data_9YSF # _entry.id 9YSF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.410 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9YSF pdb_00009ysf 10.2210/pdb9ysf/pdb WWPDB D_1000300615 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-03-18 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9YSF _pdbx_database_status.recvd_initial_deposition_date 2025-10-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email jtainer@mdanderson.org _pdbx_contact_author.name_first John _pdbx_contact_author.name_last Tainer _pdbx_contact_author.name_mi A _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1659-2429 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shen, R.' 1 ? 'Arvai, A.S.' 2 ? 'Brosey, C.A.' 3 ? 'Tsutakawa, S.E.' 4 ? 'Tainer, J.A.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'EEPD1 evolved a unique DNA clamping dimer protecting reversed replication forks' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkag188 _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shen, R.' 1 ? primary 'Sarker, A.H.' 2 ? primary 'Chen, Y.' 3 ? primary 'Liu, M.' 4 ? primary 'Roy, S.' 5 ? primary 'Arvai, A.S.' 6 ? primary 'Bacolla, A.' 7 ? primary 'Ahmed, Z.' 8 ? primary 'Katsonis, P.' 9 ? primary 'Hammel, M.' 10 ? primary 'Kuraoka, I.' 11 ? primary 'Tsai, M.' 12 ? primary 'Irie, C.' 13 ? primary 'Webb, L.' 14 ? primary 'Lichtarge, O.' 15 ? primary 'Tsai, C.' 16 ? primary 'Tsutakawa, S.E.' 17 ? primary 'Schlacher, K.' 18 ? primary 'Tainer, J.A.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Endonuclease/exonuclease/phosphatase family domain-containing protein 1' 32311.578 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 3 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 6 water nat water 18.015 165 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPMTRDGRPVLRLATWNLQGCSVEKANNPGVREVVCMTLLENSIKLLAVQELLDREALEKFCTELNQPTLPNIRKWKGPR GCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQESSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTL LGSENPSKNHSDGHRLASFAQTLQETLKGEKDVIILGDFGQGPDSNDYDILRKEKFHHLIPAHTFTNISTKNPQGSKSLD NIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEFYTEKD ; _entity_poly.pdbx_seq_one_letter_code_can ;GPMTRDGRPVLRLATWNLQGCSVEKANNPGVREVVCMTLLENSIKLLAVQELLDREALEKFCTELNQPTLPNIRKWKGPR GCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQESSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTL LGSENPSKNHSDGHRLASFAQTLQETLKGEKDVIILGDFGQGPDSNDYDILRKEKFHHLIPAHTFTNISTKNPQGSKSLD NIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEFYTEKD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 4 'MAGNESIUM ION' MG 5 'CHLORIDE ION' CL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 MET n 1 4 THR n 1 5 ARG n 1 6 ASP n 1 7 GLY n 1 8 ARG n 1 9 PRO n 1 10 VAL n 1 11 LEU n 1 12 ARG n 1 13 LEU n 1 14 ALA n 1 15 THR n 1 16 TRP n 1 17 ASN n 1 18 LEU n 1 19 GLN n 1 20 GLY n 1 21 CYS n 1 22 SER n 1 23 VAL n 1 24 GLU n 1 25 LYS n 1 26 ALA n 1 27 ASN n 1 28 ASN n 1 29 PRO n 1 30 GLY n 1 31 VAL n 1 32 ARG n 1 33 GLU n 1 34 VAL n 1 35 VAL n 1 36 CYS n 1 37 MET n 1 38 THR n 1 39 LEU n 1 40 LEU n 1 41 GLU n 1 42 ASN n 1 43 SER n 1 44 ILE n 1 45 LYS n 1 46 LEU n 1 47 LEU n 1 48 ALA n 1 49 VAL n 1 50 GLN n 1 51 GLU n 1 52 LEU n 1 53 LEU n 1 54 ASP n 1 55 ARG n 1 56 GLU n 1 57 ALA n 1 58 LEU n 1 59 GLU n 1 60 LYS n 1 61 PHE n 1 62 CYS n 1 63 THR n 1 64 GLU n 1 65 LEU n 1 66 ASN n 1 67 GLN n 1 68 PRO n 1 69 THR n 1 70 LEU n 1 71 PRO n 1 72 ASN n 1 73 ILE n 1 74 ARG n 1 75 LYS n 1 76 TRP n 1 77 LYS n 1 78 GLY n 1 79 PRO n 1 80 ARG n 1 81 GLY n 1 82 CYS n 1 83 TRP n 1 84 LYS n 1 85 ALA n 1 86 VAL n 1 87 VAL n 1 88 ALA n 1 89 GLU n 1 90 LYS n 1 91 PRO n 1 92 SER n 1 93 ASN n 1 94 GLN n 1 95 LEU n 1 96 GLN n 1 97 LYS n 1 98 GLY n 1 99 ALA n 1 100 GLY n 1 101 TYR n 1 102 ALA n 1 103 GLY n 1 104 PHE n 1 105 LEU n 1 106 TRP n 1 107 ASP n 1 108 ALA n 1 109 ALA n 1 110 ALA n 1 111 GLY n 1 112 MET n 1 113 GLU n 1 114 LEU n 1 115 ARG n 1 116 ASP n 1 117 ALA n 1 118 GLY n 1 119 SER n 1 120 GLN n 1 121 GLU n 1 122 SER n 1 123 SER n 1 124 PRO n 1 125 SER n 1 126 ASN n 1 127 GLY n 1 128 HIS n 1 129 GLY n 1 130 LYS n 1 131 LEU n 1 132 ALA n 1 133 GLY n 1 134 PRO n 1 135 SER n 1 136 PRO n 1 137 TYR n 1 138 LEU n 1 139 GLY n 1 140 ARG n 1 141 PHE n 1 142 LYS n 1 143 VAL n 1 144 GLY n 1 145 SER n 1 146 HIS n 1 147 ASP n 1 148 LEU n 1 149 THR n 1 150 LEU n 1 151 VAL n 1 152 ASN n 1 153 LEU n 1 154 HIS n 1 155 LEU n 1 156 ALA n 1 157 ALA n 1 158 LEU n 1 159 THR n 1 160 LEU n 1 161 LEU n 1 162 GLY n 1 163 SER n 1 164 GLU n 1 165 ASN n 1 166 PRO n 1 167 SER n 1 168 LYS n 1 169 ASN n 1 170 HIS n 1 171 SER n 1 172 ASP n 1 173 GLY n 1 174 HIS n 1 175 ARG n 1 176 LEU n 1 177 ALA n 1 178 SER n 1 179 PHE n 1 180 ALA n 1 181 GLN n 1 182 THR n 1 183 LEU n 1 184 GLN n 1 185 GLU n 1 186 THR n 1 187 LEU n 1 188 LYS n 1 189 GLY n 1 190 GLU n 1 191 LYS n 1 192 ASP n 1 193 VAL n 1 194 ILE n 1 195 ILE n 1 196 LEU n 1 197 GLY n 1 198 ASP n 1 199 PHE n 1 200 GLY n 1 201 GLN n 1 202 GLY n 1 203 PRO n 1 204 ASP n 1 205 SER n 1 206 ASN n 1 207 ASP n 1 208 TYR n 1 209 ASP n 1 210 ILE n 1 211 LEU n 1 212 ARG n 1 213 LYS n 1 214 GLU n 1 215 LYS n 1 216 PHE n 1 217 HIS n 1 218 HIS n 1 219 LEU n 1 220 ILE n 1 221 PRO n 1 222 ALA n 1 223 HIS n 1 224 THR n 1 225 PHE n 1 226 THR n 1 227 ASN n 1 228 ILE n 1 229 SER n 1 230 THR n 1 231 LYS n 1 232 ASN n 1 233 PRO n 1 234 GLN n 1 235 GLY n 1 236 SER n 1 237 LYS n 1 238 SER n 1 239 LEU n 1 240 ASP n 1 241 ASN n 1 242 ILE n 1 243 TRP n 1 244 ILE n 1 245 SER n 1 246 LYS n 1 247 SER n 1 248 LEU n 1 249 LYS n 1 250 LYS n 1 251 VAL n 1 252 PHE n 1 253 THR n 1 254 GLY n 1 255 HIS n 1 256 TRP n 1 257 ALA n 1 258 VAL n 1 259 VAL n 1 260 ARG n 1 261 GLU n 1 262 GLY n 1 263 LEU n 1 264 THR n 1 265 ASN n 1 266 PRO n 1 267 TRP n 1 268 ILE n 1 269 PRO n 1 270 ASP n 1 271 ASN n 1 272 TRP n 1 273 SER n 1 274 TRP n 1 275 GLY n 1 276 GLY n 1 277 VAL n 1 278 ALA n 1 279 SER n 1 280 GLU n 1 281 HIS n 1 282 CYS n 1 283 PRO n 1 284 VAL n 1 285 LEU n 1 286 ALA n 1 287 GLU n 1 288 PHE n 1 289 TYR n 1 290 THR n 1 291 GLU n 1 292 LYS n 1 293 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 293 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EEPD1, KIAA1706' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Rosetta2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 251 ? ? ? A . n A 1 2 PRO 2 252 ? ? ? A . n A 1 3 MET 3 253 253 MET MET A . n A 1 4 THR 4 254 254 THR THR A . n A 1 5 ARG 5 255 255 ARG ARG A . n A 1 6 ASP 6 256 256 ASP ASP A . n A 1 7 GLY 7 257 257 GLY GLY A . n A 1 8 ARG 8 258 258 ARG ARG A . n A 1 9 PRO 9 259 259 PRO PRO A . n A 1 10 VAL 10 260 260 VAL VAL A . n A 1 11 LEU 11 261 261 LEU LEU A . n A 1 12 ARG 12 262 262 ARG ARG A . n A 1 13 LEU 13 263 263 LEU LEU A . n A 1 14 ALA 14 264 264 ALA ALA A . n A 1 15 THR 15 265 265 THR THR A . n A 1 16 TRP 16 266 266 TRP TRP A . n A 1 17 ASN 17 267 267 ASN ASN A . n A 1 18 LEU 18 268 268 LEU LEU A . n A 1 19 GLN 19 269 269 GLN GLN A . n A 1 20 GLY 20 270 270 GLY GLY A . n A 1 21 CYS 21 271 271 CYS CYS A . n A 1 22 SER 22 272 272 SER SER A . n A 1 23 VAL 23 273 273 VAL VAL A . n A 1 24 GLU 24 274 274 GLU GLU A . n A 1 25 LYS 25 275 275 LYS LYS A . n A 1 26 ALA 26 276 276 ALA ALA A . n A 1 27 ASN 27 277 277 ASN ASN A . n A 1 28 ASN 28 278 278 ASN ASN A . n A 1 29 PRO 29 279 279 PRO PRO A . n A 1 30 GLY 30 280 280 GLY GLY A . n A 1 31 VAL 31 281 281 VAL VAL A . n A 1 32 ARG 32 282 282 ARG ARG A . n A 1 33 GLU 33 283 283 GLU GLU A . n A 1 34 VAL 34 284 284 VAL VAL A . n A 1 35 VAL 35 285 285 VAL VAL A . n A 1 36 CYS 36 286 286 CYS CYS A . n A 1 37 MET 37 287 287 MET MET A . n A 1 38 THR 38 288 288 THR THR A . n A 1 39 LEU 39 289 289 LEU LEU A . n A 1 40 LEU 40 290 290 LEU LEU A . n A 1 41 GLU 41 291 291 GLU GLU A . n A 1 42 ASN 42 292 292 ASN ASN A . n A 1 43 SER 43 293 293 SER SER A . n A 1 44 ILE 44 294 294 ILE ILE A . n A 1 45 LYS 45 295 295 LYS LYS A . n A 1 46 LEU 46 296 296 LEU LEU A . n A 1 47 LEU 47 297 297 LEU LEU A . n A 1 48 ALA 48 298 298 ALA ALA A . n A 1 49 VAL 49 299 299 VAL VAL A . n A 1 50 GLN 50 300 300 GLN GLN A . n A 1 51 GLU 51 301 301 GLU GLU A . n A 1 52 LEU 52 302 302 LEU LEU A . n A 1 53 LEU 53 303 303 LEU LEU A . n A 1 54 ASP 54 304 304 ASP ASP A . n A 1 55 ARG 55 305 305 ARG ARG A . n A 1 56 GLU 56 306 306 GLU GLU A . n A 1 57 ALA 57 307 307 ALA ALA A . n A 1 58 LEU 58 308 308 LEU LEU A . n A 1 59 GLU 59 309 309 GLU GLU A . n A 1 60 LYS 60 310 310 LYS LYS A . n A 1 61 PHE 61 311 311 PHE PHE A . n A 1 62 CYS 62 312 312 CYS CYS A . n A 1 63 THR 63 313 313 THR THR A . n A 1 64 GLU 64 314 314 GLU GLU A . n A 1 65 LEU 65 315 315 LEU LEU A . n A 1 66 ASN 66 316 316 ASN ASN A . n A 1 67 GLN 67 317 317 GLN GLN A . n A 1 68 PRO 68 318 318 PRO PRO A . n A 1 69 THR 69 319 319 THR THR A . n A 1 70 LEU 70 320 320 LEU LEU A . n A 1 71 PRO 71 321 321 PRO PRO A . n A 1 72 ASN 72 322 322 ASN ASN A . n A 1 73 ILE 73 323 323 ILE ILE A . n A 1 74 ARG 74 324 324 ARG ARG A . n A 1 75 LYS 75 325 325 LYS LYS A . n A 1 76 TRP 76 326 326 TRP TRP A . n A 1 77 LYS 77 327 327 LYS LYS A . n A 1 78 GLY 78 328 328 GLY GLY A . n A 1 79 PRO 79 329 329 PRO PRO A . n A 1 80 ARG 80 330 330 ARG ARG A . n A 1 81 GLY 81 331 331 GLY GLY A . n A 1 82 CYS 82 332 332 CYS CYS A . n A 1 83 TRP 83 333 333 TRP TRP A . n A 1 84 LYS 84 334 334 LYS LYS A . n A 1 85 ALA 85 335 335 ALA ALA A . n A 1 86 VAL 86 336 336 VAL VAL A . n A 1 87 VAL 87 337 337 VAL VAL A . n A 1 88 ALA 88 338 338 ALA ALA A . n A 1 89 GLU 89 339 339 GLU GLU A . n A 1 90 LYS 90 340 340 LYS LYS A . n A 1 91 PRO 91 341 341 PRO PRO A . n A 1 92 SER 92 342 342 SER SER A . n A 1 93 ASN 93 343 343 ASN ASN A . n A 1 94 GLN 94 344 344 GLN GLN A . n A 1 95 LEU 95 345 345 LEU LEU A . n A 1 96 GLN 96 346 346 GLN GLN A . n A 1 97 LYS 97 347 347 LYS LYS A . n A 1 98 GLY 98 348 348 GLY GLY A . n A 1 99 ALA 99 349 349 ALA ALA A . n A 1 100 GLY 100 350 350 GLY GLY A . n A 1 101 TYR 101 351 351 TYR TYR A . n A 1 102 ALA 102 352 352 ALA ALA A . n A 1 103 GLY 103 353 353 GLY GLY A . n A 1 104 PHE 104 354 354 PHE PHE A . n A 1 105 LEU 105 355 355 LEU LEU A . n A 1 106 TRP 106 356 356 TRP TRP A . n A 1 107 ASP 107 357 357 ASP ASP A . n A 1 108 ALA 108 358 358 ALA ALA A . n A 1 109 ALA 109 359 359 ALA ALA A . n A 1 110 ALA 110 360 360 ALA ALA A . n A 1 111 GLY 111 361 361 GLY GLY A . n A 1 112 MET 112 362 362 MET MET A . n A 1 113 GLU 113 363 363 GLU GLU A . n A 1 114 LEU 114 364 364 LEU LEU A . n A 1 115 ARG 115 365 365 ARG ARG A . n A 1 116 ASP 116 366 366 ASP ASP A . n A 1 117 ALA 117 367 367 ALA ALA A . n A 1 118 GLY 118 368 368 GLY GLY A . n A 1 119 SER 119 369 369 SER SER A . n A 1 120 GLN 120 370 370 GLN GLN A . n A 1 121 GLU 121 371 ? ? ? A . n A 1 122 SER 122 372 ? ? ? A . n A 1 123 SER 123 373 ? ? ? A . n A 1 124 PRO 124 374 ? ? ? A . n A 1 125 SER 125 375 ? ? ? A . n A 1 126 ASN 126 376 ? ? ? A . n A 1 127 GLY 127 377 ? ? ? A . n A 1 128 HIS 128 378 ? ? ? A . n A 1 129 GLY 129 379 ? ? ? A . n A 1 130 LYS 130 380 ? ? ? A . n A 1 131 LEU 131 381 ? ? ? A . n A 1 132 ALA 132 382 ? ? ? A . n A 1 133 GLY 133 383 383 GLY GLY A . n A 1 134 PRO 134 384 384 PRO PRO A . n A 1 135 SER 135 385 385 SER SER A . n A 1 136 PRO 136 386 386 PRO PRO A . n A 1 137 TYR 137 387 387 TYR TYR A . n A 1 138 LEU 138 388 388 LEU LEU A . n A 1 139 GLY 139 389 389 GLY GLY A . n A 1 140 ARG 140 390 390 ARG ARG A . n A 1 141 PHE 141 391 391 PHE PHE A . n A 1 142 LYS 142 392 392 LYS LYS A . n A 1 143 VAL 143 393 393 VAL VAL A . n A 1 144 GLY 144 394 394 GLY GLY A . n A 1 145 SER 145 395 395 SER SER A . n A 1 146 HIS 146 396 396 HIS HIS A . n A 1 147 ASP 147 397 397 ASP ASP A . n A 1 148 LEU 148 398 398 LEU LEU A . n A 1 149 THR 149 399 399 THR THR A . n A 1 150 LEU 150 400 400 LEU LEU A . n A 1 151 VAL 151 401 401 VAL VAL A . n A 1 152 ASN 152 402 402 ASN ASN A . n A 1 153 LEU 153 403 403 LEU LEU A . n A 1 154 HIS 154 404 404 HIS HIS A . n A 1 155 LEU 155 405 405 LEU LEU A . n A 1 156 ALA 156 406 406 ALA ALA A . n A 1 157 ALA 157 407 407 ALA ALA A . n A 1 158 LEU 158 408 ? ? ? A . n A 1 159 THR 159 409 ? ? ? A . n A 1 160 LEU 160 410 ? ? ? A . n A 1 161 LEU 161 411 ? ? ? A . n A 1 162 GLY 162 412 ? ? ? A . n A 1 163 SER 163 413 ? ? ? A . n A 1 164 GLU 164 414 ? ? ? A . n A 1 165 ASN 165 415 ? ? ? A . n A 1 166 PRO 166 416 ? ? ? A . n A 1 167 SER 167 417 ? ? ? A . n A 1 168 LYS 168 418 ? ? ? A . n A 1 169 ASN 169 419 ? ? ? A . n A 1 170 HIS 170 420 ? ? ? A . n A 1 171 SER 171 421 ? ? ? A . n A 1 172 ASP 172 422 ? ? ? A . n A 1 173 GLY 173 423 ? ? ? A . n A 1 174 HIS 174 424 424 HIS HIS A . n A 1 175 ARG 175 425 425 ARG ARG A . n A 1 176 LEU 176 426 426 LEU LEU A . n A 1 177 ALA 177 427 427 ALA ALA A . n A 1 178 SER 178 428 428 SER SER A . n A 1 179 PHE 179 429 429 PHE PHE A . n A 1 180 ALA 180 430 430 ALA ALA A . n A 1 181 GLN 181 431 431 GLN GLN A . n A 1 182 THR 182 432 432 THR THR A . n A 1 183 LEU 183 433 433 LEU LEU A . n A 1 184 GLN 184 434 434 GLN GLN A . n A 1 185 GLU 185 435 435 GLU GLU A . n A 1 186 THR 186 436 436 THR THR A . n A 1 187 LEU 187 437 437 LEU LEU A . n A 1 188 LYS 188 438 438 LYS LYS A . n A 1 189 GLY 189 439 439 GLY GLY A . n A 1 190 GLU 190 440 440 GLU GLU A . n A 1 191 LYS 191 441 441 LYS LYS A . n A 1 192 ASP 192 442 442 ASP ASP A . n A 1 193 VAL 193 443 443 VAL VAL A . n A 1 194 ILE 194 444 444 ILE ILE A . n A 1 195 ILE 195 445 445 ILE ILE A . n A 1 196 LEU 196 446 446 LEU LEU A . n A 1 197 GLY 197 447 447 GLY GLY A . n A 1 198 ASP 198 448 448 ASP ASP A . n A 1 199 PHE 199 449 449 PHE PHE A . n A 1 200 GLY 200 450 450 GLY GLY A . n A 1 201 GLN 201 451 451 GLN GLN A . n A 1 202 GLY 202 452 452 GLY GLY A . n A 1 203 PRO 203 453 453 PRO PRO A . n A 1 204 ASP 204 454 454 ASP ASP A . n A 1 205 SER 205 455 455 SER SER A . n A 1 206 ASN 206 456 456 ASN ASN A . n A 1 207 ASP 207 457 457 ASP ASP A . n A 1 208 TYR 208 458 458 TYR TYR A . n A 1 209 ASP 209 459 459 ASP ASP A . n A 1 210 ILE 210 460 460 ILE ILE A . n A 1 211 LEU 211 461 461 LEU LEU A . n A 1 212 ARG 212 462 462 ARG ARG A . n A 1 213 LYS 213 463 463 LYS LYS A . n A 1 214 GLU 214 464 464 GLU GLU A . n A 1 215 LYS 215 465 465 LYS LYS A . n A 1 216 PHE 216 466 466 PHE PHE A . n A 1 217 HIS 217 467 467 HIS HIS A . n A 1 218 HIS 218 468 468 HIS HIS A . n A 1 219 LEU 219 469 469 LEU LEU A . n A 1 220 ILE 220 470 470 ILE ILE A . n A 1 221 PRO 221 471 471 PRO PRO A . n A 1 222 ALA 222 472 472 ALA ALA A . n A 1 223 HIS 223 473 473 HIS HIS A . n A 1 224 THR 224 474 474 THR THR A . n A 1 225 PHE 225 475 475 PHE PHE A . n A 1 226 THR 226 476 476 THR THR A . n A 1 227 ASN 227 477 477 ASN ASN A . n A 1 228 ILE 228 478 478 ILE ILE A . n A 1 229 SER 229 479 479 SER SER A . n A 1 230 THR 230 480 480 THR THR A . n A 1 231 LYS 231 481 481 LYS LYS A . n A 1 232 ASN 232 482 482 ASN ASN A . n A 1 233 PRO 233 483 483 PRO PRO A . n A 1 234 GLN 234 484 484 GLN GLN A . n A 1 235 GLY 235 485 485 GLY GLY A . n A 1 236 SER 236 486 486 SER SER A . n A 1 237 LYS 237 487 487 LYS LYS A . n A 1 238 SER 238 488 488 SER SER A . n A 1 239 LEU 239 489 489 LEU LEU A . n A 1 240 ASP 240 490 490 ASP ASP A . n A 1 241 ASN 241 491 491 ASN ASN A . n A 1 242 ILE 242 492 492 ILE ILE A . n A 1 243 TRP 243 493 493 TRP TRP A . n A 1 244 ILE 244 494 494 ILE ILE A . n A 1 245 SER 245 495 495 SER SER A . n A 1 246 LYS 246 496 496 LYS LYS A . n A 1 247 SER 247 497 497 SER SER A . n A 1 248 LEU 248 498 498 LEU LEU A . n A 1 249 LYS 249 499 499 LYS LYS A . n A 1 250 LYS 250 500 500 LYS LYS A . n A 1 251 VAL 251 501 501 VAL VAL A . n A 1 252 PHE 252 502 502 PHE PHE A . n A 1 253 THR 253 503 503 THR THR A . n A 1 254 GLY 254 504 504 GLY GLY A . n A 1 255 HIS 255 505 505 HIS HIS A . n A 1 256 TRP 256 506 506 TRP TRP A . n A 1 257 ALA 257 507 507 ALA ALA A . n A 1 258 VAL 258 508 508 VAL VAL A . n A 1 259 VAL 259 509 509 VAL VAL A . n A 1 260 ARG 260 510 510 ARG ARG A . n A 1 261 GLU 261 511 511 GLU GLU A . n A 1 262 GLY 262 512 512 GLY GLY A . n A 1 263 LEU 263 513 513 LEU LEU A . n A 1 264 THR 264 514 514 THR THR A . n A 1 265 ASN 265 515 515 ASN ASN A . n A 1 266 PRO 266 516 516 PRO PRO A . n A 1 267 TRP 267 517 517 TRP TRP A . n A 1 268 ILE 268 518 518 ILE ILE A . n A 1 269 PRO 269 519 519 PRO PRO A . n A 1 270 ASP 270 520 520 ASP ASP A . n A 1 271 ASN 271 521 521 ASN ASN A . n A 1 272 TRP 272 522 522 TRP TRP A . n A 1 273 SER 273 523 523 SER SER A . n A 1 274 TRP 274 524 524 TRP TRP A . n A 1 275 GLY 275 525 525 GLY GLY A . n A 1 276 GLY 276 526 526 GLY GLY A . n A 1 277 VAL 277 527 527 VAL VAL A . n A 1 278 ALA 278 528 528 ALA ALA A . n A 1 279 SER 279 529 529 SER SER A . n A 1 280 GLU 280 530 530 GLU GLU A . n A 1 281 HIS 281 531 531 HIS HIS A . n A 1 282 CYS 282 532 532 CYS CYS A . n A 1 283 PRO 283 533 533 PRO PRO A . n A 1 284 VAL 284 534 534 VAL VAL A . n A 1 285 LEU 285 535 535 LEU LEU A . n A 1 286 ALA 286 536 536 ALA ALA A . n A 1 287 GLU 287 537 537 GLU GLU A . n A 1 288 PHE 288 538 538 PHE PHE A . n A 1 289 TYR 289 539 539 TYR TYR A . n A 1 290 THR 290 540 540 THR THR A . n A 1 291 GLU 291 541 541 GLU GLU A . n A 1 292 LYS 292 542 542 LYS LYS A . n A 1 293 ASP 293 543 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 601 601 EDO EDO A . C 2 EDO 1 602 602 EDO EDO A . D 2 EDO 1 603 603 EDO EDO A . E 3 TRS 1 604 604 TRS TRS A . F 2 EDO 1 605 605 EDO EDO A . G 4 MG 1 606 1 MG MG A . H 4 MG 1 607 3 MG MG A . I 5 CL 1 608 1 CL CL A . J 5 CL 1 609 2 CL CL A . K 6 HOH 1 701 234 HOH HOH A . K 6 HOH 2 702 181 HOH HOH A . K 6 HOH 3 703 197 HOH HOH A . K 6 HOH 4 704 189 HOH HOH A . K 6 HOH 5 705 62 HOH HOH A . K 6 HOH 6 706 86 HOH HOH A . K 6 HOH 7 707 125 HOH HOH A . K 6 HOH 8 708 58 HOH HOH A . K 6 HOH 9 709 49 HOH HOH A . K 6 HOH 10 710 207 HOH HOH A . K 6 HOH 11 711 144 HOH HOH A . K 6 HOH 12 712 143 HOH HOH A . K 6 HOH 13 713 51 HOH HOH A . K 6 HOH 14 714 239 HOH HOH A . K 6 HOH 15 715 200 HOH HOH A . K 6 HOH 16 716 243 HOH HOH A . K 6 HOH 17 717 26 HOH HOH A . K 6 HOH 18 718 90 HOH HOH A . K 6 HOH 19 719 135 HOH HOH A . K 6 HOH 20 720 97 HOH HOH A . K 6 HOH 21 721 119 HOH HOH A . K 6 HOH 22 722 215 HOH HOH A . K 6 HOH 23 723 37 HOH HOH A . K 6 HOH 24 724 129 HOH HOH A . K 6 HOH 25 725 66 HOH HOH A . K 6 HOH 26 726 102 HOH HOH A . K 6 HOH 27 727 17 HOH HOH A . K 6 HOH 28 728 115 HOH HOH A . K 6 HOH 29 729 13 HOH HOH A . K 6 HOH 30 730 79 HOH HOH A . K 6 HOH 31 731 19 HOH HOH A . K 6 HOH 32 732 24 HOH HOH A . K 6 HOH 33 733 67 HOH HOH A . K 6 HOH 34 734 128 HOH HOH A . K 6 HOH 35 735 196 HOH HOH A . K 6 HOH 36 736 7 HOH HOH A . K 6 HOH 37 737 231 HOH HOH A . K 6 HOH 38 738 16 HOH HOH A . K 6 HOH 39 739 3 HOH HOH A . K 6 HOH 40 740 11 HOH HOH A . K 6 HOH 41 741 233 HOH HOH A . K 6 HOH 42 742 44 HOH HOH A . K 6 HOH 43 743 94 HOH HOH A . K 6 HOH 44 744 123 HOH HOH A . K 6 HOH 45 745 95 HOH HOH A . K 6 HOH 46 746 50 HOH HOH A . K 6 HOH 47 747 149 HOH HOH A . K 6 HOH 48 748 4 HOH HOH A . K 6 HOH 49 749 38 HOH HOH A . K 6 HOH 50 750 59 HOH HOH A . K 6 HOH 51 751 5 HOH HOH A . K 6 HOH 52 752 32 HOH HOH A . K 6 HOH 53 753 83 HOH HOH A . K 6 HOH 54 754 96 HOH HOH A . K 6 HOH 55 755 65 HOH HOH A . K 6 HOH 56 756 12 HOH HOH A . K 6 HOH 57 757 29 HOH HOH A . K 6 HOH 58 758 53 HOH HOH A . K 6 HOH 59 759 69 HOH HOH A . K 6 HOH 60 760 245 HOH HOH A . K 6 HOH 61 761 23 HOH HOH A . K 6 HOH 62 762 246 HOH HOH A . K 6 HOH 63 763 46 HOH HOH A . K 6 HOH 64 764 68 HOH HOH A . K 6 HOH 65 765 202 HOH HOH A . K 6 HOH 66 766 41 HOH HOH A . K 6 HOH 67 767 9 HOH HOH A . K 6 HOH 68 768 18 HOH HOH A . K 6 HOH 69 769 88 HOH HOH A . K 6 HOH 70 770 35 HOH HOH A . K 6 HOH 71 771 6 HOH HOH A . K 6 HOH 72 772 21 HOH HOH A . K 6 HOH 73 773 39 HOH HOH A . K 6 HOH 74 774 45 HOH HOH A . K 6 HOH 75 775 145 HOH HOH A . K 6 HOH 76 776 80 HOH HOH A . K 6 HOH 77 777 178 HOH HOH A . K 6 HOH 78 778 109 HOH HOH A . K 6 HOH 79 779 22 HOH HOH A . K 6 HOH 80 780 81 HOH HOH A . K 6 HOH 81 781 33 HOH HOH A . K 6 HOH 82 782 25 HOH HOH A . K 6 HOH 83 783 15 HOH HOH A . K 6 HOH 84 784 253 HOH HOH A . K 6 HOH 85 785 220 HOH HOH A . K 6 HOH 86 786 116 HOH HOH A . K 6 HOH 87 787 42 HOH HOH A . K 6 HOH 88 788 240 HOH HOH A . K 6 HOH 89 789 10 HOH HOH A . K 6 HOH 90 790 84 HOH HOH A . K 6 HOH 91 791 27 HOH HOH A . K 6 HOH 92 792 164 HOH HOH A . K 6 HOH 93 793 57 HOH HOH A . K 6 HOH 94 794 82 HOH HOH A . K 6 HOH 95 795 106 HOH HOH A . K 6 HOH 96 796 101 HOH HOH A . K 6 HOH 97 797 14 HOH HOH A . K 6 HOH 98 798 162 HOH HOH A . K 6 HOH 99 799 138 HOH HOH A . K 6 HOH 100 800 43 HOH HOH A . K 6 HOH 101 801 34 HOH HOH A . K 6 HOH 102 802 158 HOH HOH A . K 6 HOH 103 803 254 HOH HOH A . K 6 HOH 104 804 104 HOH HOH A . K 6 HOH 105 805 56 HOH HOH A . K 6 HOH 106 806 105 HOH HOH A . K 6 HOH 107 807 175 HOH HOH A . K 6 HOH 108 808 140 HOH HOH A . K 6 HOH 109 809 74 HOH HOH A . K 6 HOH 110 810 61 HOH HOH A . K 6 HOH 111 811 147 HOH HOH A . K 6 HOH 112 812 73 HOH HOH A . K 6 HOH 113 813 20 HOH HOH A . K 6 HOH 114 814 156 HOH HOH A . K 6 HOH 115 815 30 HOH HOH A . K 6 HOH 116 816 131 HOH HOH A . K 6 HOH 117 817 63 HOH HOH A . K 6 HOH 118 818 127 HOH HOH A . K 6 HOH 119 819 112 HOH HOH A . K 6 HOH 120 820 142 HOH HOH A . K 6 HOH 121 821 217 HOH HOH A . K 6 HOH 122 822 213 HOH HOH A . K 6 HOH 123 823 1 HOH HOH A . K 6 HOH 124 824 54 HOH HOH A . K 6 HOH 125 825 177 HOH HOH A . K 6 HOH 126 826 174 HOH HOH A . K 6 HOH 127 827 71 HOH HOH A . K 6 HOH 128 828 48 HOH HOH A . K 6 HOH 129 829 166 HOH HOH A . K 6 HOH 130 830 171 HOH HOH A . K 6 HOH 131 831 179 HOH HOH A . K 6 HOH 132 832 170 HOH HOH A . K 6 HOH 133 833 108 HOH HOH A . K 6 HOH 134 834 159 HOH HOH A . K 6 HOH 135 835 191 HOH HOH A . K 6 HOH 136 836 236 HOH HOH A . K 6 HOH 137 837 31 HOH HOH A . K 6 HOH 138 838 40 HOH HOH A . K 6 HOH 139 839 210 HOH HOH A . K 6 HOH 140 840 55 HOH HOH A . K 6 HOH 141 841 157 HOH HOH A . K 6 HOH 142 842 237 HOH HOH A . K 6 HOH 143 843 247 HOH HOH A . K 6 HOH 144 844 163 HOH HOH A . K 6 HOH 145 845 114 HOH HOH A . K 6 HOH 146 846 99 HOH HOH A . K 6 HOH 147 847 64 HOH HOH A . K 6 HOH 148 848 211 HOH HOH A . K 6 HOH 149 849 111 HOH HOH A . K 6 HOH 150 850 60 HOH HOH A . K 6 HOH 151 851 251 HOH HOH A . K 6 HOH 152 852 201 HOH HOH A . K 6 HOH 153 853 193 HOH HOH A . K 6 HOH 154 854 198 HOH HOH A . K 6 HOH 155 855 214 HOH HOH A . K 6 HOH 156 856 28 HOH HOH A . K 6 HOH 157 857 8 HOH HOH A . K 6 HOH 158 858 250 HOH HOH A . K 6 HOH 159 859 139 HOH HOH A . K 6 HOH 160 860 36 HOH HOH A . K 6 HOH 161 861 77 HOH HOH A . K 6 HOH 162 862 120 HOH HOH A . K 6 HOH 163 863 173 HOH HOH A . K 6 HOH 164 864 152 HOH HOH A . K 6 HOH 165 865 219 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 425 ? CG ? A ARG 175 CG 2 1 Y 1 A ARG 425 ? CD ? A ARG 175 CD 3 1 Y 1 A ARG 425 ? NE ? A ARG 175 NE 4 1 Y 1 A ARG 425 ? CZ ? A ARG 175 CZ 5 1 Y 1 A ARG 425 ? NH1 ? A ARG 175 NH1 6 1 Y 1 A ARG 425 ? NH2 ? A ARG 175 NH2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.2_5419 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20210323 ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.7 ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.3 ? 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 110.018 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9YSF _cell.details ? _cell.formula_units_Z ? _cell.length_a 87.318 _cell.length_a_esd ? _cell.length_b 48.210 _cell.length_b_esd ? _cell.length_c 73.695 _cell.length_c_esd ? _cell.volume 291484.233 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9YSF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9YSF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Tris, pH 8.5, 0.3 M magnesium chloride, 25% w/v PEG3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 288 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-07-28 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979460 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL12-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979460 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL12-1 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate 26.21 _reflns.entry_id 9YSF _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.59 _reflns.d_resolution_low 38.72 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 37207 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.35 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.21 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.05206 _reflns.pdbx_Rpim_I_all 0.01976 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star 1 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.04806 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.59 _reflns_shell.d_res_low 1.63 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2119 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.9 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.429 _reflns_shell.pdbx_Rpim_I_all 0.6345 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.68 _reflns_shell.pdbx_CC_star 0.9 _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 70.58 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.274 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 50.23 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9YSF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.59 _refine.ls_d_res_low 38.72 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 37123 _refine.ls_number_reflns_R_free 1796 _refine.ls_number_reflns_R_work 35327 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.35 _refine.ls_percent_reflns_R_free 4.84 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1677 _refine.ls_R_factor_R_free 0.2043 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1660 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.3769 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1987 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.59 _refine_hist.d_res_low 38.72 _refine_hist.number_atoms_solvent 165 _refine_hist.number_atoms_total 2245 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2052 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0097 ? 2138 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 1.0006 ? 2893 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0661 ? 311 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0120 ? 369 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 17.9593 ? 776 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.59 1.63 . . 103 2006 70.58 . . . . 0.3877 . . . . . . . . . . . . . . . 0.4062 'X-RAY DIFFRACTION' 1.63 1.68 . . 107 2316 81.75 . . . . 0.3342 . . . . . . . . . . . . . . . 0.3465 'X-RAY DIFFRACTION' 1.68 1.74 . . 153 2728 96.55 . . . . 0.2735 . . . . . . . . . . . . . . . 0.3465 'X-RAY DIFFRACTION' 1.74 1.80 . . 149 2837 99.43 . . . . 0.2459 . . . . . . . . . . . . . . . 0.2580 'X-RAY DIFFRACTION' 1.80 1.87 . . 139 2769 99.08 . . . . 0.2122 . . . . . . . . . . . . . . . 0.2767 'X-RAY DIFFRACTION' 1.87 1.95 . . 151 2795 99.03 . . . . 0.1729 . . . . . . . . . . . . . . . 0.2221 'X-RAY DIFFRACTION' 1.95 2.06 . . 147 2806 98.66 . . . . 0.1488 . . . . . . . . . . . . . . . 0.2009 'X-RAY DIFFRACTION' 2.06 2.19 . . 146 2787 98.13 . . . . 0.1488 . . . . . . . . . . . . . . . 0.2170 'X-RAY DIFFRACTION' 2.19 2.36 . . 172 2809 99.83 . . . . 0.1449 . . . . . . . . . . . . . . . 0.1973 'X-RAY DIFFRACTION' 2.36 2.59 . . 147 2831 99.63 . . . . 0.1479 . . . . . . . . . . . . . . . 0.1950 'X-RAY DIFFRACTION' 2.59 2.97 . . 128 2839 98.67 . . . . 0.1461 . . . . . . . . . . . . . . . 0.1840 'X-RAY DIFFRACTION' 2.97 3.74 . . 105 2890 99.04 . . . . 0.1481 . . . . . . . . . . . . . . . 0.1753 'X-RAY DIFFRACTION' 3.74 38.72 . . 149 2914 98.90 . . . . 0.1673 . . . . . . . . . . . . . . . 0.1931 # _struct.entry_id 9YSF _struct.title 'Crystal structure of EEPD1 EEP domain dimer with Mg(II)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9YSF _struct_keywords.text 'Endonuclease/Exonuclease/Phosphatase Fold, Dimerization, Replication stress response, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code EEPD1_HUMAN _struct_ref.pdbx_db_accession Q7L9B9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TRDGRPVLRLATWNLQGCSVEKANNPGVREVVCMTLLENSIKLLAVQELLDREALEKFCTELNQPTLPNIRKWKGPRGCW KAVVAEKPSSQLQKGAGYAGFLWDAAAGMELRDAGSQESSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGS ENPSKNHSDGHRLASFAQTLQETLKGEKDVIILGDFGQGPDSNDYDILRKEKFHHLIPAHTFTNISTKNPQGSKSLDNIW ISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEFYTEKD ; _struct_ref.pdbx_align_begin 254 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9YSF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 293 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7L9B9 _struct_ref_seq.db_align_beg 254 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 543 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 254 _struct_ref_seq.pdbx_auth_seq_align_end 543 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9YSF GLY A 1 ? UNP Q7L9B9 ? ? 'expression tag' 251 1 1 9YSF PRO A 2 ? UNP Q7L9B9 ? ? 'expression tag' 252 2 1 9YSF MET A 3 ? UNP Q7L9B9 ? ? 'expression tag' 253 3 1 9YSF ASN A 93 ? UNP Q7L9B9 SER 343 variant 343 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K 1 2 A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 cross-linking ? 3 1 'electron microscopy' ? 4 1 SAXS ? 5 1 'assay for oligomerization' ;microscale thermophoresis; mutagenesis ; # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 87.3180000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 22 ? ASN A 28 ? SER A 272 ASN A 278 1 ? 7 HELX_P HELX_P2 AA2 ASN A 28 ? ASN A 42 ? ASN A 278 ASN A 292 1 ? 15 HELX_P HELX_P3 AA3 GLU A 56 ? GLN A 67 ? GLU A 306 GLN A 317 1 ? 12 HELX_P HELX_P4 AA4 LEU A 70 ? LYS A 75 ? LEU A 320 LYS A 325 1 ? 6 HELX_P HELX_P5 AA5 GLN A 96 ? GLY A 100 ? GLN A 346 GLY A 350 5 ? 5 HELX_P HELX_P6 AA6 ARG A 175 ? LYS A 188 ? ARG A 425 LYS A 438 1 ? 14 HELX_P HELX_P7 AA7 SER A 205 ? ASP A 207 ? SER A 455 ASP A 457 5 ? 3 HELX_P HELX_P8 AA8 TYR A 208 ? GLU A 214 ? TYR A 458 GLU A 464 1 ? 7 HELX_P HELX_P9 AA9 LYS A 246 ? LYS A 249 ? LYS A 496 LYS A 499 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 281 NE2 ? ? ? 1_555 H MG . MG ? ? A HIS 531 A MG 607 1_555 ? ? ? ? ? ? ? 2.299 ? ? metalc2 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 606 A HOH 708 1_555 ? ? ? ? ? ? ? 2.062 ? ? metalc3 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 606 A HOH 717 1_555 ? ? ? ? ? ? ? 2.235 ? ? metalc4 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 606 A HOH 742 1_555 ? ? ? ? ? ? ? 2.226 ? ? metalc5 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 606 A HOH 749 1_555 ? ? ? ? ? ? ? 2.697 ? ? metalc6 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 606 A HOH 859 1_555 ? ? ? ? ? ? ? 2.191 ? ? metalc7 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 606 A HOH 861 1_555 ? ? ? ? ? ? ? 1.952 ? ? metalc8 metalc ? ? H MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 607 A HOH 704 1_555 ? ? ? ? ? ? ? 2.087 ? ? metalc9 metalc ? ? H MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 607 A HOH 760 1_555 ? ? ? ? ? ? ? 1.994 ? ? metalc10 metalc ? ? H MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 607 A HOH 828 1_555 ? ? ? ? ? ? ? 2.046 ? ? metalc11 metalc ? ? H MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 607 A HOH 829 1_555 ? ? ? ? ? ? ? 2.543 ? ? metalc12 metalc ? ? H MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 607 A HOH 847 1_555 ? ? ? ? ? ? ? 2.051 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 281 ? A HIS 531 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 704 ? 1_555 97.8 ? 2 NE2 ? A HIS 281 ? A HIS 531 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 760 ? 1_555 86.4 ? 3 O ? K HOH . ? A HOH 704 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 760 ? 1_555 89.6 ? 4 NE2 ? A HIS 281 ? A HIS 531 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 828 ? 1_555 96.1 ? 5 O ? K HOH . ? A HOH 704 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 828 ? 1_555 91.9 ? 6 O ? K HOH . ? A HOH 760 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 828 ? 1_555 176.9 ? 7 NE2 ? A HIS 281 ? A HIS 531 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 829 ? 1_555 84.1 ? 8 O ? K HOH . ? A HOH 704 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 829 ? 1_555 174.6 ? 9 O ? K HOH . ? A HOH 760 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 829 ? 1_555 95.6 ? 10 O ? K HOH . ? A HOH 828 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 829 ? 1_555 82.8 ? 11 NE2 ? A HIS 281 ? A HIS 531 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 847 ? 1_555 160.7 ? 12 O ? K HOH . ? A HOH 704 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 847 ? 1_555 79.7 ? 13 O ? K HOH . ? A HOH 760 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 847 ? 1_555 74.6 ? 14 O ? K HOH . ? A HOH 828 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 847 ? 1_555 103.1 ? 15 O ? K HOH . ? A HOH 829 ? 1_555 MG ? H MG . ? A MG 607 ? 1_555 O ? K HOH . ? A HOH 847 ? 1_555 100.2 ? 16 O ? K HOH . ? A HOH 708 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 717 ? 1_555 88.8 ? 17 O ? K HOH . ? A HOH 708 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 742 ? 1_555 173.1 ? 18 O ? K HOH . ? A HOH 717 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 742 ? 1_555 84.4 ? 19 O ? K HOH . ? A HOH 708 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 749 ? 1_555 75.6 ? 20 O ? K HOH . ? A HOH 717 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 749 ? 1_555 89.6 ? 21 O ? K HOH . ? A HOH 742 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 749 ? 1_555 104.2 ? 22 O ? K HOH . ? A HOH 708 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 859 ? 1_555 95.5 ? 23 O ? K HOH . ? A HOH 717 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 859 ? 1_555 92.4 ? 24 O ? K HOH . ? A HOH 742 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 859 ? 1_555 84.9 ? 25 O ? K HOH . ? A HOH 749 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 859 ? 1_555 170.9 ? 26 O ? K HOH . ? A HOH 708 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 861 ? 1_555 88.1 ? 27 O ? K HOH . ? A HOH 717 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 861 ? 1_555 175.6 ? 28 O ? K HOH . ? A HOH 742 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 861 ? 1_555 98.8 ? 29 O ? K HOH . ? A HOH 749 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 861 ? 1_555 86.7 ? 30 O ? K HOH . ? A HOH 859 ? 1_555 MG ? G MG . ? A MG 606 ? 1_555 O ? K HOH . ? A HOH 861 ? 1_555 91.0 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? AA3 ? 6 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 4 ? ARG A 5 ? THR A 254 ARG A 255 AA1 2 ARG A 8 ? CYS A 21 ? ARG A 258 CYS A 271 AA1 3 ILE A 44 ? LEU A 52 ? ILE A 294 LEU A 302 AA1 4 TYR A 101 ? ASP A 107 ? TYR A 351 ASP A 357 AA1 5 TRP A 83 ? VAL A 87 ? TRP A 333 VAL A 337 AA2 1 THR A 4 ? ARG A 5 ? THR A 254 ARG A 255 AA2 2 ARG A 8 ? CYS A 21 ? ARG A 258 CYS A 271 AA2 3 VAL A 284 ? TYR A 289 ? VAL A 534 TYR A 539 AA2 4 PHE A 252 ? VAL A 258 ? PHE A 502 VAL A 508 AA3 1 MET A 112 ? SER A 119 ? MET A 362 SER A 369 AA3 2 TYR A 137 ? VAL A 143 ? TYR A 387 VAL A 393 AA3 3 HIS A 146 ? HIS A 154 ? HIS A 396 HIS A 404 AA3 4 VAL A 193 ? ASP A 198 ? VAL A 443 ASP A 448 AA3 5 ASP A 240 ? ILE A 244 ? ASP A 490 ILE A 494 AA3 6 HIS A 217 ? HIS A 218 ? HIS A 467 HIS A 468 AA4 1 PRO A 269 ? ASP A 270 ? PRO A 519 ASP A 520 AA4 2 SER A 273 ? TRP A 274 ? SER A 523 TRP A 524 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 5 ? N ARG A 255 O ARG A 8 ? O ARG A 258 AA1 2 3 N ALA A 14 ? N ALA A 264 O ALA A 48 ? O ALA A 298 AA1 3 4 N LEU A 47 ? N LEU A 297 O LEU A 105 ? O LEU A 355 AA1 4 5 O TRP A 106 ? O TRP A 356 N LYS A 84 ? N LYS A 334 AA2 1 2 N ARG A 5 ? N ARG A 255 O ARG A 8 ? O ARG A 258 AA2 2 3 N LEU A 11 ? N LEU A 261 O PHE A 288 ? O PHE A 538 AA2 3 4 O LEU A 285 ? O LEU A 535 N ALA A 257 ? N ALA A 507 AA3 1 2 N ARG A 115 ? N ARG A 365 O ARG A 140 ? O ARG A 390 AA3 2 3 N GLY A 139 ? N GLY A 389 O LEU A 150 ? O LEU A 400 AA3 3 4 N VAL A 151 ? N VAL A 401 O ILE A 194 ? O ILE A 444 AA3 4 5 N ILE A 195 ? N ILE A 445 O TRP A 243 ? O TRP A 493 AA3 5 6 O ILE A 244 ? O ILE A 494 N HIS A 217 ? N HIS A 467 AA4 1 2 N ASP A 270 ? N ASP A 520 O SER A 273 ? O SER A 523 # _pdbx_entry_details.entry_id 9YSF _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 749 ? ? O A HOH 804 ? ? 2.12 2 1 O A HOH 805 ? ? O A HOH 860 ? ? 2.15 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 840 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 840 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_656 _pdbx_validate_symm_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 256 ? ? 63.46 -114.09 2 1 GLN A 269 ? ? 65.86 92.04 3 1 SER A 486 ? ? -151.36 -19.82 4 1 ASN A 521 ? ? 62.81 -115.33 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 823 ? K HOH . 2 1 A HOH 845 ? K HOH . 3 1 A HOH 857 ? K HOH . # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y,-z 3 x+1/2,y+1/2,z 4 -x+1/2,y+1/2,-z # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 27.6507305321 36.0405658988 14.7774425982 0.416091082888 ? -0.0192627648346 ? -0.0459837084287 ? 0.26810343406 ? 0.0225475353994 ? 0.194796589214 ? 3.39986491051 ? -0.341282163599 ? -1.58613822698 ? 2.60131257673 ? 0.427918836244 ? 4.25146047477 ? -0.0347681686056 ? -0.177248808597 ? -0.247434547569 ? 0.191019408192 ? -0.00493360622924 ? 0.108018933172 ? 0.41460359512 ? 0.0335863652719 ? 0.0864865574655 ? 2 'X-RAY DIFFRACTION' ? refined 20.7250927648 42.2966620018 11.543703624 0.325066898623 ? -0.00590584511265 ? -0.0576645593723 ? 0.260166614941 ? 0.0118255645329 ? 0.160616744352 ? 2.42020620843 ? -0.370548805789 ? -0.322470180189 ? 3.50943548315 ? 0.917417343753 ? 4.34799308499 ? 0.0114758074792 ? -0.0595732940871 ? 0.0507011873859 ? 0.0702782488732 ? -0.0803939783363 ? 0.143969332166 ? -0.0391349753657 ? -0.359318436098 ? 0.0879904195036 ? 3 'X-RAY DIFFRACTION' ? refined 16.7478950012 61.9851094124 22.057056459 1.70919024552 ? 0.471782910538 ? 0.0914899651502 ? 0.991358956864 ? 0.203676854829 ? 1.19667188598 ? 8.41404436348 ? 5.59531730366 ? -2.67598857246 ? 8.55949893661 ? -0.28502716687 ? 3.60548275936 ? -0.60984569066 ? 0.0468833166287 ? 1.16035265766 ? -0.531088039141 ? 0.599330772267 ? 1.87111201264 ? -1.44563070132 ? -0.186101973602 ? 0.057827758937 ? 4 'X-RAY DIFFRACTION' ? refined 30.3375867804 45.3746097404 22.8188452914 0.416612336983 ? 0.0248934415291 ? -0.0582176545093 ? 0.287182996826 ? 0.00124516095754 ? 0.176338233389 ? 2.07742287842 ? -1.03701897084 ? -1.53759756009 ? 1.91236561393 ? 1.53851203139 ? 4.66901136696 ? -0.148961057909 ? -0.343794571719 ? 0.130156162727 ? 0.234360149314 ? 0.196374965523 ? -0.0811470272085 ? -0.00930165059342 ? 0.121894451818 ? -0.0561302924353 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A 1 A 253 ? A 39 A 291 ? ? ;chain 'A' and (resid 253 through 291 ) ; 2 'X-RAY DIFFRACTION' 2 A 40 A 292 ? A 144 A 424 ? ? ;chain 'A' and (resid 292 through 424 ) ; 3 'X-RAY DIFFRACTION' 3 A 145 A 425 ? A 159 A 439 ? ? ;chain 'A' and (resid 425 through 439 ) ; 4 'X-RAY DIFFRACTION' 4 A 160 A 440 ? A 262 A 542 ? ? ;chain 'A' and (resid 440 through 542 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 251 ? A GLY 1 2 1 Y 1 A PRO 252 ? A PRO 2 3 1 Y 1 A GLU 371 ? A GLU 121 4 1 Y 1 A SER 372 ? A SER 122 5 1 Y 1 A SER 373 ? A SER 123 6 1 Y 1 A PRO 374 ? A PRO 124 7 1 Y 1 A SER 375 ? A SER 125 8 1 Y 1 A ASN 376 ? A ASN 126 9 1 Y 1 A GLY 377 ? A GLY 127 10 1 Y 1 A HIS 378 ? A HIS 128 11 1 Y 1 A GLY 379 ? A GLY 129 12 1 Y 1 A LYS 380 ? A LYS 130 13 1 Y 1 A LEU 381 ? A LEU 131 14 1 Y 1 A ALA 382 ? A ALA 132 15 1 Y 1 A LEU 408 ? A LEU 158 16 1 Y 1 A THR 409 ? A THR 159 17 1 Y 1 A LEU 410 ? A LEU 160 18 1 Y 1 A LEU 411 ? A LEU 161 19 1 Y 1 A GLY 412 ? A GLY 162 20 1 Y 1 A SER 413 ? A SER 163 21 1 Y 1 A GLU 414 ? A GLU 164 22 1 Y 1 A ASN 415 ? A ASN 165 23 1 Y 1 A PRO 416 ? A PRO 166 24 1 Y 1 A SER 417 ? A SER 167 25 1 Y 1 A LYS 418 ? A LYS 168 26 1 Y 1 A ASN 419 ? A ASN 169 27 1 Y 1 A HIS 420 ? A HIS 170 28 1 Y 1 A SER 421 ? A SER 171 29 1 Y 1 A ASP 422 ? A ASP 172 30 1 Y 1 A GLY 423 ? A GLY 173 31 1 Y 1 A ASP 543 ? A ASP 293 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 EDO C1 C N N 89 EDO O1 O N N 90 EDO C2 C N N 91 EDO O2 O N N 92 EDO H11 H N N 93 EDO H12 H N N 94 EDO HO1 H N N 95 EDO H21 H N N 96 EDO H22 H N N 97 EDO HO2 H N N 98 GLN N N N N 99 GLN CA C N S 100 GLN C C N N 101 GLN O O N N 102 GLN CB C N N 103 GLN CG C N N 104 GLN CD C N N 105 GLN OE1 O N N 106 GLN NE2 N N N 107 GLN OXT O N N 108 GLN H H N N 109 GLN H2 H N N 110 GLN HA H N N 111 GLN HB2 H N N 112 GLN HB3 H N N 113 GLN HG2 H N N 114 GLN HG3 H N N 115 GLN HE21 H N N 116 GLN HE22 H N N 117 GLN HXT H N N 118 GLU N N N N 119 GLU CA C N S 120 GLU C C N N 121 GLU O O N N 122 GLU CB C N N 123 GLU CG C N N 124 GLU CD C N N 125 GLU OE1 O N N 126 GLU OE2 O N N 127 GLU OXT O N N 128 GLU H H N N 129 GLU H2 H N N 130 GLU HA H N N 131 GLU HB2 H N N 132 GLU HB3 H N N 133 GLU HG2 H N N 134 GLU HG3 H N N 135 GLU HE2 H N N 136 GLU HXT H N N 137 GLY N N N N 138 GLY CA C N N 139 GLY C C N N 140 GLY O O N N 141 GLY OXT O N N 142 GLY H H N N 143 GLY H2 H N N 144 GLY HA2 H N N 145 GLY HA3 H N N 146 GLY HXT H N N 147 HIS N N N N 148 HIS CA C N S 149 HIS C C N N 150 HIS O O N N 151 HIS CB C N N 152 HIS CG C Y N 153 HIS ND1 N Y N 154 HIS CD2 C Y N 155 HIS CE1 C Y N 156 HIS NE2 N Y N 157 HIS OXT O N N 158 HIS H H N N 159 HIS H2 H N N 160 HIS HA H N N 161 HIS HB2 H N N 162 HIS HB3 H N N 163 HIS HD1 H N N 164 HIS HD2 H N N 165 HIS HE1 H N N 166 HIS HE2 H N N 167 HIS