data_9YXA # _entry.id 9YXA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9YXA pdb_00009yxa 10.2210/pdb9yxa/pdb WWPDB D_1000301548 ? ? EMDB EMD-73601 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-08-26 ? 2 'EM metadata' 1 0 2026-08-26 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9YXA _pdbx_database_status.recvd_initial_deposition_date 2025-10-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'BtCoV SL5 with SL5c truncated' _pdbx_database_related.db_id EMD-73601 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email rhiju@stanford.edu _pdbx_contact_author.name_first Rhiju _pdbx_contact_author.name_last Das _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7497-0972 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kretsch, R.C.' 1 0000-0002-6935-518X 'Xu, L.' 2 0000-0002-1200-8937 'Chiu, W.' 3 0000-0002-8910-3078 'Das, R.' 4 0000-0001-7497-0972 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Assessment of nucleic acid structure prediction in CASP16' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kretsch, R.C.' 1 0000-0002-6935-518X primary 'Hummer, A.M.' 2 0000-0002-3023-2588 primary 'He, S.' 3 0000-0003-1010-536X primary 'Yuan, R.' 4 0000-0001-5917-4505 primary 'Zhang, J.' 5 0000-0003-4190-3065 primary 'Karagianes, T.' 6 ? primary 'Cong, Q.' 7 0000-0002-8909-0414 primary 'Kryshtafovych, A.' 8 0000-0001-5066-7178 primary 'Das, R.' 9 0000-0001-7497-0972 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'RNA (127-MER)' _entity.formula_weight 40908.141 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGAGCAUCGUGUCUCAAGUGCUUCACGGUCACAAUAUACCGUUUCGUCGGGUGCGUGGCAAUUCGGUGCACAUCAUGUCU UUCGUGGCUGGUGUGGUCAAGGUGCGACAAGUAUAGAGCAGAGCUCC ; _entity_poly.pdbx_seq_one_letter_code_can ;GGAGCAUCGUGUCUCAAGUGCUUCACGGUCACAAUAUACCGUUUCGUCGGGUGCGUGGCAAUUCGGUGCACAUCAUGUCU UUCGUGGCUGGUGUGGUCAAGGUGCGACAAGUAUAGAGCAGAGCUCC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 G n 1 5 C n 1 6 A n 1 7 U n 1 8 C n 1 9 G n 1 10 U n 1 11 G n 1 12 U n 1 13 C n 1 14 U n 1 15 C n 1 16 A n 1 17 A n 1 18 G n 1 19 U n 1 20 G n 1 21 C n 1 22 U n 1 23 U n 1 24 C n 1 25 A n 1 26 C n 1 27 G n 1 28 G n 1 29 U n 1 30 C n 1 31 A n 1 32 C n 1 33 A n 1 34 A n 1 35 U n 1 36 A n 1 37 U n 1 38 A n 1 39 C n 1 40 C n 1 41 G n 1 42 U n 1 43 U n 1 44 U n 1 45 C n 1 46 G n 1 47 U n 1 48 C n 1 49 G n 1 50 G n 1 51 G n 1 52 U n 1 53 G n 1 54 C n 1 55 G n 1 56 U n 1 57 G n 1 58 G n 1 59 C n 1 60 A n 1 61 A n 1 62 U n 1 63 U n 1 64 C n 1 65 G n 1 66 G n 1 67 U n 1 68 G n 1 69 C n 1 70 A n 1 71 C n 1 72 A n 1 73 U n 1 74 C n 1 75 A n 1 76 U n 1 77 G n 1 78 U n 1 79 C n 1 80 U n 1 81 U n 1 82 U n 1 83 C n 1 84 G n 1 85 U n 1 86 G n 1 87 G n 1 88 C n 1 89 U n 1 90 G n 1 91 G n 1 92 U n 1 93 G n 1 94 U n 1 95 G n 1 96 G n 1 97 U n 1 98 C n 1 99 A n 1 100 A n 1 101 G n 1 102 G n 1 103 U n 1 104 G n 1 105 C n 1 106 G n 1 107 A n 1 108 C n 1 109 A n 1 110 A n 1 111 G n 1 112 U n 1 113 A n 1 114 U n 1 115 A n 1 116 G n 1 117 A n 1 118 G n 1 119 C n 1 120 A n 1 121 G n 1 122 A n 1 123 G n 1 124 C n 1 125 U n 1 126 C n 1 127 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 127 _pdbx_entity_src_syn.organism_scientific 'Pipistrellus bat coronavirus HKU5' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 694008 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 A 3 3 3 A A A . n A 1 4 G 4 4 4 G G A . n A 1 5 C 5 5 5 C C A . n A 1 6 A 6 6 6 A A A . n A 1 7 U 7 7 7 U U A . n A 1 8 C 8 8 8 C C A . n A 1 9 G 9 9 9 G G A . n A 1 10 U 10 10 10 U U A . n A 1 11 G 11 11 11 G G A . n A 1 12 U 12 12 12 U U A . n A 1 13 C 13 13 13 C C A . n A 1 14 U 14 14 14 U U A . n A 1 15 C 15 15 15 C C A . n A 1 16 A 16 16 16 A A A . n A 1 17 A 17 17 17 A A A . n A 1 18 G 18 18 18 G G A . n A 1 19 U 19 19 19 U U A . n A 1 20 G 20 20 20 G G A . n A 1 21 C 21 21 21 C C A . n A 1 22 U 22 22 22 U U A . n A 1 23 U 23 23 23 U U A . n A 1 24 C 24 24 24 C C A . n A 1 25 A 25 25 25 A A A . n A 1 26 C 26 26 26 C C A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 U 29 29 29 U U A . n A 1 30 C 30 30 30 C C A . n A 1 31 A 31 31 31 A A A . n A 1 32 C 32 32 32 C C A . n A 1 33 A 33 33 33 A A A . n A 1 34 A 34 34 34 A A A . n A 1 35 U 35 35 35 U U A . n A 1 36 A 36 36 36 A A A . n A 1 37 U 37 37 37 U U A . n A 1 38 A 38 38 38 A A A . n A 1 39 C 39 39 39 C C A . n A 1 40 C 40 40 40 C C A . n A 1 41 G 41 41 41 G G A . n A 1 42 U 42 42 42 U U A . n A 1 43 U 43 43 43 U U A . n A 1 44 U 44 44 44 U U A . n A 1 45 C 45 45 45 C C A . n A 1 46 G 46 46 46 G G A . n A 1 47 U 47 47 47 U U A . n A 1 48 C 48 48 48 C C A . n A 1 49 G 49 49 49 G G A . n A 1 50 G 50 50 50 G G A . n A 1 51 G 51 51 51 G G A . n A 1 52 U 52 52 52 U U A . n A 1 53 G 53 53 53 G G A . n A 1 54 C 54 54 54 C C A . n A 1 55 G 55 55 55 G G A . n A 1 56 U 56 56 56 U U A . n A 1 57 G 57 57 57 G G A . n A 1 58 G 58 58 58 G G A . n A 1 59 C 59 59 59 C C A . n A 1 60 A 60 60 60 A A A . n A 1 61 A 61 61 61 A A A . n A 1 62 U 62 62 62 U U A . n A 1 63 U 63 63 63 U U A . n A 1 64 C 64 64 64 C C A . n A 1 65 G 65 65 65 G G A . n A 1 66 G 66 66 66 G G A . n A 1 67 U 67 67 67 U U A . n A 1 68 G 68 68 68 G G A . n A 1 69 C 69 69 69 C C A . n A 1 70 A 70 70 70 A A A . n A 1 71 C 71 71 71 C C A . n A 1 72 A 72 72 72 A A A . n A 1 73 U 73 73 73 U U A . n A 1 74 C 74 74 74 C C A . n A 1 75 A 75 75 75 A A A . n A 1 76 U 76 76 76 U U A . n A 1 77 G 77 77 77 G G A . n A 1 78 U 78 78 78 U U A . n A 1 79 C 79 79 79 C C A . n A 1 80 U 80 80 80 U U A . n A 1 81 U 81 81 81 U U A . n A 1 82 U 82 82 82 U U A . n A 1 83 C 83 83 83 C C A . n A 1 84 G 84 84 84 G G A . n A 1 85 U 85 85 85 U U A . n A 1 86 G 86 86 86 G G A . n A 1 87 G 87 87 87 G G A . n A 1 88 C 88 88 88 C C A . n A 1 89 U 89 89 89 U U A . n A 1 90 G 90 90 90 G G A . n A 1 91 G 91 91 91 G G A . n A 1 92 U 92 92 92 U U A . n A 1 93 G 93 93 93 G G A . n A 1 94 U 94 94 94 U U A . n A 1 95 G 95 95 95 G G A . n A 1 96 G 96 96 96 G G A . n A 1 97 U 97 97 97 U U A . n A 1 98 C 98 98 98 C C A . n A 1 99 A 99 99 99 A A A . n A 1 100 A 100 100 100 A A A . n A 1 101 G 101 101 101 G G A . n A 1 102 G 102 102 102 G G A . n A 1 103 U 103 103 103 U U A . n A 1 104 G 104 104 104 G G A . n A 1 105 C 105 105 105 C C A . n A 1 106 G 106 106 106 G G A . n A 1 107 A 107 107 107 A A A . n A 1 108 C 108 108 108 C C A . n A 1 109 A 109 109 109 A A A . n A 1 110 A 110 110 110 A A A . n A 1 111 G 111 111 111 G G A . n A 1 112 U 112 112 112 U U A . n A 1 113 A 113 113 113 A A A . n A 1 114 U 114 114 114 U U A . n A 1 115 A 115 115 115 A A A . n A 1 116 G 116 116 116 G G A . n A 1 117 A 117 117 117 A A A . n A 1 118 G 118 118 118 G G A . n A 1 119 C 119 119 119 C C A . n A 1 120 A 120 120 120 A A A . n A 1 121 G 121 121 121 G G A . n A 1 122 A 122 122 122 A A A . n A 1 123 G 123 123 123 G G A . n A 1 124 C 124 124 124 C C A . n A 1 125 U 125 125 125 U U A . n A 1 126 C 126 126 126 C C A . n A 1 127 C 127 127 127 C C A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9YXA _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9YXA _struct.title 'BtCoV SL5 with SL5c truncated' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9YXA _struct_keywords.text 'RNA, SL5, BtCoV' _struct_keywords.pdbx_keywords RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code NC_009020.1 _struct_ref.pdbx_db_accession 126030122 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AGAGCAUCGUGUCUCAAGUGCUUCACGGUCACAAUAUACCGUUUCGUCGGGUGCGUGGCAAUUCGGUGCACAUCAUGUCU UUCGUGGCUGGUGUGGCUCCUCAAGGUGCGAGGGGCAAGUAUAGAGCAGAGCUCA ; _struct_ref.pdbx_align_begin 187 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9YXA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 126030122 _struct_ref_seq.db_align_beg 187 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 321 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 127 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9YXA G A 1 ? GB 126030122 A 187 conflict 1 1 1 9YXA ? A ? ? GB 126030122 C 283 deletion ? 2 1 9YXA ? A ? ? GB 126030122 U 284 deletion ? 3 1 9YXA ? A ? ? GB 126030122 C 285 deletion ? 4 1 9YXA ? A ? ? GB 126030122 C 286 deletion ? 5 1 9YXA ? A ? ? GB 126030122 G 298 deletion ? 6 1 9YXA ? A ? ? GB 126030122 G 299 deletion ? 7 1 9YXA ? A ? ? GB 126030122 G 300 deletion ? 8 1 9YXA ? A ? ? GB 126030122 G 301 deletion ? 9 1 9YXA C A 127 ? GB 126030122 A 321 conflict 127 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 127 N3 ? ? A G 1 A C 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 127 O2 ? ? A G 1 A C 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 127 N4 ? ? A G 1 A C 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 126 N3 ? ? A G 2 A C 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 126 O2 ? ? A G 2 A C 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 126 N4 ? ? A G 2 A C 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 125 N3 ? ? A A 3 A U 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 125 O4 ? ? A A 3 A U 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 124 N3 ? ? A G 4 A C 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 124 O2 ? ? A G 4 A C 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 124 N4 ? ? A G 4 A C 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 123 N1 ? ? A C 5 A G 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 123 O6 ? ? A C 5 A G 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 123 N2 ? ? A C 5 A G 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 6 N1 ? ? ? 1_555 A A 120 N6 ? ? A A 6 A A 120 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog16 hydrog ? ? A A 6 N6 ? ? ? 1_555 A A 120 N7 ? ? A A 6 A A 120 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog17 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 122 N1 ? ? A U 7 A A 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 122 N6 ? ? A U 7 A A 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 121 N1 ? ? A C 8 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 121 O6 ? ? A C 8 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 121 N2 ? ? A C 8 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 10 N3 ? ? ? 1_555 A A 120 N1 ? ? A U 10 A A 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 10 O4 ? ? ? 1_555 A A 120 N6 ? ? A U 10 A A 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 119 N3 ? ? A G 11 A C 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 119 O2 ? ? A G 11 A C 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 119 N4 ? ? A G 11 A C 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 118 N1 ? ? A C 13 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 118 O6 ? ? A C 13 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 118 N2 ? ? A C 13 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 14 N3 ? ? ? 1_555 A A 117 N1 ? ? A U 14 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 14 O4 ? ? ? 1_555 A A 117 N6 ? ? A U 14 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 116 N1 ? ? A C 15 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 116 O6 ? ? A C 15 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 116 N2 ? ? A C 15 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A A 16 N6 ? ? ? 1_555 A U 112 O4 ? ? A A 16 A U 112 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog36 hydrog ? ? A A 16 N1 ? ? ? 1_555 A A 113 N6 ? ? A A 16 A A 113 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog37 hydrog ? ? A G 18 N1 ? ? ? 1_555 A U 114 O2 ? ? A G 18 A U 114 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog38 hydrog ? ? A G 18 O6 ? ? ? 1_555 A U 114 N3 ? ? A G 18 A U 114 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog39 hydrog ? ? A U 19 N3 ? ? ? 1_555 A A 113 N1 ? ? A U 19 A A 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A U 19 O4 ? ? ? 1_555 A A 113 N6 ? ? A U 19 A A 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 20 N1 ? ? ? 1_555 A U 112 O2 ? ? A G 20 A U 112 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog42 hydrog ? ? A G 20 O6 ? ? ? 1_555 A U 112 N3 ? ? A G 20 A U 112 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog43 hydrog ? ? A C 21 N3 ? ? ? 1_555 A G 111 N1 ? ? A C 21 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 21 N4 ? ? ? 1_555 A G 111 O6 ? ? A C 21 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 21 O2 ? ? ? 1_555 A G 111 N2 ? ? A C 21 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 22 N3 ? ? ? 1_555 A A 110 N1 ? ? A U 22 A A 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A U 22 O4 ? ? ? 1_555 A A 110 N6 ? ? A U 22 A A 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 23 N3 ? ? ? 1_555 A A 109 N1 ? ? A U 23 A A 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A U 23 O4 ? ? ? 1_555 A A 109 N6 ? ? A U 23 A A 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 24 N3 ? ? ? 