data_9Y7D # _entry.id 9Y7D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.406 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9Y7D pdb_00009y7d 10.2210/pdb9y7d/pdb WWPDB D_1000299965 ? ? EMDB EMD-72653 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-10-15 ? 2 'EM metadata' 1 0 2025-10-15 ? 3 FSC 1 0 2025-10-15 ? 4 'Half map' 1 0 2025-10-15 1 5 'Half map' 1 0 2025-10-15 2 6 Image 1 0 2025-10-15 ? 7 'Primary map' 1 0 2025-10-15 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9Y7D _pdbx_database_status.recvd_initial_deposition_date 2025-09-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'Cereblon with Golcadomide and Ikaros ZF1-2-3' EMD-43788 'associated EM volume' EMDB 'Cereblon with Golcadomide and Ikaros ZF1-2-3' EMD-72653 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email randy.watson@bms.com _pdbx_contact_author.name_first Edmond _pdbx_contact_author.name_last Watson _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7756-4099 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Watson, E.R.' 1 0000-0001-7756-4099 'Lander, G.C.' 2 0000-0003-4921-1135 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Discovery of Golcadomide (CC-99282) as a promising drug candidate for diffuse large B-cell lymphoma' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Watson, E.R.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein cereblon' 46596.566 1 ? ? ? ? 2 polymer man 'DNA-binding protein Ikaros' 12605.633 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 4 non-polymer syn Golcadomide 535.567 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Ikaros family zinc finger protein 1,Lymphoid transcription factor LyF-1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSMEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQK DRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSA VQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSN PIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYV HETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPD KVILCL ; ;GSMEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQK DRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSA VQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSN PIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYV HETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPD KVILCL ; B ? 2 'polypeptide(L)' no no ;GRMLDASGEKMNGSHRDQGSSALSGVGGIRLPNGKLKCDICGIICIGPNVLMVHKRSHTGERPFQCNQCGASFTQKGNLL RHIKLHSGEKPFKCHLCNYACRRRDALTGHLRTHS ; ;GRMLDASGEKMNGSHRDQGSSALSGVGGIRLPNGKLKCDICGIICIGPNVLMVHKRSHTGERPFQCNQCGASFTQKGNLL RHIKLHSGEKPFKCHLCNYACRRRDALTGHLRTHS ; C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 Golcadomide A1AF4 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 GLU n 1 5 ALA n 1 6 LYS n 1 7 LYS n 1 8 PRO n 1 9 ASN n 1 10 ILE n 1 11 ILE n 1 12 ASN n 1 13 PHE n 1 14 ASP n 1 15 THR n 1 16 SER n 1 17 LEU n 1 18 PRO n 1 19 THR n 1 20 SER n 1 21 HIS n 1 22 THR n 1 23 TYR n 1 24 LEU n 1 25 GLY n 1 26 ALA n 1 27 ASP n 1 28 MET n 1 29 GLU n 1 30 GLU n 1 31 PHE n 1 32 HIS n 1 33 GLY n 1 34 ARG n 1 35 THR n 1 36 LEU n 1 37 HIS n 1 38 ASP n 1 39 ASP n 1 40 ASP n 1 41 SER n 1 42 CYS n 1 43 GLN n 1 44 VAL n 1 45 ILE n 1 46 PRO n 1 47 VAL n 1 48 LEU n 1 49 PRO n 1 50 GLN n 1 51 VAL n 1 52 MET n 1 53 MET n 1 54 ILE n 1 55 LEU n 1 56 ILE n 1 57 PRO n 1 58 GLY n 1 59 GLN n 1 60 THR n 1 61 LEU n 1 62 PRO n 1 63 LEU n 1 64 GLN n 1 65 LEU n 1 66 PHE n 1 67 HIS n 1 68 PRO n 1 69 GLN n 1 70 GLU n 1 71 VAL n 1 72 SER n 1 73 MET n 1 74 VAL n 1 75 ARG n 1 76 ASN n 1 77 LEU n 1 78 ILE n 1 79 GLN n 1 80 LYS n 1 81 ASP n 1 82 ARG n 1 83 THR n 1 84 PHE n 1 85 ALA n 1 86 VAL n 1 87 LEU n 1 88 ALA n 1 89 TYR n 1 90 SER n 1 91 ASN n 1 92 VAL n 1 93 GLN n 1 94 GLU n 1 95 ARG n 1 96 GLU n 1 97 ALA n 1 98 GLN n 1 99 PHE n 1 100 GLY n 1 101 THR n 1 102 THR n 1 103 ALA n 1 104 GLU n 1 105 ILE n 1 106 TYR n 1 107 ALA n 1 108 TYR n 1 109 ARG n 1 110 GLU n 1 111 GLU n 1 112 GLN n 1 113 ASP n 1 114 PHE n 1 115 GLY n 1 116 ILE n 1 117 GLU n 1 118 ILE n 1 119 VAL n 1 120 LYS n 1 121 VAL n 1 122 LYS n 1 123 ALA n 1 124 ILE n 1 125 GLY n 1 126 ARG n 1 127 GLN n 1 128 ARG n 1 129 PHE n 1 130 LYS n 1 131 VAL n 1 132 LEU n 1 133 GLU n 1 134 LEU n 1 135 ARG n 1 136 THR n 1 137 GLN n 1 138 SER n 1 139 ASP n 1 140 GLY n 1 141 ILE n 1 142 GLN n 1 143 GLN n 1 144 ALA n 1 145 LYS n 1 146 VAL n 1 147 GLN n 1 148 ILE n 1 149 LEU n 1 150 PRO n 1 151 GLU n 1 152 CYS n 1 153 VAL n 1 154 LEU n 1 155 PRO n 1 156 SER n 1 157 THR n 1 158 MET n 1 159 SER n 1 160 ALA n 1 161 VAL n 1 162 GLN n 1 163 LEU n 1 164 GLU n 1 165 SER n 1 166 LEU n 1 167 ASN n 1 168 LYS n 1 169 CYS n 1 170 GLN n 1 171 ILE n 1 172 PHE n 1 173 PRO n 1 174 SER n 1 175 LYS n 1 176 PRO n 1 177 VAL n 1 178 SER n 1 179 ARG n 1 180 GLU n 1 181 ASP n 1 182 GLN n 1 183 CYS n 1 184 SER n 1 185 TYR n 1 186 LYS n 1 187 TRP n 1 188 TRP n 1 189 GLN n 1 190 LYS n 1 191 TYR n 1 192 GLN n 1 193 LYS n 1 194 ARG n 1 195 LYS n 1 196 PHE n 1 197 HIS n 1 198 CYS n 1 199 ALA n 1 200 ASN n 1 201 LEU n 1 202 THR n 1 203 SER n 1 204 TRP n 1 205 PRO n 1 206 ARG n 1 207 TRP n 1 208 LEU n 1 209 TYR n 1 210 SER n 1 211 LEU n 1 212 TYR n 1 213 ASP n 1 214 ALA n 1 215 GLU n 1 216 THR n 1 217 LEU n 1 218 MET n 1 219 ASP n 1 220 ARG n 1 221 ILE n 1 222 LYS n 1 223 LYS n 1 224 GLN n 1 225 LEU n 1 226 ARG n 1 227 GLU n 1 228 TRP n 1 229 ASP n 1 230 GLU n 1 231 ASN n 1 232 LEU n 1 233 LYS n 1 234 ASP n 1 235 ASP n 1 236 SER n 1 237 LEU n 1 238 PRO n 1 239 SER n 1 240 ASN n 1 241 PRO n 1 242 ILE n 1 243 ASP n 1 244 PHE n 1 245 SER n 1 246 TYR n 1 247 ARG n 1 248 VAL n 1 249 ALA n 1 250 ALA n 1 251 CYS n 1 252 LEU n 1 253 PRO n 1 254 ILE n 1 255 ASP n 1 256 ASP n 1 257 VAL n 1 258 LEU n 1 259 ARG n 1 260 ILE n 1 261 GLN n 1 262 LEU n 1 263 LEU n 1 264 LYS n 1 265 ILE n 1 266 GLY n 1 267 SER n 1 268 ALA n 1 269 ILE n 1 270 GLN n 1 271 ARG n 1 272 LEU n 1 273 ARG n 1 274 CYS n 1 275 GLU n 1 276 LEU n 1 277 ASP n 1 278 ILE n 1 279 MET n 1 280 ASN n 1 281 LYS n 1 282 CYS n 1 283 THR n 1 284 SER n 1 285 LEU n 1 286 CYS n 1 287 CYS n 1 288 LYS n 1 289 GLN n 1 290 CYS n 1 291 GLN n 1 292 GLU n 1 293 THR n 1 294 GLU n 1 295 ILE n 1 296 THR n 1 297 THR n 1 298 LYS n 1 299 ASN n 1 300 GLU n 1 301 ILE n 1 302 PHE n 1 303 SER n 1 304 LEU n 1 305 SER n 1 306 LEU n 1 307 CYS n 1 308 GLY n 1 309 PRO n 1 310 MET n 1 311 ALA n 1 312 ALA n 1 313 TYR n 1 314 VAL n 1 315 ASN n 1 316 PRO n 1 317 HIS n 1 318 GLY n 1 319 TYR n 1 320 VAL n 1 321 HIS n 1 322 GLU n 1 323 THR n 1 324 LEU n 1 325 THR n 1 326 VAL n 1 327 TYR n 1 328 LYS n 1 329 ALA n 1 330 CYS n 1 331 ASN n 1 332 LEU n 1 333 ASN n 1 334 LEU n 1 335 ILE n 1 336 GLY n 1 337 ARG n 1 338 PRO n 1 339 SER n 1 340 THR n 1 341 GLU n 1 342 HIS n 1 343 SER n 1 344 TRP n 1 345 PHE n 1 346 PRO n 1 347 GLY n 1 348 TYR n 1 349 ALA n 1 350 TRP n 1 351 THR n 1 352 VAL n 1 353 ALA n 1 354 GLN n 1 355 CYS n 1 356 LYS n 1 357 ILE n 1 358 CYS n 1 359 ALA n 1 360 SER n 1 361 HIS n 1 362 ILE n 1 363 GLY n 1 364 TRP n 1 365 LYS n 1 366 PHE n 1 367 THR n 1 368 ALA n 1 369 THR n 1 370 LYS n 1 371 LYS n 1 372 ASP n 1 373 MET n 1 374 SER n 1 375 PRO n 1 376 GLN n 1 377 LYS n 1 378 PHE n 1 379 TRP n 1 380 GLY n 1 381 LEU n 1 382 THR n 1 383 ARG n 1 384 SER n 1 385 ALA n 1 386 LEU n 1 387 LEU n 1 388 PRO n 1 389 THR n 1 390 ILE n 1 391 PRO n 1 392 ASP n 1 393 THR n 1 394 GLU n 1 395 ASP n 1 396 GLU n 1 397 ILE n 1 398 SER n 1 399 PRO n 1 400 ASP n 1 401 LYS n 1 402 VAL n 1 403 ILE n 1 404 LEU n 1 405 CYS n 1 406 LEU n 2 1 GLY n 2 2 ARG n 2 3 MET n 2 4 LEU n 2 5 ASP n 2 6 ALA n 2 7 SER n 2 8 GLY n 2 9 GLU n 2 10 LYS n 2 11 MET n 2 12 ASN n 2 13 GLY n 2 14 SER n 2 15 HIS n 2 16 ARG n 2 17 ASP n 2 18 GLN n 2 19 GLY n 2 20 SER n 2 21 SER n 2 22 ALA n 2 23 LEU n 2 24 SER n 2 25 GLY n 2 26 VAL n 2 27 GLY n 2 28 GLY n 2 29 ILE n 2 30 ARG n 2 31 LEU n 2 32 PRO n 2 33 ASN n 2 34 GLY n 2 35 LYS n 2 36 LEU n 2 37 LYS n 2 38 CYS n 2 39 ASP n 2 40 ILE n 2 41 CYS n 2 42 GLY n 2 43 ILE n 2 44 ILE n 2 45 CYS n 2 46 ILE n 2 47 GLY n 2 48 PRO n 2 49 ASN n 2 50 VAL n 2 51 LEU n 2 52 MET n 2 53 VAL n 2 54 HIS n 2 55 LYS n 2 56 ARG n 2 57 SER n 2 58 HIS n 2 59 THR n 2 60 GLY n 2 61 GLU n 2 62 ARG n 2 63 PRO n 2 64 PHE n 2 65 GLN n 2 66 CYS n 2 67 ASN n 2 68 GLN n 2 69 CYS n 2 70 GLY n 2 71 ALA n 2 72 SER n 2 73 PHE n 2 74 THR n 2 75 GLN n 2 76 LYS n 2 77 GLY n 2 78 ASN n 2 79 LEU n 2 80 LEU n 2 81 ARG n 2 82 HIS n 2 83 ILE n 2 84 LYS n 2 85 LEU n 2 86 HIS n 2 87 SER n 2 88 GLY n 2 89 GLU n 2 90 LYS n 2 91 PRO n 2 92 PHE n 2 93 LYS n 2 94 CYS n 2 95 HIS n 2 96 LEU n 2 97 CYS n 2 98 ASN n 2 99 TYR n 2 100 ALA n 2 101 CYS n 2 102 ARG n 2 103 ARG n 2 104 ARG n 2 105 ASP n 2 106 ALA n 2 107 LEU n 2 108 THR n 2 109 GLY n 2 110 HIS n 2 111 LEU n 2 112 ARG n 2 113 THR n 2 114 HIS n 2 115 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 406 human ? 'CRBN, AD-006' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 115 human ? 'IKZF1, IK1, IKAROS, LYF1, ZNFN1A1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1AF4 non-polymer . Golcadomide ? 'C28 H30 F N5 O5' 535.567 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 37 ? ? ? B . n A 1 2 SER 2 38 ? ? ? B . n A 1 3 MET 3 39 ? ? ? B . n A 1 4 GLU 4 40 ? ? ? B . n A 1 5 ALA 5 41 ? ? ? B . n A 1 6 LYS 6 42 ? ? ? B . n A 1 7 LYS 7 43 ? ? ? B . n A 1 8 PRO 8 44 ? ? ? B . n A 1 9 ASN 9 45 ? ? ? B . n A 1 10 ILE 10 46 ? ? ? B . n A 1 11 ILE 11 47 ? ? ? B . n A 1 12 ASN 12 48 ? ? ? B . n A 1 13 PHE 13 49 49 PHE PHE B . n A 1 14 ASP 14 50 50 ASP ASP B . n A 1 15 THR 15 51 51 THR THR B . n A 1 16 SER 16 52 52 SER SER B . n A 1 17 LEU 17 53 53 LEU LEU B . n A 1 18 PRO 18 54 54 PRO PRO B . n A 1 19 THR 19 55 55 THR THR B . n A 1 20 SER 20 56 56 SER SER B . n A 1 21 HIS 21 57 57 HIS HIS B . n A 1 22 THR 22 58 58 THR THR B . n A 1 23 TYR 23 59 59 TYR TYR B . n A 1 24 LEU 24 60 60 LEU LEU B . n A 1 25 GLY 25 61 61 GLY GLY B . n A 1 26 ALA 26 62 62 ALA ALA B . n A 1 27 ASP 27 63 63 ASP ASP B . n A 1 28 MET 28 64 64 MET MET B . n A 1 29 GLU 29 65 65 GLU GLU B . n A 1 30 GLU 30 66 66 GLU GLU B . n A 1 31 PHE 31 67 67 PHE PHE B . n A 1 32 HIS 32 68 68 HIS HIS B . n A 1 33 GLY 33 69 69 GLY GLY B . n A 1 34 ARG 34 70 70 ARG ARG B . n A 1 35 THR 35 71 71 THR THR B . n A 1 36 LEU 36 72 72 LEU LEU B . n A 1 37 HIS 37 73 73 HIS HIS B . n A 1 38 ASP 38 74 74 ASP ASP B . n A 1 39 ASP 39 75 75 ASP ASP B . n A 1 40 ASP 40 76 76 ASP ASP B . n A 1 41 SER 41 77 77 SER SER B . n A 1 42 CYS 42 78 78 CYS CYS B . n A 1 43 GLN 43 79 79 GLN GLN B . n A 1 44 VAL 44 80 80 VAL VAL B . n A 1 45 ILE 45 81 81 ILE ILE B . n A 1 46 PRO 46 82 82 PRO PRO B . n A 1 47 VAL 47 83 83 VAL VAL B . n A 1 48 LEU 48 84 84 LEU LEU B . n A 1 49 PRO 49 85 85 PRO PRO B . n A 1 50 GLN 50 86 86 GLN GLN B . n A 1 51 VAL 51 87 87 VAL VAL B . n A 1 52 MET 52 88 88 MET MET B . n A 1 53 MET 53 89 89 MET MET B . n A 1 54 ILE 54 90 90 ILE ILE B . n A 1 55 LEU 55 91 91 LEU LEU B . n A 1 56 ILE 56 92 92 ILE ILE B . n A 1 57 PRO 57 93 93 PRO PRO B . n A 1 58 GLY 58 94 94 GLY GLY B . n A 1 59 GLN 59 95 95 GLN GLN B . n A 1 60 THR 60 96 96 THR THR B . n A 1 61 LEU 61 97 97 LEU LEU B . n A 1 62 PRO 62 98 98 PRO PRO B . n A 1 63 LEU 63 99 99 LEU LEU B . n A 1 64 GLN 64 100 100 GLN GLN B . n A 1 65 LEU 65 101 101 LEU LEU B . n A 1 66 PHE 66 102 102 PHE PHE B . n A 1 67 HIS 67 103 103 HIS HIS B . n A 1 68 PRO 68 104 104 PRO PRO B . n A 1 69 GLN 69 105 105 GLN GLN B . n A 1 70 GLU 70 106 106 GLU GLU B . n A 1 71 VAL 71 107 107 VAL VAL B . n A 1 72 SER 72 108 108 SER SER B . n A 1 73 MET 73 109 109 MET MET B . n A 1 74 VAL 74 110 110 VAL VAL B . n A 1 75 ARG 75 111 111 ARG ARG B . n A 1 76 ASN 76 112 112 ASN ASN B . n A 1 77 LEU 77 113 113 LEU LEU B . n A 1 78 ILE 78 114 114 ILE ILE B . n A 1 79 GLN 79 115 115 GLN GLN B . n A 1 80 LYS 80 116 116 LYS LYS B . n A 1 81 ASP 81 117 117 ASP ASP B . n A 1 82 ARG 82 118 118 ARG ARG B . n A 1 83 THR 83 119 119 THR THR B . n A 1 84 PHE 84 120 120 PHE PHE B . n A 1 85 ALA 85 121 121 ALA ALA B . n A 1 86 VAL 86 122 122 VAL VAL B . n A 1 87 LEU 87 123 123 LEU LEU B . n A 1 88 ALA 88 124 124 ALA ALA B . n A 1 89 TYR 89 125 125 TYR TYR B . n A 1 90 SER 90 126 126 SER SER B . n A 1 91 ASN 91 127 127 ASN ASN B . n A 1 92 VAL 92 128 128 VAL VAL B . n A 1 93 GLN 93 129 129 GLN GLN B . n A 1 94 GLU 94 130 130 GLU GLU B . n A 1 95 ARG 95 131 131 ARG ARG B . n A 1 96 GLU 96 132 132 GLU GLU B . n A 1 97 ALA 97 133 133 ALA ALA B . n A 1 98 GLN 98 134 134 GLN GLN B . n A 1 99 PHE 99 135 135 PHE PHE B . n A 1 100 GLY 100 136 136 GLY GLY B . n A 1 101 THR 101 137 137 THR THR B . n A 1 102 THR 102 138 138 THR THR B . n A 1 103 ALA 103 139 139 ALA ALA B . n A 1 104 GLU 104 140 140 GLU GLU B . n A 1 105 ILE 105 141 141 ILE ILE B . n A 1 106 TYR 106 142 142 TYR TYR B . n A 1 107 ALA 107 143 143 ALA ALA B . n A 1 108 TYR 108 144 144 TYR TYR B . n A 1 109 ARG 109 145 145 ARG ARG B . n A 1 110 GLU 110 146 146 GLU GLU B . n A 1 111 GLU 111 147 147 GLU GLU B . n A 1 112 GLN 112 148 148 GLN GLN B . n A 1 113 ASP 113 149 149 ASP ASP B . n A 1 114 PHE 114 150 150 PHE PHE B . n A 1 115 GLY 115 151 151 GLY GLY B . n A 1 116 ILE 116 152 152 ILE ILE B . n A 1 117 GLU 117 153 153 GLU GLU B . n A 1 118 ILE 118 154 154 ILE ILE B . n A 1 119 VAL 119 155 155 VAL VAL B . n A 1 120 LYS 120 156 156 LYS LYS B . n A 1 121 VAL 121 157 157 VAL VAL B . n A 1 122 LYS 122 158 158 LYS LYS B . n A 1 123 ALA 123 159 159 ALA ALA B . n A 1 124 ILE 124 160 160 ILE ILE B . n A 1 125 GLY 125 161 161 GLY GLY B . n A 1 126 ARG 126 162 162 ARG ARG B . n A 1 127 GLN 127 163 163 GLN GLN B . n A 1 128 ARG 128 164 164 ARG ARG B . n A 1 129 PHE 129 165 165 PHE PHE B . n A 1 130 LYS 130 166 166 LYS LYS B . n A 1 131 VAL 131 167 167 VAL VAL B . n A 1 132 LEU 132 168 168 LEU LEU B . n A 1 133 GLU 133 169 169 GLU GLU B . n A 1 134 LEU 134 170 170 LEU LEU B . n A 1 135 ARG 135 171 171 ARG ARG B . n A 1 136 THR 136 172 172 THR THR B . n A 1 137 GLN 137 173 173 GLN GLN B . n A 1 138 SER 138 174 174 SER SER B . n A 1 139 ASP 139 175 175 ASP ASP B . n A 1 140 GLY 140 176 176 GLY GLY B . n A 1 141 ILE 141 177 177 ILE ILE B . n A 1 142 GLN 142 178 178 GLN GLN B . n A 1 143 GLN 143 179 179 GLN GLN B . n A 1 144 ALA 144 180 180 ALA ALA B . n A 1 145 LYS 145 181 181 LYS LYS B . n A 1 146 VAL 146 182 182 VAL VAL B . n A 1 147 GLN 147 183 183 GLN GLN B . n A 1 148 ILE 148 184 184 ILE ILE B . n A 1 149 LEU 149 185 185 LEU LEU B . n A 1 150 PRO 150 186 186 PRO PRO B . n A 1 151 GLU 151 187 187 GLU GLU B . n A 1 152 CYS 152 188 188 CYS CYS B . n A 1 153 VAL 153 189 189 VAL VAL B . n A 1 154 LEU 154 190 190 LEU LEU B . n A 1 155 PRO 155 191 191 PRO PRO B . n A 1 156 SER 156 192 192 SER SER B . n A 1 157 THR 157 193 193 THR THR B . n A 1 158 MET 158 194 194 MET MET B . n A 1 159 SER 159 195 195 SER SER B . n A 1 160 ALA 160 196 196 ALA ALA B . n A 1 161 VAL 161 197 197 VAL VAL B . n A 1 162 GLN 162 198 198 GLN GLN B . n A 1 163 LEU 163 199 199 LEU LEU B . n A 1 164 GLU 164 200 200 GLU GLU B . n A 1 165 SER 165 201 201 SER SER B . n A 1 166 LEU 166 202 202 LEU LEU B . n A 1 167 ASN 167 203 203 ASN ASN B . n A 1 168 LYS 168 204 204 LYS LYS B . n A 1 169 CYS 169 205 205 CYS CYS B . n A 1 170 GLN 170 206 206 GLN GLN B . n A 1 171 ILE 171 207 207 ILE ILE B . n A 1 172 PHE 172 208 208 PHE PHE B . n A 1 173 PRO 173 209 209 PRO PRO B . n A 1 174 SER 174 210 210 SER SER B . n A 1 175 LYS 175 211 211 LYS LYS B . n A 1 176 PRO 176 212 212 PRO PRO B . n A 1 177 VAL 177 213 213 VAL VAL B . n A 1 178 SER 178 214 214 SER SER B . n A 1 179 ARG 179 215 215 ARG ARG B . n A 1 180 GLU 180 216 216 GLU GLU B . n A 1 181 ASP 181 217 217 ASP ASP B . n A 1 182 GLN 182 218 218 GLN GLN B . n A 1 183 CYS 183 219 219 CYS CYS B . n A 1 184 SER 184 220 220 SER SER B . n A 1 185 TYR 185 221 221 TYR