HXT H N N 168 HOH O O N N 169 HOH H1 H N N 170 HOH H2 H N N 171 ILE N N N N 172 ILE CA C N S 173 ILE C C N N 174 ILE O O N N 175 ILE CB C N S 176 ILE CG1 C N N 177 ILE CG2 C N N 178 ILE CD1 C N N 179 ILE OXT O N N 180 ILE H H N N 181 ILE H2 H N N 182 ILE HA H N N 183 ILE HB H N N 184 ILE HG12 H N N 185 ILE HG13 H N N 186 ILE HG21 H N N 187 ILE HG22 H N N 188 ILE HG23 H N N 189 ILE HD11 H N N 190 ILE HD12 H N N 191 ILE HD13 H N N 192 ILE HXT H N N 193 LEU N N N N 194 LEU CA C N S 195 LEU C C N N 196 LEU O O N N 197 LEU CB C N N 198 LEU CG C N N 199 LEU CD1 C N N 200 LEU CD2 C N N 201 LEU OXT O N N 202 LEU H H N N 203 LEU H2 H N N 204 LEU HA H N N 205 LEU HB2 H N N 206 LEU HB3 H N N 207 LEU HG H N N 208 LEU HD11 H N N 209 LEU HD12 H N N 210 LEU HD13 H N N 211 LEU HD21 H N N 212 LEU HD22 H N N 213 LEU HD23 H N N 214 LEU HXT H N N 215 LYS N N N N 216 LYS CA C N S 217 LYS C C N N 218 LYS O O N N 219 LYS CB C N N 220 LYS CG C N N 221 LYS CD C N N 222 LYS CE C N N 223 LYS NZ N N N 224 LYS OXT O N N 225 LYS H H N N 226 LYS H2 H N N 227 LYS HA H N N 228 LYS HB2 H N N 229 LYS HB3 H N N 230 LYS HG2 H N N 231 LYS HG3 H N N 232 LYS HD2 H N N 233 LYS HD3 H N N 234 LYS HE2 H N N 235 LYS HE3 H N N 236 LYS HZ1 H N N 237 LYS HZ2 H N N 238 LYS HZ3 H N N 239 LYS HXT H N N 240 MET N N N N 241 MET CA C N S 242 MET C C N N 243 MET O O N N 244 MET CB C N N 245 MET CG C N N 246 MET SD S N N 247 MET CE C N N 248 MET OXT O N N 249 MET H H N N 250 MET H2 H N N 251 MET HA H N N 252 MET HB2 H N N 253 MET HB3 H N N 254 MET HG2 H N N 255 MET HG3 H N N 256 MET HE1 H N N 257 MET HE2 H N N 258 MET HE3 H N N 259 MET HXT H N N 260 MG MG MG N N 261 PHE N N N N 262 PHE CA C N S 263 PHE C C N N 264 PHE O O N N 265 PHE CB C N N 266 PHE CG C Y N 267 PHE CD1 C Y N 268 PHE CD2 C Y N 269 PHE CE1 C Y N 270 PHE CE2 C Y N 271 PHE CZ C Y N 272 PHE OXT O N N 273 PHE H H N N 274 PHE H2 H N N 275 PHE HA H N N 276 PHE HB2 H N N 277 PHE HB3 H N N 278 PHE HD1 H N N 279 PHE HD2 H N N 280 PHE HE1 H N N 281 PHE HE2 H N N 282 PHE HZ H N N 283 PHE HXT H N N 284 PRO N N N N 285 PRO CA C N S 286 PRO C C N N 287 PRO O O N N 288 PRO CB C N N 289 PRO CG C N N 290 PRO CD C N N 291 PRO OXT O N N 292 PRO H H N N 293 PRO HA H N N 294 PRO HB2 H N N 295 PRO HB3 H N N 296 PRO HG2 H N N 297 PRO HG3 H N N 298 PRO HD2 H N N 299 PRO HD3 H N N 300 PRO HXT H N N 301 SER N N N N 302 SER CA C N S 303 SER C C N N 304 SER O O N N 305 SER CB C N N 306 SER OG O N N 307 SER OXT O N N 308 SER H H N N 309 SER H2 H N N 310 SER HA H N N 311 SER HB2 H N N 312 SER HB3 H N N 313 SER HG H N N 314 SER HXT H N N 315 THR N N N N 316 THR CA C N S 317 THR C C N N 318 THR O O N N 319 THR CB C N R 320 THR OG1 O N N 321 THR CG2 C N N 322 THR OXT O N N 323 THR H H N N 324 THR H2 H N N 325 THR HA H N N 326 THR HB H N N 327 THR HG1 H N N 328 THR HG21 H N N 329 THR HG22 H N N 330 THR HG23 H N N 331 THR HXT H N N 332 TRP N N N N 333 TRP CA C N S 334 TRP C C N N 335 TRP O O N N 336 TRP CB C N N 337 TRP CG C Y N 338 TRP CD1 C Y N 339 TRP CD2 C Y N 340 TRP NE1 N Y N 341 TRP CE2 C Y N 342 TRP CE3 C Y N 343 TRP CZ2 C Y N 344 TRP CZ3 C Y N 345 TRP CH2 C Y N 346 TRP OXT O N N 347 TRP H H N N 348 TRP H2 H N N 349 TRP HA H N N 350 TRP HB2 H N N 351 TRP HB3 H N N 352 TRP HD1 H N N 353 TRP HE1 H N N 354 TRP HE3 H N N 355 TRP HZ2 H N N 356 TRP HZ3 H N N 357 TRP HH2 H N N 358 TRP HXT H N N 359 TRS C C N N 360 TRS C1 C N N 361 TRS C2 C N N 362 TRS C3 C N N 363 TRS N N N N 364 TRS O1 O N N 365 TRS O2 O N N 366 TRS O3 O N N 367 TRS H11 H N N 368 TRS H12 H N N 369 TRS H21 H N N 370 TRS H22 H N N 371 TRS H31 H N N 372 TRS H32 H N N 373 TRS HN1 H N N 374 TRS HN2 H N N 375 TRS HN3 H N N 376 TRS HO1 H N N 377 TRS HO2 H N N 378 TRS HO3 H N N 379 TYR N N N N 380 TYR CA C N S 381 TYR C C N N 382 TYR O O N N 383 TYR CB C N N 384 TYR CG C Y N 385 TYR CD1 C Y N 386 TYR CD2 C Y N 387 TYR CE1 C Y N 388 TYR CE2 C Y N 389 TYR CZ C Y N 390 TYR OH O N N 391 TYR OXT O N N 392 TYR H H N N 393 TYR H2 H N N 394 TYR HA H N N 395 TYR HB2 H N N 396 TYR HB3 H N N 397 TYR HD1 H N N 398 TYR HD2 H N N 399 TYR HE1 H N N 400 TYR HE2 H N N 401 TYR HH H N N 402 TYR HXT H N N 403 VAL N N N N 404 VAL CA C N S 405 VAL C C N N 406 VAL O O N N 407 VAL CB C N N 408 VAL CG1 C N N 409 VAL CG2 C N N 410 VAL OXT O N N 411 VAL H H N N 412 VAL H2 H N N 413 VAL HA H N N 414 VAL HB H N N 415 VAL HG11 H N N 416 VAL HG12 H N N 417 VAL HG13 H N N 418 VAL HG21 H N N 419 VAL HG22 H N N 420 VAL HG23 H N N 421 VAL HXT H N N 422 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TRS C C1 sing N N 343 TRS C C2 sing N N 344 TRS C C3 sing N N 345 TRS C N sing N N 346 TRS C1 O1 sing N N 347 TRS C1 H11 sing N N 348 TRS C1 H12 sing N N 349 TRS C2 O2 sing N N 350 TRS C2 H21 sing N N 351 TRS C2 H22 sing N N 352 TRS C3 O3 sing N N 353 TRS C3 H31 sing N N 354 TRS C3 H32 sing N N 355 TRS N HN1 sing N N 356 TRS N HN2 sing N N 357 TRS N HN3 sing N N 358 TRS O1 HO1 sing N N 359 TRS O2 HO2 sing N N 360 TRS O3 HO3 sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'P01 CA092584' 1 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'R35 CA220430' 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code AF-Q7L9B9-F1 _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'C 1 2 1' _space_group.name_Hall 'C 2y' _space_group.IT_number 5 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 9YSF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.011452 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004172 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020743 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014442 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CL ? ? 9.50761 7.44341 ? ? 1.04373 23.83732 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 8.66788 8.58341 1.68052 ? 12.31593 0.56275 110.00227 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? 9.41153 2.53737 ? ? 2.59044 63.03566 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #