data_9YBW # _entry.id 9YBW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9YBW pdb_00009ybw 10.2210/pdb9ybw/pdb WWPDB D_1000299007 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-08-05 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9YBW _pdbx_database_status.recvd_initial_deposition_date 2025-09-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 michael.j.holliday@gmail.com Michael Holliday ? 'principal investigator/group leader' 0000-0002-1112-9892 3 ccarbone@relaytx.com Christine Carbone ? 'principal investigator/group leader' 0000-0001-5502-0859 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Carbone, C.E.' 1 ? 'Holliday, M.J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Cryptic Small Molecule Binding Sites in the ARID1B DNA Binding Domain' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Holliday, M.J.' 1 ? primary 'Carbone, C.E.' 2 ? primary 'Pierce, L.' 3 ? primary 'Zhao, V.Y.' 4 ? primary 'Schoenherr, H.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'AT-rich interactive domain-containing protein 1B' 13521.431 1 ? ? 'UNP residues 1124-1242' ? 2 non-polymer syn 'ZINC ION' 65.409 6 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 3 ? ? ? ? 4 non-polymer syn "(2M)-2'-(morpholin-4-yl)-6-oxo-4-(trifluoromethyl)-1,6-dihydro[2,3'-bipyridine]-5-carbonitrile" 350.295 1 ? ? ? ? 5 water nat water 18.015 56 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ARID domain-containing protein 1B,BRG1-associated factor 250b,BAF250B,BRG1-binding protein hELD/OSA1,Osa homolog 2,hOsa2,p250R' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVG TSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDT ; _entity_poly.pdbx_seq_one_letter_code_can ;GGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVG TSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'ACETATE ION' ACT 4 "(2M)-2'-(morpholin-4-yl)-6-oxo-4-(trifluoromethyl)-1,6-dihydro[2,3'-bipyridine]-5-carbonitrile" A1CUA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 GLU n 1 4 LYS n 1 5 ILE n 1 6 THR n 1 7 LYS n 1 8 VAL n 1 9 TYR n 1 10 GLU n 1 11 LEU n 1 12 GLY n 1 13 ASN n 1 14 GLU n 1 15 PRO n 1 16 GLU n 1 17 ARG n 1 18 LYS n 1 19 LEU n 1 20 TRP n 1 21 VAL n 1 22 ASP n 1 23 ARG n 1 24 TYR n 1 25 LEU n 1 26 THR n 1 27 PHE n 1 28 MET n 1 29 GLU n 1 30 GLU n 1 31 ARG n 1 32 GLY n 1 33 SER n 1 34 PRO n 1 35 VAL n 1 36 SER n 1 37 SER n 1 38 LEU n 1 39 PRO n 1 40 ALA n 1 41 VAL n 1 42 GLY n 1 43 LYS n 1 44 LYS n 1 45 PRO n 1 46 LEU n 1 47 ASP n 1 48 LEU n 1 49 PHE n 1 50 ARG n 1 51 LEU n 1 52 TYR n 1 53 VAL n 1 54 CYS n 1 55 VAL n 1 56 LYS n 1 57 GLU n 1 58 ILE n 1 59 GLY n 1 60 GLY n 1 61 LEU n 1 62 ALA n 1 63 GLN n 1 64 VAL n 1 65 ASN n 1 66 LYS n 1 67 ASN n 1 68 LYS n 1 69 LYS n 1 70 TRP n 1 71 ARG n 1 72 GLU n 1 73 LEU n 1 74 ALA n 1 75 THR n 1 76 ASN n 1 77 LEU n 1 78 ASN n 1 79 VAL n 1 80 GLY n 1 81 THR n 1 82 SER n 1 83 SER n 1 84 SER n 1 85 ALA n 1 86 ALA n 1 87 SER n 1 88 SER n 1 89 LEU n 1 90 LYS n 1 91 LYS n 1 92 GLN n 1 93 TYR n 1 94 ILE n 1 95 GLN n 1 96 TYR n 1 97 LEU n 1 98 PHE n 1 99 ALA n 1 100 PHE n 1 101 GLU n 1 102 CYS n 1 103 LYS n 1 104 ILE n 1 105 GLU n 1 106 ARG n 1 107 GLY n 1 108 GLU n 1 109 GLU n 1 110 PRO n 1 111 PRO n 1 112 PRO n 1 113 GLU n 1 114 VAL n 1 115 PHE n 1 116 SER n 1 117 THR n 1 118 GLY n 1 119 ASP n 1 120 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 120 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ARID1B, BAF250B, DAN15, KIAA1235, OSA2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1CUA non-polymer . "(2M)-2'-(morpholin-4-yl)-6-oxo-4-(trifluoromethyl)-1,6-dihydro[2,3'-bipyridine]-5-carbonitrile" ? 'C16 H13 F3 N4 O2' 350.295 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1040 ? ? ? A . n A 1 2 GLY 2 1041 ? ? ? A . n A 1 3 GLU 3 1042 ? ? ? A . n A 1 4 LYS 4 1043 ? ? ? A . n A 1 5 ILE 5 1044 ? ? ? A . n A 1 6 THR 6 1045 ? ? ? A . n A 1 7 LYS 7 1046 ? ? ? A . n A 1 8 VAL 8 1047 ? ? ? A . n A 1 9 TYR 9 1048 ? ? ? A . n A 1 10 GLU 10 1049 ? ? ? A . n A 1 11 LEU 11 1050 ? ? ? A . n A 1 12 GLY 12 1051 ? ? ? A . n A 1 13 ASN 13 1052 ? ? ? A . n A 1 14 GLU 14 1053 1053 GLU GLU A . n A 1 15 PRO 15 1054 1054 PRO PRO A . n A 1 16 GLU 16 1055 1055 GLU GLU A . n A 1 17 ARG 17 1056 1056 ARG ARG A . n A 1 18 LYS 18 1057 1057 LYS LYS A . n A 1 19 LEU 19 1058 1058 LEU LEU A . n A 1 20 TRP 20 1059 1059 TRP TRP A . n A 1 21 VAL 21 1060 1060 VAL VAL A . n A 1 22 ASP 22 1061 1061 ASP ASP A . n A 1 23 ARG 23 1062 1062 ARG ARG A . n A 1 24 TYR 24 1063 1063 TYR TYR A . n A 1 25 LEU 25 1064 1064 LEU LEU A . n A 1 26 THR 26 1065 1065 THR THR A . n A 1 27 PHE 27 1066 1066 PHE PHE A . n A 1 28 MET 28 1067 1067 MET MET A . n A 1 29 GLU 29 1068 1068 GLU GLU A . n A 1 30 GLU 30 1069 1069 GLU GLU A . n A 1 31 ARG 31 1070 1070 ARG ARG A . n A 1 32 GLY 32 1071 1071 GLY GLY A . n A 1 33 SER 33 1072 1072 SER SER A . n A 1 34 PRO 34 1073 1073 PRO PRO A . n A 1 35 VAL 35 1074 1074 VAL VAL A . n A 1 36 SER 36 1075 1075 SER SER A . n A 1 37 SER 37 1076 1076 SER SER A . n A 1 38 LEU 38 1077 1077 LEU LEU A . n A 1 39 PRO 39 1078 1078 PRO PRO A . n A 1 40 ALA 40 1079 1079 ALA ALA A . n A 1 41 VAL 41 1080 1080 VAL VAL A . n A 1 42 GLY 42 1081 1081 GLY GLY A . n A 1 43 LYS 43 1082 1082 LYS LYS A . n A 1 44 LYS 44 1083 1083 LYS LYS A . n A 1 45 PRO 45 1084 1084 PRO PRO A . n A 1 46 LEU 46 1085 1085 LEU LEU A . n A 1 47 ASP 47 1086 1086 ASP ASP A . n A 1 48 LEU 48 1087 1087 LEU LEU A . n A 1 49 PHE 49 1088 1088 PHE PHE A . n A 1 50 ARG 50 1089 1089 ARG ARG A . n A 1 51 LEU 51 1090 1090 LEU LEU A . n A 1 52 TYR 52 1091 1091 TYR TYR A . n A 1 53 VAL 53 1092 1092 VAL VAL A . n A 1 54 CYS 54 1093 1093 CYS CYS A . n A 1 55 VAL 55 1094 1094 VAL VAL A . n A 1 56 LYS 56 1095 1095 LYS LYS A . n A 1 57 GLU 57 1096 1096 GLU GLU A . n A 1 58 ILE 58 1097 1097 ILE ILE A . n A 1 59 GLY 59 1098 1098 GLY GLY A . n A 1 60 GLY 60 1099 1099 GLY GLY A . n A 1 61 LEU 61 1100 1100 LEU LEU A . n A 1 62 ALA 62 1101 1101 ALA ALA A . n A 1 63 GLN 63 1102 1102 GLN GLN A . n A 1 64 VAL 64 1103 1103 VAL VAL A . n A 1 65 ASN 65 1104 1104 ASN ASN A . n A 1 66 LYS 66 1105 1105 LYS LYS A . n A 1 67 ASN 67 1106 1106 ASN ASN A . n A 1 68 LYS 68 1107 1107 LYS LYS A . n A 1 69 LYS 69 1108 1108 LYS LYS A . n A 1 70 TRP 70 1109 1109 TRP TRP A . n A 1 71 ARG 71 1110 1110 ARG ARG A . n A 1 72 GLU 72 1111 1111 GLU GLU A . n A 1 73 LEU 73 1112 1112 LEU LEU A . n A 1 74 ALA 74 1113 1113 ALA ALA A . n A 1 75 THR 75 1114 1114 THR THR A . n A 1 76 ASN 76 1115 1115 ASN ASN A . n A 1 77 LEU 77 1116 1116 LEU LEU A . n A 1 78 ASN 78 1117 1117 ASN ASN A . n A 1 79 VAL 79 1118 1118 VAL VAL A . n A 1 80 GLY 80 1119 1119 GLY GLY A . n A 1 81 THR 81 1120 1120 THR THR A . n A 1 82 SER 82 1121 1121 SER SER A . n A 1 83 SER 83 1122 1122 SER SER A . n A 1 84 SER 84 1123 1123 SER SER A . n A 1 85 ALA 85 1124 1124 ALA ALA A . n A 1 86 ALA 86 1125 1125 ALA ALA A . n A 1 87 SER 87 1126 1126 SER SER A . n A 1 88 SER 88 1127 1127 SER SER A . n A 1 89 LEU 89 1128 1128 LEU LEU A . n A 1 90 LYS 90 1129 1129 LYS LYS A . n A 1 91 LYS 91 1130 1130 LYS LYS A . n A 1 92 GLN 92 1131 1131 GLN GLN A . n A 1 93 TYR 93 1132 1132 TYR TYR A . n A 1 94 ILE 94 1133 1133 ILE ILE A . n A 1 95 GLN 95 1134 1134 GLN GLN A . n A 1 96 TYR 96 1135 1135 TYR TYR A . n A 1 97 LEU 97 1136 1136 LEU LEU A . n A 1 98 PHE 98 1137 1137 PHE PHE A . n A 1 99 ALA 99 1138 1138 ALA ALA A . n A 1 100 PHE 100 1139 1139 PHE PHE A . n A 1 101 GLU 101 1140 1140 GLU GLU A . n A 1 102 CYS 102 1141 1141 CYS CYS A . n A 1 103 LYS 103 1142 1142 LYS LYS A . n A 1 104 ILE 104 1143 1143 ILE ILE A . n A 1 105 GLU 105 1144 1144 GLU GLU A . n A 1 106 ARG 106 1145 1145 ARG ARG A . n A 1 107 GLY 107 1146 1146 GLY GLY A . n A 1 108 GLU 108 1147 1147 GLU GLU A . n A 1 109 GLU 109 1148 1148 GLU GLU A . n A 1 110 PRO 110 1149 1149 PRO PRO A . n A 1 111 PRO 111 1150 1150 PRO PRO A . n A 1 112 PRO 112 1151 1151 PRO PRO A . n A 1 113 GLU 113 1152 1152 GLU GLU A . n A 1 114 VAL 114 1153 ? ? ? A . n A 1 115 PHE 115 1154 ? ? ? A . n A 1 116 SER 116 1155 ? ? ? A . n A 1 117 THR 117 1156 ? ? ? A . n A 1 118 GLY 118 1157 ? ? ? A . n A 1 119 ASP 119 1158 ? ? ? A . n A 1 120 THR 120 1159 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1CUA _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1CUA _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 1201 1 ZN ZN A . C 2 ZN 1 1202 3 ZN ZN A . D 2 ZN 1 1203 5 ZN ZN A . E 2 ZN 1 1204 6 ZN ZN A . F 2 ZN 1 1205 7 ZN ZN A . G 2 ZN 1 1206 8 ZN ZN A . H 3 ACT 1 1207 1 ACT ACT A . I 3 ACT 1 1208 2 ACT ACT A . J 3 ACT 1 1209 3 ACT ACT A . K 4 A1CUA 1 1210 1 A1CUA LIG A . L 5 HOH 1 1301 267 HOH HOH A . L 5 HOH 2 1302 26 HOH HOH A . L 5 HOH 3 1303 325 HOH HOH A . L 5 HOH 4 1304 32 HOH HOH A . L 5 HOH 5 1305 27 HOH HOH A . L 5 HOH 6 1306 13 HOH HOH A . L 5 HOH 7 1307 18 HOH HOH A . L 5 HOH 8 1308 205 HOH HOH A . L 5 HOH 9 1309 10 HOH HOH A . L 5 HOH 10 1310 9 HOH HOH A . L 5 HOH 11 1311 99 HOH HOH A . L 5 HOH 12 1312 3 HOH HOH A . L 5 HOH 13 1313 39 HOH HOH A . L 5 HOH 14 1314 101 HOH HOH A . L 5 HOH 15 1315 14 HOH HOH A . L 5 HOH 16 1316 5 HOH HOH A . L 5 HOH 17 1317 43 HOH HOH A . L 5 HOH 18 1318 250 HOH HOH A . L 5 HOH 19 1319 8 HOH HOH A . L 5 HOH 20 1320 7 HOH HOH A . L 5 HOH 21 1321 34 HOH HOH A . L 5 HOH 22 1322 25 HOH HOH A . L 5 HOH 23 1323 16 HOH HOH A . L 5 HOH 24 1324 4 HOH HOH A . L 5 HOH 25 1325 11 HOH HOH A . L 5 HOH 26 1326 270 HOH HOH A . L 5 HOH 27 1327 35 HOH HOH A . L 5 HOH 28 1328 36 HOH HOH A . L 5 HOH 29 1329 15 HOH HOH A . L 5 HOH 30 1330 23 HOH HOH A . L 5 HOH 31 1331 58 HOH HOH A . L 5 HOH 32 1332 29 HOH HOH A . L 5 HOH 33 1333 55 HOH HOH A . L 5 HOH 34 1334 65 HOH HOH A . L 5 HOH 35 1335 17 HOH HOH A . L 5 HOH 36 1336 28 HOH HOH A . L 5 HOH 37 1337 21 HOH HOH A . L 5 HOH 38 1338 265 HOH HOH A . L 5 HOH 39 1339 79 HOH HOH A . L 5 HOH 40 1340 50 HOH HOH A . L 5 HOH 41 1341 20 HOH HOH A . L 5 HOH 42 1342 31 HOH HOH A . L 5 HOH 43 1343 6 HOH HOH A . L 5 HOH 44 1344 61 HOH HOH A . L 5 HOH 45 1345 97 HOH HOH A . L 5 HOH 46 1346 44 HOH HOH A . L 5 HOH 47 1347 203 HOH HOH A . L 5 HOH 48 1348 1 HOH HOH A . L 5 HOH 49 1349 80 HOH HOH A . L 5 HOH 50 1350 52 HOH HOH A . L 5 HOH 51 1351 252 HOH HOH A . L 5 HOH 52 1352 297 HOH HOH A . L 5 HOH 53 1353 211 HOH HOH A . L 5 HOH 54 1354 37 HOH HOH A . L 5 HOH 55 1355 178 HOH HOH A . L 5 HOH 56 1356 162 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.2_5419+SVN ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9YBW _cell.details ? _cell.formula_units_Z ? _cell.length_a 90.320 _cell.length_a_esd ? _cell.length_b 90.320 _cell.length_b_esd ? _cell.length_c 37.740 _cell.length_c_esd ? _cell.volume 307871.689 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9YBW _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall 'P 4ab 2ab' _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9YBW _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.85 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;10.7% PEG3350, 0.044 M zinc acetate, 0.025% w/v 3,5-dinitrosalicylic acid, 0.025% w/v 4-aminobenzoic acid, 0.025% w/v salicylic acid, 0.025% w/v trimesic acid, 0.002 M HEPES sodium, pH 6.8 ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 277 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-10-08 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11584 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.11584 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 33.30 _reflns.entry_id 9YBW _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.88 _reflns.d_resolution_low 64.04 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13242 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.65 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 16.28 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.031 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.123 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.88 _reflns_shell.d_res_low 1.95 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1273 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 15.61 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.592 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.22 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 2.067 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 38.15 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9YBW _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.88 _refine.ls_d_res_low 63.87 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13210 _refine.ls_number_reflns_R_free 1321 _refine.ls_number_reflns_R_work 11889 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.95 _refine.ls_percent_reflns_R_free 10.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2047 _refine.ls_R_factor_R_free 0.2451 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2004 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.1327 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2853 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.88 _refine_hist.d_res_low 63.87 _refine_hist.number_atoms_solvent 56 _refine_hist.number_atoms_total 902 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 803 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0112 ? 857 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 1.2280 ? 1155 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0503 ? 118 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0148 ? 147 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 19.5080 ? 327 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.88 1.96 . . 141 1272 100.00 . . . . 0.3000 . . . . . . . . . . . . . . . 0.3210 'X-RAY DIFFRACTION' 1.96 2.04 . . 143 1285 100.00 . . . . 0.2736 . . . . . . . . . . . . . . . 0.3237 'X-RAY DIFFRACTION' 2.04 2.15 . . 144 1298 99.93 . . . . 0.2891 . . . . . . . . . . . . . . . 0.2943 'X-RAY DIFFRACTION' 2.15 2.29 . . 144 1297 100.00 . . . . 0.2968 . . . . . . . . . . . . . . . 0.3400 'X-RAY DIFFRACTION' 2.29 2.46 . . 145 1313 99.79 . . . . 0.2446 . . . . . . . . . . . . . . . 0.3123 'X-RAY DIFFRACTION' 2.46 2.71 . . 148 1318 99.93 . . . . 0.1687 . . . . . . . . . . . . . . . 0.2034 'X-RAY DIFFRACTION' 2.71 3.10 . . 145 1318 100.00 . . . . 0.1934 . . . . . . . . . . . . . . . 0.2248 'X-RAY DIFFRACTION' 3.10 3.91 . . 150 1350 100.00 . . . . 0.1864 . . . . . . . . . . . . . . . 0.2376 'X-RAY DIFFRACTION' 3.91 63.87 . . 161 1438 99.94 . . . . 0.1681 . . . . . . . . . . . . . . . 0.2195 # _struct.entry_id 9YBW _struct.title ;ARID1B ARID bound to compound B-2 ((2M)-2'-(morpholin-4-yl)-6-oxo-4-(trifluoromethyl)-1,6-dihydro[2,3'-bipyridine]-5-carbonitrile) ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9YBW _struct_keywords.text 'ARID, BAF, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ARI1B_HUMAN _struct_ref.pdbx_db_accession Q8NFD5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGT SSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDT ; _struct_ref.pdbx_align_begin 1124 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9YBW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 120 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8NFD5 _struct_ref_seq.db_align_beg 1124 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1242 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1041 _struct_ref_seq.pdbx_auth_seq_align_end 1159 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 9YBW _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8NFD5 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 1040 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 14 ? ARG A 31 ? GLU A 1053 ARG A 1070 1 ? 18 HELX_P HELX_P2 AA2 ASP A 47 ? GLY A 59 ? ASP A 1086 GLY A 1098 1 ? 