TYR B . n A 1 186 LYS 186 222 222 LYS LYS B . n A 1 187 TRP 187 223 223 TRP TRP B . n A 1 188 TRP 188 224 224 TRP TRP B . n A 1 189 GLN 189 225 225 GLN GLN B . n A 1 190 LYS 190 226 226 LYS LYS B . n A 1 191 TYR 191 227 227 TYR TYR B . n A 1 192 GLN 192 228 228 GLN GLN B . n A 1 193 LYS 193 229 229 LYS LYS B . n A 1 194 ARG 194 230 230 ARG ARG B . n A 1 195 LYS 195 231 231 LYS LYS B . n A 1 196 PHE 196 232 232 PHE PHE B . n A 1 197 HIS 197 233 233 HIS HIS B . n A 1 198 CYS 198 234 234 CYS CYS B . n A 1 199 ALA 199 235 235 ALA ALA B . n A 1 200 ASN 200 236 236 ASN ASN B . n A 1 201 LEU 201 237 237 LEU LEU B . n A 1 202 THR 202 238 238 THR THR B . n A 1 203 SER 203 239 239 SER SER B . n A 1 204 TRP 204 240 240 TRP TRP B . n A 1 205 PRO 205 241 241 PRO PRO B . n A 1 206 ARG 206 242 242 ARG ARG B . n A 1 207 TRP 207 243 243 TRP TRP B . n A 1 208 LEU 208 244 244 LEU LEU B . n A 1 209 TYR 209 245 245 TYR TYR B . n A 1 210 SER 210 246 246 SER SER B . n A 1 211 LEU 211 247 247 LEU LEU B . n A 1 212 TYR 212 248 248 TYR TYR B . n A 1 213 ASP 213 249 249 ASP ASP B . n A 1 214 ALA 214 250 250 ALA ALA B . n A 1 215 GLU 215 251 251 GLU GLU B . n A 1 216 THR 216 252 252 THR THR B . n A 1 217 LEU 217 253 253 LEU LEU B . n A 1 218 MET 218 254 254 MET MET B . n A 1 219 ASP 219 255 255 ASP ASP B . n A 1 220 ARG 220 256 256 ARG ARG B . n A 1 221 ILE 221 257 257 ILE ILE B . n A 1 222 LYS 222 258 258 LYS LYS B . n A 1 223 LYS 223 259 259 LYS LYS B . n A 1 224 GLN 224 260 260 GLN GLN B . n A 1 225 LEU 225 261 261 LEU LEU B . n A 1 226 ARG 226 262 262 ARG ARG B . n A 1 227 GLU 227 263 263 GLU GLU B . n A 1 228 TRP 228 264 264 TRP TRP B . n A 1 229 ASP 229 265 265 ASP ASP B . n A 1 230 GLU 230 266 266 GLU GLU B . n A 1 231 ASN 231 267 267 ASN ASN B . n A 1 232 LEU 232 268 268 LEU LEU B . n A 1 233 LYS 233 269 269 LYS LYS B . n A 1 234 ASP 234 270 270 ASP ASP B . n A 1 235 ASP 235 271 271 ASP ASP B . n A 1 236 SER 236 272 272 SER SER B . n A 1 237 LEU 237 273 273 LEU LEU B . n A 1 238 PRO 238 274 274 PRO PRO B . n A 1 239 SER 239 275 275 SER SER B . n A 1 240 ASN 240 276 276 ASN ASN B . n A 1 241 PRO 241 277 277 PRO PRO B . n A 1 242 ILE 242 278 278 ILE ILE B . n A 1 243 ASP 243 279 279 ASP ASP B . n A 1 244 PHE 244 280 280 PHE PHE B . n A 1 245 SER 245 281 281 SER SER B . n A 1 246 TYR 246 282 282 TYR TYR B . n A 1 247 ARG 247 283 283 ARG ARG B . n A 1 248 VAL 248 284 284 VAL VAL B . n A 1 249 ALA 249 285 285 ALA ALA B . n A 1 250 ALA 250 286 286 ALA ALA B . n A 1 251 CYS 251 287 287 CYS CYS B . n A 1 252 LEU 252 288 288 LEU LEU B . n A 1 253 PRO 253 289 289 PRO PRO B . n A 1 254 ILE 254 290 290 ILE ILE B . n A 1 255 ASP 255 291 291 ASP ASP B . n A 1 256 ASP 256 292 292 ASP ASP B . n A 1 257 VAL 257 293 293 VAL VAL B . n A 1 258 LEU 258 294 294 LEU LEU B . n A 1 259 ARG 259 295 295 ARG ARG B . n A 1 260 ILE 260 296 296 ILE ILE B . n A 1 261 GLN 261 297 297 GLN GLN B . n A 1 262 LEU 262 298 298 LEU LEU B . n A 1 263 LEU 263 299 299 LEU LEU B . n A 1 264 LYS 264 300 300 LYS LYS B . n A 1 265 ILE 265 301 301 ILE ILE B . n A 1 266 GLY 266 302 302 GLY GLY B . n A 1 267 SER 267 303 303 SER SER B . n A 1 268 ALA 268 304 304 ALA ALA B . n A 1 269 ILE 269 305 305 ILE ILE B . n A 1 270 GLN 270 306 306 GLN GLN B . n A 1 271 ARG 271 307 307 ARG ARG B . n A 1 272 LEU 272 308 308 LEU LEU B . n A 1 273 ARG 273 309 309 ARG ARG B . n A 1 274 CYS 274 310 310 CYS CYS B . n A 1 275 GLU 275 311 311 GLU GLU B . n A 1 276 LEU 276 312 312 LEU LEU B . n A 1 277 ASP 277 313 313 ASP ASP B . n A 1 278 ILE 278 314 314 ILE ILE B . n A 1 279 MET 279 315 315 MET MET B . n A 1 280 ASN 280 316 316 ASN ASN B . n A 1 281 LYS 281 317 317 LYS LYS B . n A 1 282 CYS 282 318 318 CYS CYS B . n A 1 283 THR 283 319 319 THR THR B . n A 1 284 SER 284 320 320 SER SER B . n A 1 285 LEU 285 321 321 LEU LEU B . n A 1 286 CYS 286 322 322 CYS CYS B . n A 1 287 CYS 287 323 323 CYS CYS B . n A 1 288 LYS 288 324 324 LYS LYS B . n A 1 289 GLN 289 325 325 GLN GLN B . n A 1 290 CYS 290 326 326 CYS CYS B . n A 1 291 GLN 291 327 327 GLN GLN B . n A 1 292 GLU 292 328 328 GLU GLU B . n A 1 293 THR 293 329 329 THR THR B . n A 1 294 GLU 294 330 330 GLU GLU B . n A 1 295 ILE 295 331 331 ILE ILE B . n A 1 296 THR 296 332 332 THR THR B . n A 1 297 THR 297 333 333 THR THR B . n A 1 298 LYS 298 334 334 LYS LYS B . n A 1 299 ASN 299 335 335 ASN ASN B . n A 1 300 GLU 300 336 336 GLU GLU B . n A 1 301 ILE 301 337 337 ILE ILE B . n A 1 302 PHE 302 338 338 PHE PHE B . n A 1 303 SER 303 339 339 SER SER B . n A 1 304 LEU 304 340 340 LEU LEU B . n A 1 305 SER 305 341 341 SER SER B . n A 1 306 LEU 306 342 342 LEU LEU B . n A 1 307 CYS 307 343 343 CYS CYS B . n A 1 308 GLY 308 344 344 GLY GLY B . n A 1 309 PRO 309 345 345 PRO PRO B . n A 1 310 MET 310 346 346 MET MET B . n A 1 311 ALA 311 347 347 ALA ALA B . n A 1 312 ALA 312 348 348 ALA ALA B . n A 1 313 TYR 313 349 349 TYR TYR B . n A 1 314 VAL 314 350 350 VAL VAL B . n A 1 315 ASN 315 351 351 ASN ASN B . n A 1 316 PRO 316 352 352 PRO PRO B . n A 1 317 HIS 317 353 353 HIS HIS B . n A 1 318 GLY 318 354 354 GLY GLY B . n A 1 319 TYR 319 355 355 TYR TYR B . n A 1 320 VAL 320 356 356 VAL VAL B . n A 1 321 HIS 321 357 357 HIS HIS B . n A 1 322 GLU 322 358 358 GLU GLU B . n A 1 323 THR 323 359 359 THR THR B . n A 1 324 LEU 324 360 360 LEU LEU B . n A 1 325 THR 325 361 361 THR THR B . n A 1 326 VAL 326 362 362 VAL VAL B . n A 1 327 TYR 327 363 363 TYR TYR B . n A 1 328 LYS 328 364 364 LYS LYS B . n A 1 329 ALA 329 365 365 ALA ALA B . n A 1 330 CYS 330 366 366 CYS CYS B . n A 1 331 ASN 331 367 367 ASN ASN B . n A 1 332 LEU 332 368 368 LEU LEU B . n A 1 333 ASN 333 369 369 ASN ASN B . n A 1 334 LEU 334 370 370 LEU LEU B . n A 1 335 ILE 335 371 371 ILE ILE B . n A 1 336 GLY 336 372 372 GLY GLY B . n A 1 337 ARG 337 373 373 ARG ARG B . n A 1 338 PRO 338 374 374 PRO PRO B . n A 1 339 SER 339 375 375 SER SER B . n A 1 340 THR 340 376 376 THR THR B . n A 1 341 GLU 341 377 377 GLU GLU B . n A 1 342 HIS 342 378 378 HIS HIS B . n A 1 343 SER 343 379 379 SER SER B . n A 1 344 TRP 344 380 380 TRP TRP B . n A 1 345 PHE 345 381 381 PHE PHE B . n A 1 346 PRO 346 382 382 PRO PRO B . n A 1 347 GLY 347 383 383 GLY GLY B . n A 1 348 TYR 348 384 384 TYR TYR B . n A 1 349 ALA 349 385 385 ALA ALA B . n A 1 350 TRP 350 386 386 TRP TRP B . n A 1 351 THR 351 387 387 THR THR B . n A 1 352 VAL 352 388 388 VAL VAL B . n A 1 353 ALA 353 389 389 ALA ALA B . n A 1 354 GLN 354 390 390 GLN GLN B . n A 1 355 CYS 355 391 391 CYS CYS B . n A 1 356 LYS 356 392 392 LYS LYS B . n A 1 357 ILE 357 393 393 ILE ILE B . n A 1 358 CYS 358 394 394 CYS CYS B . n A 1 359 ALA 359 395 395 ALA ALA B . n A 1 360 SER 360 396 396 SER SER B . n A 1 361 HIS 361 397 397 HIS HIS B . n A 1 362 ILE 362 398 398 ILE ILE B . n A 1 363 GLY 363 399 399 GLY GLY B . n A 1 364 TRP 364 400 400 TRP TRP B . n A 1 365 LYS 365 401 401 LYS LYS B . n A 1 366 PHE 366 402 402 PHE PHE B . n A 1 367 THR 367 403 403 THR THR B . n A 1 368 ALA 368 404 404 ALA ALA B . n A 1 369 THR 369 405 405 THR THR B . n A 1 370 LYS 370 406 406 LYS LYS B . n A 1 371 LYS 371 407 407 LYS LYS B . n A 1 372 ASP 372 408 408 ASP ASP B . n A 1 373 MET 373 409 409 MET MET B . n A 1 374 SER 374 410 410 SER SER B . n A 1 375 PRO 375 411 411 PRO PRO B . n A 1 376 GLN 376 412 412 GLN GLN B . n A 1 377 LYS 377 413 413 LYS LYS B . n A 1 378 PHE 378 414 414 PHE PHE B . n A 1 379 TRP 379 415 415 TRP TRP B . n A 1 380 GLY 380 416 416 GLY GLY B . n A 1 381 LEU 381 417 417 LEU LEU B . n A 1 382 THR 382 418 418 THR THR B . n A 1 383 ARG 383 419 419 ARG ARG B . n A 1 384 SER 384 420 420 SER SER B . n A 1 385 ALA 385 421 421 ALA ALA B . n A 1 386 LEU 386 422 422 LEU LEU B . n A 1 387 LEU 387 423 423 LEU LEU B . n A 1 388 PRO 388 424 424 PRO PRO B . n A 1 389 THR 389 425 425 THR THR B . n A 1 390 ILE 390 426 426 ILE ILE B . n A 1 391 PRO 391 427 427 PRO PRO B . n A 1 392 ASP 392 428 ? ? ? B . n A 1 393 THR 393 429 ? ? ? B . n A 1 394 GLU 394 430 ? ? ? B . n A 1 395 ASP 395 431 ? ? ? B . n A 1 396 GLU 396 432 ? ? ? B . n A 1 397 ILE 397 433 ? ? ? B . n A 1 398 SER 398 434 ? ? ? B . n A 1 399 PRO 399 435 ? ? ? B . n A 1 400 ASP 400 436 ? ? ? B . n A 1 401 LYS 401 437 ? ? ? B . n A 1 402 VAL 402 438 ? ? ? B . n A 1 403 ILE 403 439 ? ? ? B . n A 1 404 LEU 404 440 ? ? ? B . n A 1 405 CYS 405 441 ? ? ? B . n A 1 406 LEU 406 442 ? ? ? B . n B 2 1 GLY 1 82 ? ? ? C . n B 2 2 ARG 2 83 ? ? ? C . n B 2 3 MET 3 84 ? ? ? C . n B 2 4 LEU 4 85 ? ? ? C . n B 2 5 ASP 5 86 ? ? ? C . n B 2 6 ALA 6 87 ? ? ? C . n B 2 7 SER 7 88 ? ? ? C . n B 2 8 GLY 8 89 ? ? ? C . n B 2 9 GLU 9 90 ? ? ? C . n B 2 10 LYS 10 91 ? ? ? C . n B 2 11 MET 11 92 ? ? ? C . n B 2 12 ASN 12 93 ? ? ? C . n B 2 13 GLY 13 94 ? ? ? C . n B 2 14 SER 14 95 ? ? ? C . n B 2 15 HIS 15 96 ? ? ? C . n B 2 16 ARG 16 97 ? ? ? C . n B 2 17 ASP 17 98 ? ? ? C . n B 2 18 GLN 18 99 ? ? ? C . n B 2 19 GLY 19 100 ? ? ? C . n B 2 20 SER 20 101 ? ? ? C . n B 2 21 SER 21 102 ? ? ? C . n B 2 22 ALA 22 103 ? ? ? C . n B 2 23 LEU 23 104 ? ? ? C . n B 2 24 SER 24 105 ? ? ? C . n B 2 25 GLY 25 106 ? ? ? C . n B 2 26 VAL 26 107 ? ? ? C . n B 2 27 GLY 27 108 ? ? ? C . n B 2 28 GLY 28 109 ? ? ? C . n B 2 29 ILE 29 110 ? ? ? C . n B 2 30 ARG 30 111 ? ? ? C . n B 2 31 LEU 31 112 ? ? ? C . n B 2 32 PRO 32 113 ? ? ? C . n B 2 33 ASN 33 114 ? ? ? C . n B 2 34 GLY 34 115 ? ? ? C . n B 2 35 LYS 35 116 ? ? ? C . n B 2 36 LEU 36 117 ? ? ? C . n B 2 37 LYS 37 118 ? ? ? C . n B 2 38 CYS 38 119 ? ? ? C . n B 2 39 ASP 39 120 ? ? ? C . n B 2 40 ILE 40 121 ? ? ? C . n B 2 41 CYS 41 122 ? ? ? C . n B 2 42 GLY 42 123 ? ? ? C . n B 2 43 ILE 43 124 ? ? ? C . n B 2 44 ILE 44 125 ? ? ? C . n B 2 45 CYS 45 126 ? ? ? C . n B 2 46 ILE 46 127 ? ? ? C . n B 2 47 GLY 47 128 ? ? ? C . n B 2 48 PRO 48 129 ? ? ? C . n B 2 49 ASN 49 130 ? ? ? C . n B 2 50 VAL 50 131 ? ? ? C . n B 2 51 LEU 51 132 ? ? ? C . n B 2 52 MET 52 133 ? ? ? C . n B 2 53 VAL 53 134 ? ? ? C . n B 2 54 HIS 54 135 ? ? ? C . n B 2 55 LYS 55 136 ? ? ? C . n B 2 56 ARG 56 137 ? ? ? C . n B 2 57 SER 57 138 ? ? ? C . n B 2 58 HIS 58 139 ? ? ? C . n B 2 59 THR 59 140 ? ? ? C . n B 2 60 GLY 60 141 ? ? ? C . n B 2 61 GLU 61 142 ? ? ? C . n B 2 62 ARG 62 143 ? ? ? C . n B 2 63 PRO 63 144 144 PRO PRO C . n B 2 64 PHE 64 145 145 PHE PHE C . n B 2 65 GLN 65 146 146 GLN GLN C . n B 2 66 CYS 66 147 147 CYS CYS C . n B 2 67 ASN 67 148 148 ASN ASN C . n B 2 68 GLN 68 149 149 GLN GLN C . n B 2 69 CYS 69 150 150 CYS CYS C . n B 2 70 GLY 70 151 151 GLY GLY C . n B 2 71 ALA 71 152 152 ALA ALA C . n B 2 72 SER 72 153 153 SER SER C . n B 2 73 PHE 73 154 154 PHE PHE C . n B 2 74 THR 74 155 155 THR THR C . n B 2 75 GLN 75 156 156 GLN GLN C . n B 2 76 LYS 76 157 157 LYS LYS C . n B 2 77 GLY 77 158 158 GLY GLY C . n B 2 78 ASN 78 159 159 ASN ASN C . n B 2 79 LEU 79 160 160 LEU LEU C . n B 2 80 LEU 80 161 161 LEU LEU C . n B 2 81 ARG 81 162 162 ARG ARG C . n B 2 82 HIS 82 163 163 HIS HIS C . n B 2 83 ILE 83 164 164 ILE ILE C . n B 2 84 LYS 84 165 165 LYS LYS C . n B 2 85 LEU 85 166 166 LEU LEU C . n B 2 86 HIS 86 167 167 HIS HIS C . n B 2 87 SER 87 168 168 SER SER C . n B 2 88 GLY 88 169 169 GLY GLY C . n B 2 89 GLU 89 170 ? ? ? C . n B 2 90 LYS 90 171 ? ? ? C . n B 2 91 PRO 91 172 ? ? ? C . n B 2 92 PHE 92 173 ? ? ? C . n B 2 93 LYS 93 174 ? ? ? C . n B 2 94 CYS 94 175 ? ? ? C . n B 2 95 HIS 95 176 ? ? ? C . n B 2 96 LEU 96 177 ? ? ? C . n B 2 97 CYS 97 178 ? ? ? C . n B 2 98 ASN 98 179 ? ? ? C . n B 2 99 TYR 99 180 ? ? ? C . n B 2 100 ALA 100 181 ? ? ? C . n B 2 101 CYS 101 182 ? ? ? C . n B 2 102 ARG 102 183 ? ? ? C . n B 2 103 ARG 103 184 ? ? ? C . n B 2 104 ARG 104 185 ? ? ? C . n B 2 105 ASP 105 186 ? ? ? C . n B 2 106 ALA 106 187 ? ? ? C . n B 2 107 LEU 107 188 ? ? ? C . n B 2 108 THR 108 189 ? ? ? C . n B 2 109 GLY 109 190 ? ? ? C . n B 2 110 HIS 110 191 ? ? ? C . n B 2 111 LEU 111 192 ? ? ? C . n B 2 112 ARG 112 193 ? ? ? C . n B 2 113 THR 113 194 ? ? ? C . n B 2 114 HIS 114 195 ? ? ? C . n B 2 115 SER 115 196 ? ? ? C . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1AF4 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1AF4 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 501 501 ZN ZN B . D 4 A1AF4 1 502 502 A1AF4 A1AF4 B . E 3 ZN 1 201 201 ZN ZN C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ASP 63 ? CG ? A ASP 27 CG 2 1 Y 1 B ASP 63 ? OD1 ? A ASP 27 OD1 3 1 Y 1 B ASP 63 ? OD2 ? A ASP 27 OD2 4 1 Y 1 B GLU 65 ? CG ? A GLU 29 CG 5 1 Y 1 B GLU 65 ? CD ? A GLU 29 CD 6 1 Y 1 B GLU 65 ? OE1 ? A GLU 29 OE1 7 1 Y 1 B GLU 65 ? OE2 ? A GLU 29 OE2 8 1 Y 1 B GLU 66 ? CG ? A GLU 30 CG 9 1 Y 1 B GLU 66 ? CD ? A GLU 30 CD 10 1 Y 1 B GLU 66 ? OE1 ? A GLU 30 OE1 11 1 Y 1 B GLU 66 ? OE2 ? A GLU 30 OE2 12 1 Y 1 B HIS 68 ? CG ? A HIS 32 CG 13 1 Y 1 B HIS 68 ? ND1 ? A HIS 32 ND1 14 1 Y 1 B HIS 68 ? CD2 ? A HIS 32 CD2 15 1 Y 1 B HIS 68 ? CE1 ? A HIS 32 CE1 16 1 Y 1 B HIS 68 ? NE2 ? A HIS 32 NE2 17 1 Y 1 B ASP 75 ? CG ? A ASP 39 CG 18 1 Y 1 B ASP 75 ? OD1 ? A ASP 39 OD1 19 1 Y 1 B ASP 75 ? OD2 ? A ASP 39 OD2 20 1 Y 1 B ASP 76 ? CG ? A ASP 40 CG 21 1 Y 1 B ASP 76 ? OD1 ? A ASP 40 OD1 22 1 Y 1 B ASP 76 ? OD2 ? A ASP 40 OD2 23 1 Y 1 B MET 88 ? CG ? A MET 52 CG 24 1 Y 1 B MET 88 ? SD ? A MET 52 SD 25 1 Y 1 B MET 88 ? CE ? A MET 52 CE 26 1 Y 1 B MET 109 ? CG ? A MET 73 CG 27 1 Y 1 B MET 109 ? SD ? A MET 73 SD 28 1 Y 1 B MET 109 ? CE ? A MET 73 CE 29 1 Y 1 B LYS 116 ? CG ? A LYS 80 CG 30 1 Y 1 B LYS 116 ? CD ? A LYS 80 CD 31 1 Y 1 B LYS 116 ? CE ? A LYS 80 CE 32 1 Y 1 B LYS 116 ? NZ ? A LYS 80 NZ 33 1 Y 1 B ASN 127 ? CG ? A ASN 91 CG 34 1 Y 1 B ASN 127 ? OD1 ? A ASN 91 OD1 35 1 Y 1 B ASN 127 ? ND2 ? A ASN 91 ND2 36 1 Y 1 B VAL 128 ? CG1 ? A VAL 92 CG1 37 1 Y 1 B VAL 128 ? CG2 ? A VAL 92 CG2 38 1 Y 1 B GLN 129 ? CG ? A GLN 93 CG 39 1 Y 1 B GLN 129 ? CD ? A GLN 93 CD 40 1 Y 1 B GLN 129 ? OE1 ? A GLN 93 OE1 41 1 Y 1 B GLN 129 ? NE2 ? A GLN 93 NE2 42 1 Y 1 B GLU 130 ? CG ? A GLU 94 CG 43 1 Y 1 B GLU 130 ? CD ? A GLU 94 CD 44 1 Y 1 B GLU 130 ? OE1 ? A GLU 94 OE1 45 1 Y 1 B GLU 130 ? OE2 ? A GLU 94 OE2 46 1 Y 1 B ARG 131 ? CG ? A ARG 95 CG 47 1 Y 1 B ARG 131 ? CD ? A ARG 95 CD 48 1 Y 1 B ARG 131 ? NE ? A ARG 95 NE 49 1 Y 1 B ARG 131 ? CZ ? A ARG 95 CZ 50 1 Y 1 B ARG 131 ? NH1 ? A ARG 95 NH1 51 1 Y 1 B ARG 131 ? NH2 ? A ARG 95 NH2 52 1 Y 1 B GLU 132 ? CG ? A GLU 96 CG 53 1 Y 1 B GLU 132 ? CD ? A GLU 96 CD 54 1 Y 1 B GLU 132 ? OE1 ? A GLU 96 OE1 55 1 Y 1 B GLU 132 ? OE2 ? A GLU 96 OE2 56 1 Y 1 B GLU 147 ? CG ? A GLU 111 CG 57 1 Y 1 B GLU 147 ? CD ? A GLU 111 CD 58 1 Y 1 B GLU 147 ? OE1 ? A GLU 111 OE1 59 1 Y 1 B GLU 147 ? OE2 ? A GLU 111 OE2 60 1 Y 1 B ASP 149 ? CG ? A ASP 113 CG 61 1 Y 1 B ASP 149 ? OD1 ? A ASP 113 OD1 62 1 Y 1 B ASP 149 ? OD2 ? A ASP 113 OD2 63 1 Y 1 B PHE 150 ? CG ? A PHE 114 CG 64 1 Y 1 B PHE 150 ? CD1 ? A PHE 114 CD1 65 1 Y 1 B PHE 150 ? CD2 ? A PHE 114 CD2 66 1 Y 1 B PHE 150 ? CE1 ? A PHE 114 CE1 67 1 Y 1 B PHE 150 ? CE2 ? A PHE 114 CE2 68 1 Y 1 B PHE 150 ? CZ ? A PHE 114 CZ 69 1 Y 1 B LYS 166 ? CG ? A LYS 130 CG 70 1 Y 1 B LYS 166 ? CD ? A LYS 130 CD 71 1 Y 1 B LYS 166 ? CE ? A LYS 130 CE 72 1 Y 1 B LYS 166 ? NZ ? A LYS 130 NZ 73 1 Y 1 B GLU 216 ? CG ? A GLU 180 CG 74 1 Y 1 B GLU 216 ? CD ? A GLU 180 CD 75 1 Y 1 B GLU 216 ? OE1 ? A GLU 180 OE1 76 1 Y 1 B GLU 216 ? OE2 ? A GLU 180 OE2 77 1 Y 1 B ASN 267 ? CG ? A ASN 231 CG 78 1 Y 1 B ASN 267 ? OD1 ? A ASN 231 OD1 79 1 Y 1 B ASN 267 ? ND2 ? A ASN 231 ND2 80 1 Y 1 B LYS 269 ? CG ? A LYS 233 CG 81 1 Y 1 B LYS 269 ? CD ? A LYS 233 CD 82 1 Y 1 B LYS 269 ? CE ? A LYS 233 CE 83 1 Y 1 B LYS 269 ? NZ ? A LYS 233 NZ 84 1 Y 1 B LYS 317 ? CG ? A LYS 281 CG 85 1 Y 1 B LYS 317 ? CD ? A LYS 281 CD 86 1 Y 1 B LYS 317 ? CE ? A LYS 281 CE 87 1 Y 1 B LYS 317 ? NZ ? A LYS 281 NZ 88 1 Y 1 B GLN 325 ? CG ? A GLN 289 CG 89 1 Y 1 B GLN 325 ? CD ? A GLN 289 CD 90 1 Y 1 B GLN 325 ? OE1 ? A GLN 289 OE1 91 1 Y 1 B GLN 325 ? NE2 ? A GLN 289 NE2 92 1 Y 1 B GLN 327 ? CG ? A GLN 291 CG 93 1 Y 1 B GLN 327 ? CD ? A GLN 291 CD 94 1 Y 1 B GLN 327 ? OE1 ? A GLN 291 OE1 95 1 Y 1 B GLN 327 ? NE2 ? A GLN 291 NE2 96 1 Y 1 B GLU 328 ? CG ? A GLU 292 CG 97 1 Y 1 B GLU 328 ? CD ? A GLU 292 CD 98 1 Y 1 B GLU 328 ? OE1 ? A GLU 292 OE1 99 1 Y 1 B GLU 328 ? OE2 ? A GLU 292 OE2 100 1 Y 1 B LYS 364 ? CG ? A LYS 328 CG 101 1 Y 1 B LYS 364 ? CD ? A LYS 328 CD 102 1 Y 1 B LYS 364 ? CE ? A LYS 328 CE 103 1 Y 1 B LYS 364 ? NZ ? A LYS 328 NZ 104 1 Y 1 B LYS 392 ? CG ? A LYS 356 CG 105 1 Y 1 B LYS 392 ? CD ? A LYS 356 CD 106 1 Y 1 B LYS 392 ? CE ? A LYS 356 CE 107 1 Y 1 B LYS 392 ? NZ ? A LYS 356 NZ 108 1 Y 1 B LYS 413 ? CG ? A LYS 377 CG 109 1 Y 1 B LYS 413 ? CD ? A LYS 377 CD 110 1 Y 1 B LYS 413 ? CE ? A LYS 377 CE 111 1 Y 1 B LYS 413 ? NZ ? A LYS 377 NZ 112 1 Y 1 C PHE 154 ? CG ? B PHE 73 CG 113 1 Y 1 C PHE 154 ? CD1 ? B PHE 73 CD1 114 1 Y 1 C PHE 154 ? CD2 ? B PHE 73 CD2 115 1 Y 1 C PHE 154 ? CE1 ? B PHE 73 CE1 116 1 Y 1 C PHE 154 ? CE2 ? B PHE 73 CE2 117 1 Y 1 C PHE 154 ? CZ ? B PHE 73 CZ # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9Y7D _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9Y7D _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9Y7D _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9Y7D _struct.title 'Cereblon with Golcadomide and Ikaros ZF1-2-3' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9Y7D _struct_keywords.text 'Liganded Cereblon Ligase Substrate, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP CRBN_HUMAN Q96SW2 ? 1 ;EAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRT FAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQL ESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPID FSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVHET LTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPDKVI LCL ; 40 2 UNP IKZF1_HUMAN Q13422 ? 2 ;RMLDASGEKMNGSHRDQGSSALSGVGGIRLPNGKLKCDICGIICIGPNVLMVHKRSHTGERPFQCNQCGASFTQKGNLLR HIKLHSGEKPFKCHLCNYACRRRDALTGHLRTHS ; 83 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9Y7D B 4 ? 406 ? Q96SW2 40 ? 442 ? 40 442 2 2 9Y7D C 2 ? 115 ? Q13422 83 ? 196 ? 83 196 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9Y7D GLY B 1 ? UNP Q96SW2 ? ? 'expression tag' 37 1 1 9Y7D SER B 2 ? UNP Q96SW2 ? ? 'expression tag' 38 2 1 9Y7D MET B 3 ? UNP Q96SW2 ? ? 'expression tag' 39 3 2 9Y7D GLY C 1 ? UNP Q13422 ? ? 'expression tag' 82 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 67 ? LYS A 80 ? HIS B 103 LYS B 116 1 ? 14 HELX_P HELX_P2 AA2 SER A 184 ? PHE A 196 ? SER B 220 PHE B 232 1 ? 13 HELX_P HELX_P3 AA3 HIS A 197 ? LEU A 201 ? HIS B 233 LEU B 237 5 ? 5 HELX_P HELX_P4 AA4 PRO A 205 ? TYR A 212 ? PRO B 241 TYR B 248 1 ? 8 HELX_P HELX_P5 AA5 ASP A 213 ? ARG A 226 ? ASP B 249 ARG B 262 1 ? 14 HELX_P HELX_P6 AA6 ASN A 240 ? ALA A 250 ? ASN B 276 ALA B 286 1 ? 11 HELX_P HELX_P7 AA7 ASP A 255 ? ILE A 265 ? ASP B 291 ILE B 301 1 ? 11 HELX_P HELX_P8 AA8 SER A 267 ? LYS A 281 ? SER B 303 LYS B 317 1 ? 15 HELX_P HELX_P9 AA9 THR A 293 ? THR A 297 ? THR B 329 THR B 333 5 ? 5 HELX_P HELX_P10 AB1 GLN B 75 ? GLY B 88 ? GLN C 156 GLY C 169 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 287 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 323 B ZN 501 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc2 metalc ? ? A CYS 290 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 326 B ZN 501 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc3 metalc ? ? A CYS 355 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 391 B ZN 501 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc4 metalc ? ? A CYS 358 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 394 B ZN 501 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc5 metalc ? ? B CYS 66 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 147 C ZN 201 1_555 ? ? ? ? ? ? ? 2.293 ? ? metalc6 metalc ? ? B CYS 69 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 150 C ZN 201 1_555 ? ? ? ? ? ? ? 1.936 ? ? metalc7 metalc ? ? B HIS 82 NE2 ? ? ? 1_555 E ZN . ZN ? ? C HIS 163 C ZN 201 1_555 ? ? ? ? ? ? ? 2.508 ? ? metalc8 metalc ? ? B HIS 86 NE2 ? ? ? 1_555 E ZN . ZN ? ? C HIS 167 C ZN 201 1_555 ? ? ? ? ? ? ? 2.254 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 287 ? B CYS 323 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 290 ? B CYS 326 ? 1_555 110.4 ? 2 SG ? A CYS 287 ? B CYS 323 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 355 ? B CYS 391 ? 1_555 112.5 ? 3 SG ? A CYS 290 ? B CYS 326 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 355 ? B CYS 391 ? 1_555 112.2 ? 4 SG ? A CYS 287 ? B CYS 323 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 358 ? B CYS 394 ? 1_555 107.3 ? 5 SG ? A CYS 290 ? B CYS 326 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 358 ? B CYS 394 ? 1_555 107.3 ? 6 SG ? A CYS 355 ? B CYS 391 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 358 ? B CYS 394 ? 1_555 106.7 ? 7 SG ? B CYS 66 ? C CYS 147 ? 1_555 ZN ? E ZN . ? C ZN 201 ? 1_555 SG ? B CYS 69 ? C CYS 150 ? 1_555 127.4 ? 8 SG ? B CYS 66 ? C CYS 147 ? 1_555 ZN ? E ZN . ? C ZN 201 ? 1_555 NE2 ? B HIS 82 ? C HIS 163 ? 1_555 96.1 ? 9 SG ? B CYS 69 ? C CYS 150 ? 1_555 ZN ? E ZN . ? C ZN 201 ? 1_555 NE2 ? B HIS 82 ? C HIS 163 ? 1_555 105.0 ? 10 SG ? B CYS 66 ? C CYS 147 ? 1_555 ZN ? E ZN . ? C ZN 201 ? 1_555 NE2 ? B HIS 86 ? C HIS 167 ? 1_555 118.9 ? 11 SG ? B CYS 69 ? C CYS 150 ? 1_555 ZN ? E ZN . ? C ZN 201 ? 1_555 NE2 ? B HIS 86 ? C HIS 167 ? 1_555 107.3 ? 12 NE2 ? B HIS 82 ? C HIS 163 ? 1_555 ZN ? E ZN . ? C ZN 201 ? 1_555 NE2 ? B HIS 86 ? C HIS 167 ? 1_555 93.7 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 42 ? VAL A 44 ? CYS B 78 VAL B 80 AA1 2 LYS A 145 ? ILE A 148 ? LYS B 181 ILE B 184 AA1 3 VAL A 119 ? GLU A 133 ? VAL B 155 GLU B 169 AA1 4 THR A 60 ? LEU A 65 ? THR B 96 LEU B 101 AA2 1 CYS A 42 ? VAL A 44 ? CYS B 78 VAL B 80 AA2 2 LYS A 145 ? ILE A 148 ? LYS B 181 ILE B 184 AA2 3 VAL A 119 ? GLU A 133 ? VAL B 155 GLU B 169 AA2 4 ALA A 97 ? GLU A 110 ? ALA B 133 GLU B 146 AA2 5 THR A 83 ? TYR A 89 ? THR B 119 TYR B 125 AA3 1 CYS A 286 ? CYS A 287 ? CYS B 322 CYS B 323 AA3 2 LEU A 386 ? LEU A 387 ? LEU B 422 LEU B 423 AA4 1 MET A 310 ? ALA A 311 ? MET B 346 ALA B 347 AA4 2 THR A 323 ? VAL A 326 ? THR B 359 VAL B 362 AA4 3 TRP A 379 ? THR A 382 ? TRP B 415 THR B 418 AA4 4 TRP A 364 ? LYS A 365 ? TRP B 400 LYS B 401 AA5 1 LEU A 332 ? LEU A 334 ? LEU B 368 LEU B 370 AA5 2 ALA A 353 ? CYS A 355 ? ALA B 389 CYS B 391 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 43 ? N GLN B 79 O VAL A 146 ? O VAL B 182 AA1 2 3 O LYS A 145 ? O LYS B 181 N LEU A 132 ? N LEU B 168 AA1 3 4 O VAL A 121 ? O VAL B 157 N LEU A 63 ? N LEU B 99 AA2 1 2 N GLN A 43 ? N GLN B 79 O VAL A 146 ? O VAL B 182 AA2 2 3 O LYS A 145 ? O LYS B 181 N LEU A 132 ? N LEU B 168 AA2 3 4 O ARG A 126 ? O ARG B 162 N THR A 102 ? N THR B 138 AA2 4 5 O THR A 101 ? O THR B 137 N VAL A 86 ? N VAL B 122 AA3 1 2 N CYS A 286 ? N CYS B 322 O LEU A 387 ? O LEU B 423 AA4 1 2 N ALA A 311 ? N ALA B 347 O THR A 323 ? O THR B 359 AA4 2 3 N LEU A 324 ? N LEU B 360 O LEU A 381 ? O LEU B 417 AA4 3 4 O GLY A 380 ? O GLY B 416 N TRP A 364 ? N TRP B 400 AA5 1 2 N ASN A 333 ? N ASN B 369 O GLN A 354 ? O GLN B 390 # _pdbx_entry_details.entry_id 9Y7D _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO B 54 ? ? -80.12 43.19 2 1 THR B 55 ? ? -141.08 -7.31 3 1 ASP B 75 ? ? 50.57 -119.54 4 1 SER B 126 ? ? -79.32 -167.30 5 1 ASP B 149 ? ? 62.48 -137.43 6 1 ILE B 152 ? ? -120.62 -84.40 7 1 GLU B 153 ? ? -163.78 24.98 8 1 VAL B 213 ? ? 56.37 -131.62 9 1 SER B 214 ? ? -172.55 139.95 10 1 PHE B 232 ? ? -93.39 51.00 11 1 SER B 272 ? ? 62.20 -102.25 12 1 LYS B 324 ? ? -100.11 42.73 13 1 VAL B 388 ? ? 44.27 104.29 14 1 ILE B 393 ? ? -122.27 -60.89 15 1 LYS B 413 ? ? 64.49 -146.92 16 1 PRO B 424 ? ? -66.87 73.28 17 1 THR B 425 ? ? -61.91 44.72 18 1 CYS C 147 ? ? -123.07 -156.78 19 1 GLN C 149 ? ? 57.23 -27.42 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9Y7D _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9Y7D _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.26 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 170954 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Cereblon with Golcadomide with Ikaros ZF1-2-3' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_imaging.entry_id 9Y7D _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 0 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9Y7D _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name NITROGEN _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9Y7D _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLY 37 ? A GLY 1 2 1 Y 1 B SER 38 ? A SER 2 3 1 Y 1 B MET 39 ? A MET 3 4 1 Y 1 B GLU 40 ? A GLU 4 5 1 Y 1 B ALA 41 ? A ALA 5 6 1 Y 1 B LYS 42 ? A LYS 6 7 1 Y 1 B LYS 43 ? A LYS 7 8 1 Y 1 B PRO 44 ? A PRO 8 9 1 Y 1 B ASN 45 ? A ASN 9 10 1 Y 1 B ILE 46 ? A ILE 10 11 1 Y 1 B ILE 47 ? A ILE 11 12 1 Y 1 B ASN 48 ? A ASN 12 13 1 Y 1 B ASP 428 ? A ASP 392 14 1 Y 1 B THR 429 ? A THR 393 15 1 Y 1 B GLU 430 ? A GLU 394 16 1 Y 1 B ASP 431 ? A ASP 395 17 1 Y 1 B GLU 432 ? A GLU 396 18 1 Y 1 B ILE 433 ? A ILE 397 19 1 Y 1 B SER 434 ? A SER 398 20 1 Y 1 B PRO 435 ? A PRO 399 21 1 Y 1 B ASP 436 ? A ASP 400 22 1 Y 1 B LYS 437 ? A LYS 401 23 1 Y 1 B VAL 438 ? A VAL 402 24 1 Y 1 B ILE 439 ? A ILE 403 25 1 Y 1 B LEU 440 ? A LEU 404 26 1 Y 1 B CYS 441 ? A CYS 405 27 1 Y 1 B LEU 442 ? A LEU 406 28 1 Y 1 C GLY 82 ? B GLY 1 29 1 Y 1 C ARG 83 ? B ARG 2 30 1 Y 1 C MET 84 ? B MET 3 31 1 Y 1 C LEU 85 ? B LEU 4 32 1 Y 1 C ASP 86 ? B ASP 5 33 1 Y 1 C ALA 87 ? B ALA 6 34 1 Y 1 C SER 88 ? B SER 7 35 1 Y 1 C GLY 89 ? B GLY 8 36 1 Y 1 C GLU 90 ? B GLU 9 37 1 Y 1 C LYS 91 ? B LYS 10 38 1 Y 1 C MET 92 ? B MET 11 39 1 Y 1 C ASN 93 ? B ASN 12 40 1 Y 1 C GLY 94 ? B GLY 13 41 1 Y 1 C SER 95 ? B SER 14 42 1 Y 1 C HIS 96 ? B HIS 15 43 1 Y 1 C ARG 97 ? B ARG 16 44 1 Y 1 C ASP 98 ? B ASP 17 45 1 Y 1 C GLN 99 ? B GLN 18 46 1 Y 1 C GLY 100 ? B GLY 19 47 1 Y 1 C SER 101 ? B SER 20 48 1 Y 1 C SER 102 ? B SER 21 49 1 Y 1 C ALA 103 ? B ALA 22 50 1 Y 1 C LEU 104 ? B LEU 23 51 1 Y 1 C SER 105 ? B SER 24 52 1 Y 1 C GLY 106 ? B GLY 25 53 1 Y 1 C VAL 107 ? B VAL 26 54 1 Y 1 C GLY 108 ? B GLY 27 55 1 Y 1 C GLY 109 ? B GLY 28 56 1 Y 1 C ILE 110 ? B ILE 29 57 1 Y 1 C ARG 111 ? B ARG 30 58 1 Y 1 C LEU 112 ? B LEU 31 59 1 Y 1 C PRO 113 ? B PRO 32 60 1 Y 1 C ASN 114 ? B ASN 33 61 1 Y 1 C GLY 115 ? B GLY 34 62 1 Y 1 C LYS 116 ? B LYS 35 63 1 Y 1 C LEU 117 ? B LEU 36 64 1 Y 1 C LYS 118 ? B LYS 37 65 1 Y 1 C CYS 119 ? B CYS 38 66 1 Y 1 C ASP 120 ? B ASP 39 67 1 Y 1 C ILE 121 ? B ILE 40 68 1 Y 1 C CYS 122 ? B CYS 41 69 1 Y 1 C GLY 123 ? B GLY 42 70 1 Y 1 C ILE 124 ? B ILE 43 71 1 Y 1 C ILE 125 ? B ILE 44 72 1 Y 1 C CYS 126 ? B CYS 45 73 1 Y 1 C ILE 127 ? B ILE 46 74 1 Y 1 C GLY 128 ? B GLY 47 75 1 Y 1 C PRO 129 ? B PRO 48 76 1 Y 1 C ASN 130 ? B ASN 49 77 1 Y 1 C VAL 131 ? B VAL 50 78 1 Y 1 C LEU 132 ? B LEU 51 79 1 Y 1 C MET 133 ? B MET 52 80 1 Y 1 C VAL 134 ? B VAL 53 81 1 Y 1 C HIS 135 ? B HIS 54 82 1 Y 1 C LYS 136 ? B LYS 55 83 1 Y 1 C ARG 137 ? B ARG 56 84 1 Y 1 C SER 138 ? B SER 57 85 1 Y 1 C HIS 139 ? B HIS 58 86 1 Y 1 C THR 140 ? B THR 59 87 1 Y 1 C GLY 141 ? B GLY 60 88 1 Y 1 C GLU 142 ? B GLU 61 89 1 Y 1 C ARG 143 ? B ARG 62 90 1 Y 1 C GLU 170 ? B GLU 89 91 1 Y 1 C LYS 171 ? B LYS 90 92 1 Y 1 C PRO 172 ? B PRO 91 93 1 Y 1 C PHE 173 ? B PHE 92 94 1 Y 1 C LYS 174 ? B LYS 93 95 1 Y 1 C CYS 175 ? B CYS 94 96 1 Y 1 C HIS 176 ? B HIS 95 97 1 Y 1 C LEU 177 ? B LEU 96 98 1 Y 1 C CYS 178 ? B CYS 97 99 1 Y 1 C ASN 179 ? B ASN 98 100 1 Y 1 C TYR 180 ? B TYR 99 101 1 Y 1 C ALA 181 ? B ALA 100 102 1 Y 1 C CYS 182 ? B CYS 101 103 1 Y 1 C ARG 183 ? B ARG 102 104 1 Y 1 C ARG 184 ? B ARG 103 105 1 Y 1 C ARG 185 ? B ARG 104 106 1 Y 1 C ASP 186 ? B ASP 105 107 1 Y 1 C ALA 187 ? B ALA 106 108 1 Y 1 C LEU 188 ? B LEU 107 109 1 Y 1 C THR 189 ? B THR 108 110 1 Y 1 C GLY 190 ? B GLY 109 111 1 Y 1 C HIS 191 ? B HIS 110 112 1 Y 1 C LEU 192 ? B LEU 111 113 1 Y 1 C ARG 193 ? B ARG 112 114 1 Y 1 C THR 194 ? B THR 113 115 1 Y 1 C HIS 195 ? B HIS 114 116 1 Y 1 C SER 196 ? B SER 115 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1AF4 N1 N N N 1 A1AF4 C7 C N N 2 A1AF4 C8 C N N 3 A1AF4 N2 N N N 4 A1AF4 C9 C N N 5 A1AF4 O1 O N N 6 A1AF4 C1 C Y N 7 A1AF4 C5 C N N 8 A1AF4 C6 C N N 9 A1AF4 N3 N N N 10 A1AF4 C4 C Y N 11 A1AF4 O4 O N N 12 A1AF4 C3 C Y N 13 A1AF4 O3 O N N 14 A1AF4 C2 C Y N 15 A1AF4 N4 N N N 16 A1AF4 N N N N 17 A1AF4 C C Y N 18 A1AF4 O O N N 19 A1AF4 O2 O N N 20 A1AF4 C10 C N N 21 A1AF4 C11 C N N 22 A1AF4 C12 C N N 23 A1AF4 C13 C Y N 24 A1AF4 C14 C N N 25 A1AF4 C15 C Y N 26 A1AF4 C16 C Y N 27 A1AF4 C17 C Y N 28 A1AF4 C18 C N N 29 A1AF4 C19 C N S 30 A1AF4 C20 C N N 31 A1AF4 C21 C N N 32 A1AF4 C22 C N N 33 A1AF4 C23 C N N 34 A1AF4 C24 C N N 35 A1AF4 C25 C Y N 36 A1AF4 C26 C Y N 37 A1AF4 C27 C Y N 38 A1AF4 F F N N 39 A1AF4 H2 H N N 40 A1AF4 H3 H N N 41 A1AF4 H4 H N N 42 A1AF4 H5 H N N 43 A1AF4 H6 H N N 44 A1AF4 H7 H N N 45 A1AF4 H8 H N N 46 A1AF4 H9 H N N 47 A1AF4 H10 H N N 48 A1AF4 H11 H N N 49 A1AF4 H12 H N N 50 A1AF4 H13 H N N 51 A1AF4 H14 H N N 52 A1AF4 H15 H N N 53 A1AF4 H17 H N N 54 A1AF4 H18 H N N 55 A1AF4 H19 H N N 56 A1AF4 H20 H N N 57 A1AF4 H21 H N N 58 A1AF4 H22 H N N 59 A1AF4 H23 H N N 60 A1AF4 H24 H N N 61 A1AF4 H25 H N N 62 A1AF4 H26 H N N 63 A1AF4 H27 H N N 64 A1AF4 H28 H N N 65 A1AF4 H29 H N N 66 A1AF4 H30 H N N 67 A1AF4 H31 H N N 68 A1AF4 H32 H N N 69 ALA N N N N 70 ALA CA C N S 71 ALA C C N N 72 ALA O O N N 73 ALA CB C N N 74 ALA OXT O N N 75 ALA H H N N 76 ALA H2 H N N 77 ALA HA H N N 78 ALA HB1 H N N 79 ALA HB2 H N N 80 ALA HB3 H N N 81 ALA HXT H N N 82 ARG N N N N 83 ARG CA C N S 84 ARG C C N N 85 ARG O O N N 86 ARG CB C N N 87 ARG CG C N N 88 ARG CD C N N 89 ARG NE N N N 90 ARG CZ C N N 91 ARG NH1 N N N 92 ARG NH2 N N N 93 ARG OXT O N N 94 ARG H H N N 95 ARG H2 H N N 96 ARG HA H N N 97 ARG HB2 H N N 98 ARG HB3 H N N 99 ARG HG2 H N N 100 ARG HG3 H N N 101 ARG HD2 H N N 102 ARG HD3 H N N 103 ARG HE H N N 104 ARG HH11 H N N 105 ARG HH12 H N N 106 ARG HH21 H N N 107 ARG HH22 H N N 108 ARG HXT H N N 109 ASN N N N N 110 ASN CA C N S 111 ASN C C N N 112 ASN O O N N 113 ASN CB C N N 114 ASN CG C N N 115 ASN OD1 O N N 116 ASN ND2 N N N 117 ASN OXT O N N 118 ASN H H N N 119 ASN H2 H N N 120 ASN HA H N N 121 ASN HB2 H N N 122 ASN HB3 H N N 123 ASN HD21 H N N 124 ASN HD22 H N N 125 ASN HXT H N N 126 ASP N N N N 127 ASP CA C N S 128 ASP C C N N 129 ASP O O N N 130 ASP CB C N N 131 ASP CG C N N 132 ASP OD1 O N N 133 ASP OD2 O N N 134 ASP OXT O N N 135 ASP H H N N 136 ASP H2 H N N 137 ASP HA H N N 138 ASP HB2 H N N 139 ASP HB3 H N N 140 ASP HD2 H N N 141 ASP HXT H N N 142 CYS N N N N 143 CYS CA C N R 144 CYS C C N N 145 CYS O O N N 146 CYS CB C N N 147 CYS SG S N N 148 CYS OXT O N N 149 CYS H H N N 150 CYS H2 H N N 151 CYS HA H N N 152 CYS HB2 H N N 153 CYS HB3 H N N 154 CYS HG H N N 155 CYS HXT H N N 156 GLN N N N N 157 GLN CA C N S 158 GLN C C N N 159 GLN O O N N 160 GLN CB C N N 161 GLN CG C N N 162 GLN CD C N N 163 GLN OE1 O N N 164 GLN NE2 N N N 165 GLN OXT O N N 166 GLN H H N N 167 GLN H2 H N N 168 GLN HA H N N 169 GLN HB2 H N N 170 GLN HB3 H N N 171 GLN HG2 H N N 172 GLN HG3 H N N 173 GLN HE21 H N N 174 GLN HE22 H N N 175 GLN HXT H N N 176 GLU N N N N 177 GLU CA C N S 178 GLU C C N N 179 GLU O O N N 180 GLU CB C N N 181 GLU CG C N N 182 GLU CD C N N 183 GLU OE1 O N N 184 GLU OE2 O N N 185 GLU OXT O N N 186 GLU H H N N 187 GLU H2 H N N 188 GLU HA H N N 189 GLU HB2 H N N 190 GLU HB3 H N N 191 GLU HG2 H N N 192 GLU HG3 H N N 193 GLU HE2 H N N 194 GLU HXT H N N 195 GLY N N N N 196 GLY CA C N N 197 GLY C C N N 198 GLY O O N N 199 GLY OXT O N N 200 GLY H H N N 201 GLY H2 H N N 202 GLY HA2 H N N 203 GLY HA3 H N N 204 GLY HXT H N N 205 HIS N N N N 206 HIS CA C N S 207 HIS C C N N 208 HIS O O N N 209 HIS CB C N N 210 HIS CG C Y N 211 HIS ND1 N Y N 212 HIS CD2 C Y N 213 HIS CE1 C Y N 214 HIS NE2 N Y N 215 HIS OXT O N N 216 HIS H H N N 217 HIS H2 H N N 218 HIS HA H N N 219 HIS HB2 H N N 220 HIS HB3 H N N 221 HIS HD1 H N N 222 HIS HD2 H N N 223 HIS HE1 H N N 224 HIS HE2 H N N 225 HIS HXT H N N 226 ILE N N N N 227 ILE CA C N S 228 ILE C C N N 229 ILE O O N N 230 ILE CB C N S 231 ILE CG1 C N N 232 ILE CG2 C N N 233 ILE CD1 C N N 234 ILE OXT O N N 235 ILE H H N N 236 ILE H2 H N N 237 ILE HA H N N 238 ILE HB H N N 239 ILE HG12 H N N 240 ILE HG13 H N N 241 ILE HG21 H N N 242 ILE HG22 H N N 243 ILE HG23 H N N 244 ILE HD11 H N N 245 ILE HD12 H N N 246 ILE HD13 H N N 247 ILE HXT H N N 248 LEU N N N N 249 LEU CA C N S 250 LEU C C N N 251 LEU O O N N 252 LEU CB C N N 253 LEU CG C N N 254 LEU CD1 C N N 255 LEU CD2 C N N 256 LEU OXT O N N 257 LEU H H N N 258 LEU H2 H N N 259 LEU HA H N N 260 LEU HB2 H N N 261 LEU HB3 H N N 262 LEU HG H N N 263 LEU HD11 H N N 264 LEU HD12 H N N 265 LEU HD13 H N N 266 LEU HD21 H N N 267 LEU HD22 H N N 268 LEU HD23 H N N 269 LEU HXT H N N 270 LYS N N N N 271 LYS CA C N S 272 LYS C C N N 273 LYS O O N N 274 LYS CB C N N 275 LYS CG C N N 276 LYS CD C N N 277 LYS CE C N N 278 LYS NZ N N N 279 LYS OXT O N N 280 LYS H H N N 281 LYS H2 H N N 282 LYS HA H N N 283 LYS HB2 H N N 284 LYS HB3 H N N 285 LYS HG2 H N N 286 LYS HG3 H N N 287 LYS HD2 H N N 288 LYS HD3 H N N 289 LYS HE2 H N N 290 LYS HE3 H N N 291 LYS HZ1 H N N 292 LYS HZ2 H N N 293 LYS HZ3 H N N 294 LYS HXT H N N 295 MET N N N N 296 MET CA C N S 297 MET C C N N 298 MET O O N N 299 MET CB C N N 300 MET CG C N N 301 MET SD S N N 302 MET CE C N N 303 MET OXT O N N 304 MET H H N N 305 MET H2 H N N 306 MET HA H N N 307 MET HB2 H N N 308 MET HB3 H N N 309 MET HG2 H N N 310 MET HG3 H N N 311 MET HE1 H N N 312 MET HE2 H N N 313 MET HE3 H N N 314 MET HXT H N N 315 PHE N N N N 316 PHE CA C N S 317 PHE C C N N 318 PHE O O N N 319 PHE CB C N N 320 PHE CG C Y N 321 PHE CD1 C Y N 322 PHE CD2 C Y N 323 PHE CE1 C Y N 324 PHE CE2 C Y N 325 PHE CZ C Y N 326 PHE OXT O N N 327 PHE H H N N 328 PHE H2 H N N 329 PHE HA H N N 330 PHE HB2 H N N 331 PHE HB3 H N N 332 PHE HD1 H N N 333 PHE HD2 H N N 334 PHE HE1 H N N 335 PHE HE2 H N N 336 PHE HZ H N N 337 PHE HXT H N N 338 PRO N N N N 339 PRO CA C N S 340 PRO C C N N 341 PRO O O N N 342 PRO CB C N N 343 PRO CG C N N 344 PRO CD C N N 345 PRO OXT O N N 346 PRO H H N N 347 PRO HA H N N 348 PRO HB2 H N N 349 PRO HB3 H N N 350 PRO HG2 H N N 351 PRO HG3 H N N 352 PRO HD2 H N N 353 PRO HD3 H N N 354 PRO HXT H N N 355 SER N N N N 356 SER CA C N S 357 SER C C N N 358 SER O O N N 359 SER CB C N N 360 SER OG O N N 361 SER OXT O N N 362 SER H H N N 363 SER H2 H N N 364 SER HA H N N 365 SER HB2 H N N 366 SER HB3 H N N 367 SER HG H N N 368 SER HXT H N N 369 THR N N N N 370 THR CA C N S 371 THR C C N N 372 THR O O N N 373 THR CB C N R 374 THR OG1 O N N 375 THR CG2 C N N 376 THR OXT O N N 377 THR H H N N 378 THR H2 H N N 379 THR HA H N N 380 THR HB H N N 381 THR HG1 H N N 382 THR HG21 H N N 383 THR HG22 H N N 384 THR HG23 H N N 385 THR HXT H N N 386 TRP N N N N 387 TRP CA C N S 388 TRP C C N N 389 TRP O O N N 390 TRP CB C N N 391 TRP CG C Y N 392 TRP CD1 C Y N 393 TRP CD2 C Y N 394 TRP NE1 N Y N 395 TRP CE2 C Y N 396 TRP CE3 C Y N 397 TRP CZ2 C Y N 398 TRP CZ3 C Y N 399 TRP CH2 C Y N 400 TRP OXT O N N 401 TRP H H N N 402 TRP H2 H N N 403 TRP HA H N N 404 TRP HB2 H N N 405 TRP HB3 H N N 406 TRP HD1 H N N 407 TRP HE1 H N N 408 TRP HE3 H N N 409 TRP HZ2 H N N 410 TRP HZ3 H N N 411 TRP HH2 H N N 412 TRP HXT H N N 413 TYR N N N N 414 TYR CA C N S 415 TYR C C N N 416 TYR O O N N 417 TYR CB C N N 418 TYR CG C Y N 419 TYR CD1 C Y N 420 TYR CD2 C Y N 421 TYR CE1 C Y N 422 TYR CE2 C Y N 423 TYR CZ C Y N 424 TYR OH O N N 425 TYR OXT O N N 426 TYR H H N N 427 TYR H2 H N N 428 TYR HA H N N 429 TYR HB2 H N N 430 TYR HB3 H N N 431 TYR HD1 H N N 432 TYR HD2 H N N 433 TYR HE1 H N N 434 TYR HE2 H N N 435 TYR HH H N N 436 TYR HXT H N N 437 VAL N N N N 438 VAL CA C N S 439 VAL C C N N 440 VAL O O N N 441 VAL CB C N N 442 VAL CG1 C N N 443 VAL CG2 C N N 444 VAL OXT O N N 445 VAL H H N N 446 VAL H2 H N N 447 VAL HA H N N 448 VAL HB H N N 449 VAL HG11 H N N 450 VAL HG12 H N N 451 VAL HG13 H N N 452 VAL HG21 H N N 453 VAL HG22 H N N 454 VAL HG23 H N N 455 VAL HXT H N N 456 ZN ZN ZN N N 457 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AF4 C6 C7 sing N N 1 A1AF4 C6 N sing N N 2 A1AF4 C8 C9 sing N N 3 A1AF4 C8 N1 sing N N 4 A1AF4 C5 N sing N N 5 A1AF4 C5 C2 sing N N 6 A1AF4 C9 O sing N N 7 A1AF4 C1 C2 doub Y N 8 A1AF4 C1 C sing Y N 9 A1AF4 C7 N1 sing N N 10 A1AF4 C7 C12 sing N N 11 A1AF4 N C12 sing N N 12 A1AF4 F C sing N N 13 A1AF4 C2 C3 sing Y N 14 A1AF4 N1 C11 sing N N 15 A1AF4 C C13 doub Y N 16 A1AF4 O C10 sing N N 17 A1AF4 C10 C11 sing N N 18 A1AF4 C27 C26 doub Y N 19 A1AF4 C27 C15 sing Y N 20 A1AF4 C3 C4 doub Y N 21 A1AF4 C13 C4 sing Y N 22 A1AF4 C13 C14 sing N N 23 A1AF4 C26 C25 sing Y N 24 A1AF4 N2 C15 sing N N 25 A1AF4 N2 C14 sing N N 26 A1AF4 C15 C16 doub Y N 27 A1AF4 C25 C17 doub Y N 28 A1AF4 C16 C17 sing Y N 29 A1AF4 C16 C24 sing N N 30 A1AF4 C17 C18 sing N N 31 A1AF4 C24 O3 doub N N 32 A1AF4 C24 N3 sing N N 33 A1AF4 C18 N3 sing N N 34 A1AF4 C18 O4 doub N N 35 A1AF4 N3 C19 sing N N 36 A1AF4 C19 C20 sing N N 37 A1AF4 C19 C23 sing N N 38 A1AF4 O2 C20 doub N N 39 A1AF4 C20 N4 sing N N 40 A1AF4 C23 C22 sing N N 41 A1AF4 C22 C21 sing N N 42 A1AF4 N4 C21 sing N N 43 A1AF4 C21 O1 doub N N 44 A1AF4 C7 H2 sing N N 45 A1AF4 C8 H3 sing N N 46 A1AF4 C8 H4 sing N N 47 A1AF4 N2 H5 sing N N 48 A1AF4 C9 H6 sing N N 49 A1AF4 C9 H7 sing N N 50 A1AF4 C1 H8 sing N N 51 A1AF4 C5 H9 sing N N 52 A1AF4 C5 H10 sing N N 53 A1AF4 C6 H11 sing N N 54 A1AF4 C6 H12 sing N N 55 A1AF4 C4 H13 sing N N 56 A1AF4 C3 H14 sing N N 57 A1AF4 N4 H15 sing N N 58 A1AF4 C10 H17 sing N N 59 A1AF4 C10 H18 sing N N 60 A1AF4 C11 H19 sing N N 61 A1AF4 C11 H20 sing N N 62 A1AF4 C12 H21 sing N N 63 A1AF4 C12 H22 sing N N 64 A1AF4 C14 H23 sing N N 65 A1AF4 C14 H24 sing N N 66 A1AF4 C19 H25 sing N N 67 A1AF4 C22 H26 sing N N 68 A1AF4 C22 H27 sing N N 69 A1AF4 C23 H28 sing N N 70 A1AF4 C23 H29 sing N N 71 A1AF4 C25 H30 sing N N 72 A1AF4 C26 H31 sing N N 73 A1AF4 C27 H32 sing N N 74 ALA N CA sing N N 75 ALA N H sing N N 76 ALA N H2 sing N N 77 ALA CA C sing N N 78 ALA CA CB sing N N 79 ALA CA HA sing N N 80 ALA C O doub N N 81 ALA C OXT sing N N 82 ALA CB HB1 sing N N 83 ALA CB HB2 sing N N 84 ALA CB HB3 sing N N 85 ALA OXT HXT sing N N 86 ARG N CA sing N N 87 ARG N H sing N N 88 ARG N H2 sing N N 89 ARG CA C sing N N 90 ARG CA CB sing N N 91 ARG CA HA sing N N 92 ARG C O doub N N 93 ARG C OXT sing N N 94 ARG CB CG sing N N 95 ARG CB HB2 sing N N 96 ARG CB HB3 sing N N 97 ARG CG CD sing N N 98 ARG CG HG2 sing N N 99 ARG CG HG3 sing N N 100 ARG CD NE sing N N 101 ARG CD HD2 sing N N 102 ARG CD HD3 sing N N 103 ARG NE CZ sing N N 104 ARG NE HE sing N N 105 ARG CZ NH1 sing N N 106 ARG CZ NH2 doub N N 107 ARG NH1 HH11 sing N N 108 ARG NH1 HH12 sing N N 109 ARG NH2 HH21 sing N N 110 ARG NH2 HH22 sing N N 111 ARG OXT HXT sing N N 112 ASN N CA sing N N 113 ASN N H sing N N 114 ASN N H2 sing N N 115 ASN CA C sing N N 116 ASN CA CB sing N N 117 ASN CA HA sing N N 118 ASN C O doub N N 119 ASN C OXT sing N N 120 ASN CB CG sing N N 121 ASN CB HB2 sing N N 122 ASN CB HB3 sing N N 123 ASN CG OD1 doub N N 124 ASN CG ND2 sing N N 125 ASN ND2 HD21 sing N N 126 ASN ND2 HD22 sing N N 127 ASN OXT HXT sing N N 128 ASP N CA sing N N 129 ASP N H sing N N 130 ASP N H2 sing N N 131 ASP CA C sing N N 132 ASP CA CB sing N N 133 ASP CA HA sing N N 134 ASP C O doub N N 135 ASP C OXT sing N N 136 ASP CB CG sing N N 137 ASP CB HB2 sing N N 138 ASP CB HB3 sing N N 139 ASP CG OD1 doub N N 140 ASP CG OD2 sing N N 141 ASP OD2 HD2 sing N N 142 ASP OXT HXT sing N N 143 CYS N CA sing N N 144 CYS N H sing N N 145 CYS N H2 sing N N 146 CYS CA C sing N N 147 CYS CA CB sing N N 148 CYS CA HA sing N N 149 CYS C O doub N N 150 CYS C OXT sing N N 151 CYS CB SG sing N N 152 CYS CB HB2 sing N N 153 CYS CB HB3 sing N N 154 CYS SG HG sing N N 155 CYS OXT HXT sing N N 156 GLN N CA sing N N 157 GLN N H sing N N 158 GLN N H2 sing N N 159 GLN CA C sing N N 160 GLN CA CB sing N N 161 GLN CA HA sing N N 162 GLN C O doub N N 163 GLN C OXT sing N N 164 GLN CB CG sing N N 165 GLN CB HB2 sing N N 166 GLN CB HB3 sing N N 167 GLN CG CD sing N N 168 GLN CG HG2 sing N N 169 GLN CG HG3 sing N N 170 GLN CD OE1 doub N N 171 GLN CD NE2 sing N N 172 GLN NE2 HE21 sing N N 173 GLN NE2 HE22 sing N N 174 GLN OXT HXT sing N N 175 GLU N CA sing N N 176 GLU N H sing N N 177 GLU N H2 sing N N 178 GLU CA C sing N N 179 GLU CA CB sing N N 180 GLU CA HA sing N N 181 GLU C O doub N N 182 GLU C OXT sing N N 183 GLU CB CG sing N N 184 GLU CB HB2 sing N N 185 GLU CB HB3 sing N N 186 GLU CG CD sing N N 187 GLU CG HG2 sing N N 188 GLU CG HG3 sing N N 189 GLU CD OE1 doub N N 190 GLU CD OE2 sing N N 191 GLU OE2 HE2 sing N N 192 GLU OXT HXT sing N N 193 GLY N CA sing N N 194 GLY N H sing N N 195 GLY N H2 sing N N 196 GLY CA C sing N N 197 GLY CA HA2 sing N N 198 GLY CA HA3 sing N N 199 GLY C O doub N N 200 GLY C OXT sing N N 201 GLY OXT HXT sing N N 202 HIS N CA sing N N 203 HIS N H sing N N 204 HIS N H2 sing N N 205 HIS CA C sing N N 206 HIS CA CB sing N N 207 HIS CA HA sing N N 208 HIS C O doub N N 209 HIS C OXT sing N N 210 HIS CB CG sing N N 211 HIS CB HB2 sing N N 212 HIS CB HB3 sing N N 213 HIS CG ND1 sing Y N 214 HIS CG CD2 doub Y N 215 HIS ND1 CE1 doub Y N 216 HIS ND1 HD1 sing N N 217 HIS CD2 NE2 sing Y N 218 HIS CD2 HD2 sing N N 219 HIS CE1 NE2 sing Y N 220 HIS CE1 HE1 sing N N 221 HIS NE2 HE2 sing N N 222 HIS OXT HXT sing N N 223 ILE N CA sing N N 224 ILE N H sing N N 225 ILE N H2 sing N N 226 ILE CA C sing N N 227 ILE CA CB sing N N 228 ILE CA HA sing N N 229 ILE C O doub N N 230 ILE C OXT sing N N 231 ILE CB CG1 sing N N 232 ILE CB CG2 sing N N 233 ILE CB HB sing N N 234 ILE CG1 CD1 sing N N 235 ILE CG1 HG12 sing N N 236 ILE CG1 HG13 sing N N 237 ILE CG2 HG21 sing N N 238 ILE CG2 HG22 sing N N 239 ILE CG2 HG23 sing N N 240 ILE CD1 HD11 sing N N 241 ILE CD1 HD12 sing N N 242 ILE CD1 HD13 sing N N 243 ILE OXT HXT sing N N 244 LEU N CA sing N N 245 LEU N H sing N N 246 LEU N H2 sing N N 247 LEU CA C sing N N 248 LEU CA CB sing N N 249 LEU CA HA sing N N 250 LEU C O doub N N 251 LEU C OXT sing N N 252 LEU CB CG sing N N 253 LEU CB HB2 sing N N 254 LEU CB HB3 sing N N 255 LEU CG CD1 sing N N 256 LEU CG CD2 sing N N 257 LEU CG HG sing N N 258 LEU CD1 HD11 sing N N 259 LEU CD1 HD12 sing N N 260 LEU CD1 HD13 sing N N 261 LEU CD2 HD21 sing N N 262 LEU CD2 HD22 sing N N 263 LEU CD2 HD23 sing N N 264 LEU OXT HXT sing N N 265 LYS N CA sing N N 266 LYS N H sing N N 267 LYS N H2 sing N N 268 LYS CA C sing N N 269 LYS CA CB sing N N 270 LYS CA HA sing N N 271 LYS C O doub N N 272 LYS C OXT sing N N 273 LYS CB CG sing N N 274 LYS CB HB2 sing N N 275 LYS CB HB3 sing N N 276 LYS CG CD sing N N 277 LYS CG HG2 sing N N 278 LYS CG HG3 sing N N 279 LYS CD CE sing N N 280 LYS CD HD2 sing N N 281 LYS CD HD3 sing N N 282 LYS CE NZ sing N N 283 LYS CE HE2 sing N N 284 LYS CE HE3 sing N N 285 LYS NZ HZ1 sing N N 286 LYS NZ HZ2 sing N N 287 LYS NZ HZ3 sing N N 288 LYS OXT HXT sing N N 289 MET N CA sing N N 290 MET N H sing N N 291 MET N H2 sing N N 292 MET CA C sing N N 293 MET CA CB sing N N 294 MET CA HA sing N N 295 MET C O doub N N 296 MET C OXT sing N N 297 MET CB CG sing N N 298 MET CB HB2 sing N N 299 MET CB HB3 sing N N 300 MET CG SD sing N N 301 MET CG HG2 sing N N 302 MET CG HG3 sing N N 303 MET SD CE sing N N 304 MET CE HE1 sing N N 305 MET CE HE2 sing N N 306 MET CE HE3 sing N N 307 MET OXT HXT sing N N 308 PHE N CA sing N N 309 PHE N H sing N N 310 PHE N H2 sing N N 311 PHE CA C sing N N 312 PHE CA CB sing N N 313 PHE CA HA sing N N 314 PHE C O doub N N 315 PHE C OXT sing N N 316 PHE CB CG sing N N 317 PHE CB HB2 sing N N 318 PHE CB HB3 sing N N 319 PHE CG CD1 doub Y N 320 PHE CG CD2 sing Y N 321 PHE CD1 CE1 sing Y N 322 PHE CD1 HD1 sing N N 323 PHE CD2 CE2 doub Y N 324 PHE CD2 HD2 sing N N 325 PHE CE1 CZ doub Y N 326 PHE CE1 HE1 sing N N 327 PHE CE2 CZ sing Y N 328 PHE CE2 HE2 sing N N 329 PHE CZ HZ sing N N 330 PHE OXT HXT sing N N 331 PRO N CA sing N N 332 PRO N CD sing N N 333 PRO N H sing N N 334 PRO CA C sing N N 335 PRO CA CB sing N N 336 PRO CA HA sing N N 337 PRO C O doub N N 338 PRO C OXT sing N N 339 PRO CB CG sing N N 340 PRO CB HB2 sing N N 341 PRO CB HB3 sing N N 342 PRO CG CD sing N N 343 PRO CG HG2 sing N N 344 PRO CG HG3 sing N N 345 PRO CD HD2 sing N N 346 PRO CD HD3 sing N N 347 PRO OXT HXT sing N N 348 SER N CA sing N N 349 SER N H sing N N 350 SER N H2 sing N N 351 SER CA C sing N N 352 SER CA CB sing N N 353 SER CA HA sing N N 354 SER C O doub N N 355 SER C OXT sing N N 356 SER CB OG sing N N 357 SER CB HB2 sing N N 358 SER CB HB3 sing N N 359 SER OG HG sing N N 360 SER OXT HXT sing N N 361 THR N CA sing N N 362 THR N H sing N N 363 THR N H2 sing N N 364 THR CA C sing N N 365 THR CA CB sing N N 366 THR CA HA sing N N 367 THR C O doub N N 368 THR C OXT sing N N 369 THR CB OG1 sing N N 370 THR CB CG2 sing N N 371 THR CB HB sing N N 372 THR OG1 HG1 sing N N 373 THR CG2 HG21 sing N N 374 THR CG2 HG22 sing N N 375 THR CG2 HG23 sing N N 376 THR OXT HXT sing N N 377 TRP N CA sing N N 378 TRP N H sing N N 379 TRP N H2 sing N N 380 TRP CA C sing N N 381 TRP CA CB sing N N 382 TRP CA HA sing N N 383 TRP C O doub N N 384 TRP C OXT sing N N 385 TRP CB CG sing N N 386 TRP CB HB2 sing N N 387 TRP CB HB3 sing N N 388 TRP CG CD1 doub Y N 389 TRP CG CD2 sing Y N 390 TRP CD1 NE1 sing Y N 391 TRP CD1 HD1 sing N N 392 TRP CD2 CE2 doub Y N 393 TRP CD2 CE3 sing Y N 394 TRP NE1 CE2 sing Y N 395 TRP NE1 HE1 sing N N 396 TRP CE2 CZ2 sing Y N 397 TRP CE3 CZ3 doub Y N 398 TRP CE3 HE3 sing N N 399 TRP CZ2 CH2 doub Y N 400 TRP CZ2 HZ2 sing N N 401 TRP CZ3 CH2 sing Y N 402 TRP CZ3 HZ3 sing N N 403 TRP CH2 HH2 sing N N 404 TRP OXT HXT sing N N 405 TYR N CA sing N N 406 TYR N H sing N N 407 TYR N H2 sing N N 408 TYR CA C sing N N 409 TYR CA CB sing N N 410 TYR CA HA sing N N 411 TYR C O doub N N 412 TYR C OXT sing N N 413 TYR CB CG sing N N 414 TYR CB HB2 sing N N 415 TYR CB HB3 sing N N 416 TYR CG CD1 doub Y N 417 TYR CG CD2 sing Y N 418 TYR CD1 CE1 sing Y N 419 TYR CD1 HD1 sing N N 420 TYR CD2 CE2 doub Y N 421 TYR CD2 HD2 sing N N 422 TYR CE1 CZ doub Y N 423 TYR CE1 HE1 sing N N 424 TYR CE2 CZ sing Y N 425 TYR CE2 HE2 sing N N 426 TYR CZ OH sing N N 427 TYR OH HH sing N N 428 TYR OXT HXT sing N N 429 VAL N CA sing N N 430 VAL N H sing N N 431 VAL N H2 sing N N 432 VAL CA C sing N N 433 VAL CA CB sing N N 434 VAL CA HA sing N N 435 VAL C O doub N N 436 VAL C OXT sing N N 437 VAL CB CG1 sing N N 438 VAL CB CG2 sing N N 439 VAL CB HB sing N N 440 VAL CG1 HG11 sing N N 441 VAL CG1 HG12 sing N N 442 VAL CG1 HG13 sing N N 443 VAL CG2 HG21 sing N N 444 VAL CG2 HG22 sing N N 445 VAL CG2 HG23 sing N N 446 VAL OXT HXT sing N N 447 # _em_admin.current_status REL _em_admin.deposition_date 2025-09-09 _em_admin.deposition_site RCSB _em_admin.entry_id 9Y7D _em_admin.last_update 2025-10-15 _em_admin.map_release_date 2025-10-15 _em_admin.title 'Cereblon with Golcadomide and Ikaros ZF1-2-3' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 7108 _em_entity_assembly_recombinant.organism 'Spodoptera frugiperda' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? # _em_specimen.concentration 0.5 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9Y7D _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C F N O S ZN # loop_ # loop_ #