HEADER OXIDOREDUCTASE 28-AUG-25 9Y0O TITLE CRYSTAL STRUCTURE OF ESCHERICHIA COLI DSBA G149T MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN DSBA; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.8.4.15; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: MATURE FORM OF THE PROTEIN WITHOUT THE SIGNAL SEQUENCE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 GENE: DSBA, DSF, PPFA, B3860, JW3832; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C43; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET KEYWDS THIOL OXIDASE MUTANT, BACTERIAL FOLDASE, THIOREDOXIN FOLD, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.R.CUNLIFFE,B.HERAS,J.J.PAXMAN REVDAT 1 25-MAR-26 9Y0O 0 JRNL AUTH T.R.CUNLIFFE,G.WANG,S.PENNING,P.SUBEDI,M.TOTSIKA,J.J.PAXMAN, JRNL AUTH 2 B.HERAS JRNL TITL THE CIS-PROLINE LOCK, A CONSERVED SCAFFOLD FOR CATALYSIS IN JRNL TITL 2 THIOREDOXIN-FOLD OXIDOREDUCTASES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 42845 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2160 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9800 - 4.4200 1.00 2917 152 0.1831 0.2057 REMARK 3 2 4.4200 - 3.5100 1.00 2826 108 0.1711 0.1989 REMARK 3 3 3.5100 - 3.0600 1.00 2788 120 0.1941 0.2132 REMARK 3 4 3.0600 - 2.7800 1.00 2728 149 0.2044 0.2257 REMARK 3 5 2.7800 - 2.5800 1.00 2702 184 0.2004 0.2209 REMARK 3 6 2.5800 - 2.4300 1.00 2665 187 0.2070 0.2440 REMARK 3 7 2.4300 - 2.3100 1.00 2749 131 0.2031 0.2366 REMARK 3 8 2.3100 - 2.2100 1.00 2701 131 0.2080 0.2433 REMARK 3 9 2.2100 - 2.1200 1.00 2702 160 0.2039 0.2467 REMARK 3 10 2.1200 - 2.0500 1.00 2708 132 0.2139 0.2412 REMARK 3 11 2.0500 - 1.9900 1.00 2697 127 0.2280 0.2852 REMARK 3 12 1.9900 - 1.9300 1.00 2695 151 0.2405 0.2657 REMARK 3 13 1.9300 - 1.8800 1.00 2649 166 0.2638 0.2715 REMARK 3 14 1.8800 - 1.8300 1.00 2716 147 0.2700 0.2974 REMARK 3 15 1.8300 - 1.7900 0.91 2442 115 0.3043 0.3729 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3087 REMARK 3 ANGLE : 1.027 4150 REMARK 3 CHIRALITY : 0.047 446 REMARK 3 PLANARITY : 0.006 530 REMARK 3 DIHEDRAL : 18.320 1132 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8950 -5.3427 -29.5363 REMARK 3 T TENSOR REMARK 3 T11: 0.2020 T22: 0.2561 REMARK 3 T33: 0.2725 T12: -0.0035 REMARK 3 T13: -0.0185 T23: -0.0617 REMARK 3 L TENSOR REMARK 3 L11: 2.9945 L22: 3.2924 REMARK 3 L33: 2.7012 L12: 0.9289 REMARK 3 L13: -1.6554 L23: -0.2978 REMARK 3 S TENSOR REMARK 3 S11: 0.2196 S12: -0.1744 S13: 0.4187 REMARK 3 S21: 0.1508 S22: -0.1986 S23: 0.2562 REMARK 3 S31: -0.2565 S32: -0.0376 S33: 0.0017 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4895 -4.4875 -29.5467 REMARK 3 T TENSOR REMARK 3 T11: 0.2140 T22: 0.3448 REMARK 3 T33: 0.4493 T12: -0.0112 REMARK 3 T13: 0.0003 T23: -0.0719 REMARK 3 L TENSOR REMARK 3 L11: 1.4758 L22: 4.5977 REMARK 3 L33: 2.7259 L12: 2.3212 REMARK 3 L13: -1.3791 L23: -0.7760 REMARK 3 S TENSOR REMARK 3 S11: -0.0342 S12: -0.2168 S13: 0.3028 REMARK 3 S21: -0.0137 S22: 0.0547 S23: 0.6710 REMARK 3 S31: -0.1717 S32: -0.3427 S33: -0.1464 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6518 -17.6884 -20.6948 REMARK 3 T TENSOR REMARK 3 T11: 0.1845 T22: 0.1804 REMARK 3 T33: 0.1832 T12: 0.0244 REMARK 3 T13: 0.0047 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 6.6120 L22: 5.9618 REMARK 3 L33: 7.4190 L12: 2.9035 REMARK 3 L13: -0.7062 L23: 2.2121 REMARK 3 S TENSOR