13 HELX_P HELX_P3 AA3 GLY A 60 ? LYS A 68 ? GLY A 1099 LYS A 1107 1 ? 9 HELX_P HELX_P4 AA4 LYS A 69 ? LEU A 77 ? LYS A 1108 LEU A 1116 1 ? 9 HELX_P HELX_P5 AA5 SER A 82 ? LEU A 97 ? SER A 1121 LEU A 1136 1 ? 16 HELX_P HELX_P6 AA6 LEU A 97 ? ARG A 106 ? LEU A 1136 ARG A 1145 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 29 OE2 ? ? ? 1_555 F ZN . ZN ? ? A GLU 1068 A ZN 1205 4_455 ? ? ? ? ? ? ? 2.036 ? ? metalc2 metalc ? ? A GLU 30 OE1 ? ? ? 1_555 F ZN . ZN ? ? A GLU 1069 A ZN 1205 4_455 ? ? ? ? ? ? ? 2.079 ? ? metalc3 metalc ? ? A CYS 54 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 1093 A ZN 1202 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc4 metalc ? ? A CYS 54 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 1093 A ZN 1202 7_555 ? ? ? ? ? ? ? 2.340 ? ? metalc5 metalc ? ? A CYS 54 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 1093 A ZN 1204 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc6 metalc ? ? A GLU 57 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 1096 A ZN 1202 1_555 ? ? ? ? ? ? ? 1.923 ? ? metalc7 metalc ? ? A GLU 57 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 1096 A ZN 1202 7_555 ? ? ? ? ? ? ? 1.848 ? ? metalc8 metalc ? ? A GLU 57 OE2 ? ? ? 1_555 E ZN . ZN ? ? A GLU 1096 A ZN 1204 7_555 ? ? ? ? ? ? ? 1.948 ? ? metalc9 metalc ? ? A GLU 101 OE2 ? ? ? 1_555 D ZN . ZN ? ? A GLU 1140 A ZN 1203 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc10 metalc ? ? A CYS 102 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 1141 A ZN 1201 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc11 metalc ? ? A GLU 105 OE2 ? ? ? 1_555 B ZN . ZN ? ? A GLU 1144 A ZN 1201 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc12 metalc ? ? A GLU 105 OE1 ? ? ? 1_555 D ZN . ZN ? ? A GLU 1144 A ZN 1203 1_555 ? ? ? ? ? ? ? 2.110 ? ? metalc13 metalc ? ? A GLU 108 OE1 ? ? ? 1_555 F ZN . ZN ? ? A GLU 1147 A ZN 1205 1_555 ? ? ? ? ? ? ? 2.154 ? ? metalc14 metalc ? ? A GLU 108 OE2 ? ? ? 1_555 F ZN . ZN ? ? A GLU 1147 A ZN 1205 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc15 metalc ? ? B ZN . ZN ? ? ? 1_555 H ACT . OXT ? ? A ZN 1201 A ACT 1207 1_555 ? ? ? ? ? ? ? 1.979 ? ? metalc16 metalc ? ? B ZN . ZN ? ? ? 1_555 L HOH . O ? ? A ZN 1201 A HOH 1319 1_555 ? ? ? ? ? ? ? 2.057 ? ? metalc17 metalc ? ? D ZN . ZN ? ? ? 1_555 I ACT . O ? ? A ZN 1203 A ACT 1208 1_555 ? ? ? ? ? ? ? 2.497 ? ? metalc18 metalc ? ? D ZN . ZN ? ? ? 1_555 I ACT . OXT ? ? A ZN 1203 A ACT 1208 1_555 ? ? ? ? ? ? ? 2.105 ? ? metalc19 metalc ? ? D ZN . ZN ? ? ? 1_555 L HOH . O ? ? A ZN 1203 A HOH 1333 1_555 ? ? ? ? ? ? ? 2.043 ? ? metalc20 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? A ZN 1204 A HOH 1347 7_555 ? ? ? ? ? ? ? 2.252 ? ? metalc21 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? A ZN 1204 A HOH 1348 7_555 ? ? ? ? ? ? ? 2.275 ? ? metalc22 metalc ? ? F ZN . ZN ? ? ? 1_555 L HOH . O ? ? A ZN 1205 A HOH 1343 1_555 ? ? ? ? ? ? ? 2.168 ? ? metalc23 metalc ? ? G ZN . ZN ? ? ? 1_555 K A1CUA . N1 ? ? A ZN 1206 A A1CUA 1210 1_555 ? ? ? ? ? ? ? 2.603 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 29 ? A GLU 1068 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 OE1 ? A GLU 30 ? A GLU 1069 ? 1_555 109.7 ? 2 OE2 ? A GLU 29 ? A GLU 1068 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 OE1 ? A GLU 108 ? A GLU 1147 ? 1_555 91.9 ? 3 OE1 ? A GLU 30 ? A GLU 1069 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 OE1 ? A GLU 108 ? A GLU 1147 ? 1_555 39.5 ? 4 OE2 ? A GLU 29 ? A GLU 1068 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 OE2 ? A GLU 108 ? A GLU 1147 ? 1_555 89.9 ? 5 OE1 ? A GLU 30 ? A GLU 1069 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 OE2 ? A GLU 108 ? A GLU 1147 ? 1_555 42.4 ? 6 OE1 ? A GLU 108 ? A GLU 1147 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 OE2 ? A GLU 108 ? A GLU 1147 ? 1_555 3.0 ? 7 OE2 ? A GLU 29 ? A GLU 1068 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 O ? L HOH . ? A HOH 1343 ? 1_555 96.9 ? 8 OE1 ? A GLU 30 ? A GLU 1069 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 O ? L HOH . ? A HOH 1343 ? 1_555 34.3 ? 9 OE1 ? A GLU 108 ? A GLU 1147 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 O ? L HOH . ? A HOH 1343 ? 1_555 5.9 ? 10 OE2 ? A GLU 108 ? A GLU 1147 ? 1_555 ZN ? F ZN . ? A ZN 1205 ? 4_455 O ? L HOH . ? A HOH 1343 ? 1_555 8.9 ? 11 SG ? A CYS 54 ? A CYS 1093 ? 1_555 ZN ? C ZN . ? A ZN 1202 ? 1_555 SG ? A CYS 54 ? A CYS 1093 ? 1_555 0.0 ? 12 SG ? A CYS 54 ? A CYS 1093 ? 1_555 ZN ? C ZN . ? A ZN 1202 ? 1_555 OE1 ? A GLU 57 ? A GLU 1096 ? 1_555 110.2 ? 13 SG ? A CYS 54 ? A CYS 1093 ? 1_555 ZN ? C ZN . ? A ZN 1202 ? 1_555 OE1 ? A GLU 57 ? A GLU 1096 ? 1_555 110.2 ? 14 SG ? A CYS 54 ? A CYS 1093 ? 1_555 ZN ? C ZN . ? A ZN 1202 ? 1_555 OE1 ? A GLU 57 ? A GLU 1096 ? 1_555 110.2 ? 15 SG ? A CYS 54 ? A CYS 1093 ? 1_555 ZN ? C ZN . ? A ZN 1202 ? 1_555 OE1 ? A GLU 57 ? A GLU 1096 ? 1_555 110.2 ? 16 OE1 ? A GLU 57 ? A GLU 1096 ? 1_555 ZN ? C ZN . ? A ZN 1202 ? 1_555 OE1 ? A GLU 57 ? A GLU 1096 ? 1_555 0.0 ? 17 SG ? A CYS 54 ? A CYS 1093 ? 1_555 ZN ? E ZN . ? A ZN 1204 ? 1_555 OE2 ? A GLU 57 ? A GLU 1096 ? 1_555 35.0 ? 18 SG ? A CYS 54 ? A CYS 1093 ? 1_555 ZN ? E ZN . ? A ZN 1204 ? 1_555 O ? L HOH . ? A HOH 1347 ? 7_555 110.3 ? 19 OE2 ? A GLU 57 ? A GLU 1096 ? 1_555 ZN ? E ZN . ? A ZN 1204 ? 1_555 O ? L HOH . ? A HOH 1347 ? 7_555 91.3 ? 20 SG ? A CYS 54 ? A CYS 1093 ? 1_555 ZN ? E ZN . ? A ZN 1204 ? 1_555 O ? L HOH . ? A HOH 1348 ? 7_555 114.7 ? 21 OE2 ? A GLU 57 ? A GLU 1096 ? 1_555 ZN ? E ZN . ? A ZN 1204 ? 1_555 O ? L HOH . ? A HOH 1348 ? 7_555 149.4 ? 22 O ? L HOH . ? A HOH 1347 ? 7_555 ZN ? E ZN . ? A ZN 1204 ? 1_555 O ? L HOH . ? A HOH 1348 ? 7_555 109.9 ? 23 OE2 ? A GLU 101 ? A GLU 1140 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 OE1 ? A GLU 105 ? A GLU 1144 ? 1_555 107.7 ? 24 OE2 ? A GLU 101 ? A GLU 1140 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 O ? I ACT . ? A ACT 1208 ? 1_555 148.6 ? 25 OE1 ? A GLU 105 ? A GLU 1144 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 O ? I ACT . ? A ACT 1208 ? 1_555 92.3 ? 26 OE2 ? A GLU 101 ? A GLU 1140 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 OXT ? I ACT . ? A ACT 1208 ? 1_555 96.6 ? 27 OE1 ? A GLU 105 ? A GLU 1144 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 OXT ? I ACT . ? A ACT 1208 ? 1_555 90.5 ? 28 O ? I ACT . ? A ACT 1208 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 OXT ? I ACT . ? A ACT 1208 ? 1_555 58.4 ? 29 OE2 ? A GLU 101 ? A GLU 1140 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 O ? L HOH . ? A HOH 1333 ? 1_555 99.5 ? 30 OE1 ? A GLU 105 ? A GLU 1144 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 O ? L HOH . ? A HOH 1333 ? 1_555 138.5 ? 31 O ? I ACT . ? A ACT 1208 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 O ? L HOH . ? A HOH 1333 ? 1_555 79.1 ? 32 OXT ? I ACT . ? A ACT 1208 ? 1_555 ZN ? D ZN . ? A ZN 1203 ? 1_555 O ? L HOH . ? A HOH 1333 ? 1_555 117.2 ? 33 SG ? A CYS 102 ? A CYS 1141 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 OE2 ? A GLU 105 ? A GLU 1144 ? 1_555 116.7 ? 34 SG ? A CYS 102 ? A CYS 1141 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 OXT ? H ACT . ? A ACT 1207 ? 1_555 124.2 ? 35 OE2 ? A GLU 105 ? A GLU 1144 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 OXT ? H ACT . ? A ACT 1207 ? 1_555 102.3 ? 36 SG ? A CYS 102 ? A CYS 1141 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 O ? L HOH . ? A HOH 1319 ? 1_555 118.5 ? 37 OE2 ? A GLU 105 ? A GLU 1144 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 O ? L HOH . ? A HOH 1319 ? 1_555 83.1 ? 38 OXT ? H ACT . ? A ACT 1207 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 O ? L HOH . ? A HOH 1319 ? 1_555 103.7 ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 40 ? VAL A 41 ? ALA A 1079 VAL A 1080 AA1 2 LYS A 44 ? PRO A 45 ? LYS A 1083 PRO A 1084 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id VAL _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 41 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 1080 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id LYS _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 44 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id LYS _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 1083 # _pdbx_entry_details.entry_id 9YBW _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 1333 ? ? O A HOH 1344 ? ? 1.39 2 1 O A HOH 1339 ? ? O A HOH 1346 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 1347 ? ? 1_555 O A HOH 1351 ? ? 7_555 1.91 2 1 O A HOH 1351 ? ? 1_555 O A HOH 1351 ? ? 7_555 2.07 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ZN 1202 ? C ZN . 2 1 A HOH 1340 ? L HOH . # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z 3 y+1/2,-x+1/2,z 4 x+1/2,-y+1/2,-z 5 -x+1/2,y+1/2,-z 6 -x,-y,z 7 y,x,-z 8 -y,-x,-z # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 5.88339873054 25.0520054815 9.1237046779 0.369801091488 ? 0.0132327839189 ? -0.0518913995019 ? 0.267867920295 ? 0.0565331063812 ? 0.424911109612 ? 7.96619264649 ? -3.43583539319 ? 0.0253154980644 ? 3.26874704757 ? -1.17723833431 ? 6.77245368532 ? -0.177071007159 ? -1.07016752961 ? -0.936028036838 ? 0.932723647285 ? 0.215506933113 ? 0.132131812637 ? 0.774380749634 ? 0.113162563689 ? -0.0187043448413 ? 2 'X-RAY DIFFRACTION' ? refined 3.60028082539 28.0262581284 -3.7096756938 0.409967571427 ? 0.0463354189722 ? -0.0475633007035 ? 0.476501843871 ? -0.0419962317531 ? 0.502802105144 ? 1.10487326396 ? -0.065332633651 ? -0.617880207521 ? 0.830858637073 ? 0.0222822276837 ? 0.329119508054 ? 0.32191344333 ? 0.994524086731 ? 0.30689258173 ? -0.482153027897 ? -0.20208135164 ? -0.0732502485525 ? -0.10047335863 ? -0.584935791568 ? -0.0947598944783 ? 3 'X-RAY DIFFRACTION' ? refined 16.913952453 25.0716534289 1.93238860287 0.236241381451 ? 0.0507518773923 ? -0.00174575444652 ? 0.266157492782 ? -0.00597285035204 ? 0.196337367818 ? 9.19044385404 ? -1.52520909312 ? -1.885873552 ? 4.16876350721 ? -0.726697321409 ? 2.77833723809 ? -0.0473072957172 ? -0.00856075086901 ? -0.156256212556 ? -0.126084935361 ? 0.254379977551 ? -0.226069288977 ? -0.0453791665344 ? 0.0673885835822 ? -0.0154692025742 ? 4 'X-RAY DIFFRACTION' ? refined 16.2450592157 31.4063946937 -1.63990855003 0.202820287957 ? 0.0480708438766 ? -0.0267326975253 ? 0.170358798129 ? 0.0610139603069 ? 0.219206716307 ? 4.5141509224 ? -0.966224378261 ? -0.438220500995 ? 5.82778565482 ? 1.89494624421 ? 5.80238271661 ? 0.158849281986 ? 0.166678788481 ? 0.0211691300172 ? -0.224820757878 ? -0.0676221257661 ? -0.243591903006 ? 0.0759229858621 ? 0.226578902704 ? -0.0218138429686 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A 1 A 1053 ? A 17 A 1069 ? ? ;chain 'A' and (resid 1053 through 1069 ) ; 2 'X-RAY DIFFRACTION' 2 A 18 A 1070 ? A 34 A 1086 ? ? ;chain 'A' and (resid 1070 through 1086 ) ; 3 'X-RAY DIFFRACTION' 3 A 35 A 1087 ? A 45 A 1097 ? ? ;chain 'A' and (resid 1087 through 1097 ) ; 4 'X-RAY DIFFRACTION' 4 A 46 A 1098 ? A 100 A 1152 ? ? ;chain 'A' and (resid 1098 through 1152 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1040 ? A GLY 1 2 1 Y 1 A GLY 1041 ? A GLY 2 3 1 Y 1 A GLU 1042 ? A GLU 3 4 1 Y 1 A LYS 1043 ? A LYS 4 5 1 Y 1 A ILE 1044 ? A ILE 5 6 1 Y 1 A THR 1045 ? A THR 6 7 1 Y 1 A LYS 1046 ? A LYS 7 8 1 Y 1 A VAL 1047 ? A VAL 8 9 1 Y 1 A TYR 1048 ? A TYR 9 10 1 Y 1 A GLU 1049 ? A GLU 10 11 1 Y 1 A LEU 1050 ? A LEU 11 12 1 Y 1 A GLY 1051 ? A GLY 12 13 1 Y 1 A ASN 1052 ? A ASN 13 14 1 Y 1 A VAL 1153 ? A VAL 114 15 1 Y 1 A PHE 1154 ? A PHE 115 16 1 Y 1 A SER 1155 ? A SER 116 17 1 Y 1 A THR 1156 ? A THR 117 18 1 Y 1 A GLY 1157 ? A GLY 118 19 1 Y 1 A ASP 1158 ? A ASP 119 20 1 Y 1 A THR 1159 ? A THR 120 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1CUA N1 N N N 1 A1CUA N3 N Y N 2 A1CUA C4 C N N 3 A1CUA C5 C N N 4 A1CUA C6 C N N 5 A1CUA C7 C N N 6 A1CUA C8 C Y N 7 A1CUA C10 C Y N 8 A1CUA C13 C N N 9 A1CUA C15 C N N 10 A1CUA C1 C N N 11 A1CUA C11 C Y N 12 A1CUA C12 C Y N 13 A1CUA C14 C N N 14 A1CUA C16 C N N 15 A1CUA C2 C N N 16 A1CUA C3 C N N 17 A1CUA C9 C Y N 18 A1CUA F1 F N N 19 A1CUA F2 F N N 20 A1CUA F3 F N N 21 A1CUA N2 N N N 22 A1CUA N4 N N N 23 A1CUA O1 O N N 24 A1CUA O2 O N N 25 A1CUA H2 H N N 26 A1CUA H4 H N N 27 A1CUA H7 H N N 28 A1CUA H6 H N N 29 A1CUA H11 H N N 30 A1CUA H10 H N N 31 A1CUA H5 H N N 32 A1CUA H9 H N N 33 A1CUA H8 H N N 34 A1CUA H12 H N N 35 A1CUA H13 H N N 36 A1CUA H1 H N N 37 A1CUA H3 H N N 38 ACT C C N N 39 ACT O O N N 40 ACT OXT O N N 41 ACT CH3 C N N 42 ACT H1 H N N 43 ACT H2 H N N 44 ACT H3 H N N 45 ALA N N N N 46 ALA CA C N S 47 ALA C C N N 48 ALA O O N N 49 ALA CB C N N 50 ALA OXT O N N 51 ALA H H N N 52 ALA H2 H N N 53 ALA HA H N N 54 ALA HB1 H N N 55 ALA HB2 H N N 56 ALA HB3 H N N 57 ALA HXT H N N 58 ARG N N N N 59 ARG CA C N S 60 ARG C C N N 61 ARG O O N N 62 ARG CB C N N 63 ARG CG C N N 64 ARG CD C N N 65 ARG NE N N N 66 ARG CZ C N N 67 ARG NH1 N N N 68 ARG NH2 N N N 69 ARG OXT O N N 70 ARG H H N N 71 ARG H2 H N N 72 ARG HA H N N 73 ARG HB2 H N N 74 ARG HB3 H N N 75 ARG HG2 H N N 76 ARG HG3 H N N 77 ARG HD2 H N N 78 ARG HD3 H N N 79 ARG HE H N N 80 ARG HH11 H N N 81 ARG HH12 H N N 82 ARG HH21 H N N 83 ARG HH22 H N N 84 ARG HXT H N N 85 ASN N N N N 86 ASN CA C N S 87 ASN C C N N 88 ASN O O N N 89 ASN CB C N N 90 ASN CG C N N 91 ASN OD1 O N N 92 ASN ND2 N N N 93 ASN OXT O N N 94 ASN H H N N 95 ASN H2 H N N 96 ASN HA H N N 97 ASN HB2 H N N 98 ASN HB3 H N N 99 ASN HD21 H N N 100 ASN HD22 H N N 101 ASN HXT H N N 102 ASP N N N N 103 ASP CA C N S 104 ASP C C N N 105 ASP O O N N 106 ASP CB C N N 107 ASP CG C N N 108 ASP OD1 O N N 109 ASP OD2 O N N 110 ASP OXT O N N 111 ASP H H N N 112 ASP H2 H N N 113 ASP HA H N N 114 ASP HB2 H N N 115 ASP HB3 H N N 116 ASP HD2 H N N 117 ASP HXT H N N 118 CYS N N N N 119 CYS CA C N R 120 CYS C C N N 121 CYS O O N N 122 CYS CB C N N 123 CYS SG S N N 124 CYS OXT O N N 125 CYS H H N N 126 CYS H2 H N N 127 CYS HA H N N 128 CYS HB2 H N N 129 CYS HB3 H N N 130 CYS HG H N N 131 CYS HXT H N N 132 GLN N N N N 133 GLN CA C N S 134 GLN C C N N 135 GLN O O N N 136 GLN CB C N N 137 GLN CG C N N 138 GLN CD C N N 139 GLN OE1 O N N 140 GLN NE2 N N N 141 GLN OXT O N N 142 GLN H H N N 143 GLN H2 H N N 144 GLN HA H N N 145 GLN HB2 H N N 146 GLN HB3 H N N 147 GLN HG2 H N N 148 GLN HG3 H N N 149 GLN HE21 H N N 150 GLN HE22 H N N 151 GLN HXT H N N 152 GLU N N N N 153 GLU CA C N S 154 GLU C C N N 155 GLU O O N N 156 GLU CB C N N 157 GLU CG C N N 158 GLU CD C N N 159 GLU OE1 O N N 160 GLU OE2 O N N 161 GLU OXT O N N 162 GLU H H N N 163 GLU H2 H N N 164 GLU HA H N N 165 GLU HB2 H N N 166 GLU HB3 H N N 167 GLU HG2 H N N 168 GLU HG3 H N N 169 GLU HE2 H N N 170 GLU HXT H N N 171 GLY N N N N 172 GLY CA C N N 173 GLY C C N N 174 GLY O O N N 175 GLY OXT O N N 176 GLY H H N N 177 GLY H2 H N N 178 GLY HA2 H N N 179 GLY HA3 H N N 180 GLY HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 SER N N N N 314 SER CA C N S 315 SER C C N N 316 SER O O N N 317 SER CB C N N 318 SER OG O N N 319 SER OXT O N N 320 SER H H N N 321 SER H2 H N N 322 SER HA H N N 323 SER HB2 H N N 324 SER HB3 H N N 325 SER HG H N N 326 SER HXT H N N 327 THR N N N N 328 THR CA C N S 329 THR C C N N 330 THR O O N N 331 THR CB C N R 332 THR OG1 O N N 333 THR CG2 C N N 334 THR OXT O N N 335 THR H H N N 336 THR H2 H N N 337 THR HA H N N 338 THR HB H N N 339 THR HG1 H N N 340 THR HG21 H N N 341 THR HG22 H N N 342 THR HG23 H N N 343 THR HXT H N N 344 TRP N N N N 345 TRP CA C N S 346 TRP C C N N 347 TRP O O N N 348 TRP CB C N N 349 TRP CG C Y N 350 TRP CD1 C Y N 351 TRP CD2 C Y N 352 TRP NE1 N Y N 353 TRP CE2 C Y N 354 TRP CE3 C Y N 355 TRP CZ2 C Y N 356 TRP CZ3 C Y N 357 TRP CH2 C Y N 358 TRP OXT O N N 359 TRP H H N N 360 TRP H2 H N N 361 TRP HA H N N 362 TRP HB2 H N N 363 TRP HB3 H N N 364 TRP HD1 H N N 365 TRP HE1 H N N 366 TRP HE3 H N N 367 TRP HZ2 H N N 368 TRP HZ3 H N N 369 TRP HH2 H N N 370 TRP HXT H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 ZN ZN ZN N N 415 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CUA F1 C1 sing N N 1 A1CUA C1 F2 sing N N 2 A1CUA C1 F3 sing N N 3 A1CUA C1 C2 sing N N 4 A1CUA C2 C3 sing N N 5 A1CUA C2 C6 doub N N 6 A1CUA C3 C4 doub N N 7 A1CUA C4 N1 sing N N 8 A1CUA C4 C8 sing N N 9 A1CUA N1 C5 sing N N 10 A1CUA C5 O1 doub N N 11 A1CUA C5 C6 sing N N 12 A1CUA C6 C7 sing N N 13 A1CUA C7 N2 trip N N 14 A1CUA C8 C9 doub Y N 15 A1CUA C8 C12 sing Y N 16 A1CUA C9 C10 sing Y N 17 A1CUA C10 C11 doub Y N 18 A1CUA C11 N3 sing Y N 19 A1CUA N3 C12 doub Y N 20 A1CUA C12 N4 sing N N 21 A1CUA N4 C13 sing N N 22 A1CUA N4 C16 sing N N 23 A1CUA C13 C14 sing N N 24 A1CUA C14 O2 sing N N 25 A1CUA O2 C15 sing N N 26 A1CUA C15 C16 sing N N 27 A1CUA N1 H2 sing N N 28 A1CUA C10 H4 sing N N 29 A1CUA C13 H7 sing N N 30 A1CUA C13 H6 sing N N 31 A1CUA C15 H11 sing N N 32 A1CUA C15 H10 sing N N 33 A1CUA C11 H5 sing N N 34 A1CUA C14 H9 sing N N 35 A1CUA C14 H8 sing N N 36 A1CUA C16 H12 sing N N 37 A1CUA C16 H13 sing N N 38 A1CUA C3 H1 sing N N 39 A1CUA C9 H3 sing N N 40 ACT C O doub N N 41 ACT C OXT sing N N 42 ACT C CH3 sing N N 43 ACT CH3 H1 sing N N 44 ACT CH3 H2 sing N N 45 ACT CH3 H3 sing N N 46 ALA N CA sing N N 47 ALA N H sing N N 48 ALA N H2 sing N N 49 ALA CA C sing N N 50 ALA CA CB sing N N 51 ALA CA HA sing N N 52 ALA C O doub N N 53 ALA C OXT sing N N 54 ALA CB HB1 sing N N 55 ALA CB HB2 sing N N 56 ALA CB HB3 sing N N 57 ALA OXT HXT sing N N 58 ARG N CA sing N N 59 ARG N H sing N N 60 ARG N H2 sing N N 61 ARG CA C sing N N 62 ARG CA CB sing N N 63 ARG CA HA sing N N 64 ARG C O doub N N 65 ARG C OXT sing N N 66 ARG CB CG sing N N 67 ARG CB HB2 sing N N 68 ARG CB HB3 sing N N 69 ARG CG CD sing N N 70 ARG CG HG2 sing N N 71 ARG CG HG3 sing N N 72 ARG CD NE sing N N 73 ARG CD HD2 sing N N 74 ARG CD HD3 sing N N 75 ARG NE CZ sing N N 76 ARG NE HE sing N N 77 ARG CZ NH1 sing N N 78 ARG CZ NH2 doub N N 79 ARG NH1 HH11 sing N N 80 ARG NH1 HH12 sing N N 81 ARG NH2 HH21 sing N N 82 ARG NH2 HH22 sing N N 83 ARG OXT HXT sing N N 84 ASN N CA sing N N 85 ASN N H sing N N 86 ASN N H2 sing N N 87 ASN CA C sing N N 88 ASN CA CB sing N N 89 ASN CA HA sing N N 90 ASN C O doub N N 91 ASN C OXT sing N N 92 ASN CB CG sing N N 93 ASN CB HB2 sing N N 94 ASN CB HB3 sing N N 95 ASN CG OD1 doub N N 96 ASN CG ND2 sing N N 97 ASN ND2 HD21 sing N N 98 ASN ND2 HD22 sing N N 99 ASN OXT HXT sing N N 100 ASP N CA sing N N 101 ASP N H sing N N 102 ASP N H2 sing N N 103 ASP CA C sing N N 104 ASP CA CB sing N N 105 ASP CA HA sing N N 106 ASP C O doub N N 107 ASP C OXT sing N N 108 ASP CB CG sing N N 109 ASP CB HB2 sing N N 110 ASP CB HB3 sing N N 111 ASP CG OD1 doub N N 112 ASP CG OD2 sing N N 113 ASP OD2 HD2 sing N N 114 ASP OXT HXT sing N N 115 CYS N CA sing N N 116 CYS N H sing N N 117 CYS N H2 sing N N 118 CYS CA C sing N N 119 CYS CA CB sing N N 120 CYS CA HA sing N N 121 CYS C O doub N N 122 CYS C OXT sing N N 123 CYS CB SG sing N N 124 CYS CB HB2 sing N N 125 CYS CB HB3 sing N N 126 CYS SG HG sing N N 127 CYS OXT HXT sing N N 128 GLN N CA sing N N 129 GLN N H sing N N 130 GLN N H2 sing N N 131 GLN CA C sing N N 132 GLN CA CB sing N N 133 GLN CA HA sing N N 134 GLN C O doub N N 135 GLN C OXT sing N N 136 GLN CB CG sing N N 137 GLN CB HB2 sing N N 138 GLN CB HB3 sing N N 139 GLN CG CD sing N N 140 GLN CG HG2 sing N N 141 GLN CG HG3 sing N N 142 GLN CD OE1 doub N N 143 GLN CD NE2 sing N N 144 GLN NE2 HE21 sing N N 145 GLN NE2 HE22 sing N N 146 GLN OXT HXT sing N N 147 GLU N CA sing N N 148 GLU N H sing N N 149 GLU N H2 sing N N 150 GLU CA C sing N N 151 GLU CA CB sing N N 152 GLU CA HA sing N N 153 GLU C O doub N N 154 GLU C OXT sing N N 155 GLU CB CG sing N N 156 GLU CB HB2 sing N N 157 GLU CB HB3 sing N N 158 GLU CG CD sing N N 159 GLU CG HG2 sing N N 160 GLU CG HG3 sing N N 161 GLU CD OE1 doub N N 162 GLU CD OE2 sing N N 163 GLU OE2 HE2 sing N N 164 GLU OXT HXT sing N N 165 GLY N CA sing N N 166 GLY N H sing N N 167 GLY N H2 sing N N 168 GLY CA C sing N N 169 GLY CA HA2 sing N N 170 GLY CA HA3 sing N N 171 GLY C O doub N N 172 GLY C OXT sing N N 173 GLY OXT HXT sing N N 174 HOH O H1 sing N N 175 HOH O H2 sing N N 176 ILE N CA sing N N 177 ILE N H sing N N 178 ILE N H2 sing N N 179 ILE CA C sing N N 180 ILE CA CB sing N N 181 ILE CA HA sing N N 182 ILE C O doub N N 183 ILE C OXT sing N N 184 ILE CB CG1 sing N N 185 ILE CB CG2 sing N N 186 ILE CB HB sing N N 187 ILE CG1 CD1 sing N N 188 ILE CG1 HG12 sing N N 189 ILE CG1 HG13 sing N N 190 ILE CG2 HG21 sing N N 191 ILE CG2 HG22 sing N N 192 ILE CG2 HG23 sing N N 193 ILE CD1 HD11 sing N N 194 ILE CD1 HD12 sing N N 195 ILE CD1 HD13 sing N N 196 ILE OXT HXT sing N N 197 LEU N CA sing N N 198 LEU N H sing N N 199 LEU N H2 sing N N 200 LEU CA C sing N N 201 LEU CA CB sing N N 202 LEU CA HA sing N N 203 LEU C O doub N N 204 LEU C OXT sing N N 205 LEU CB CG sing N N 206 LEU CB HB2 sing N N 207 LEU CB HB3 sing N N 208 LEU CG CD1 sing N N 209 LEU CG CD2 sing N N 210 LEU CG HG sing N N 211 LEU CD1 HD11 sing N N 212 LEU CD1 HD12 sing N N 213 LEU CD1 HD13 sing N N 214 LEU CD2 HD21 sing N N 215 LEU CD2 HD22 sing N N 216 LEU CD2 HD23 sing N N 217 LEU OXT HXT sing N N 218 LYS N CA sing N N 219 LYS N H sing N N 220 LYS N H2 sing N N 221 LYS CA C sing N N 222 LYS CA CB sing N N 223 LYS CA HA sing N N 224 LYS C O doub N N 225 LYS C OXT sing N N 226 LYS CB CG sing N N 227 LYS CB HB2 sing N N 228 LYS CB HB3 sing N N 229 LYS CG CD sing N N 230 LYS CG HG2 sing N N 231 LYS CG HG3 sing N N 232 LYS CD CE sing N N 233 LYS CD HD2 sing N N 234 LYS CD HD3 sing N N 235 LYS CE NZ sing N N 236 LYS CE HE2 sing N N 237 LYS CE HE3 sing N N 238 LYS NZ HZ1 sing N N 239 LYS NZ HZ2 sing N N 240 LYS NZ HZ3 sing N N 241 LYS OXT HXT sing N N 242 MET N CA sing N N 243 MET N H sing N N 244 MET N H2 sing N N 245 MET CA C sing N N 246 MET CA CB sing N N 247 MET CA HA sing N N 248 MET C O doub N N 249 MET C OXT sing N N 250 MET CB CG sing N N 251 MET CB HB2 sing N N 252 MET CB HB3 sing N N 253 MET CG SD sing N N 254 MET CG HG2 sing N N 255 MET CG HG3 sing N N 256 MET SD CE sing N N 257 MET CE HE1 sing N N 258 MET CE HE2 sing N N 259 MET CE HE3 sing N N 260 MET OXT HXT sing N N 261 PHE N CA sing N N 262 PHE N H sing N N 263 PHE N H2 sing N N 264 PHE CA C sing N N 265 PHE CA CB sing N N 266 PHE CA HA sing N N 267 PHE C O doub N N 268 PHE C OXT sing N N 269 PHE CB CG sing N N 270 PHE CB HB2 sing N N 271 PHE CB HB3 sing N N 272 PHE CG CD1 doub Y N 273 PHE CG CD2 sing Y N 274 PHE CD1 CE1 sing Y N 275 PHE CD1 HD1 sing N N 276 PHE CD2 CE2 doub Y N 277 PHE CD2 HD2 sing N N 278 PHE CE1 CZ doub Y N 279 PHE CE1 HE1 sing N N 280 PHE CE2 CZ sing Y N 281 PHE CE2 HE2 sing N N 282 PHE CZ HZ sing N N 283 PHE OXT HXT sing N N 284 PRO N CA sing N N 285 PRO N CD sing N N 286 PRO N H sing N N 287 PRO CA C sing N N 288 PRO CA CB sing N N 289 PRO CA HA sing N N 290 PRO C O doub N N 291 PRO C OXT sing N N 292 PRO CB CG sing N N 293 PRO CB HB2 sing N N 294 PRO CB HB3 sing N N 295 PRO CG CD sing N N 296 PRO CG HG2 sing N N 297 PRO CG HG3 sing N N 298 PRO CD HD2 sing N N 299 PRO CD HD3 sing N N 300 PRO OXT HXT sing N N 301 SER N CA sing N N 302 SER N H sing N N 303 SER N H2 sing N N 304 SER CA C sing N N 305 SER CA CB sing N N 306 SER CA HA sing N N 307 SER C O doub N N 308 SER C OXT sing N N 309 SER CB OG sing N N 310 SER CB HB2 sing N N 311 SER CB HB3 sing N N 312 SER OG HG sing N N 313 SER OXT HXT sing N N 314 THR N CA sing N N 315 THR N H sing N N 316 THR N H2 sing N N 317 THR CA C sing N N 318 THR CA CB sing N N 319 THR CA HA sing N N 320 THR C O doub N N 321 THR C OXT sing N N 322 THR CB OG1 sing N N 323 THR CB CG2 sing N N 324 THR CB HB sing N N 325 THR OG1 HG1 sing N N 326 THR CG2 HG21 sing N N 327 THR CG2 HG22 sing N N 328 THR CG2 HG23 sing N N 329 THR OXT HXT sing N N 330 TRP N CA sing N N 331 TRP N H sing N N 332 TRP N H2 sing N N 333 TRP CA C sing N N 334 TRP CA CB sing N N 335 TRP CA HA sing N N 336 TRP C O doub N N 337 TRP C OXT sing N N 338 TRP CB CG sing N N 339 TRP CB HB2 sing N N 340 TRP CB HB3 sing N N 341 TRP CG CD1 doub Y N 342 TRP CG CD2 sing Y N 343 TRP CD1 NE1 sing Y N 344 TRP CD1 HD1 sing N N 345 TRP CD2 CE2 doub Y N 346 TRP CD2 CE3 sing Y N 347 TRP NE1 CE2 sing Y N 348 TRP NE1 HE1 sing N N 349 TRP CE2 CZ2 sing Y N 350 TRP CE3 CZ3 doub Y N 351 TRP CE3 HE3 sing N N 352 TRP CZ2 CH2 doub Y N 353 TRP CZ2 HZ2 sing N N 354 TRP CZ3 CH2 sing Y N 355 TRP CZ3 HZ3 sing N N 356 TRP CH2 HH2 sing N N 357 TRP OXT HXT sing N N 358 TYR N CA sing N N 359 TYR N H sing N N 360 TYR N H2 sing N N 361 TYR CA C sing N N 362 TYR CA CB sing N N 363 TYR CA HA sing N N 364 TYR C O doub N N 365 TYR C OXT sing N N 366 TYR CB CG sing N N 367 TYR CB HB2 sing N N 368 TYR CB HB3 sing N N 369 TYR CG CD1 doub Y N 370 TYR CG CD2 sing Y N 371 TYR CD1 CE1 sing Y N 372 TYR CD1 HD1 sing N N 373 TYR CD2 CE2 doub Y N 374 TYR CD2 HD2 sing N N 375 TYR CE1 CZ doub Y N 376 TYR CE1 HE1 sing N N 377 TYR CE2 CZ sing Y N 378 TYR CE2 HE2 sing N N 379 TYR CZ OH sing N N 380 TYR OH HH sing N N 381 TYR OXT HXT sing N N 382 VAL N CA sing N N 383 VAL N H sing N N 384 VAL N H2 sing N N 385 VAL CA C sing N N 386 VAL CA CB sing N N 387 VAL CA HA sing N N 388 VAL C O doub N N 389 VAL C OXT sing N N 390 VAL CB CG1 sing N N 391 VAL CB CG2 sing N N 392 VAL CB HB sing N N 393 VAL CG1 HG11 sing N N 394 VAL CG1 HG12 sing N N 395 VAL CG1 HG13 sing N N 396 VAL CG2 HG21 sing N N 397 VAL CG2 HG22 sing N N 398 VAL CG2 HG23 sing N N 399 VAL OXT HXT sing N N 400 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'Internal model' # _space_group.name_H-M_alt 'P 4 21 2' _space_group.name_Hall 'P 4ab 2ab' _space_group.IT_number 90 _space_group.crystal_system tetragonal _space_group.id 1 # _atom_sites.entry_id 9YBW _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.011072 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011072 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026497 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? F ? ? 4.90428 4.07044 ? ? 12.99538 1.63651 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? ZN ? ? 24.64596 5.25405 ? ? 2.14387 29.76375 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #