data_9XYA # _entry.id 9XYA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.405 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9XYA pdb_00009xya 10.2210/pdb9xya/pdb WWPDB D_1000299512 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-09-10 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9XYA _pdbx_database_status.recvd_initial_deposition_date 2025-08-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'same citation' 9XY8 unspecified PDB 'same citation' 9PZ7 unspecified PDB 'same citation' 9PZH unspecified PDB 'same citation' 9Q0H unspecified PDB 'same citation' 9Q7V unspecified PDB 'same citation' 9Q7W unspecified PDB 'same citation' 9XY2 unspecified PDB 'same citation' 9Q7Z unspecified PDB 'same citation' 9XY1 unspecified PDB 'same citation' 9XY6 unspecified PDB 'same citation' 9XY5 unspecified PDB 'same citation' 9XY9 unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email bstoddard@fredhutch.org _pdbx_contact_author.name_first Barry _pdbx_contact_author.name_last Stoddard _pdbx_contact_author.name_mi L _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-5174-7858 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Werther, R.' 1 ? 'Stoddard, B.L.' 2 0000-0001-5174-7858 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Prediction, modeling and design of protein-DNA recognition via computational and machine learning approaches: accomplishments and remaining challenges ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Esler, M.A.' 1 ? primary 'Werther, R.' 2 ? primary 'Bradley, P.' 3 ? primary 'Stoddard, B.L.' 4 0000-0001-5174-7858 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man eI-OnuI_P456_GGC 34436.766 1 ? ? ? ? 2 polymer syn 'DNA (26-MER)' 7975.135 1 ? ? ? ? 3 polymer syn 'DNA (26-MER)' 7998.210 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 7 water nat water 18.015 86 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MASSRRESINPWILTGFADAEGSFLLRIRNNNKSSVGYSTELGFQITLHNKDKSILENIQSTWKVGVIANSGDNAVSLKV TRFEDLKVIIDHFEKYPLITQKLGDYKLFKQAFSVMENKEHLKENGIKELVRIKAKLNWGLTDELKKAFPENISKERSLI NKNIPNFKWLAGFTSGEGYFGVNLIKSKSKLGVQVQLVFKITQHIKDKNLMNSLITYLGCGYIRESNKSEFSWLNFVVTK FSDINDKIIPVFQENTLIGVKLEDFEDWCKVAKLIEEKKHLTESGLDEIKKIKLNMNKGR ; ;MASSRRESINPWILTGFADAEGSFLLRIRNNNKSSVGYSTELGFQITLHNKDKSILENIQSTWKVGVIANSGDNAVSLKV TRFEDLKVIIDHFEKYPLITQKLGDYKLFKQAFSVMENKEHLKENGIKELVRIKAKLNWGLTDELKKAFPENISKERSLI NKNIPNFKWLAGFTSGEGYFGVNLIKSKSKLGVQVQLVFKITQHIKDKNLMNSLITYLGCGYIRESNKSEFSWLNFVVTK FSDINDKIIPVFQENTLIGVKLEDFEDWCKVAKLIEEKKHLTESGLDEIKKIKLNMNKGR ; A ? 2 polydeoxyribonucleotide no no ;(DG)(DG)(DG)(DT)(DT)(DT)(DC)(DC)(DA)(DC)(DT)(DT)(DA)(DT)(DT)(DC)(DA)(DG)(DG)(DC) (DT)(DT)(DT)(DT)(DA)(DG) ; GGGTTTCCACTTATTCAGGCTTTTAG B ? 3 polydeoxyribonucleotide no no ;(DC)(DC)(DT)(DA)(DA)(DA)(DA)(DG)(DC)(DC)(DT)(DG)(DA)(DA)(DT)(DA)(DA)(DG)(DT)(DG) (DG)(DA)(DA)(DA)(DC)(DC) ; CCTAAAAGCCTGAATAAGTGGAAACC C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 GLYCEROL GOL 6 1,2-ETHANEDIOL EDO 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 SER n 1 5 ARG n 1 6 ARG n 1 7 GLU n 1 8 SER n 1 9 ILE n 1 10 ASN n 1 11 PRO n 1 12 TRP n 1 13 ILE n 1 14 LEU n 1 15 THR n 1 16 GLY n 1 17 PHE n 1 18 ALA n 1 19 ASP n 1 20 ALA n 1 21 GLU n 1 22 GLY n 1 23 SER n 1 24 PHE n 1 25 LEU n 1 26 LEU n 1 27 ARG n 1 28 ILE n 1 29 ARG n 1 30 ASN n 1 31 ASN n 1 32 ASN n 1 33 LYS n 1 34 SER n 1 35 SER n 1 36 VAL n 1 37 GLY n 1 38 TYR n 1 39 SER n 1 40 THR n 1 41 GLU n 1 42 LEU n 1 43 GLY n 1 44 PHE n 1 45 GLN n 1 46 ILE n 1 47 THR n 1 48 LEU n 1 49 HIS n 1 50 ASN n 1 51 LYS n 1 52 ASP n 1 53 LYS n 1 54 SER n 1 55 ILE n 1 56 LEU n 1 57 GLU n 1 58 ASN n 1 59 ILE n 1 60 GLN n 1 61 SER n 1 62 THR n 1 63 TRP n 1 64 LYS n 1 65 VAL n 1 66 GLY n 1 67 VAL n 1 68 ILE n 1 69 ALA n 1 70 ASN n 1 71 SER n 1 72 GLY n 1 73 ASP n 1 74 ASN n 1 75 ALA n 1 76 VAL n 1 77 SER n 1 78 LEU n 1 79 LYS n 1 80 VAL n 1 81 THR n 1 82 ARG n 1 83 PHE n 1 84 GLU n 1 85 ASP n 1 86 LEU n 1 87 LYS n 1 88 VAL n 1 89 ILE n 1 90 ILE n 1 91 ASP n 1 92 HIS n 1 93 PHE n 1 94 GLU n 1 95 LYS n 1 96 TYR n 1 97 PRO n 1 98 LEU n 1 99 ILE n 1 100 THR n 1 101 GLN n 1 102 LYS n 1 103 LEU n 1 104 GLY n 1 105 ASP n 1 106 TYR n 1 107 LYS n 1 108 LEU n 1 109 PHE n 1 110 LYS n 1 111 GLN n 1 112 ALA n 1 113 PHE n 1 114 SER n 1 115 VAL n 1 116 MET n 1 117 GLU n 1 118 ASN n 1 119 LYS n 1 120 GLU n 1 121 HIS n 1 122 LEU n 1 123 LYS n 1 124 GLU n 1 125 ASN n 1 126 GLY n 1 127 ILE n 1 128 LYS n 1 129 GLU n 1 130 LEU n 1 131 VAL n 1 132 ARG n 1 133 ILE n 1 134 LYS n 1 135 ALA n 1 136 LYS n 1 137 LEU n 1 138 ASN n 1 139 TRP n 1 140 GLY n 1 141 LEU n 1 142 THR n 1 143 ASP n 1 144 GLU n 1 145 LEU n 1 146 LYS n 1 147 LYS n 1 148 ALA n 1 149 PHE n 1 150 PRO n 1 151 GLU n 1 152 ASN n 1 153 ILE n 1 154 SER n 1 155 LYS n 1 156 GLU n 1 157 ARG n 1 158 SER n 1 159 LEU n 1 160 ILE n 1 161 ASN n 1 162 LYS n 1 163 ASN n 1 164 ILE n 1 165 PRO n 1 166 ASN n 1 167 PHE n 1 168 LYS n 1 169 TRP n 1 170 LEU n 1 171 ALA n 1 172 GLY n 1 173 PHE n 1 174 THR n 1 175 SER n 1 176 GLY n 1 177 GLU n 1 178 GLY n 1 179 TYR n 1 180 PHE n 1 181 GLY n 1 182 VAL n 1 183 ASN n 1 184 LEU n 1 185 ILE n 1 186 LYS n 1 187 SER n 1 188 LYS n 1 189 SER n 1 190 LYS n 1 191 LEU n 1 192 GLY n 1 193 VAL n 1 194 GLN n 1 195 VAL n 1 196 GLN n 1 197 LEU n 1 198 VAL n 1 199 PHE n 1 200 LYS n 1 201 ILE n 1 202 THR n 1 203 GLN n 1 204 HIS n 1 205 ILE n 1 206 LYS n 1 207 ASP n 1 208 LYS n 1 209 ASN n 1 210 LEU n 1 211 MET n 1 212 ASN n 1 213 SER n 1 214 LEU n 1 215 ILE n 1 216 THR n 1 217 TYR n 1 218 LEU n 1 219 GLY n 1 220 CYS n 1 221 GLY n 1 222 TYR n 1 223 ILE n 1 224 ARG n 1 225 GLU n 1 226 SER n 1 227 ASN n 1 228 LYS n 1 229 SER n 1 230 GLU n 1 231 PHE n 1 232 SER n 1 233 TRP n 1 234 LEU n 1 235 ASN n 1 236 PHE n 1 237 VAL n 1 238 VAL n 1 239 THR n 1 240 LYS n 1 241 PHE n 1 242 SER n 1 243 ASP n 1 244 ILE n 1 245 ASN n 1 246 ASP n 1 247 LYS n 1 248 ILE n 1 249 ILE n 1 250 PRO n 1 251 VAL n 1 252 PHE n 1 253 GLN n 1 254 GLU n 1 255 ASN n 1 256 THR n 1 257 LEU n 1 258 ILE n 1 259 GLY n 1 260 VAL n 1 261 LYS n 1 262 LEU n 1 263 GLU n 1 264 ASP n 1 265 PHE n 1 266 GLU n 1 267 ASP n 1 268 TRP n 1 269 CYS n 1 270 LYS n 1 271 VAL n 1 272 ALA n 1 273 LYS n 1 274 LEU n 1 275 ILE n 1 276 GLU n 1 277 GLU n 1 278 LYS n 1 279 LYS n 1 280 HIS n 1 281 LEU n 1 282 THR n 1 283 GLU n 1 284 SER n 1 285 GLY n 1 286 LEU n 1 287 ASP n 1 288 GLU n 1 289 ILE n 1 290 LYS n 1 291 LYS n 1 292 ILE n 1 293 LYS n 1 294 LEU n 1 295 ASN n 1 296 MET n 1 297 ASN n 1 298 LYS n 1 299 GLY n 1 300 ARG n 2 1 DG n 2 2 DG n 2 3 DG n 2 4 DT n 2 5 DT n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DA n 2 10 DC n 2 11 DT n 2 12 DT n 2 13 DA n 2 14 DT n 2 15 DT n 2 16 DC n 2 17 DA n 2 18 DG n 2 19 DG n 2 20 DC n 2 21 DT n 2 22 DT n 2 23 DT n 2 24 DT n 2 25 DA n 2 26 DG n 3 1 DC n 3 2 DC n 3 3 DT n 3 4 DA n 3 5 DA n 3 6 DA n 3 7 DA n 3 8 DG n 3 9 DC n 3 10 DC n 3 11 DT n 3 12 DG n 3 13 DA n 3 14 DA n 3 15 DT n 3 16 DA n 3 17 DA n 3 18 DG n 3 19 DT n 3 20 DG n 3 21 DG n 3 22 DA n 3 23 DA n 3 24 DA n 3 25 DC n 3 26 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 300 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 26 'synthetic construct' ? 32630 ? 3 1 sample 1 26 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 2 ? ? ? A . n A 1 2 ALA 2 3 ? ? ? A . n A 1 3 SER 3 4 ? ? ? A . n A 1 4 SER 4 5 ? ? ? A . n A 1 5 ARG 5 6 ? ? ? A . n A 1 6 ARG 6 7 7 ARG ARG A . n A 1 7 GLU 7 8 8 GLU GLU A . n A 1 8 SER 8 9 9 SER SER A . n A 1 9 ILE 9 10 10 ILE ILE A . n A 1 10 ASN 10 11 11 ASN ASN A . n A 1 11 PRO 11 12 12 PRO PRO A . n A 1 12 TRP 12 13 13 TRP TRP A . n A 1 13 ILE 13 14 14 ILE ILE A . n A 1 14 LEU 14 15 15 LEU LEU A . n A 1 15 THR 15 16 16 THR THR A . n A 1 16 GLY 16 17 17 GLY GLY A . n A 1 17 PHE 17 18 18 PHE PHE A . n A 1 18 ALA 18 19 19 ALA ALA A . n A 1 19 ASP 19 20 20 ASP ASP A . n A 1 20 ALA 20 21 21 ALA ALA A . n A 1 21 GLU 21 22 22 GLU GLU A . n A 1 22 GLY 22 23 23 GLY GLY A . n A 1 23 SER 23 24 24 SER SER A . n A 1 24 PHE 24 25 25 PHE PHE A . n A 1 25 LEU 25 26 26 LEU LEU A . n A 1 26 LEU 26 27 27 LEU LEU A . n A 1 27 ARG 27 28 28 ARG ARG A . n A 1 28 ILE 28 29 29 ILE ILE A . n A 1 29 ARG 29 30 30 ARG ARG A . n A 1 30 ASN 30 31 31 ASN ASN A . n A 1 31 ASN 31 32 32 ASN ASN A . n A 1 32 ASN 32 33 33 ASN ASN A . n A 1 33 LYS 33 34 34 LYS LYS A . n A 1 34 SER 34 35 35 SER SER A . n A 1 35 SER 35 36 36 SER SER A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 GLY 37 38 38 GLY GLY A . n A 1 38 TYR 38 39 39 TYR TYR A . n A 1 39 SER 39 40 40 SER SER A . n A 1 40 THR 40 41 41 THR THR A . n A 1 41 GLU 41 42 42 GLU GLU A . n A 1 42 LEU 42 43 43 LEU LEU A . n A 1 43 GLY 43 44 44 GLY GLY A . n A 1 44 PHE 44 45 45 PHE PHE A . n A 1 45 GLN 45 46 46 GLN GLN A . n A 1 46 ILE 46 47 47 ILE ILE A . n A 1 47 THR 47 48 48 THR THR A . n A 1 48 LEU 48 49 49 LEU LEU A . n A 1 49 HIS 49 50 50 HIS HIS A . n A 1 50 ASN 50 51 51 ASN ASN A . n A 1 51 LYS 51 52 52 LYS LYS A . n A 1 52 ASP 52 53 53 ASP ASP A . n A 1 53 LYS 53 54 54 LYS LYS A . n A 1 54 SER 54 55 55 SER SER A . n A 1 55 ILE 55 56 56 ILE ILE A . n A 1 56 LEU 56 57 57 LEU LEU A . n A 1 57 GLU 57 58 58 GLU GLU A . n A 1 58 ASN 58 59 59 ASN ASN A . n A 1 59 ILE 59 60 60 ILE ILE A . n A 1 60 GLN 60 61 61 GLN GLN A . n A 1 61 SER 61 62 62 SER SER A . n A 1 62 THR 62 63 63 THR THR A . n A 1 63 TRP 63 64 64 TRP TRP A . n A 1 64 LYS 64 65 65 LYS LYS A . n A 1 65 VAL 65 66 66 VAL VAL A . n A 1 66 GLY 66 67 67 GLY GLY A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 ILE 68 69 69 ILE ILE A . n A 1 69 ALA 69 70 70 ALA ALA A . n A 1 70 ASN 70 71 71 ASN ASN A . n A 1 71 SER 71 72 72 SER SER A . n A 1 72 GLY 72 73 73 GLY GLY A . n A 1 73 ASP 73 74 74 ASP ASP A . n A 1 74 ASN 74 75 75 ASN ASN A . n A 1 75 ALA 75 76 76 ALA ALA A . n A 1 76 VAL 76 77 77 VAL VAL A . n A 1 77 SER 77 78 78 SER SER A . n A 1 78 LEU 78 79 79 LEU LEU A . n A 1 79 LYS 79 80 80 LYS LYS A . n A 1 80 VAL 80 81 81 VAL VAL A . n A 1 81 THR 81 82 82 THR THR A . n A 1 82 ARG 82 83 83 ARG ARG A . n A 1 83 PHE 83 84 84 PHE PHE A . n A 1 84 GLU 84 85 85 GLU GLU A . n A 1 85 ASP 85 86 86 ASP ASP A . n A 1 86 LEU 86 87 87 LEU LEU A . n A 1 87 LYS 87 88 88 LYS LYS A . n A 1 88 VAL 88 89 89 VAL VAL A . n A 1 89 ILE 89 90 90 ILE ILE A . n A 1 90 ILE 90 91 91 ILE ILE A . n A 1 91 ASP 91 92 92 ASP ASP A . n A 1 92 HIS 92 93 93 HIS HIS A . n A 1 93 PHE 93 94 94 PHE PHE A . n A 1 94 GLU 94 95 95 GLU GLU A . n A 1 95 LYS 95 96 96 LYS LYS A . n A 1 96 TYR 96 97 97 TYR TYR A . n A 1 97 PRO 97 98 98 PRO PRO A . n A 1 98 LEU 98 99 99 LEU LEU A . n A 1 99 ILE 99 100 100 ILE ILE A . n A 1 100 THR 100 101 101 THR THR A . n A 1 101 GLN 101 102 102 GLN GLN A . n A 1 102 LYS 102 103 103 LYS LYS A . n A 1 103 LEU 103 104 104 LEU LEU A . n A 1 104 GLY 104 105 105 GLY GLY A . n A 1 105 ASP 105 106 106 ASP ASP A . n A 1 106 TYR 106 107 107 TYR TYR A . n A 1 107 LYS 107 108 108 LYS LYS A . n A 1 108 LEU 108 109 109 LEU LEU A . n A 1 109 PHE 109 110 110 PHE PHE A . n A 1 110 LYS 110 111 111 LYS LYS A . n A 1 111 GLN 111 112 112 GLN GLN A . n A 1 112 ALA 112 113 113 ALA ALA A . n A 1 113 PHE 113 114 114 PHE PHE A . n A 1 114 SER 114 115 115 SER SER A . n A 1 115 VAL 115 116 116 VAL VAL A . n A 1 116 MET 116 117 117 MET MET A . n A 1 117 GLU 117 118 118 GLU GLU A . n A 1 118 ASN 118 119 119 ASN ASN A . n A 1 119 LYS 119 120 120 LYS LYS A . n A 1 120 GLU 120 121 121 GLU GLU A . n A 1 121 HIS 121 122 122 HIS HIS A . n A 1 122 LEU 122 123 123 LEU LEU A . n A 1 123 LYS 123 124 124 LYS LYS A . n A 1 124 GLU 124 125 125 GLU GLU A . n A 1 125 ASN 125 126 126 ASN ASN A . n A 1 126 GLY 126 127 127 GLY GLY A . n A 1 127 ILE 127 128 128 ILE ILE A . n A 1 128 LYS 128 129 129 LYS LYS A . n A 1 129 GLU 129 130 130 GLU GLU A . n A 1 130 LEU 130 131 131 LEU LEU A . n A 1 131 VAL 131 132 132 VAL VAL A . n A 1 132 ARG 132 133 133 ARG ARG A . n A 1 133 ILE 133 134 134 ILE ILE A . n A 1 134 LYS 134 135 135 LYS LYS A . n A 1 135 ALA 135 136 136 ALA ALA A . n A 1 136 LYS 136 137 137 LYS LYS A . n A 1 137 LEU 137 138 138 LEU LEU A . n A 1 138 ASN 138 139 139 ASN ASN A . n A 1 139 TRP 139 140 140 TRP TRP A . n A 1 140 GLY 140 141 141 GLY GLY A . n A 1 141 LEU 141 142 142 LEU LEU A . n A 1 142 THR 142 143 143 THR THR A . n A 1 143 ASP 143 144 144 ASP ASP A . n A 1 144 GLU 144 145 145 GLU GLU A . n A 1 145 LEU 145 146 146 LEU LEU A . n A 1 146 LYS 146 147 147 LYS LYS A . n A 1 147 LYS 147 148 148 LYS LYS A . n A 1 148 ALA 148 149 149 ALA ALA A . n A 1 149 PHE 149 150 150 PHE PHE A . n A 1 150 PRO 150 151 151 PRO PRO A . n A 1 151 GLU 151 152 152 GLU GLU A . n A 1 152 ASN 152 153 153 ASN ASN A . n A 1 153 ILE 153 154 154 ILE ILE A . n A 1 154 SER 154 155 155 SER SER A . n A 1 155 LYS 155 156 156 LYS LYS A . n A 1 156 GLU 156 157 157 GLU GLU A . n A 1 157 ARG 157 158 158 ARG ARG A . n A 1 158 SER 158 159 159 SER SER A . n A 1 159 LEU 159 160 160 LEU LEU A . n A 1 160 ILE 160 161 161 ILE ILE A . n A 1 161 ASN 161 162 162 ASN ASN A . n A 1 162 LYS 162 163 163 LYS LYS A . n A 1 163 ASN 163 164 164 ASN ASN A . n A 1 164 ILE 164 165 165 ILE ILE A . n A 1 165 PRO 165 166 166 PRO PRO A . n A 1 166 ASN 166 167 167 ASN ASN A . n A 1 167 PHE 167 168 168 PHE PHE A . n A 1 168 LYS 168 169 169 LYS LYS A . n A 1 169 TRP 169 170 170 TRP TRP A . n A 1 170 LEU 170 171 171 LEU LEU A . n A 1 171 ALA 171 172 172 ALA ALA A . n A 1 172 GLY 172 173 173 GLY GLY A . n A 1 173 PHE 173 174 174 PHE PHE A . n A 1 174 THR 174 175 175 THR THR A . n A 1 175 SER 175 176 176 SER SER A . n A 1 176 GLY 176 177 177 GLY GLY A . n A 1 177 GLU 177 178 178 GLU GLU A . n A 1 178 GLY 178 179 179 GLY GLY A . n A 1 179 TYR 179 180 180 TYR TYR A . n A 1 180 PHE 180 181 181 PHE PHE A . n A 1 181 GLY 181 182 182 GLY GLY A . n A 1 182 VAL 182 183 183 VAL VAL A . n A 1 183 ASN 183 184 184 ASN ASN A . n A 1 184 LEU 184 185 185 LEU LEU A . n A 1 185 ILE 185 186 186 ILE ILE A . n A 1 186 LYS 186 187 187 LYS LYS A . n A 1 187 SER 187 188 188 SER SER A . n A 1 188 LYS 188 189 189 LYS LYS A . n A 1 189 SER 189 190 190 SER SER A . n A 1 190 LYS 190 191 191 LYS LYS A . n A 1 191 LEU 191 192 192 LEU LEU A . n A 1 192 GLY 192 193 193 GLY GLY A . n A 1 193 VAL 193 194 194 VAL VAL A . n A 1 194 GLN 194 195 195 GLN GLN A . n A 1 195 VAL 195 196 196 VAL VAL A . n A 1 196 GLN 196 197 197 GLN GLN A . n A 1 197 LEU 197 198 198 LEU LEU A . n A 1 198 VAL 198 199 199 VAL VAL A . n A 1 199 PHE 199 200 200 PHE PHE A . n A 1 200 LYS 200 201 201 LYS LYS A . n A 1 201 ILE 201 202 202 ILE ILE A . n A 1 202 THR 202 203 203 THR THR A . n A 1 203 GLN 203 204 204 GLN GLN A . n A 1 204 HIS 204 205 205 HIS HIS A . n A 1 205 ILE 205 206 206 ILE ILE A . n A 1 206 LYS 206 207 207 LYS LYS A . n A 1 207 ASP 207 208 208 ASP ASP A . n A 1 208 LYS 208 209 209 LYS LYS A . n A 1 209 ASN 209 210 210 ASN ASN A . n A 1 210 LEU 210 211 211 LEU LEU A . n A 1 211 MET 211 212 212 MET MET A . n A 1 212 ASN 212 213 213 ASN ASN A . n A 1 213 SER 213 214 214 SER SER A . n A 1 214 LEU 214 215 215 LEU LEU A . n A 1 215 ILE 215 216 216 ILE ILE A . n A 1 216 THR 216 217 217 THR THR A . n A 1 217 TYR 217 218 218 TYR TYR A . n A 1 218 LEU 218 219 219 LEU LEU A . n A 1 219 GLY 219 220 220 GLY GLY A . n A 1 220 CYS 220 221 221 CYS CYS A . n A 1 221 GLY 221 222 222 GLY GLY A . n A 1 222 TYR 222 223 223 TYR TYR A . n A 1 223 ILE 223 224 224 ILE ILE A . n A 1 224 ARG 224 225 225 ARG ARG A . n A 1 225 GLU 225 226 226 GLU GLU A . n A 1 226 SER 226 227 227 SER SER A . n A 1 227 ASN 227 228 228 ASN ASN A . n A 1 228 LYS 228 229 229 LYS LYS A . n A 1 229 SER 229 230 230 SER SER A . n A 1 230 GLU 230 231 231 GLU GLU A . n A 1 231 PHE 231 232 232 PHE PHE A . n A 1 232 SER 232 233 233 SER SER A . n A 1 233 TRP 233 234 234 TRP TRP A . n A 1 234 LEU 234 235 235 LEU LEU A . n A 1 235 ASN 235 236 236 ASN ASN A . n A 1 236 PHE 236 237 237 PHE PHE A . n A 1 237 VAL 237 238 238 VAL VAL A . n A 1 238 VAL 238 239 239 VAL VAL A . n A 1 239 THR 239 240 240 THR THR A . n A 1 240 LYS 240 241 241 LYS LYS A . n A 1 241 PHE 241 242 242 PHE PHE A . n A 1 242 SER 242 243 243 SER SER A . n A 1 243 ASP 243 244 244 ASP ASP A . n A 1 244 ILE 244 245 245 ILE ILE A . n A 1 245 ASN 245 246 246 ASN ASN A . n A 1 246 ASP 246 247 247 ASP ASP A . n A 1 247 LYS 247 248 248 LYS LYS A . n A 1 248 ILE 248 249 249 ILE ILE A . n A 1 249 ILE 249 250 250 ILE ILE A . n A 1 250 PRO 250 251 251 PRO PRO A . n A 1 251 VAL 251 252 252 VAL VAL A . n A 1 252 PHE 252 253 253 PHE PHE A . n A 1 253 GLN 253 254 254 GLN GLN A . n A 1 254 GLU 254 255 255 GLU GLU A . n A 1 255 ASN 255 256 256 ASN ASN A . n A 1 256 THR 256 257 257 THR THR A . n A 1 257 LEU 257 258 258 LEU LEU A . n A 1 258 ILE 258 259 259 ILE ILE A . n A 1 259 GLY 259 260 260 GLY GLY A . n A 1 260 VAL 260 261 261 VAL VAL A . n A 1 261 LYS 261 262 262 LYS LYS A . n A 1 262 LEU 262 263 263 LEU LEU A . n A 1 263 GLU 263 264 264 GLU GLU A . n A 1 264 ASP 264 265 265 ASP ASP A . n A 1 265 PHE 265 266 266 PHE PHE A . n A 1 266 GLU 266 267 267 GLU GLU A . n A 1 267 ASP 267 268 268 ASP ASP A . n A 1 268 TRP 268 269 269 TRP TRP A . n A 1 269 CYS 269 270 270 CYS CYS A . n A 1 270 LYS 270 271 271 LYS LYS A . n A 1 271 VAL 271 272 272 VAL VAL A . n A 1 272 ALA 272 273 273 ALA ALA A . n A 1 273 LYS 273 274 274 LYS LYS A . n A 1 274 LEU 274 275 275 LEU LEU A . n A 1 275 ILE 275 276 276 ILE ILE A . n A 1 276 GLU 276 277 277 GLU GLU A . n A 1 277 GLU 277 278 278 GLU GLU A . n A 1 278 LYS 278 279 279 LYS LYS A . n A 1 279 LYS 279 280 280 LYS LYS A . n A 1 280 HIS 280 281 281 HIS HIS A . n A 1 281 LEU 281 282 282 LEU LEU A . n A 1 282 THR 282 283 283 THR THR A . n A 1 283 GLU 283 284 284 GLU GLU A . n A 1 284 SER 284 285 285 SER SER A . n A 1 285 GLY 285 286 286 GLY GLY A . n A 1 286 LEU 286 287 287 LEU LEU A . n A 1 287 ASP 287 288 288 ASP ASP A . n A 1 288 GLU 288 289 289 GLU GLU A . n A 1 289 ILE 289 290 290 ILE ILE A . n A 1 290 LYS 290 291 291 LYS LYS A . n A 1 291 LYS 291 292 292 LYS LYS A . n A 1 292 ILE 292 293 293 ILE ILE A . n A 1 293 LYS 293 294 294 LYS LYS A . n A 1 294 LEU 294 295 295 LEU LEU A . n A 1 295 ASN 295 296 296 ASN ASN A . n A 1 296 MET 296 297 297 MET MET A . n A 1 297 ASN 297 298 298 ASN ASN A . n A 1 298 LYS 298 299 299 LYS LYS A . n A 1 299 GLY 299 300 300 GLY GLY A . n A 1 300 ARG 300 301 301 ARG ARG A . n B 2 1 DG 1 -1 -1 DG DG B . n B 2 2 DG 2 0 0 DG DG B . n B 2 3 DG 3 1 1 DG DG B . n B 2 4 DT 4 2 2 DT DT B . n B 2 5 DT 5 3 3 DT DT B . n B 2 6 DT 6 4 4 DT DT B . n B 2 7 DC 7 5 5 DC DC B . n B 2 8 DC 8 6 6 DC DC B . n B 2 9 DA 9 7 7 DA DA B . n B 2 10 DC 10 8 8 DC DC B . n B 2 11 DT 11 9 9 DT DT B . n B 2 12 DT 12 10 10 DT DT B . n B 2 13 DA 13 11 11 DA DA B . n B 2 14 DT 14 12 12 DT DT B . n B 2 15 DT 15 13 13 DT DT B . n B 2 16 DC 16 14 14 DC DC B . n B 2 17 DA 17 15 15 DA DA B . n B 2 18 DG 18 16 16 DG DG B . n B 2 19 DG 19 17 17 DG DG B . n B 2 20 DC 20 18 18 DC DC B . n B 2 21 DT 21 19 19 DT DT B . n B 2 22 DT 22 20 20 DT DT B . n B 2 23 DT 23 21 21 DT DT B . n B 2 24 DT 24 22 22 DT DT B . n B 2 25 DA 25 23 23 DA DA B . n B 2 26 DG 26 24 24 DG DG B . n C 3 1 DC 1 1 1 DC DC C . n C 3 2 DC 2 2 2 DC DC C . n C 3 3 DT 3 3 3 DT DT C . n C 3 4 DA 4 4 4 DA DA C . n C 3 5 DA 5 5 5 DA DA C . n C 3 6 DA 6 6 6 DA DA C . n C 3 7 DA 7 7 7 DA DA C . n C 3 8 DG 8 8 8 DG DG C . n C 3 9 DC 9 9 9 DC DC C . n C 3 10 DC 10 10 10 DC DC C . n C 3 11 DT 11 11 11 DT DT C . n C 3 12 DG 12 12 12 DG DG C . n C 3 13 DA 13 13 13 DA DA C . n C 3 14 DA 14 14 14 DA DA C . n C 3 15 DT 15 15 15 DT DT C . n C 3 16 DA 16 16 16 DA DA C . n C 3 17 DA 17 17 17 DA DA C . n C 3 18 DG 18 18 18 DG DG C . n C 3 19 DT 19 19 19 DT DT C . n C 3 20 DG 20 20 20 DG DG C . n C 3 21 DG 21 21 21 DG DG C . n C 3 22 DA 22 22 22 DA DA C . n C 3 23 DA 23 23 23 DA DA C . n C 3 24 DA 24 24 24 DA DA C . n C 3 25 DC 25 25 25 DC DC C . n C 3 26 DC 26 26 26 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 401 1 CA CA A . E 4 CA 1 402 2 CA CA A . F 5 GOL 1 403 1 GOL GOL A . G 6 EDO 1 404 1 EDO EDO A . H 7 HOH 1 501 105 HOH HOH A . H 7 HOH 2 502 108 HOH HOH A . H 7 HOH 3 503 112 HOH HOH A . H 7 HOH 4 504 18 HOH HOH A . H 7 HOH 5 505 67 HOH HOH A . H 7 HOH 6 506 57 HOH HOH A . H 7 HOH 7 507 9 HOH HOH A . H 7 HOH 8 508 89 HOH HOH A . H 7 HOH 9 509 84 HOH HOH A . H 7 HOH 10 510 92 HOH HOH A . H 7 HOH 11 511 29 HOH HOH A . H 7 HOH 12 512 79 HOH HOH A . H 7 HOH 13 513 35 HOH HOH A . H 7 HOH 14 514 66 HOH HOH A . H 7 HOH 15 515 20 HOH HOH A . H 7 HOH 16 516 101 HOH HOH A . H 7 HOH 17 517 96 HOH HOH A . H 7 HOH 18 518 2 HOH HOH A . H 7 HOH 19 519 43 HOH HOH A . H 7 HOH 20 520 107 HOH HOH A . H 7 HOH 21 521 7 HOH HOH A . H 7 HOH 22 522 25 HOH HOH A . H 7 HOH 23 523 38 HOH HOH A . H 7 HOH 24 524 103 HOH HOH A . H 7 HOH 25 525 10 HOH HOH A . H 7 HOH 26 526 32 HOH HOH A . H 7 HOH 27 527 8 HOH HOH A . H 7 HOH 28 528 16 HOH HOH A . H 7 HOH 29 529 21 HOH HOH A . H 7 HOH 30 530 68 HOH HOH A . H 7 HOH 31 531 6 HOH HOH A . H 7 HOH 32 532 62 HOH HOH A . H 7 HOH 33 533 26 HOH HOH A . H 7 HOH 34 534 87 HOH HOH A . H 7 HOH 35 535 46 HOH HOH A . H 7 HOH 36 536 72 HOH HOH A . H 7 HOH 37 537 70 HOH HOH A . H 7 HOH 38 538 31 HOH HOH A . H 7 HOH 39 539 110 HOH HOH A . H 7 HOH 40 540 34 HOH HOH A . H 7 HOH 41 541 53 HOH HOH A . H 7 HOH 42 542 51 HOH HOH A . H 7 HOH 43 543 93 HOH HOH A . H 7 HOH 44 544 76 HOH HOH A . H 7 HOH 45 545 56 HOH HOH A . H 7 HOH 46 546 65 HOH HOH A . H 7 HOH 47 547 95 HOH HOH A . H 7 HOH 48 548 80 HOH HOH A . H 7 HOH 49 549 13 HOH HOH A . H 7 HOH 50 550 28 HOH HOH A . H 7 HOH 51 551 27 HOH HOH A . H 7 HOH 52 552 73 HOH HOH A . H 7 HOH 53 553 111 HOH HOH A . H 7 HOH 54 554 98 HOH HOH A . H 7 HOH 55 555 97 HOH HOH A . H 7 HOH 56 556 75 HOH HOH A . H 7 HOH 57 557 59 HOH HOH A . I 7 HOH 1 101 61 HOH HOH B . I 7 HOH 2 102 12 HOH HOH B . I 7 HOH 3 103 99 HOH HOH B . I 7 HOH 4 104 69 HOH HOH B . I 7 HOH 5 105 17 HOH HOH B . I 7 HOH 6 106 71 HOH HOH B . I 7 HOH 7 107 42 HOH HOH B . I 7 HOH 8 108 81 HOH HOH B . I 7 HOH 9 109 47 HOH HOH B . I 7 HOH 10 110 100 HOH HOH B . I 7 HOH 11 111 94 HOH HOH B . I 7 HOH 12 112 40 HOH HOH B . I 7 HOH 13 113 78 HOH HOH B . I 7 HOH 14 114 41 HOH HOH B . I 7 HOH 15 115 11 HOH HOH B . I 7 HOH 16 116 91 HOH HOH B . J 7 HOH 1 101 15 HOH HOH C . J 7 HOH 2 102 23 HOH HOH C . J 7 HOH 3 103 19 HOH HOH C . J 7 HOH 4 104 36 HOH HOH C . J 7 HOH 5 105 58 HOH HOH C . J 7 HOH 6 106 37 HOH HOH C . J 7 HOH 7 107 49 HOH HOH C . J 7 HOH 8 108 63 HOH HOH C . J 7 HOH 9 109 3 HOH HOH C . J 7 HOH 10 110 22 HOH HOH C . J 7 HOH 11 111 82 HOH HOH C . J 7 HOH 12 112 33 HOH HOH C . J 7 HOH 13 113 90 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 7 ? CG ? A ARG 6 CG 2 1 Y 1 A ARG 7 ? CD ? A ARG 6 CD 3 1 Y 1 A ARG 7 ? NE ? A ARG 6 NE 4 1 Y 1 A ARG 7 ? CZ ? A ARG 6 CZ 5 1 Y 1 A ARG 7 ? NH1 ? A ARG 6 NH1 6 1 Y 1 A ARG 7 ? NH2 ? A ARG 6 NH2 7 1 Y 1 A GLU 8 ? CG ? A GLU 7 CG 8 1 Y 1 A GLU 8 ? CD ? A GLU 7 CD 9 1 Y 1 A GLU 8 ? OE1 ? A GLU 7 OE1 10 1 Y 1 A GLU 8 ? OE2 ? A GLU 7 OE2 11 1 Y 1 A ASN 33 ? CG ? A ASN 32 CG 12 1 Y 1 A ASN 33 ? OD1 ? A ASN 32 OD1 13 1 Y 1 A ASN 33 ? ND2 ? A ASN 32 ND2 14 1 Y 1 A GLU 121 ? CG ? A GLU 120 CG 15 1 Y 1 A GLU 121 ? CD ? A GLU 120 CD 16 1 Y 1 A GLU 121 ? OE1 ? A GLU 120 OE1 17 1 Y 1 A GLU 121 ? OE2 ? A GLU 120 OE2 18 1 Y 1 A LYS 124 ? CG ? A LYS 123 CG 19 1 Y 1 A LYS 124 ? CD ? A LYS 123 CD 20 1 Y 1 A LYS 124 ? CE ? A LYS 123 CE 21 1 Y 1 A LYS 124 ? NZ ? A LYS 123 NZ 22 1 Y 1 A LYS 147 ? CG ? A LYS 146 CG 23 1 Y 1 A LYS 147 ? CD ? A LYS 146 CD 24 1 Y 1 A LYS 147 ? CE ? A LYS 146 CE 25 1 Y 1 A LYS 147 ? NZ ? A LYS 146 NZ 26 1 Y 1 A LYS 156 ? CG ? A LYS 155 CG 27 1 Y 1 A LYS 156 ? CD ? A LYS 155 CD 28 1 Y 1 A LYS 156 ? CE ? A LYS 155 CE 29 1 Y 1 A LYS 156 ? NZ ? A LYS 155 NZ 30 1 Y 1 A LEU 160 ? CG ? A LEU 159 CG 31 1 Y 1 A LEU 160 ? CD1 ? A LEU 159 CD1 32 1 Y 1 A LEU 160 ? CD2 ? A LEU 159 CD2 33 1 Y 1 A LYS 187 ? CG ? A LYS 186 CG 34 1 Y 1 A LYS 187 ? CD ? A LYS 186 CD 35 1 Y 1 A LYS 187 ? CE ? A LYS 186 CE 36 1 Y 1 A LYS 187 ? NZ ? A LYS 186 NZ 37 1 Y 1 A SER 188 ? OG ? A SER 187 OG 38 1 Y 1 A LYS 189 ? CG ? A LYS 188 CG 39 1 Y 1 A LYS 189 ? CD ? A LYS 188 CD 40 1 Y 1 A LYS 189 ? CE ? A LYS 188 CE 41 1 Y 1 A LYS 189 ? NZ ? A LYS 188 NZ 42 1 Y 1 A LYS 191 ? CG ? A LYS 190 CG 43 1 Y 1 A LYS 191 ? CD ? A LYS 190 CD 44 1 Y 1 A LYS 191 ? CE ? A LYS 190 CE 45 1 Y 1 A LYS 191 ? NZ ? A LYS 190 NZ 46 1 Y 1 A LYS 209 ? CG ? A LYS 208 CG 47 1 Y 1 A LYS 209 ? CD ? A LYS 208 CD 48 1 Y 1 A LYS 209 ? CE ? A LYS 208 CE 49 1 Y 1 A LYS 209 ? NZ ? A LYS 208 NZ 50 1 Y 1 A LYS 229 ? CG ? A LYS 228 CG 51 1 Y 1 A LYS 229 ? CD ? A LYS 228 CD 52 1 Y 1 A LYS 229 ? CE ? A LYS 228 CE 53 1 Y 1 A LYS 229 ? NZ ? A LYS 228 NZ 54 1 Y 1 A SER 230 ? OG ? A SER 229 OG 55 1 Y 1 A GLU 231 ? CG ? A GLU 230 CG 56 1 Y 1 A GLU 231 ? CD ? A GLU 230 CD 57 1 Y 1 A GLU 231 ? OE1 ? A GLU 230 OE1 58 1 Y 1 A GLU 231 ? OE2 ? A GLU 230 OE2 59 1 Y 1 A LYS 271 ? CG ? A LYS 270 CG 60 1 Y 1 A LYS 271 ? CD ? A LYS 270 CD 61 1 Y 1 A LYS 271 ? CE ? A LYS 270 CE 62 1 Y 1 A LYS 271 ? NZ ? A LYS 270 NZ 63 1 Y 1 A GLU 284 ? CG ? A GLU 283 CG 64 1 Y 1 A GLU 284 ? CD ? A GLU 283 CD 65 1 Y 1 A GLU 284 ? OE1 ? A GLU 283 OE1 66 1 Y 1 A GLU 284 ? OE2 ? A GLU 283 OE2 67 1 Y 1 A LYS 292 ? CG ? A LYS 291 CG 68 1 Y 1 A LYS 292 ? CD ? A LYS 291 CD 69 1 Y 1 A LYS 292 ? CE ? A LYS 291 CE 70 1 Y 1 A LYS 292 ? NZ ? A LYS 291 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . ? 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11.1_2575 ? 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 ? 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . ? 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9XYA _cell.details ? _cell.formula_units_Z ? _cell.length_a 39.557 _cell.length_a_esd ? _cell.length_b 75.838 _cell.length_b_esd ? _cell.length_c 166.799 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9XYA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9XYA _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM HEPES pH 6.5, 200mM ammonium sulfate, 28% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 108 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-12-08 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 49.230 _reflns.entry_id 9XYA _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 22748 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.300 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.967 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.109 _reflns.pdbx_Rpim_I_all 0.030 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.105 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 2.320 2.400 ? ? ? ? ? ? 4097 ? ? ? ? ? ? ? ? ? ? ? 10.000 0.684 ? ? 0.892 0.268 ? 1 1 0.877 ? ? 99.200 ? 0.849 ? ? ? ? ? ? ? ? ? 2.400 2.500 ? ? ? ? ? ? 4258 ? ? ? ? ? ? ? ? ? ? ? 12.300 0.702 ? ? 0.698 0.196 ? 2 1 0.950 ? ? 99.700 ? 0.670 ? ? ? ? ? ? ? ? ? 2.500 2.610 ? ? ? ? ? ? 4237 ? ? ? ? ? ? ? ? ? ? ? 14.000 0.748 ? ? 0.603 0.160 ? 3 1 0.976 ? ? 100.000 ? 0.581 ? ? ? ? ? ? ? ? ? 2.610 2.750 ? ? ? ? ? ? 4202 ? ? ? ? ? ? ? ? ? ? ? 14.200 0.806 ? ? 0.457 0.120 ? 4 1 0.981 ? ? 100.000 ? 0.441 ? ? ? ? ? ? ? ? ? 2.750 2.920 ? ? ? ? ? ? 4251 ? ? ? ? ? ? ? ? ? ? ? 14.300 0.876 ? ? 0.295 0.078 ? 5 1 0.995 ? ? 100.000 ? 0.285 ? ? ? ? ? ? ? ? ? 2.920 3.150 ? ? ? ? ? ? 4257 ? ? ? ? ? ? ? ? ? ? ? 14.200 1.036 ? ? 0.173 0.046 ? 6 1 0.997 ? ? 100.000 ? 0.167 ? ? ? ? ? ? ? ? ? 3.150 3.470 ? ? ? ? ? ? 4182 ? ? ? ? ? ? ? ? ? ? ? 13.800 1.171 ? ? 0.099 0.027 ? 7 1 0.998 ? ? 99.000 ? 0.095 ? ? ? ? ? ? ? ? ? 3.470 3.970 ? ? ? ? ? ? 4259 ? ? ? ? ? ? ? ? ? ? ? 13.700 1.219 ? ? 0.086 0.024 ? 8 1 0.997 ? ? 99.900 ? 0.082 ? ? ? ? ? ? ? ? ? 3.970 5.000 ? ? ? ? ? ? 4245 ? ? ? ? ? ? ? ? ? ? ? 13.400 1.215 ? ? 0.094 0.026 ? 9 1 0.996 ? ? 99.700 ? 0.090 ? ? ? ? ? ? ? ? ? 5.000 50.000 ? ? ? ? ? ? 4221 ? ? ? ? ? ? ? ? ? ? ? 12.900 1.095 ? ? 0.067 0.018 ? 10 1 0.999 ? ? 99.400 ? 0.064 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 94.780 _refine.B_iso_mean 51.4628 _refine.B_iso_min 31.940 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9XYA _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.3030 _refine.ls_d_res_low 44.8400 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22637 _refine.ls_number_reflns_R_free 1996 _refine.ls_number_reflns_R_work 20641 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.1300 _refine.ls_percent_reflns_R_free 8.8200 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2177 _refine.ls_R_factor_R_free 0.2687 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2127 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.9400 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.3030 _refine_hist.d_res_low 44.8400 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 3492 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 347 _refine_hist.pdbx_B_iso_mean_ligand 68.01 _refine_hist.pdbx_B_iso_mean_solvent 44.95 _refine_hist.pdbx_number_atoms_protein 2320 _refine_hist.pdbx_number_atoms_nucleic_acid 1060 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 3560 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.894 ? 5029 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.048 ? 569 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 455 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 20.436 ? 1924 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.303 2.3605 . . 113 1165 80.0000 . . . 0.0000 0.2911 . . . . . . . . . . . . . . . 0.3780 'X-RAY DIFFRACTION' 2.3605 2.4243 . . 141 1461 99.0000 . . . 0.0000 0.2729 . . . . . . . . . . . . . . . 0.3635 'X-RAY DIFFRACTION' 2.4243 2.4956 . . 144 1495 100.0000 . . . 0.0000 0.2581 . . . . . . . . . . . . . . . 0.3244 'X-RAY DIFFRACTION' 2.4956 2.5762 . . 140 1441 100.0000 . . . 0.0000 0.2616 . . . . . . . . . . . . . . . 0.3564 'X-RAY DIFFRACTION' 2.5762 2.6683 . . 146 1507 100.0000 . . . 0.0000 0.2726 . . . . . . . . . . . . . . . 0.3347 'X-RAY DIFFRACTION' 2.6683 2.7751 . . 142 1461 100.0000 . . . 0.0000 0.2597 . . . . . . . . . . . . . . . 0.3426 'X-RAY DIFFRACTION' 2.7751 2.9014 . . 142 1488 100.0000 . . . 0.0000 0.2729 . . . . . . . . . . . . . . . 0.3189 'X-RAY DIFFRACTION' 2.9014 3.0543 . . 146 1505 100.0000 . . . 0.0000 0.2615 . . . . . . . . . . . . . . . 0.3305 'X-RAY DIFFRACTION' 3.0543 3.2456 . . 139 1451 99.0000 . . . 0.0000 0.2505 . . . . . . . . . . . . . . . 0.3256 'X-RAY DIFFRACTION' 3.2456 3.4961 . . 143 1475 98.0000 . . . 0.0000 0.2152 . . . . . . . . . . . . . . . 0.2575 'X-RAY DIFFRACTION' 3.4961 3.8478 . . 146 1509 99.0000 . . . 0.0000 0.2088 . . . . . . . . . . . . . . . 0.2770 'X-RAY DIFFRACTION' 3.8478 4.4041 . . 148 1521 100.0000 . . . 0.0000 0.1881 . . . . . . . . . . . . . . . 0.2417 'X-RAY DIFFRACTION' 4.4041 5.5471 . . 149 1535 100.0000 . . . 0.0000 0.1792 . . . . . . . . . . . . . . . 0.2319 'X-RAY DIFFRACTION' 5.5471 44.8 . . 157 1627 99.0000 . . . 0.0000 0.1747 . . . . . . . . . . . . . . . 0.2045 # _struct.entry_id 9XYA _struct.title 'One of a series of engineered variants of I-OnuI meganuclease targeting altered DNA target sequence' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9XYA _struct_keywords.text 'meganuclease, structure prediction, protein engineering, DNA BINDING PROTEIN-DNA complex, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 7 ? J N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9XYA 9XYA ? 1 ? 1 2 PDB 9XYA 9XYA ? 2 ? 1 3 PDB 9XYA 9XYA ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9XYA A 1 ? 300 ? 9XYA 2 ? 301 ? 2 301 2 2 9XYA B 1 ? 26 ? 9XYA -1 ? 24 ? -1 24 3 3 9XYA C 1 ? 26 ? 9XYA 1 ? 26 ? 1 26 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8820 ? 1 MORE -84 ? 1 'SSA (A^2)' 18600 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 10 ? GLU A 21 ? ASN A 11 GLU A 22 1 ? 12 HELX_P HELX_P2 AA2 ASP A 52 ? LYS A 64 ? ASP A 53 LYS A 65 1 ? 13 HELX_P HELX_P3 AA3 ARG A 82 ? TYR A 96 ? ARG A 83 TYR A 97 1 ? 15 HELX_P HELX_P4 AA4 GLN A 101 ? ASN A 118 ? GLN A 102 ASN A 119 1 ? 18 HELX_P HELX_P5 AA5 LYS A 119 ? LEU A 122 ? LYS A 120 LEU A 123 5 ? 4 HELX_P HELX_P6 AA6 LYS A 123 ? ALA A 135 ? LYS A 124 ALA A 136 1 ? 13 HELX_P HELX_P7 AA7 THR A 142 ? LYS A 147 ? THR A 143 LYS A 148 1 ? 6 HELX_P HELX_P8 AA8 ASN A 166 ? GLU A 177 ? ASN A 167 GLU A 178 1 ? 12 HELX_P HELX_P9 AA9 ASP A 207 ? GLY A 219 ? ASP A 208 GLY A 220 1 ? 13 HELX_P HELX_P10 AB1 LYS A 240 ? ASN A 255 ? LYS A 241 ASN A 256 1 ? 16 HELX_P HELX_P11 AB2 VAL A 260 ? GLU A 277 ? VAL A 261 GLU A 278 1 ? 18 HELX_P HELX_P12 AB3 LYS A 278 ? LEU A 281 ? LYS A 279 LEU A 282 5 ? 4 HELX_P HELX_P13 AB4 THR A 282 ? ASN A 295 ? THR A 283 ASN A 296 1 ? 14 HELX_P HELX_P14 AB5 MET A 296 ? ARG A 300 ? MET A 297 ARG A 301 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ALA 20 O ? ? ? 1_555 E CA . CA ? ? A ALA 21 A CA 402 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc2 metalc ? ? A GLU 21 OE2 ? ? ? 1_555 D CA . CA ? ? A GLU 22 A CA 401 1_555 ? ? ? ? ? ? ? 2.321 ? ? metalc3 metalc ? ? A GLY 176 O ? ? ? 1_555 D CA . CA ? ? A GLY 177 A CA 401 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc4 metalc ? ? A GLU 177 OE2 ? ? ? 1_555 E CA . CA ? ? A GLU 178 A CA 402 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc5 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 401 A HOH 525 1_555 ? ? ? ? ? ? ? 2.383 ? ? metalc6 metalc ? ? D CA . CA ? ? ? 1_555 B DA 17 OP2 ? ? A CA 401 B DA 15 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc7 metalc ? ? D CA . CA ? ? ? 1_555 C DT 15 OP1 ? ? A CA 401 C DT 15 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc8 metalc ? ? D CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 401 C HOH 113 1_555 ? ? ? ? ? ? ? 2.536 ? ? metalc9 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 402 A HOH 527 1_555 ? ? ? ? ? ? ? 2.415 ? ? metalc10 metalc ? ? E CA . CA ? ? ? 1_555 B DC 16 OP1 ? ? A CA 402 B DC 14 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc11 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 402 B HOH 116 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc12 metalc ? ? E CA . CA ? ? ? 1_555 C DA 16 OP2 ? ? A CA 402 C DA 16 1_555 ? ? ? ? ? ? ? 2.275 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 26 N3 ? ? B DG 0 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 26 O2 ? ? B DG 0 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 26 N4 ? ? B DG 0 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 25 N3 ? ? B DG 1 C DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 25 O2 ? ? B DG 1 C DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 25 N4 ? ? B DG 1 C DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 24 N1 ? ? B DT 2 C DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 24 N6 ? ? B DT 2 C DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 23 N1 ? ? B DT 3 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 23 N6 ? ? B DT 3 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 22 N1 ? ? B DT 4 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 22 N6 ? ? B DT 4 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 21 N1 ? ? B DC 5 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 21 O6 ? ? B DC 5 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 21 N2 ? ? B DC 5 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 20 N1 ? ? B DC 6 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 20 O6 ? ? B DC 6 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 20 N2 ? ? B DC 6 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 19 N3 ? ? B DA 7 C DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 19 O4 ? ? B DA 7 C DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 18 N1 ? ? B DC 8 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 18 O6 ? ? B DC 8 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 18 N2 ? ? B DC 8 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 17 N1 ? ? B DT 9 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 17 N6 ? ? B DT 9 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 16 N1 ? ? B DT 10 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 16 N6 ? ? B DT 10 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 13 N1 ? ? ? 1_555 C DT 15 N3 ? ? B DA 11 C DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DA 13 N6 ? ? ? 1_555 C DT 15 O4 ? ? B DA 11 C DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DT 14 N3 ? ? ? 1_555 C DA 14 N1 ? ? B DT 12 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DT 14 O4 ? ? ? 1_555 C DA 14 N6 ? ? B DT 12 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DT 15 N3 ? ? ? 1_555 C DA 13 N1 ? ? B DT 13 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DT 15 O4 ? ? ? 1_555 C DA 13 N6 ? ? B DT 13 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 12 N1 ? ? B DC 14 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 12 O6 ? ? B DC 14 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 12 N2 ? ? B DC 14 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DA 17 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 15 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DA 17 N6 ? ? ? 1_555 C DT 11 O4 ? ? B DA 15 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DG 18 N1 ? ? ? 1_555 C DC 10 N3 ? ? B DG 16 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DG 18 N2 ? ? ? 1_555 C DC 10 O2 ? ? B DG 16 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DG 18 O6 ? ? ? 1_555 C DC 10 N4 ? ? B DG 16 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DG 19 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG 17 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DG 19 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG 17 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DG 19 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG 17 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DC 20 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 18 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DC 20 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 18 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DC 20 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 18 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DT 21 N3 ? ? ? 1_555 C DA 7 N1 ? ? B DT 19 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DT 21 O4 ? ? ? 1_555 C DA 7 N6 ? ? B DT 19 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DT 22 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 20 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DT 22 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 20 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DT 23 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 21 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DT 23 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 21 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DT 24 N3 ? ? ? 1_555 C DA 4 N1 ? ? B DT 22 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DT 24 O4 ? ? ? 1_555 C DA 4 N6 ? ? B DT 22 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DA 25 N1 ? ? ? 1_555 C DT 3 N3 ? ? B DA 23 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DA 25 N6 ? ? ? 1_555 C DT 3 O4 ? ? B DA 23 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DG 26 N1 ? ? ? 1_555 C DC 2 N3 ? ? B DG 24 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B DG 26 N2 ? ? ? 1_555 C DC 2 O2 ? ? B DG 24 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B DG 26 O6 ? ? ? 1_555 C DC 2 N4 ? ? B DG 24 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ALA 20 ? A ALA 21 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 OE2 ? A GLU 177 ? A GLU 178 ? 1_555 97.9 ? 2 O ? A ALA 20 ? A ALA 21 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 O ? H HOH . ? A HOH 527 ? 1_555 83.7 ? 3 OE2 ? A GLU 177 ? A GLU 178 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 O ? H HOH . ? A HOH 527 ? 1_555 87.3 ? 4 O ? A ALA 20 ? A ALA 21 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 OP1 ? B DC 16 ? B DC 14 ? 1_555 176.6 ? 5 OE2 ? A GLU 177 ? A GLU 178 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 OP1 ? B DC 16 ? B DC 14 ? 1_555 79.9 ? 6 O ? H HOH . ? A HOH 527 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 OP1 ? B DC 16 ? B DC 14 ? 1_555 98.7 ? 7 O ? A ALA 20 ? A ALA 21 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 O ? I HOH . ? B HOH 116 ? 1_555 100.4 ? 8 OE2 ? A GLU 177 ? A GLU 178 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 O ? I HOH . ? B HOH 116 ? 1_555 158.9 ? 9 O ? H HOH . ? A HOH 527 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 O ? I HOH . ? B HOH 116 ? 1_555 84.1 ? 10 OP1 ? B DC 16 ? B DC 14 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 O ? I HOH . ? B HOH 116 ? 1_555 82.4 ? 11 O ? A ALA 20 ? A ALA 21 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 OP2 ? C DA 16 ? C DA 16 ? 1_555 82.4 ? 12 OE2 ? A GLU 177 ? A GLU 178 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 OP2 ? C DA 16 ? C DA 16 ? 1_555 99.5 ? 13 O ? H HOH . ? A HOH 527 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 OP2 ? C DA 16 ? C DA 16 ? 1_555 165.3 ? 14 OP1 ? B DC 16 ? B DC 14 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 OP2 ? C DA 16 ? C DA 16 ? 1_555 95.4 ? 15 O ? I HOH . ? B HOH 116 ? 1_555 CA ? E CA . ? A CA 402 ? 1_555 OP2 ? C DA 16 ? C DA 16 ? 1_555 93.4 ? 16 OE2 ? A GLU 21 ? A GLU 22 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? A GLY 176 ? A GLY 177 ? 1_555 86.9 ? 17 OE2 ? A GLU 21 ? A GLU 22 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 525 ? 1_555 92.7 ? 18 O ? A GLY 176 ? A GLY 177 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 525 ? 1_555 87.0 ? 19 OE2 ? A GLU 21 ? A GLU 22 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OP2 ? B DA 17 ? B DA 15 ? 1_555 96.3 ? 20 O ? A GLY 176 ? A GLY 177 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OP2 ? B DA 17 ? B DA 15 ? 1_555 80.3 ? 21 O ? H HOH . ? A HOH 525 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OP2 ? B DA 17 ? B DA 15 ? 1_555 163.9 ? 22 OE2 ? A GLU 21 ? A GLU 22 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OP1 ? C DT 15 ? C DT 15 ? 1_555 86.2 ? 23 O ? A GLY 176 ? A GLY 177 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OP1 ? C DT 15 ? C DT 15 ? 1_555 172.8 ? 24 O ? H HOH . ? A HOH 525 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OP1 ? C DT 15 ? C DT 15 ? 1_555 95.4 ? 25 OP2 ? B DA 17 ? B DA 15 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OP1 ? C DT 15 ? C DT 15 ? 1_555 98.5 ? 26 OE2 ? A GLU 21 ? A GLU 22 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? J HOH . ? C HOH 113 ? 1_555 161.7 ? 27 O ? A GLY 176 ? A GLY 177 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? J HOH . ? C HOH 113 ? 1_555 100.0 ? 28 O ? H HOH . ? A HOH 525 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? J HOH . ? C HOH 113 ? 1_555 71.0 ? 29 OP2 ? B DA 17 ? B DA 15 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? J HOH . ? C HOH 113 ? 1_555 101.5 ? 30 OP1 ? C DT 15 ? C DT 15 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? J HOH . ? C HOH 113 ? 1_555 87.2 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 22 ? ASN A 30 ? GLY A 23 ASN A 31 AA1 2 TYR A 38 ? HIS A 49 ? TYR A 39 HIS A 50 AA1 3 ALA A 75 ? VAL A 80 ? ALA A 76 VAL A 81 AA1 4 VAL A 67 ? ASN A 70 ? VAL A 68 ASN A 71 AA2 1 GLY A 178 ? ILE A 185 ? GLY A 179 ILE A 186 AA2 2 GLN A 194 ? HIS A 204 ? GLN A 195 HIS A 205 AA2 3 PHE A 231 ? VAL A 238 ? PHE A 232 VAL A 239 AA2 4 TYR A 222 ? LYS A 228 ? TYR A 223 LYS A 229 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 27 ? N ARG A 28 O GLU A 41 ? O GLU A 42 AA1 2 3 N PHE A 44 ? N PHE A 45 O VAL A 80 ? O VAL A 81 AA1 3 4 O SER A 77 ? O SER A 78 N ALA A 69 ? N ALA A 70 AA2 1 2 N ASN A 183 ? N ASN A 184 O GLN A 196 ? O GLN A 197 AA2 2 3 N GLN A 203 ? N GLN A 204 O LEU A 234 ? O LEU A 235 AA2 3 4 O TRP A 233 ? O TRP A 234 N SER A 226 ? N SER A 227 # _pdbx_entry_details.entry_id 9XYA _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 A GLU 22 ? ? O A HOH 501 ? ? 2.13 2 1 NZ A LYS 120 ? ? O A HOH 502 ? ? 2.18 3 1 OH A TYR 223 ? ? OP1 C DA 6 ? ? 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 DA _pdbx_validate_rmsd_bond.auth_seq_id_1 22 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 DA _pdbx_validate_rmsd_bond.auth_seq_id_2 22 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.375 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.044 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DA 23 ? ? "C4'" B DA 23 ? ? "C3'" B DA 23 ? ? 101.77 104.50 -2.73 0.40 N 2 1 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 110.94 108.30 2.64 0.30 N 3 1 "O4'" C DA 22 ? ? "C1'" C DA 22 ? ? N9 C DA 22 ? ? 111.28 108.30 2.98 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 139 ? ? 46.58 -121.50 2 1 ASN A 167 ? ? 177.75 175.30 3 1 LYS A 189 ? ? -71.63 30.82 4 1 LYS A 191 ? ? -50.27 -84.61 5 1 CYS A 221 ? ? 171.89 157.79 6 1 SER A 230 ? ? 57.25 -82.93 7 1 LYS A 279 ? ? 53.57 12.82 8 1 ASN A 298 ? ? 62.75 -122.65 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 2 ? A MET 1 2 1 Y 1 A ALA 3 ? A ALA 2 3 1 Y 1 A SER 4 ? A SER 3 4 1 Y 1 A SER 5 ? A SER 4 5 1 Y 1 A ARG 6 ? A ARG 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 EDO C1 C N N 232 EDO O1 O N N 233 EDO C2 C N N 234 EDO O2 O N N 235 EDO H11 H N N 236 EDO H12 H N N 237 EDO HO1 H N N 238 EDO H21 H N N 239 EDO H22 H N N 240 EDO HO2 H N N 241 GLN N N N N 242 GLN CA C N S 243 GLN C C N N 244 GLN O O N N 245 GLN CB C N N 246 GLN CG C N N 247 GLN CD C N N 248 GLN OE1 O N N 249 GLN NE2 N N N 250 GLN OXT O N N 251 GLN H H N N 252 GLN H2 H N N 253 GLN HA H N N 254 GLN HB2 H N N 255 GLN HB3 H N N 256 GLN HG2 H N N 257 GLN HG3 H N N 258 GLN HE21 H N N 259 GLN HE22 H N N 260 GLN HXT H N N 261 GLU N N N N 262 GLU CA C N S 263 GLU C C N N 264 GLU O O N N 265 GLU CB C N N 266 GLU CG C N N 267 GLU CD C N N 268 GLU OE1 O N N 269 GLU OE2 O N N 270 GLU OXT O N N 271 GLU H H N N 272 GLU H2 H N N 273 GLU HA H N N 274 GLU HB2 H N N 275 GLU HB3 H N N 276 GLU HG2 H N N 277 GLU HG3 H N N 278 GLU HE2 H N N 279 GLU HXT H N N 280 GLY N N N N 281 GLY CA C N N 282 GLY C C N N 283 GLY O O N N 284 GLY OXT O N N 285 GLY H H N N 286 GLY H2 H N N 287 GLY HA2 H N N 288 GLY HA3 H N N 289 GLY HXT H N N 290 GOL C1 C N N 291 GOL O1 O N N 292 GOL C2 C N N 293 GOL O2 O N N 294 GOL C3 C N N 295 GOL O3 O N N 296 GOL H11 H N N 297 GOL H12 H N N 298 GOL HO1 H N N 299 GOL H2 H N N 300 GOL HO2 H N N 301 GOL H31 H N N 302 GOL H32 H N N 303 GOL HO3 H N N 304 HIS N N N N 305 HIS CA C N S 306 HIS C C N N 307 HIS O O N N 308 HIS CB C N N 309 HIS CG C Y N 310 HIS ND1 N Y N 311 HIS CD2 C Y N 312 HIS CE1 C Y N 313 HIS NE2 N Y N 314 HIS OXT O N N 315 HIS H H N N 316 HIS H2 H N N 317 HIS HA H N N 318 HIS HB2 H N N 319 HIS HB3 H N N 320 HIS HD1 H N N 321 HIS HD2 H N N 322 HIS HE1 H N N 323 HIS HE2 H N N 324 HIS HXT H N N 325 HOH O O N N 326 HOH H1 H N N 327 HOH H2 H N N 328 ILE N N N N 329 ILE CA C N S 330 ILE C C N N 331 ILE O O N N 332 ILE CB C N S 333 ILE CG1 C N N 334 ILE CG2 C N N 335 ILE CD1 C N N 336 ILE OXT O N N 337 ILE H H N N 338 ILE H2 H N N 339 ILE HA H N N 340 ILE HB H N N 341 ILE HG12 H N N 342 ILE HG13 H N N 343 ILE HG21 H N N 344 ILE HG22 H N N 345 ILE HG23 H N N 346 ILE HD11 H N N 347 ILE HD12 H N N 348 ILE HD13 H N N 349 ILE HXT H N N 350 LEU N N N N 351 LEU CA C N S 352 LEU C C N N 353 LEU O O N N 354 LEU CB C N N 355 LEU CG C N N 356 LEU CD1 C N N 357 LEU CD2 C N N 358 LEU OXT O N N 359 LEU H H N N 360 LEU H2 H N N 361 LEU HA H N N 362 LEU HB2 H N N 363 LEU HB3 H N N 364 LEU HG H N N 365 LEU HD11 H N N 366 LEU HD12 H N N 367 LEU HD13 H N N 368 LEU HD21 H N N 369 LEU HD22 H N N 370 LEU HD23 H N N 371 LEU HXT H N N 372 LYS N N N N 373 LYS CA C N S 374 LYS C C N N 375 LYS O O N N 376 LYS CB C N N 377 LYS CG C N N 378 LYS CD C N N 379 LYS CE C N N 380 LYS NZ N N N 381 LYS OXT O N N 382 LYS H H N N 383 LYS H2 H N N 384 LYS HA H N N 385 LYS HB2 H N N 386 LYS HB3 H N N 387 LYS HG2 H N N 388 LYS HG3 H N N 389 LYS HD2 H N N 390 LYS HD3 H N N 391 LYS HE2 H N N 392 LYS HE3 H N N 393 LYS HZ1 H N N 394 LYS HZ2 H N N 395 LYS HZ3 H N N 396 LYS HXT H N N 397 MET N N N N 398 MET CA C N S 399 MET C C N N 400 MET O O N N 401 MET CB C N N 402 MET CG C N N 403 MET SD S N N 404 MET CE C N N 405 MET OXT O N N 406 MET H H N N 407 MET H2 H N N 408 MET HA H N N 409 MET HB2 H N N 410 MET HB3 H N N 411 MET HG2 H N N 412 MET HG3 H N N 413 MET HE1 H N N 414 MET HE2 H N N 415 MET HE3 H N N 416 MET HXT H N N 417 PHE N N N N 418 PHE CA C N S 419 PHE C C N N 420 PHE O O N N 421 PHE CB C N N 422 PHE CG C Y N 423 PHE CD1 C Y N 424 PHE CD2 C Y N 425 PHE CE1 C Y N 426 PHE CE2 C Y N 427 PHE CZ C Y N 428 PHE OXT O N N 429 PHE H H N N 430 PHE H2 H N N 431 PHE HA H N N 432 PHE HB2 H N N 433 PHE HB3 H N N 434 PHE HD1 H N N 435 PHE HD2 H N N 436 PHE HE1 H N N 437 PHE HE2 H N N 438 PHE HZ H N N 439 PHE HXT H N N 440 PRO N N N N 441 PRO CA C N S 442 PRO C C N N 443 PRO O O N N 444 PRO CB C N N 445 PRO CG C N N 446 PRO CD C N N 447 PRO OXT O N N 448 PRO H H N N 449 PRO HA H N N 450 PRO HB2 H N N 451 PRO HB3 H N N 452 PRO HG2 H N N 453 PRO HG3 H N N 454 PRO HD2 H N N 455 PRO HD3 H N N 456 PRO HXT H N N 457 SER N N N N 458 SER CA C N S 459 SER C C N N 460 SER O O N N 461 SER CB C N N 462 SER OG O N N 463 SER OXT O N N 464 SER H H N N 465 SER H2 H N N 466 SER HA H N N 467 SER HB2 H N N 468 SER HB3 H N N 469 SER HG H N N 470 SER HXT H N N 471 THR N N N N 472 THR CA C N S 473 THR C C N N 474 THR O O N N 475 THR CB C N R 476 THR OG1 O N N 477 THR CG2 C N N 478 THR OXT O N N 479 THR H H N N 480 THR H2 H N N 481 THR HA H N N 482 THR HB H N N 483 THR HG1 H N N 484 THR HG21 H N N 485 THR HG22 H N N 486 THR HG23 H N N 487 THR HXT H N N 488 TRP N N N N 489 TRP CA C N S 490 TRP C C N N 491 TRP O O N N 492 TRP CB C N N 493 TRP CG C Y N 494 TRP CD1 C Y N 495 TRP CD2 C Y N 496 TRP NE1 N Y N 497 TRP CE2 C Y N 498 TRP CE3 C Y N 499 TRP CZ2 C Y N 500 TRP CZ3 C Y N 501 TRP CH2 C Y N 502 TRP OXT O N N 503 TRP H H N N 504 TRP H2 H N N 505 TRP HA H N N 506 TRP HB2 H N N 507 TRP HB3 H N N 508 TRP HD1 H N N 509 TRP HE1 H N N 510 TRP HE3 H N N 511 TRP HZ2 H N N 512 TRP HZ3 H N N 513 TRP HH2 H N N 514 TRP HXT H N N 515 TYR N N N N 516 TYR CA C N S 517 TYR C C N N 518 TYR O O N N 519 TYR CB C N N 520 TYR CG C Y N 521 TYR CD1 C Y N 522 TYR CD2 C Y N 523 TYR CE1 C Y N 524 TYR CE2 C Y N 525 TYR CZ C Y N 526 TYR OH O N N 527 TYR OXT O N N 528 TYR H H N N 529 TYR H2 H N N 530 TYR HA H N N 531 TYR HB2 H N N 532 TYR HB3 H N N 533 TYR HD1 H N N 534 TYR HD2 H N N 535 TYR HE1 H N N 536 TYR HE2 H N N 537 TYR HH H N N 538 TYR HXT H N N 539 VAL N N N N 540 VAL CA C N S 541 VAL C C N N 542 VAL O O N N 543 VAL CB C N N 544 VAL CG1 C N N 545 VAL CG2 C N N 546 VAL OXT O N N 547 VAL H H N N 548 VAL H2 H N N 549 VAL HA H N N 550 VAL HB H N N 551 VAL HG11 H N N 552 VAL HG12 H N N 553 VAL HG13 H N N 554 VAL HG21 H N N 555 VAL HG22 H N N 556 VAL HG23 H N N 557 VAL HXT H N N 558 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EDO C1 O1 sing N N 232 EDO C1 C2 sing N N 233 EDO C1 H11 sing N N 234 EDO C1 H12 sing N N 235 EDO O1 HO1 sing N N 236 EDO C2 O2 sing N N 237 EDO C2 H21 sing N N 238 EDO C2 H22 sing N N 239 EDO O2 HO2 sing N N 240 GLN N CA sing N N 241 GLN N H sing N N 242 GLN N H2 sing N N 243 GLN CA C sing N N 244 GLN CA CB sing N N 245 GLN CA HA sing N N 246 GLN C O doub N N 247 GLN C OXT sing N N 248 GLN CB CG sing N N 249 GLN CB HB2 sing N N 250 GLN CB HB3 sing N N 251 GLN CG CD sing N N 252 GLN CG HG2 sing N N 253 GLN CG HG3 sing N N 254 GLN CD OE1 doub N N 255 GLN CD NE2 sing N N 256 GLN NE2 HE21 sing N N 257 GLN NE2 HE22 sing N N 258 GLN OXT HXT sing N N 259 GLU N CA sing N N 260 GLU N H sing N N 261 GLU N H2 sing N N 262 GLU CA C sing N N 263 GLU CA CB sing N N 264 GLU CA HA sing N N 265 GLU C O doub N N 266 GLU C OXT sing N N 267 GLU CB CG sing N N 268 GLU CB HB2 sing N N 269 GLU CB HB3 sing N N 270 GLU CG CD sing N N 271 GLU CG HG2 sing N N 272 GLU CG HG3 sing N N 273 GLU CD OE1 doub N N 274 GLU CD OE2 sing N N 275 GLU OE2 HE2 sing N N 276 GLU OXT HXT sing N N 277 GLY N CA sing N N 278 GLY N H sing N N 279 GLY N H2 sing N N 280 GLY CA C sing N N 281 GLY CA HA2 sing N N 282 GLY CA HA3 sing N N 283 GLY C O doub N N 284 GLY C OXT sing N N 285 GLY OXT HXT sing N N 286 GOL C1 O1 sing N N 287 GOL C1 C2 sing N N 288 GOL C1 H11 sing N N 289 GOL C1 H12 sing N N 290 GOL O1 HO1 sing N N 291 GOL C2 O2 sing N N 292 GOL C2 C3 sing N N 293 GOL C2 H2 sing N N 294 GOL O2 HO2 sing N N 295 GOL C3 O3 sing N N 296 GOL C3 H31 sing N N 297 GOL C3 H32 sing N N 298 GOL O3 HO3 sing N N 299 HIS N CA sing N N 300 HIS N H sing N N 301 HIS N H2 sing N N 302 HIS CA C sing N N 303 HIS CA CB sing N N 304 HIS CA HA sing N N 305 HIS C O doub N N 306 HIS C OXT sing N N 307 HIS CB CG sing N N 308 HIS CB HB2 sing N N 309 HIS CB HB3 sing N N 310 HIS CG ND1 sing Y N 311 HIS CG CD2 doub Y N 312 HIS ND1 CE1 doub Y N 313 HIS ND1 HD1 sing N N 314 HIS CD2 NE2 sing Y N 315 HIS CD2 HD2 sing N N 316 HIS CE1 NE2 sing Y N 317 HIS CE1 HE1 sing N N 318 HIS NE2 HE2 sing N N 319 HIS OXT HXT sing N N 320 HOH O H1 sing N N 321 HOH O H2 sing N N 322 ILE N CA sing N N 323 ILE N H sing N N 324 ILE N H2 sing N N 325 ILE CA C sing N N 326 ILE CA CB sing N N 327 ILE CA HA sing N N 328 ILE C O doub N N 329 ILE C OXT sing N N 330 ILE CB CG1 sing N N 331 ILE CB CG2 sing N N 332 ILE CB HB sing N N 333 ILE CG1 CD1 sing N N 334 ILE CG1 HG12 sing N N 335 ILE CG1 HG13 sing N N 336 ILE CG2 HG21 sing N N 337 ILE CG2 HG22 sing N N 338 ILE CG2 HG23 sing N N 339 ILE CD1 HD11 sing N N 340 ILE CD1 HD12 sing N N 341 ILE CD1 HD13 sing N N 342 ILE OXT HXT sing N N 343 LEU N CA sing N N 344 LEU N H sing N N 345 LEU N H2 sing N N 346 LEU CA C sing N N 347 LEU CA CB sing N N 348 LEU CA HA sing N N 349 LEU C O doub N N 350 LEU C OXT sing N N 351 LEU CB CG sing N N 352 LEU CB HB2 sing N N 353 LEU CB HB3 sing N N 354 LEU CG CD1 sing N N 355 LEU CG CD2 sing N N 356 LEU CG HG sing N N 357 LEU CD1 HD11 sing N N 358 LEU CD1 HD12 sing N N 359 LEU CD1 HD13 sing N N 360 LEU CD2 HD21 sing N N 361 LEU CD2 HD22 sing N N 362 LEU CD2 HD23 sing N N 363 LEU OXT HXT sing N N 364 LYS N CA sing N N 365 LYS N H sing N N 366 LYS N H2 sing N N 367 LYS CA C sing N N 368 LYS CA CB sing N N 369 LYS CA HA sing N N 370 LYS C O doub N N 371 LYS C OXT sing N N 372 LYS CB CG sing N N 373 LYS CB HB2 sing N N 374 LYS CB HB3 sing N N 375 LYS CG CD sing N N 376 LYS CG HG2 sing N N 377 LYS CG HG3 sing N N 378 LYS CD CE sing N N 379 LYS CD HD2 sing N N 380 LYS CD HD3 sing N N 381 LYS CE NZ sing N N 382 LYS CE HE2 sing N N 383 LYS CE HE3 sing N N 384 LYS NZ HZ1 sing N N 385 LYS NZ HZ2 sing N N 386 LYS NZ HZ3 sing N N 387 LYS OXT HXT sing N N 388 MET N CA sing N N 389 MET N H sing N N 390 MET N H2 sing N N 391 MET CA C sing N N 392 MET CA CB sing N N 393 MET CA HA sing N N 394 MET C O doub N N 395 MET C OXT sing N N 396 MET CB CG sing N N 397 MET CB HB2 sing N N 398 MET CB HB3 sing N N 399 MET CG SD sing N N 400 MET CG HG2 sing N N 401 MET CG HG3 sing N N 402 MET SD CE sing N N 403 MET CE HE1 sing N N 404 MET CE HE2 sing N N 405 MET CE HE3 sing N N 406 MET OXT HXT sing N N 407 PHE N CA sing N N 408 PHE N H sing N N 409 PHE N H2 sing N N 410 PHE CA C sing N N 411 PHE CA CB sing N N 412 PHE CA HA sing N N 413 PHE C O doub N N 414 PHE C OXT sing N N 415 PHE CB CG sing N N 416 PHE CB HB2 sing N N 417 PHE CB HB3 sing N N 418 PHE CG CD1 doub Y N 419 PHE CG CD2 sing Y N 420 PHE CD1 CE1 sing Y N 421 PHE CD1 HD1 sing N N 422 PHE CD2 CE2 doub Y N 423 PHE CD2 HD2 sing N N 424 PHE CE1 CZ doub Y N 425 PHE CE1 HE1 sing N N 426 PHE CE2 CZ sing Y N 427 PHE CE2 HE2 sing N N 428 PHE CZ HZ sing N N 429 PHE OXT HXT sing N N 430 PRO N CA sing N N 431 PRO N CD sing N N 432 PRO N H sing N N 433 PRO CA C sing N N 434 PRO CA CB sing N N 435 PRO CA HA sing N N 436 PRO C O doub N N 437 PRO C OXT sing N N 438 PRO CB CG sing N N 439 PRO CB HB2 sing N N 440 PRO CB HB3 sing N N 441 PRO CG CD sing N N 442 PRO CG HG2 sing N N 443 PRO CG HG3 sing N N 444 PRO CD HD2 sing N N 445 PRO CD HD3 sing N N 446 PRO OXT HXT sing N N 447 SER N CA sing N N 448 SER N H sing N N 449 SER N H2 sing N N 450 SER CA C sing N N 451 SER CA CB sing N N 452 SER CA HA sing N N 453 SER C O doub N N 454 SER C OXT sing N N 455 SER CB OG sing N N 456 SER CB HB2 sing N N 457 SER CB HB3 sing N N 458 SER OG HG sing N N 459 SER OXT HXT sing N N 460 THR N CA sing N N 461 THR N H sing N N 462 THR N H2 sing N N 463 THR CA C sing N N 464 THR CA CB sing N N 465 THR CA HA sing N N 466 THR C O doub N N 467 THR C OXT sing N N 468 THR CB OG1 sing N N 469 THR CB CG2 sing N N 470 THR CB HB sing N N 471 THR OG1 HG1 sing N N 472 THR CG2 HG21 sing N N 473 THR CG2 HG22 sing N N 474 THR CG2 HG23 sing N N 475 THR OXT HXT sing N N 476 TRP N CA sing N N 477 TRP N H sing N N 478 TRP N H2 sing N N 479 TRP CA C sing N N 480 TRP CA CB sing N N 481 TRP CA HA sing N N 482 TRP C O doub N N 483 TRP C OXT sing N N 484 TRP CB CG sing N N 485 TRP CB HB2 sing N N 486 TRP CB HB3 sing N N 487 TRP CG CD1 doub Y N 488 TRP CG CD2 sing Y N 489 TRP CD1 NE1 sing Y N 490 TRP CD1 HD1 sing N N 491 TRP CD2 CE2 doub Y N 492 TRP CD2 CE3 sing Y N 493 TRP NE1 CE2 sing Y N 494 TRP NE1 HE1 sing N N 495 TRP CE2 CZ2 sing Y N 496 TRP CE3 CZ3 doub Y N 497 TRP CE3 HE3 sing N N 498 TRP CZ2 CH2 doub Y N 499 TRP CZ2 HZ2 sing N N 500 TRP CZ3 CH2 sing Y N 501 TRP CZ3 HZ3 sing N N 502 TRP CH2 HH2 sing N N 503 TRP OXT HXT sing N N 504 TYR N CA sing N N 505 TYR N H sing N N 506 TYR N H2 sing N N 507 TYR CA C sing N N 508 TYR CA CB sing N N 509 TYR CA HA sing N N 510 TYR C O doub N N 511 TYR C OXT sing N N 512 TYR CB CG sing N N 513 TYR CB HB2 sing N N 514 TYR CB HB3 sing N N 515 TYR CG CD1 doub Y N 516 TYR CG CD2 sing Y N 517 TYR CD1 CE1 sing Y N 518 TYR CD1 HD1 sing N N 519 TYR CD2 CE2 doub Y N 520 TYR CD2 HD2 sing N N 521 TYR CE1 CZ doub Y N 522 TYR CE1 HE1 sing N N 523 TYR CE2 CZ sing Y N 524 TYR CE2 HE2 sing N N 525 TYR CZ OH sing N N 526 TYR OH HH sing N N 527 TYR OXT HXT sing N N 528 VAL N CA sing N N 529 VAL N H sing N N 530 VAL N H2 sing N N 531 VAL CA C sing N N 532 VAL CA CB sing N N 533 VAL CA HA sing N N 534 VAL C O doub N N 535 VAL C OXT sing N N 536 VAL CB CG1 sing N N 537 VAL CB CG2 sing N N 538 VAL CB HB sing N N 539 VAL CG1 HG11 sing N N 540 VAL CG1 HG12 sing N N 541 VAL CG1 HG13 sing N N 542 VAL CG2 HG21 sing N N 543 VAL CG2 HG22 sing N N 544 VAL CG2 HG23 sing N N 545 VAL OXT HXT sing N N 546 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9XYA 'double helix' 9XYA 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 26 1_555 -0.264 -0.106 0.055 -3.429 -16.383 2.507 1 B_DG0:DC26_C B 0 ? C 26 ? 19 1 1 B DG 3 1_555 C DC 25 1_555 -0.208 -0.151 0.185 -0.696 -20.430 1.797 2 B_DG1:DC25_C B 1 ? C 25 ? 19 1 1 B DT 4 1_555 C DA 24 1_555 -0.037 -0.146 0.245 -4.269 -15.211 6.404 3 B_DT2:DA24_C B 2 ? C 24 ? 20 1 1 B DT 5 1_555 C DA 23 1_555 -0.188 -0.041 0.138 -9.100 -17.148 1.909 4 B_DT3:DA23_C B 3 ? C 23 ? 20 1 1 B DT 6 1_555 C DA 22 1_555 -0.223 -0.058 -0.105 -10.211 -6.163 2.768 5 B_DT4:DA22_C B 4 ? C 22 ? 20 1 1 B DC 7 1_555 C DG 21 1_555 0.199 -0.171 -0.064 -3.135 -4.395 0.819 6 B_DC5:DG21_C B 5 ? C 21 ? 19 1 1 B DC 8 1_555 C DG 20 1_555 0.346 -0.152 -0.106 3.883 2.766 1.534 7 B_DC6:DG20_C B 6 ? C 20 ? 19 1 1 B DA 9 1_555 C DT 19 1_555 -0.049 -0.125 0.288 9.113 1.735 3.381 8 B_DA7:DT19_C B 7 ? C 19 ? 20 1 1 B DC 10 1_555 C DG 18 1_555 0.246 -0.129 0.067 6.426 -3.616 4.524 9 B_DC8:DG18_C B 8 ? C 18 ? 19 1 1 B DT 11 1_555 C DA 17 1_555 -0.143 -0.039 -0.258 -2.091 -9.269 -1.037 10 B_DT9:DA17_C B 9 ? C 17 ? 20 1 1 B DT 12 1_555 C DA 16 1_555 0.063 -0.076 -0.283 1.928 -7.958 -0.505 11 B_DT10:DA16_C B 10 ? C 16 ? 20 1 1 B DA 13 1_555 C DT 15 1_555 0.531 0.217 0.297 2.321 -18.016 9.186 12 B_DA11:DT15_C B 11 ? C 15 ? 20 1 1 B DT 14 1_555 C DA 14 1_555 -0.060 -0.212 0.281 -1.740 -14.361 1.040 13 B_DT12:DA14_C B 12 ? C 14 ? 20 1 1 B DT 15 1_555 C DA 13 1_555 0.115 -0.170 -0.027 -3.444 -22.215 7.752 14 B_DT13:DA13_C B 13 ? C 13 ? 20 1 1 B DC 16 1_555 C DG 12 1_555 0.159 -0.130 0.149 -10.532 -24.097 2.092 15 B_DC14:DG12_C B 14 ? C 12 ? 19 1 1 B DA 17 1_555 C DT 11 1_555 -0.028 -0.194 0.377 -0.356 -4.005 -2.785 16 B_DA15:DT11_C B 15 ? C 11 ? 20 1 1 B DG 18 1_555 C DC 10 1_555 -0.195 -0.035 -0.005 -1.837 -5.001 2.777 17 B_DG16:DC10_C B 16 ? C 10 ? 19 1 1 B DG 19 1_555 C DC 9 1_555 -0.181 -0.155 -0.125 -0.322 -9.620 1.733 18 B_DG17:DC9_C B 17 ? C 9 ? 19 1 1 B DC 20 1_555 C DG 8 1_555 0.375 -0.211 -0.288 -1.783 -12.282 7.066 19 B_DC18:DG8_C B 18 ? C 8 ? 19 1 1 B DT 21 1_555 C DA 7 1_555 0.022 -0.049 -0.037 1.442 -12.490 2.141 20 B_DT19:DA7_C B 19 ? C 7 ? 20 1 1 B DT 22 1_555 C DA 6 1_555 -0.054 -0.095 0.123 -0.710 -14.340 -0.749 21 B_DT20:DA6_C B 20 ? C 6 ? 20 1 1 B DT 23 1_555 C DA 5 1_555 -0.208 -0.014 0.050 -3.408 -8.431 3.760 22 B_DT21:DA5_C B 21 ? C 5 ? 20 1 1 B DT 24 1_555 C DA 4 1_555 -0.083 -0.178 0.084 -3.149 -10.800 4.204 23 B_DT22:DA4_C B 22 ? C 4 ? 20 1 1 B DA 25 1_555 C DT 3 1_555 0.045 -0.250 0.201 -3.689 -2.075 2.866 24 B_DA23:DT3_C B 23 ? C 3 ? 20 1 1 B DG 26 1_555 C DC 2 1_555 -0.221 -0.119 -0.037 4.085 -0.320 1.995 25 B_DG24:DC2_C B 24 ? C 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 26 1_555 B DG 3 1_555 C DC 25 1_555 -0.051 1.068 3.318 -6.367 0.041 36.793 1.664 -0.776 3.282 0.064 9.996 37.321 1 BB_DG0DG1:DC25DC26_CC B 0 ? C 26 ? B 1 ? C 25 ? 1 B DG 3 1_555 C DC 25 1_555 B DT 4 1_555 C DA 24 1_555 0.265 -0.281 3.398 0.415 -3.125 33.472 0.048 -0.388 3.412 -5.412 -0.718 33.616 2 BB_DG1DT2:DA24DC25_CC B 1 ? C 25 ? B 2 ? C 24 ? 1 B DT 4 1_555 C DA 24 1_555 B DT 5 1_555 C DA 23 1_555 -0.407 -0.354 3.218 -0.157 -0.361 36.990 -0.510 0.621 3.223 -0.569 0.247 36.992 3 BB_DT2DT3:DA23DA24_CC B 2 ? C 24 ? B 3 ? C 23 ? 1 B DT 5 1_555 C DA 23 1_555 B DT 6 1_555 C DA 22 1_555 0.595 0.196 3.345 3.633 -2.549 39.336 0.597 -0.441 3.366 -3.772 -5.376 39.576 4 BB_DT3DT4:DA22DA23_CC B 3 ? C 23 ? B 4 ? C 22 ? 1 B DT 6 1_555 C DA 22 1_555 B DC 7 1_555 C DG 21 1_555 -0.405 -0.281 3.221 -4.775 -1.156 29.057 -0.307 -0.220 3.252 -2.283 9.431 29.461 5 BB_DT4DC5:DG21DA22_CC B 4 ? C 22 ? B 5 ? C 21 ? 1 B DC 7 1_555 C DG 21 1_555 B DC 8 1_555 C DG 20 1_555 -0.462 -0.624 3.117 -0.583 4.342 32.134 -1.836 0.730 3.017 7.798 1.047 32.424 6 BB_DC5DC6:DG20DG21_CC B 5 ? C 21 ? B 6 ? C 20 ? 1 B DC 8 1_555 C DG 20 1_555 B DA 9 1_555 C DT 19 1_555 0.229 -0.236 3.169 -4.407 0.698 36.462 -0.466 -0.944 3.116 1.111 7.010 36.725 7 BB_DC6DA7:DT19DG20_CC B 6 ? C 20 ? B 7 ? C 19 ? 1 B DA 9 1_555 C DT 19 1_555 B DC 10 1_555 C DG 18 1_555 0.619 -1.472 3.510 -1.220 1.722 29.659 -3.250 -1.477 3.393 3.359 2.380 29.732 8 BB_DA7DC8:DG18DT19_CC B 7 ? C 19 ? B 8 ? C 18 ? 1 B DC 10 1_555 C DG 18 1_555 B DT 11 1_555 C DA 17 1_555 -1.163 -1.298 3.618 2.458 -5.085 28.358 -1.329 2.945 3.678 -10.251 -4.955 28.903 9 BB_DC8DT9:DA17DG18_CC B 8 ? C 18 ? B 9 ? C 17 ? 1 B DT 11 1_555 C DA 17 1_555 B DT 12 1_555 C DA 16 1_555 -0.673 -0.681 3.106 -1.909 2.810 31.533 -1.737 0.899 3.069 5.152 3.501 31.711 10 BB_DT9DT10:DA16DA17_CC B 9 ? C 17 ? B 10 ? C 16 ? 1 B DT 12 1_555 C DA 16 1_555 B DA 13 1_555 C DT 15 1_555 0.319 0.725 3.285 -5.015 3.567 41.862 0.637 -0.960 3.275 4.960 6.974 42.292 11 BB_DT10DA11:DT15DA16_CC B 10 ? C 16 ? B 11 ? C 15 ? 1 B DA 13 1_555 C DT 15 1_555 B DT 14 1_555 C DA 14 1_555 -0.709 -0.366 3.284 1.168 -1.817 29.196 -0.330 1.655 3.270 -3.599 -2.313 29.274 12 BB_DA11DT12:DA14DT15_CC B 11 ? C 15 ? B 12 ? C 14 ? 1 B DT 14 1_555 C DA 14 1_555 B DT 15 1_555 C DA 13 1_555 0.228 2.660 3.400 3.434 -18.827 54.581 3.699 -0.065 2.446 -19.859 -3.622 57.594 13 BB_DT12DT13:DA13DA14_CC B 12 ? C 14 ? B 13 ? C 13 ? 1 B DT 15 1_555 C DA 13 1_555 B DC 16 1_555 C DG 12 1_555 -0.235 0.375 3.348 -4.593 -2.902 31.920 1.196 -0.408 3.302 -5.230 8.277 32.367 14 BB_DT13DC14:DG12DA13_CC B 13 ? C 13 ? B 14 ? C 12 ? 1 B DC 16 1_555 C DG 12 1_555 B DA 17 1_555 C DT 11 1_555 0.097 1.059 3.448 2.438 -7.019 38.603 2.433 0.155 3.214 -10.499 -3.646 39.285 15 BB_DC14DA15:DT11DG12_CC B 14 ? C 12 ? B 15 ? C 11 ? 1 B DA 17 1_555 C DT 11 1_555 B DG 18 1_555 C DC 10 1_555 0.868 -0.852 3.386 2.780 2.820 29.113 -2.307 -1.093 3.357 5.576 -5.498 29.376 16 BB_DA15DG16:DC10DT11_CC B 15 ? C 11 ? B 16 ? C 10 ? 1 B DG 18 1_555 C DC 10 1_555 B DG 19 1_555 C DC 9 1_555 0.513 -0.880 3.423 0.324 4.954 29.408 -2.769 -0.928 3.240 9.672 -0.633 29.815 17 BB_DG16DG17:DC9DC10_CC B 16 ? C 10 ? B 17 ? C 9 ? 1 B DG 19 1_555 C DC 9 1_555 B DC 20 1_555 C DG 8 1_555 -0.512 -0.716 3.371 2.163 3.502 32.001 -1.919 1.310 3.236 6.320 -3.903 32.258 18 BB_DG17DC18:DG8DC9_CC B 17 ? C 9 ? B 18 ? C 8 ? 1 B DC 20 1_555 C DG 8 1_555 B DT 21 1_555 C DA 7 1_555 -0.433 -0.766 3.396 0.563 5.423 27.107 -2.940 1.045 3.176 11.423 -1.185 27.640 19 BB_DC18DT19:DA7DG8_CC B 18 ? C 8 ? B 19 ? C 7 ? 1 B DT 21 1_555 C DA 7 1_555 B DT 22 1_555 C DA 6 1_555 0.146 -0.444 3.289 -0.834 -3.104 36.627 -0.277 -0.347 3.310 -4.927 1.323 36.763 20 BB_DT19DT20:DA6DA7_CC B 19 ? C 7 ? B 20 ? C 6 ? 1 B DT 22 1_555 C DA 6 1_555 B DT 23 1_555 C DA 5 1_555 0.024 -0.714 3.442 0.422 -6.426 32.664 -0.095 0.033 3.515 -11.289 -0.742 33.276 21 BB_DT20DT21:DA5DA6_CC B 20 ? C 6 ? B 21 ? C 5 ? 1 B DT 23 1_555 C DA 5 1_555 B DT 24 1_555 C DA 4 1_555 0.123 -0.596 3.325 -1.665 -3.695 36.086 -0.427 -0.435 3.358 -5.942 2.677 36.306 22 BB_DT21DT22:DA4DA5_CC B 21 ? C 5 ? B 22 ? C 4 ? 1 B DT 24 1_555 C DA 4 1_555 B DA 25 1_555 C DT 3 1_555 -0.082 -0.334 3.208 -2.096 -2.679 42.097 -0.193 -0.098 3.223 -3.723 2.912 42.228 23 BB_DT22DA23:DT3DA4_CC B 22 ? C 4 ? B 23 ? C 3 ? 1 B DA 25 1_555 C DT 3 1_555 B DG 26 1_555 C DC 2 1_555 -0.084 0.130 3.202 0.650 -0.918 27.345 0.498 0.335 3.193 -1.940 -1.373 27.368 24 BB_DA23DG24:DC2DT3_CC B 23 ? C 3 ? B 24 ? C 2 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'R01 GM139752' 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'R01 GM105691' 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'R35 GM148166' 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6UVW _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9XYA _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.025280 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013186 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005995 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CA H N O P S # loop_ #