GLN GLN LYS ARG PRO ASN PRO GLU LEU ARG ARG ASN SEQRES 11 A 138 MET THR ILE LYS THR GLU LEU PRO SEQRES 1 D 138 SER ARG PRO SER ALA SER TRP GLN ASN SER VAL SER GLU SEQRES 2 D 138 ARG PRO PRO TYR SER TYR MET ALA MET ILE GLN PHE ALA SEQRES 3 D 138 ILE ASN SER THR GLU ARG LYS ARG MET THR LEU LYS ASP SEQRES 4 D 138 ILE TYR THR TRP ILE GLU ASP HIS PHE PRO TYR PHE LYS SEQRES 5 D 138 HIS ILE ALA LYS PRO GLY TRP LYS ASN SER ILE ARG HIS SEQRES 6 D 138 ASN LEU SER LEU HIS ASP MET PHE VAL ARG GLU THR SER SEQRES 7 D 138 ALA ASN GLY LYS VAL SER PHE TRP THR ILE HIS PRO SER SEQRES 8 D 138 ALA ASN ARG TYR LEU THR LEU ASP GLN VAL PHE LYS PRO SEQRES 9 D 138 LEU ASP PRO GLY SER PRO GLN LEU PRO GLU HIS LEU GLU SEQRES 10 D 138 SER GLN GLN LYS ARG PRO ASN PRO GLU LEU ARG ARG ASN SEQRES 11 D 138 MET THR ILE LYS THR GLU LEU PRO SEQRES 1 E 24 DT DT DT DG DT DT DT DA DT DT DT DG DT SEQRES 2 E 24 DT DT DG DT DT DT DA DT DT DT DG SEQRES 1 F 24 DC DA DA DA DT DA DA DA DC DA DA DA DC SEQRES 2 F 24 DA DA DA DT DA DA DA DC DA DA DA SEQRES 1 G 138 SER ARG PRO SER ALA SER TRP GLN ASN SER VAL SER GLU SEQRES 2 G 138 ARG PRO PRO TYR SER TYR MET ALA MET ILE GLN PHE ALA SEQRES 3 G 138 ILE ASN SER THR GLU ARG LYS ARG MET THR LEU LYS ASP SEQRES 4 G 138 ILE TYR THR TRP ILE GLU ASP HIS PHE PRO TYR PHE LYS SEQRES 5 G 138 HIS ILE ALA LYS PRO GLY TRP LYS ASN SER ILE ARG HIS SEQRES 6 G 138 ASN LEU SER LEU HIS ASP MET PHE VAL ARG GLU THR SER SEQRES 7 G 138 ALA ASN GLY LYS VAL SER PHE TRP THR ILE HIS PRO SER SEQRES 8 G 138 ALA ASN ARG TYR LEU THR LEU ASP GLN VAL PHE LYS PRO SEQRES 9 G 138 LEU ASP PRO GLY SER PRO GLN LEU PRO GLU HIS LEU GLU SEQRES 10 G 138 SER GLN GLN LYS ARG PRO ASN PRO GLU LEU ARG ARG ASN SEQRES 11 G 138 MET THR ILE LYS THR GLU LEU PRO SEQRES 1 B 24 DT DT DT DG DT DT DT DA DT DT DT DG DT SEQRES 2 B 24 DT DT DG DT DT DT DA DT DT DT DG SEQRES 1 C 24 DC DA DA DA DT DA DA DA DC DA DA DA DC SEQRES 2 C 24 DA DA DA DT DA DA DA DC DA DA DA HET GOL D 401 6 HET PO4 C 101 5 HETNAM GOL GLYCEROL HETNAM PO4 PHOSPHATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 8 GOL C3 H8 O3 FORMUL 9 PO4 O4 P 3- FORMUL 10 HOH *20(H2 O) HELIX 1 AA1 SER A 240 SER A 251 1 12 HELIX 2 AA2 THR A 258 PHE A 270 1 13 HELIX 3 AA3 PRO A 279 HIS A 292 1 14 HELIX 4 AA4 SER D 240 SER D 251 1 12 HELIX 5 AA5 THR D 258 PHE D 270 1 13 HELIX 6 AA6 PHE D 270 ILE D 276 1 7 HELIX 7 AA7 GLY D 280 HIS D 292 1 13 HELIX 8 AA8 SER G 240 SER G 251 1 12 HELIX 9 AA9 THR G 258 PHE G 270 1 13 HELIX 10 AB1 GLY G 280 HIS G 292 1 13 SHEET 1 AA1 2 PHE A 295 THR A 299 0 SHEET 2 AA1 2 SER A 306 ILE A 310 -1 O PHE A 307 N GLU A 298 SHEET 1 AA2 2 PHE D 295 THR D 299 0 SHEET 2 AA2 2 SER D 306 ILE D 310 -1 O PHE D 307 N GLU D 298 SHEET 1 AA3 2 PHE G 295 VAL G 296 0 SHEET 2 AA3 2 THR G 309 ILE G 310 -1 O THR G 309 N VAL G 296 CRYST1 72.210 45.610 213.494 90.00 95.82 90.00 I 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013848 0.000000 0.001411 0.00000 SCALE2 0.000000 0.021925 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004708 0.00000 CONECT 3714 3715 3716 CONECT 3715 3714 CONECT 3716 3714 3717 3718 CONECT 3717 3716 CONECT 3718 3716 3719 CONECT 3719 3718 CONECT 3720 3721 3722 3723 3724 CONECT 3721 3720 CONECT 3722 3720 CONECT 3723 3720 CONECT 3724 3720 MASTER 612 0 2 10 6 0 0 6 3737 7 11 41 END