REMARK 3 S11: 0.0898 S12: -0.5439 S13: 0.1159 REMARK 3 S21: 0.3794 S22: -0.0323 S23: 0.1131 REMARK 3 S31: -0.1359 S32: 0.0721 S33: -0.0264 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6822 -14.4399 -33.0878 REMARK 3 T TENSOR REMARK 3 T11: 0.2018 T22: 0.1886 REMARK 3 T33: 0.1791 T12: 0.0285 REMARK 3 T13: -0.0156 T23: -0.0277 REMARK 3 L TENSOR REMARK 3 L11: 2.9029 L22: 2.4793 REMARK 3 L33: 1.2785 L12: 1.6586 REMARK 3 L13: -0.1918 L23: 0.4836 REMARK 3 S TENSOR REMARK 3 S11: -0.0278 S12: -0.0761 S13: 0.0393 REMARK 3 S21: -0.0264 S22: 0.0169 S23: -0.0847 REMARK 3 S31: -0.0269 S32: 0.0697 S33: -0.0169 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4575 5.1366 -29.1743 REMARK 3 T TENSOR REMARK 3 T11: 0.2257 T22: 0.1990 REMARK 3 T33: 0.2752 T12: -0.0222 REMARK 3 T13: 0.0333 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 3.9910 L22: 7.7499 REMARK 3 L33: 2.1424 L12: 0.3480 REMARK 3 L13: 1.9697 L23: 5.1427 REMARK 3 S TENSOR REMARK 3 S11: -0.1928 S12: 0.0954 S13: 0.0835 REMARK 3 S21: 0.0496 S22: 0.0466 S23: 0.6224 REMARK 3 S31: -0.2853 S32: 0.0848 S33: 0.1367 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.6290 -1.1726 -32.2172 REMARK 3 T TENSOR REMARK 3 T11: 0.3069 T22: 0.2928 REMARK 3 T33: 0.3118 T12: 0.0128 REMARK 3 T13: -0.0394 T23: -0.0664 REMARK 3 L TENSOR REMARK 3 L11: 3.6095 L22: 2.6381 REMARK 3 L33: 2.1838 L12: 0.1622 REMARK 3 L13: -0.7821 L23: -0.2073 REMARK 3 S TENSOR REMARK 3 S11: 0.0782 S12: -0.4151 S13: 0.4180 REMARK 3 S21: 0.2993 S22: -0.0107 S23: -0.2728 REMARK 3 S31: -0.2942 S32: 0.2576 S33: -0.0527 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 50 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.3027 -5.4490 -36.6955 REMARK 3 T TENSOR REMARK 3 T11: 0.2092 T22: 0.2947 REMARK 3 T33: 0.3512 T12: 0.0230 REMARK 3 T13: -0.0324 T23: -0.0707 REMARK 3 L TENSOR REMARK 3 L11: 2.8305 L22: 3.7237 REMARK 3 L33: 7.6431 L12: 0.6121 REMARK 3 L13: -3.2587 L23: 2.6476 REMARK 3 S TENSOR REMARK 3 S11: -0.1976 S12: -0.1896 S13: 0.2438 REMARK 3 S21: 0.1715 S22: 0.2554 S23: -0.2025 REMARK 3 S31: -0.2650 S32: 0.0477 S33: 0.2918 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8652 -0.2895 -47.7318 REMARK 3 T TENSOR REMARK 3 T11: 0.3301 T22: 0.2644 REMARK 3 T33: 0.5015 T12: -0.0718 REMARK 3 T13: 0.0707 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 5.1652 L22: 7.5876 REMARK 3 L33: 4.4066 L12: 0.7325 REMARK 3 L13: -0.9019 L23: 0.7913 REMARK 3 S TENSOR REMARK 3 S11: -0.1182 S12: 0.2115 S13: 0.5709 REMARK 3 S21: -0.7161 S22: 0.1127 S23: -1.2580 REMARK 3 S31: -0.5748 S32: 0.3302 S33: 0.0360 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 129 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.8285 -3.9971 -32.6660 REMARK 3 T TENSOR REMARK 3 T11: 0.2201 T22: 0.2502 REMARK 3 T33: 0.2480 T12: -0.0007 REMARK 3 T13: -0.0549 T23: -0.0613 REMARK 3 L TENSOR REMARK 3 L11: 3.6680 L22: 3.0089 REMARK 3 L33: 3.9331 L12: -0.6537 REMARK 3 L13: -1.8854 L23: 1.1191 REMARK 3 S TENSOR REMARK 3 S11: -0.0531 S12: -0.5101 S13: 0.4332 REMARK 3 S21: 0.1643 S22: 0.0512 S23: 0.0359 REMARK 3 S31: -0.3486 S32: 0.0799 S33: -0.0015 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9Y0O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1000299676. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95373 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42948 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 43.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 12.30 REMARK 200 R MERGE FOR SHELL (I) : 1.35700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULPHATE, 30% W/V REMARK 280 POLYETHYLENE GLYCOL 4,000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.35650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.21350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.76750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.21350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.35650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.76750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 ALA A 1 REMARK 465 LYS A 189 REMARK 465 SER B 0 REMARK 465 ALA B 1 REMARK 465 LYS B 189 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 327 O HOH A 337 2.16 REMARK 500 O HOH A 315 O HOH A 347 2.17 REMARK 500 OE1 GLN B 97 O HOH B 301 2.17 REMARK 500 O HOH A 375 O HOH A 385 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 375 O HOH A 381 3554 1.99 REMARK 500 O HOH A 376 O HOH B 341 1655 2.11 REMARK 500 O ALA B 143 O2 GOL A 210 1455 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 30 CB CYS B 30 SG -0.121 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 7 -87.66 -107.02 REMARK 500 LYS B 7 -88.32 -106.98 REMARK 500 PHE B 29 35.31 -89.46 REMARK 500 ASN B 62 65.37 -116.53 REMARK 500 LYS B 158 -34.20 -132.05 REMARK 500 THR B 168 -168.55 -76.80 REMARK 500 SER B 169 -30.94 75.49 REMARK 500 REMARK 500 REMARK: NULL DBREF 9Y0O A 1 189 UNP P0AEG4 DSBA_ECOLI 20 208 DBREF 9Y0O B 1 189 UNP P0AEG4 DSBA_ECOLI 20 208 SEQADV 9Y0O SER A 0 UNP P0AEG4 EXPRESSION TAG SEQADV 9Y0O THR A 149 UNP P0AEG4 GLY 168 ENGINEERED MUTATION SEQADV 9Y0O SER B 0 UNP P0AEG4 EXPRESSION TAG SEQADV 9Y0O THR B 149 UNP P0AEG4 GLY 168 ENGINEERED MUTATION SEQRES 1 A 190 SER ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU SEQRES 2 A 190 GLU LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE SEQRES 3 A 190 PHE SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU SEQRES 4 A 190 VAL LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO SEQRES 5 A 190 GLU GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET SEQRES 6 A 190 GLY GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA SEQRES 7 A 190 VAL ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL SEQRES 8 A 190 PRO LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SEQRES 9 A 190 SER ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY SEQRES 10 A 190 ILE LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE SEQRES 11 A 190 VAL VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA SEQRES 12 A 190 ALA ASP VAL GLN LEU ARG THR VAL PRO ALA MET PHE VAL SEQRES 13 A 190 ASN GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SEQRES 14 A 190 SER ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR SEQRES 15 A 190 VAL LYS TYR LEU SER GLU LYS LYS SEQRES 1 B 190 SER ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU SEQRES 2 B 190 GLU LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE SEQRES 3 B 190 PHE SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU SEQRES 4 B 190 VAL LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO SEQRES 5 B 190 GLU GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET SEQRES 6 B 190 GLY GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA SEQRES 7 B 190 VAL ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL SEQRES 8 B 190 PRO LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SEQRES 9 B 190 SER ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY SEQRES 10 B 190 ILE LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE SEQRES 11 B 190 VAL VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA SEQRES 12 B 190 ALA ASP VAL GLN LEU ARG THR VAL PRO ALA MET PHE VAL SEQRES 13 B 190 ASN GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SEQRES 14 B 190 SER ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR SEQRES 15 B 190 VAL LYS TYR LEU SER GLU LYS LYS HET GOL A 201 14 HET GOL A 202 14 HET GOL A 203 14 HET GOL A 204 14 HET GOL A 205 14 HET GOL A 206 14 HET PEG A 207 17 HET GOL A 208 14 HET GOL A 209 14 HET GOL A 210 14 HET GOL B 201 14 HET GOL B 202 14 HET GOL B 203 14 HET GOL B 204 14 HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 13(C3 H8 O3) FORMUL 9 PEG C4 H10 O3 FORMUL 17 HOH *144(H2 O) HELIX 1 AA1 CYS A 30 VAL A 39 1 10 HELIX 2 AA2 HIS A 41 LEU A 50 1 10 HELIX 3 AA3 GLY A 65 GLY A 83 1 19 HELIX 4 AA4 VAL A 84 LYS A 98 1 15 HELIX 5 AA5 SER A 104 ALA A 115 1 12 HELIX 6 AA6 LYS A 118 ASN A 127 1 10 HELIX 7 AA7 SER A 128 VAL A 145 1 18 HELIX 8 AA8 PRO A 163 MET A 166 5 4 HELIX 9 AA9 ASN A 170 GLU A 187 1 18 HELIX 10 AB1 CYS B 30 VAL B 39 1 10 HELIX 11 AB2 HIS B 41 LEU B 50 1 10 HELIX 12 AB3 GLY B 66 GLY B 83 1 18 HELIX 13 AB4 VAL B 84 LYS B 98 1 15 HELIX 14 AB5 SER B 104 ALA B 115 1 12 HELIX 15 AB6 LYS B 118 ASN B 127 1 10 HELIX 16 AB7 SER B 128 VAL B 145 1 18 HELIX 17 AB8 PRO B 163 MET B 166 5 4 HELIX 18 AB9 ASN B 170 GLU B 187 1 18 SHEET 1 AA1 5 TYR A 9 THR A 11 0 SHEET 2 AA1 5 TYR A 159 LEU A 161 -1 O GLN A 160 N THR A 10 SHEET 3 AA1 5 ALA A 152 VAL A 155 -1 N VAL A 155 O TYR A 159 SHEET 4 AA1 5 VAL A 22 PHE A 26 -1 N LEU A 23 O PHE A 154 SHEET 5 AA1 5 MET A 56 HIS A 60 1 O THR A 57 N GLU A 24 SHEET 1 AA2 5 TYR B 9 THR B 11 0 SHEET 2 AA2 5 TYR B 159 LEU B 161 -1 O GLN B 160 N THR B 10 SHEET 3 AA2 5 ALA B 152 VAL B 155 -1 N VAL B 155 O TYR B 159 SHEET 4 AA2 5 VAL B 22 PHE B 26 -1 N LEU B 23 O PHE B 154 SHEET 5 AA2 5 MET B 56 HIS B 60 1 O TYR B 59 N GLU B 24 CISPEP 1 VAL A 150 PRO A 151 0 -3.51 CISPEP 2 VAL B 150 PRO B 151 0 -2.24 CRYST1 68.713 79.535 82.427 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014553 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012573 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012132 0.00000 CONECT 2955 2956 2957 2961 2962 CONECT 2956 2955 2963 CONECT 2957 2955 2958 2959 2964 CONECT 2958 2957 2965 CONECT 2959 2957 2960 2966 2967 CONECT 2960 2959 2968 CONECT 2961 2955 CONECT 2962 2955 CONECT 2963 2956 CONECT 2964 2957 CONECT 2965 2958 CONECT 2966 2959 CONECT 2967 2959 CONECT 2968 2960 CONECT 2969 2970 2971 2975 2976 CONECT 2970 2969 2977 CONECT 2971 2969 2972 2973 2978 CONECT 2972 2971 2979 CONECT 2973 2971 2974 2980 2981 CONECT 2974 2973 2982 CONECT 2975 2969 CONECT 2976 2969 CONECT 2977 2970 CONECT 2978 2971 CONECT 2979 2972 CONECT 2980 2973 CONECT 2981 2973 CONECT 2982 2974 CONECT 2983 2984 2985 2989 2990 CONECT 2984 2983 2991 CONECT 2985 2983 2986 2987 2992 CONECT 2986 2985 2993 CONECT 2987 2985 2988 2994 2995 CONECT 2988 2987 2996 CONECT 2989 2983 CONECT 2990 2983 CONECT 2991 2984 CONECT 2992 2985 CONECT 2993 2986 CONECT 2994 2987 CONECT 2995 2987 CONECT 2996 2988 CONECT 2997 2998 2999 3003 3004 CONECT 2998 2997 3005 CONECT 2999 2997 3000 3001 3006 CONECT 3000 2999 3007 CONECT 3001 2999 3002 3008 3009 CONECT 3002 3001 3010 CONECT 3003 2997 CONECT 3004 2997 CONECT 3005 2998 CONECT 3006 2999 CONECT 3007 3000 CONECT 3008 3001 CONECT 3009 3001 CONECT 3010 3002 CONECT 3011 3012 3013 3017 3018 CONECT 3012 3011 3019 CONECT 3013 3011 3014 3015 3020 CONECT 3014 3013 3021 CONECT 3015 3013 3016 3022 3023 CONECT 3016 3015 3024 CONECT 3017 3011 CONECT 3018 3011 CONECT 3019 3012 CONECT 3020 3013 CONECT 3021 3014 CONECT 3022 3015 CONECT 3023 3015 CONECT 3024 3016 CONECT 3025 3026 3027 3031 3032 CONECT 3026 3025 3033 CONECT 3027 3025 3028 3029 3034 CONECT 3028 3027 3035 CONECT 3029 3027 3030 3036 3037 CONECT 3030 3029 3038 CONECT 3031 3025 CONECT 3032 3025 CONECT 3033 3026 CONECT 3034 3027 CONECT 3035 3028 CONECT 3036 3029 CONECT 3037 3029 CONECT 3038 3030 CONECT 3039 3040 3041 3046 3047 CONECT 3040 3039 3048 CONECT 3041 3039 3042 3049 3050 CONECT 3042 3041 3043 CONECT 3043 3042 3044 3051 3052 CONECT 3044 3043 3045 3053 3054 CONECT 3045 3044 3055 CONECT 3046 3039 CONECT 3047 3039 CONECT 3048 3040 CONECT 3049 3041 CONECT 3050 3041 CONECT 3051 3043 CONECT 3052 3043 CONECT 3053 3044 CONECT 3054 3044 CONECT 3055 3045 CONECT 3056 3057 3058 3062 3063 CONECT 3057 3056 3064 CONECT 3058 3056 3059 3060 3065 CONECT 3059 3058 3066 CONECT 3060 3058 3061 3067 3068 CONECT 3061 3060 3069 CONECT 3062 3056 CONECT 3063 3056 CONECT 3064 3057 CONECT 3065 3058 CONECT 3066 3059 CONECT 3067 3060 CONECT 3068 3060 CONECT 3069 3061 CONECT 3070 3071 3072 3076 3077 CONECT 3071 3070 3078 CONECT 3072 3070 3073 3074 3079 CONECT 3073 3072 3080 CONECT 3074 3072 3075 3081 3082 CONECT 3075 3074 3083 CONECT 3076 3070 CONECT 3077 3070 CONECT 3078 3071 CONECT 3079 3072 CONECT 3080 3073 CONECT 3081 3074 CONECT 3082 3074 CONECT 3083 3075 CONECT 3084 3085 3086 3090 3091 CONECT 3085 3084 3092 CONECT 3086 3084 3087 3088 3093 CONECT 3087 3086 3094 CONECT 3088 3086 3089 3095 3096 CONECT 3089 3088 3097 CONECT 3090 3084 CONECT 3091 3084 CONECT 3092 3085 CONECT 3093 3086 CONECT 3094 3087 CONECT 3095 3088 CONECT 3096 3088 CONECT 3097 3089 CONECT 3098 3099 3100 3104 3105 CONECT 3099 3098 3106 CONECT 3100 3098 3101 3102 3107 CONECT 3101 3100 3108 CONECT 3102 3100 3103 3109 3110 CONECT 3103 3102 3111 CONECT 3104 3098 CONECT 3105 3098 CONECT 3106 3099 CONECT 3107 3100 CONECT 3108 3101 CONECT 3109 3102 CONECT 3110 3102 CONECT 3111 3103 CONECT 3112 3113 3114 3118 3119 CONECT 3113 3112 3120 CONECT 3114 3112 3115 3116 3121 CONECT 3115 3114 3122 CONECT 3116 3114 3117 3123 3124 CONECT 3117 3116 3125 CONECT 3118 3112 CONECT 3119 3112 CONECT 3120 3113 CONECT 3121 3114 CONECT 3122 3115 CONECT 3123 3116 CONECT 3124 3116 CONECT 3125 3117 CONECT 3126 3127 3128 3132 3133 CONECT 3127 3126 3134 CONECT 3128 3126 3129 3130 3135 CONECT 3129 3128 3136 CONECT 3130 3128 3131 3137 3138 CONECT 3131 3130 3139 CONECT 3132 3126 CONECT 3133 3126 CONECT 3134 3127 CONECT 3135 3128 CONECT 3136 3129 CONECT 3137 3130 CONECT 3138 3130 CONECT 3139 3131 CONECT 3140 3141 3142 3146 3147 CONECT 3141 3140 3148 CONECT 3142 3140 3143 3144 3149 CONECT 3143 3142 3150 CONECT 3144 3142 3145 3151 3152 CONECT 3145 3144 3153 CONECT 3146 3140 CONECT 3147 3140 CONECT 3148 3141 CONECT 3149 3142 CONECT 3150 3143 CONECT 3151 3144 CONECT 3152 3144 CONECT 3153 3145 MASTER 434 0 14 18 10 0 0 6 3181 2 199 30 END