1_555 A G 68 N1 ? ? A C 24 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 68 O6 ? ? A C 24 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 68 N2 ? ? A C 24 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A A 25 N1 ? ? ? 1_555 A U 67 N3 ? ? A A 25 A U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A A 25 N6 ? ? ? 1_555 A U 67 O4 ? ? A A 25 A U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A C 26 N3 ? ? ? 1_555 A G 65 N1 ? ? A C 26 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 26 N4 ? ? ? 1_555 A G 65 O6 ? ? A C 26 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 26 O2 ? ? ? 1_555 A G 65 N2 ? ? A C 26 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 64 N3 ? ? A G 27 A C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 64 O2 ? ? A G 27 A C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 64 N4 ? ? A G 27 A C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 28 N1 ? ? ? 1_555 A C 59 N3 ? ? A G 28 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 28 N2 ? ? ? 1_555 A C 59 O2 ? ? A G 28 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 28 O6 ? ? ? 1_555 A C 59 N4 ? ? A G 28 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A U 29 N3 ? ? ? 1_555 A G 58 O6 ? ? A U 29 A G 58 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog65 hydrog ? ? A U 29 O2 ? ? ? 1_555 A G 58 N1 ? ? A U 29 A G 58 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog66 hydrog ? ? A C 30 N3 ? ? ? 1_555 A G 57 N1 ? ? A C 30 A G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 30 N4 ? ? ? 1_555 A G 57 O6 ? ? A C 30 A G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 30 O2 ? ? ? 1_555 A G 57 N2 ? ? A C 30 A G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A A 31 N1 ? ? ? 1_555 A U 56 N3 ? ? A A 31 A U 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A A 31 N6 ? ? ? 1_555 A U 56 O4 ? ? A A 31 A U 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 55 N1 ? ? A C 32 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 55 O6 ? ? A C 32 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 55 N2 ? ? A C 32 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A A 33 N1 ? ? ? 1_555 A C 54 N4 ? ? A A 33 A C 54 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog75 hydrog ? ? A A 34 N3 ? ? ? 1_555 A C 54 N4 ? ? A A 34 A C 54 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog76 hydrog ? ? A U 37 N3 ? ? ? 1_555 A G 53 O6 ? ? A U 37 A G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog77 hydrog ? ? A U 37 O2 ? ? ? 1_555 A G 53 N1 ? ? A U 37 A G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog78 hydrog ? ? A A 38 N1 ? ? ? 1_555 A U 52 N3 ? ? A A 38 A U 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A A 38 N6 ? ? ? 1_555 A U 52 O4 ? ? A A 38 A U 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 39 N3 ? ? ? 1_555 A G 51 N1 ? ? A C 39 A G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 39 N4 ? ? ? 1_555 A G 51 O6 ? ? A C 39 A G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 39 O2 ? ? ? 1_555 A G 51 N2 ? ? A C 39 A G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 49 N1 ? ? A C 40 A G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 49 O6 ? ? A C 40 A G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 49 N2 ? ? A C 40 A G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A G 41 N1 ? ? ? 1_555 A C 48 N3 ? ? A G 41 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 48 O2 ? ? A G 41 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 41 O6 ? ? ? 1_555 A C 48 N4 ? ? A G 41 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A U 42 O2 ? ? ? 1_555 A C 45 N4 ? ? A U 42 A C 45 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog90 hydrog ? ? A A 60 N6 ? ? ? 1_555 A G 96 N7 ? ? A A 60 A G 96 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog91 hydrog ? ? A A 60 N6 ? ? ? 1_555 A U 97 O4 ? ? A A 60 A U 97 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog92 hydrog ? ? A A 61 N1 ? ? ? 1_555 A C 98 N4 ? ? A A 61 A C 98 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog93 hydrog ? ? A A 61 N6 ? ? ? 1_555 A U 103 O4 ? ? A A 61 A U 103 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog94 hydrog ? ? A G 66 N1 ? ? ? 1_555 A G 93 N7 ? ? A G 66 A G 93 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog95 hydrog ? ? A G 66 N2 ? ? ? 1_555 A G 93 O6 ? ? A G 66 A G 93 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog96 hydrog ? ? A C 69 N3 ? ? ? 1_555 A G 95 N1 ? ? A C 69 A G 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A C 69 N4 ? ? ? 1_555 A G 95 O6 ? ? A C 69 A G 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A C 69 O2 ? ? ? 1_555 A G 95 N2 ? ? A C 69 A G 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A A 70 N1 ? ? ? 1_555 A U 94 N3 ? ? A A 70 A U 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A A 70 N6 ? ? ? 1_555 A U 94 O4 ? ? A A 70 A U 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A C 71 N3 ? ? ? 1_555 A G 93 N1 ? ? A C 71 A G 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 71 N4 ? ? ? 1_555 A G 93 O6 ? ? A C 71 A G 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A C 71 O2 ? ? ? 1_555 A G 93 N2 ? ? A C 71 A G 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A A 72 N1 ? ? ? 1_555 A U 92 N3 ? ? A A 72 A U 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A A 72 N6 ? ? ? 1_555 A U 92 O4 ? ? A A 72 A U 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A U 73 N3 ? ? ? 1_555 A G 91 O6 ? ? A U 73 A G 91 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog107 hydrog ? ? A U 73 O2 ? ? ? 1_555 A G 91 N1 ? ? A U 73 A G 91 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog108 hydrog ? ? A C 74 N3 ? ? ? 1_555 A G 90 N1 ? ? A C 74 A G 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A C 74 N4 ? ? ? 1_555 A G 90 O6 ? ? A C 74 A G 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A C 74 O2 ? ? ? 1_555 A G 90 N2 ? ? A C 74 A G 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A A 75 N1 ? ? ? 1_555 A U 89 N3 ? ? A A 75 A U 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A A 75 N6 ? ? ? 1_555 A U 89 O4 ? ? A A 75 A U 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A G 77 N1 ? ? ? 1_555 A C 88 N3 ? ? A G 77 A C 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A G 77 N2 ? ? ? 1_555 A C 88 O2 ? ? A G 77 A C 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A G 77 O6 ? ? ? 1_555 A C 88 N4 ? ? A G 77 A C 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A U 78 N3 ? ? ? 1_555 A G 87 O6 ? ? A U 78 A G 87 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog117 hydrog ? ? A U 78 O2 ? ? ? 1_555 A G 87 N1 ? ? A U 78 A G 87 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog118 hydrog ? ? A C 79 N3 ? ? ? 1_555 A G 86 N1 ? ? A C 79 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A C 79 N4 ? ? ? 1_555 A G 86 O6 ? ? A C 79 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? A C 79 O2 ? ? ? 1_555 A G 86 N2 ? ? A C 79 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? A G 96 N1 ? ? ? 1_555 A C 108 N3 ? ? A G 96 A C 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? A G 96 N2 ? ? ? 1_555 A C 108 O2 ? ? A G 96 A C 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? A G 96 O6 ? ? ? 1_555 A C 108 N4 ? ? A G 96 A C 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A U 97 O4 ? ? ? 1_555 A G 104 N2 ? ? A U 97 A G 104 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog125 hydrog ? ? A U 97 N3 ? ? ? 1_555 A A 107 N1 ? ? A U 97 A A 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A U 97 O4 ? ? ? 1_555 A A 107 N6 ? ? A U 97 A A 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A C 98 N3 ? ? ? 1_555 A G 106 N1 ? ? A C 98 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A C 98 N4 ? ? ? 1_555 A G 106 O6 ? ? A C 98 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A C 98 O2 ? ? ? 1_555 A G 106 N2 ? ? A C 98 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A A 99 N1 ? ? ? 1_555 A U 103 N3 ? ? A A 99 A U 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A A 99 N6 ? ? ? 1_555 A U 103 O4 ? ? A A 99 A U 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9YXA _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "HO2'" A A 34 ? ? O4 A U 37 ? ? 1.58 2 1 "C3'" A C 105 ? ? OP2 A G 106 ? ? 1.75 3 1 "C3'" A U 47 ? ? OP1 A C 48 ? ? 1.76 4 1 "O4'" A U 35 ? ? O6 A G 49 ? ? 2.13 5 2 "HO2'" A G 53 ? ? O2 A C 54 ? ? 1.59 6 3 "C3'" A U 63 ? ? OP1 A C 64 ? ? 1.53 7 3 OP2 A A 61 ? ? "O2'" A G 101 ? ? 2.11 8 5 "O2'" A A 38 ? ? OP2 A C 40 ? ? 2.12 9 5 "O2'" A C 59 ? ? O2 A U 103 ? ? 2.14 10 7 "O2'" A C 59 ? ? OP2 A G 104 ? ? 2.10 11 8 "C3'" A A 6 ? ? OP1 A U 7 ? ? 1.55 12 8 OP1 A U 62 ? ? H42 A C 108 ? ? 1.58 13 8 "O2'" A G 65 ? ? OP2 A G 93 ? ? 2.14 14 8 "O2'" A A 60 ? ? "O2'" A C 105 ? ? 2.19 15 10 "HO2'" A A 61 ? ? OP2 A U 97 ? ? 1.56 16 10 "O2'" A A 6 ? ? O6 A G 9 ? ? 2.15 17 10 "O2'" A C 59 ? ? OP2 A G 104 ? ? 2.17 18 11 "C3'" A G 9 ? ? OP2 A U 10 ? ? 1.58 19 11 "O2'" A U 85 ? ? OP2 A G 87 ? ? 2.12 20 12 "O2'" A A 6 ? ? OP2 A C 8 ? ? 2.16 21 14 "C3'" A A 115 ? ? OP1 A G 116 ? ? 1.43 22 14 "C3'" A C 105 ? ? OP1 A G 106 ? ? 1.73 23 14 "C3'" A U 76 ? ? OP1 A G 77 ? ? 1.79 24 15 "HO2'" A G 65 ? ? OP2 A U 67 ? ? 1.49 25 15 "C3'" A A 34 ? ? OP2 A U 35 ? ? 1.51 26 15 "HO2'" A A 38 ? ? OP2 A C 40 ? ? 1.58 27 15 "C3'" A U 85 ? ? OP1 A G 86 ? ? 1.68 28 15 "C3'" A G 9 ? ? OP1 A U 10 ? ? 1.68 29 15 "O2'" A U 12 ? ? OP2 A U 14 ? ? 2.16 30 15 "O2'" A G 65 ? ? OP2 A U 67 ? ? 2.17 31 16 "O2'" A C 105 ? ? OP1 A G 106 ? ? 1.63 32 16 O2 A U 62 ? ? "O2'" A A 100 ? ? 2.07 33 17 "O4'" A A 60 ? ? OP2 A C 105 ? ? 2.15 34 17 O2 A U 63 ? ? "O2'" A A 100 ? ? 2.18 35 18 "C3'" A A 17 ? ? OP2 A G 18 ? ? 1.43 36 18 "O2'" A A 34 ? ? "HO2'" A U 47 ? ? 1.44 37 18 "C3'" A U 85 ? ? OP2 A G 86 ? ? 1.53 38 18 "C3'" A C 105 ? ? OP2 A G 106 ? ? 1.62 39 18 "O2'" A A 25 ? ? OP1 A C 26 ? ? 1.76 40 18 "O2'" A A 6 ? ? OP2 A C 8 ? ? 2.10 41 20 "C3'" A A 17 ? ? OP2 A G 18 ? ? 1.47 42 20 "C3'" A A 6 ? ? OP2 A U 7 ? ? 1.49 43 20 "HO2'" A U 62 ? ? O4 A U 97 ? ? 1.59 44 20 "C3'" A A 34 ? ? OP2 A U 35 ? ? 1.63 45 20 "C3'" A G 65 ? ? OP1 A G 66 ? ? 1.71 46 21 "C3'" A U 76 ? ? OP1 A G 77 ? ? 1.31 47 21 "H3'" A U 76 ? ? OP1 A G 77 ? ? 1.49 48 21 "O2'" A U 63 ? ? OP2 A G 65 ? ? 2.13 49 22 "C3'" A U 63 ? ? OP1 A C 64 ? ? 1.59 50 22 "C3'" A A 34 ? ? OP2 A U 35 ? ? 1.61 51 22 "O2'" A A 6 ? ? OP1 A A 117 ? ? 2.14 52 23 "C3'" A A 115 ? ? OP2 A G 116 ? ? 1.39 53 23 "C3'" A U 85 ? ? OP2 A G 86 ? ? 1.55 54 23 "C3'" A A 17 ? ? OP1 A G 18 ? ? 1.64 55 23 "O2'" A C 105 ? ? OP2 A A 107 ? ? 2.19 56 24 "HO2'" A C 54 ? ? OP2 A U 56 ? ? 1.58 57 24 "O2'" A U 43 ? ? O6 A G 46 ? ? 2.19 58 25 "HO2'" A A 34 ? ? OP2 A U 35 ? ? 1.55 59 25 "C3'" A A 34 ? ? OP1 A U 35 ? ? 1.64 60 26 "O2'" A G 65 ? ? OP2 A U 67 ? ? 2.08 61 26 "O2'" A U 81 ? ? "O4'" A C 83 ? ? 2.13 62 27 OP2 A U 73 ? ? "HO2'" A U 85 ? ? 1.58 63 27 "C3'" A U 76 ? ? OP1 A G 77 ? ? 1.80 64 27 OP2 A U 73 ? ? "O2'" A U 85 ? ? 2.12 65 28 "C3'" A G 65 ? ? OP2 A G 66 ? ? 1.33 66 28 "C3'" A A 6 ? ? OP2 A U 7 ? ? 1.48 67 29 "C3'" A A 34 ? ? OP2 A U 35 ? ? 1.53 68 29 N6 A A 34 ? ? "O2'" A G 46 ? ? 2.14 69 30 "C3'" A A 36 ? ? OP2 A U 37 ? ? 1.22 70 30 "C3'" A U 76 ? ? OP1 A G 77 ? ? 1.73 71 30 "O2'" A G 104 ? ? O6 A G 106 ? ? 2.06 72 30 "O2'" A U 44 ? ? O6 A G 46 ? ? 2.11 73 30 "O4'" A U 35 ? ? O6 A G 49 ? ? 2.13 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 17 "C2'" A A 61 ? ? "C1'" A A 61 ? ? 1.477 1.526 -0.049 0.008 N 2 21 "O3'" A U 76 ? ? P A G 77 ? ? 1.514 1.607 -0.093 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" A A 17 ? ? P A G 18 ? ? OP2 A G 18 ? ? 91.38 105.20 -13.82 2.20 Y 2 1 "O3'" A A 17 ? ? P A G 18 ? ? OP1 A G 18 ? ? 119.63 110.50 9.13 1.10 Y 3 1 "C2'" A A 36 ? ? "C3'" A A 36 ? ? "O3'" A A 36 ? ? 123.44 113.70 9.74 1.60 N 4 1 "O3'" A A 36 ? ? P A U 37 ? ? OP2 A U 37 ? ? 91.72 105.20 -13.48 2.20 Y 5 1 "O3'" A A 36 ? ? P A U 37 ? ? OP1 A U 37 ? ? 119.04 110.50 8.54 1.10 Y 6 1 "O3'" A U 47 ? ? P A C 48 ? ? OP1 A C 48 ? ? 24.30 105.20 -80.90 2.20 Y 7 1 "O3'" A U 85 ? ? P A G 86 ? ? OP2 A G 86 ? ? 43.67 105.20 -61.53 2.20 Y 8 1 "O3'" A U 85 ? ? P A G 86 ? ? OP1 A G 86 ? ? 142.80 110.50 32.30 1.10 Y 9 1 "O3'" A C 105 ? ? P A G 106 ? ? OP2 A G 106 ? ? 11.91 105.20 -93.29 2.20 Y 10 1 "O3'" A C 105 ? ? P A G 106 ? ? OP1 A G 106 ? ? 128.27 110.50 17.77 1.10 Y 11 1 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 91.17 105.20 -14.03 2.20 Y 12 1 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 119.72 110.50 9.22 1.10 Y 13 1 "O3'" A G 118 ? ? P A C 119 ? ? OP2 A C 119 ? ? 90.60 105.20 -14.60 2.20 Y 14 1 "O3'" A G 118 ? ? P A C 119 ? ? OP1 A C 119 ? ? 120.17 110.50 9.67 1.10 Y 15 1 "O3'" A A 120 ? ? P A G 121 ? ? OP1 A G 121 ? ? 30.01 105.20 -75.19 2.20 Y 16 2 "O4'" A A 38 ? ? "C1'" A A 38 ? ? N9 A A 38 ? ? 103.00 108.20 -5.20 0.80 N 17 3 "O3'" A A 6 ? ? P A U 7 ? ? OP2 A U 7 ? ? 91.61 105.20 -13.59 2.20 Y 18 3 "O3'" A A 6 ? ? P A U 7 ? ? OP1 A U 7 ? ? 119.18 110.50 8.68 1.10 Y 19 3 "O3'" A A 17 ? ? P A G 18 ? ? OP1 A G 18 ? ? 118.84 110.50 8.34 1.10 Y 20 3 "O3'" A U 47 ? ? P A C 48 ? ? OP2 A C 48 ? ? 60.24 105.20 -44.96 2.20 Y 21 3 "O3'" A U 47 ? ? P A C 48 ? ? OP1 A C 48 ? ? 62.93 105.20 -42.27 2.20 Y 22 3 "C3'" A U 63 ? ? "C2'" A U 63 ? ? "C1'" A U 63 ? ? 95.92 101.30 -5.38 0.70 N 23 3 "O3'" A U 63 ? ? P A C 64 ? ? OP2 A C 64 ? ? 121.22 110.50 10.72 1.10 Y 24 3 "O3'" A U 63 ? ? P A C 64 ? ? OP1 A C 64 ? ? 3.01 105.20 -102.19 2.20 Y 25 3 "O3'" A C 105 ? ? P A G 106 ? ? OP2 A G 106 ? ? 119.88 110.50 9.38 1.10 Y 26 3 "O3'" A C 105 ? ? P A G 106 ? ? OP1 A G 106 ? ? 90.90 105.20 -14.30 2.20 Y 27 3 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 86.44 105.20 -18.76 2.20 Y 28 3 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 36.22 105.20 -68.98 2.20 Y 29 5 "O3'" A G 9 ? ? P A U 10 ? ? OP2 A U 10 ? ? 55.04 105.20 -50.16 2.20 Y 30 5 "O3'" A G 9 ? ? P A U 10 ? ? OP1 A U 10 ? ? 67.97 105.20 -37.23 2.20 Y 31 5 "O3'" A U 47 ? ? P A C 48 ? ? OP2 A C 48 ? ? 142.42 110.50 31.92 1.10 Y 32 5 "O3'" A U 47 ? ? P A C 48 ? ? OP1 A C 48 ? ? 51.46 105.20 -53.74 2.20 Y 33 5 "O3'" A C 54 ? ? P A G 55 ? ? OP2 A G 55 ? ? 85.98 105.20 -19.22 2.20 Y 34 5 "O3'" A C 54 ? ? P A G 55 ? ? OP1 A G 55 ? ? 36.73 105.20 -68.47 2.20 Y 35 5 "O3'" A U 63 ? ? P A C 64 ? ? OP2 A C 64 ? ? 78.03 105.20 -27.17 2.20 Y 36 5 "O3'" A U 63 ? ? P A C 64 ? ? OP1 A C 64 ? ? 130.11 110.50 19.61 1.10 Y 37 5 "O3'" A U 76 ? ? P A G 77 ? ? OP2 A G 77 ? ? 123.73 110.50 13.23 1.10 Y 38 5 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 86.28 105.20 -18.92 2.20 Y 39 5 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 142.48 110.50 31.98 1.10 Y 40 5 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 51.46 105.20 -53.74 2.20 Y 41 7 "C3'" A A 16 ? ? "O3'" A A 16 ? ? P A A 17 ? ? 126.98 119.70 7.28 1.20 Y 42 8 "O3'" A A 6 ? ? P A U 7 ? ? OP2 A U 7 ? ? 121.56 110.50 11.06 1.10 Y 43 8 "O3'" A A 6 ? ? P A U 7 ? ? OP1 A U 7 ? ? 3.30 105.20 -101.90 2.20 Y 44 8 "O3'" A G 9 ? ? P A U 10 ? ? OP2 A U 10 ? ? 142.55 110.50 32.05 1.10 Y 45 8 "O3'" A G 9 ? ? P A U 10 ? ? OP1 A U 10 ? ? 51.34 105.20 -53.86 2.20 Y 46 8 "O3'" A U 12 ? ? P A C 13 ? ? OP2 A C 13 ? ? 64.44 105.20 -40.76 2.20 Y 47 8 "O3'" A U 12 ? ? P A C 13 ? ? OP1 A C 13 ? ? 58.68 105.20 -46.52 2.20 Y 48 8 "O3'" A A 17 ? ? P A G 18 ? ? OP2 A G 18 ? ? 142.58 110.50 32.08 1.10 Y 49 8 "O3'" A A 17 ? ? P A G 18 ? ? OP1 A G 18 ? ? 51.48 105.20 -53.72 2.20 Y 50 8 "O3'" A A 34 ? ? P A U 35 ? ? OP1 A U 35 ? ? 117.82 110.50 7.32 1.10 Y 51 8 "C4'" A U 42 ? ? "C3'" A U 42 ? ? "C2'" A U 42 ? ? 95.95 102.60 -6.65 1.00 N 52 8 "O4'" A U 63 ? ? "C1'" A U 63 ? ? N1 A U 63 ? ? 113.02 108.50 4.52 0.70 N 53 8 "O3'" A U 76 ? ? P A G 77 ? ? OP2 A G 77 ? ? 87.78 105.20 -17.42 2.20 Y 54 8 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 34.79 105.20 -70.41 2.20 Y 55 8 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 23.87 105.20 -81.33 2.20 Y 56 11 "O3'" A G 9 ? ? P A U 10 ? ? OP2 A U 10 ? ? 5.39 105.20 -99.81 2.20 Y 57 11 "O3'" A G 9 ? ? P A U 10 ? ? OP1 A U 10 ? ? 123.25 110.50 12.75 1.10 Y 58 11 "O3'" A U 76 ? ? P A G 77 ? ? OP2 A G 77 ? ? 86.51 105.20 -18.69 2.20 Y 59 11 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 123.70 110.50 13.20 1.10 Y 60 11 "C5'" A G 102 ? ? "C4'" A G 102 ? ? "O4'" A G 102 ? ? 116.56 109.80 6.76 0.90 N 61 11 "O3'" A C 105 ? ? P A G 106 ? ? OP2 A G 106 ? ? 56.26 105.20 -48.94 2.20 Y 62 11 "O3'" A C 105 ? ? P A G 106 ? ? OP1 A G 106 ? ? 141.57 110.50 31.07 1.10 Y 63 14 "O3'" A G 66 ? ? P A U 67 ? ? OP2 A U 67 ? ? 90.49 105.20 -14.71 2.20 Y 64 14 "O3'" A G 66 ? ? P A U 67 ? ? OP1 A U 67 ? ? 31.97 105.20 -73.23 2.20 Y 65 14 "O3'" A U 76 ? ? P A G 77 ? ? OP2 A G 77 ? ? 64.02 105.20 -41.18 2.20 Y 66 14 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 58.95 105.20 -46.25 2.20 Y 67 14 "O3'" A C 105 ? ? P A G 106 ? ? OP2 A G 106 ? ? 128.52 110.50 18.02 1.10 Y 68 14 "O3'" A C 105 ? ? P A G 106 ? ? OP1 A G 106 ? ? 12.41 105.20 -92.79 2.20 Y 69 14 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 122.66 110.50 12.16 1.10 Y 70 14 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 4.59 105.20 -100.61 2.20 Y 71 15 "O3'" A G 9 ? ? P A U 10 ? ? OP1 A U 10 ? ? 29.23 105.20 -75.97 2.20 Y 72 15 "O3'" A U 12 ? ? P A C 13 ? ? OP2 A C 13 ? ? 50.08 105.20 -55.12 2.20 Y 73 15 "O3'" A U 12 ? ? P A C 13 ? ? OP1 A C 13 ? ? 142.74 110.50 32.24 1.10 Y 74 15 "O3'" A A 34 ? ? P A U 35 ? ? OP2 A U 35 ? ? 20.09 105.20 -85.11 2.20 Y 75 15 "O3'" A U 47 ? ? P A C 48 ? ? OP2 A C 48 ? ? 66.86 105.20 -38.34 2.20 Y 76 15 "O3'" A U 47 ? ? P A C 48 ? ? OP1 A C 48 ? ? 56.33 105.20 -48.87 2.20 Y 77 15 "O3'" A U 63 ? ? P A C 64 ? ? OP2 A C 64 ? ? 85.45 105.20 -19.75 2.20 Y 78 15 "O3'" A U 63 ? ? P A C 64 ? ? OP1 A C 64 ? ? 124.42 110.50 13.92 1.10 Y 79 15 "O3'" A U 76 ? ? P A G 77 ? ? OP2 A G 77 ? ? 91.59 105.20 -13.61 2.20 Y 80 15 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 119.29 110.50 8.79 1.10 Y 81 15 "O3'" A U 85 ? ? P A G 86 ? ? OP1 A G 86 ? ? 8.88 105.20 -96.32 2.20 Y 82 15 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 84.15 105.20 -21.05 2.20 Y 83 15 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 125.52 110.50 15.02 1.10 Y 84 16 "O3'" A U 12 ? ? P A C 13 ? ? OP2 A C 13 ? ? 142.47 110.50 31.97 1.10 Y 85 16 "O3'" A U 12 ? ? P A C 13 ? ? OP1 A C 13 ? ? 51.46 105.20 -53.74 2.20 Y 86 16 "O3'" A C 54 ? ? P A G 55 ? ? OP2 A G 55 ? ? 142.59 110.50 32.09 1.10 Y 87 16 "O3'" A C 54 ? ? P A G 55 ? ? OP1 A G 55 ? ? 51.47 105.20 -53.73 2.20 Y 88 16 "C1'" A U 62 ? ? "O4'" A U 62 ? ? "C4'" A U 62 ? ? 114.79 109.90 4.89 0.80 N 89 16 "O3'" A G 65 ? ? P A G 66 ? ? OP1 A G 66 ? ? 118.68 110.50 8.18 1.10 Y 90 16 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 117.67 110.50 7.17 1.10 Y 91 16 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 90.57 105.20 -14.63 2.20 Y 92 16 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 120.22 110.50 9.72 1.10 Y 93 18 "O3'" A A 6 ? ? P A U 7 ? ? OP1 A U 7 ? ? 117.69 110.50 7.19 1.10 Y 94 18 "O3'" A A 17 ? ? P A G 18 ? ? OP2 A G 18 ? ? 6.13 105.20 -99.07 2.20 Y 95 18 "O3'" A U 47 ? ? P A C 48 ? ? OP2 A C 48 ? ? 142.56 110.50 32.06 1.10 Y 96 18 "O3'" A U 47 ? ? P A C 48 ? ? OP1 A C 48 ? ? 51.48 105.20 -53.72 2.20 Y 97 18 "O3'" A G 50 ? ? P A G 51 ? ? OP1 A G 51 ? ? 118.66 110.50 8.16 1.10 Y 98 18 "O3'" A U 85 ? ? P A G 86 ? ? OP2 A G 86 ? ? 11.29 105.20 -93.91 2.20 Y 99 18 "O3'" A U 85 ? ? P A G 86 ? ? OP1 A G 86 ? ? 127.83 110.50 17.33 1.10 Y 100 18 "O3'" A C 105 ? ? P A G 106 ? ? OP2 A G 106 ? ? 7.25 105.20 -97.95 2.20 Y 101 20 "O3'" A A 6 ? ? P A U 7 ? ? OP2 A U 7 ? ? 13.12 105.20 -92.08 2.20 Y 102 20 "O3'" A A 17 ? ? P A G 18 ? ? OP2 A G 18 ? ? 4.56 105.20 -100.64 2.20 Y 103 20 "O4'" A A 33 ? ? "C1'" A A 33 ? ? N9 A A 33 ? ? 112.78 108.50 4.28 0.70 N 104 20 "O3'" A A 34 ? ? P A U 35 ? ? OP2 A U 35 ? ? 7.84 105.20 -97.36 2.20 Y 105 20 "O3'" A A 34 ? ? P A U 35 ? ? OP1 A U 35 ? ? 125.22 110.50 14.72 1.10 Y 106 20 "O3'" A U 63 ? ? P A C 64 ? ? OP2 A C 64 ? ? 74.23 105.20 -30.97 2.20 Y 107 20 "O3'" A U 63 ? ? P A C 64 ? ? OP1 A C 64 ? ? 132.84 110.50 22.34 1.10 Y 108 20 "O3'" A G 65 ? ? P A G 66 ? ? OP2 A G 66 ? ? 91.52 105.20 -13.68 2.20 Y 109 20 "O3'" A G 65 ? ? P A G 66 ? ? OP1 A G 66 ? ? 30.84 105.20 -74.36 2.20 Y 110 20 "C3'" A C 105 ? ? "O3'" A C 105 ? ? P A G 106 ? ? 128.76 119.70 9.06 1.20 Y 111 20 "O3'" A G 123 ? ? P A C 124 ? ? OP2 A C 124 ? ? 87.77 105.20 -17.43 2.20 Y 112 20 "O3'" A G 123 ? ? P A C 124 ? ? OP1 A C 124 ? ? 121.52 110.50 11.02 1.10 Y 113 21 "O3'" A U 12 ? ? P A C 13 ? ? OP1 A C 13 ? ? 118.39 110.50 7.89 1.10 Y 114 21 "O3'" A A 34 ? ? P A U 35 ? ? OP1 A U 35 ? ? 16.05 105.20 -89.15 2.20 Y 115 21 "O3'" A U 47 ? ? P A C 48 ? ? OP2 A C 48 ? ? 118.65 110.50 8.15 1.10 Y 116 21 "C3'" A U 76 ? ? "O3'" A U 76 ? ? P A G 77 ? ? 129.41 119.70 9.71 1.20 Y 117 21 "O3'" A U 76 ? ? P A G 77 ? ? OP2 A G 77 ? ? 87.70 105.20 -17.50 2.20 Y 118 21 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 37.42 105.20 -67.78 2.20 Y 119 21 "O4'" A A 100 ? ? "C4'" A A 100 ? ? "C3'" A A 100 ? ? 90.30 104.00 -13.70 1.00 N 120 21 "C5'" A A 100 ? ? "C4'" A A 100 ? ? "O4'" A A 100 ? ? 100.93 109.10 -8.17 1.20 N 121 21 "C3'" A A 100 ? ? "C2'" A A 100 ? ? "C1'" A A 100 ? ? 96.82 101.30 -4.48 0.70 N 122 22 "C5'" A A 6 ? ? "C4'" A A 6 ? ? "O4'" A A 6 ? ? 123.20 109.80 13.40 0.90 N 123 22 "O3'" A G 9 ? ? P A U 10 ? ? OP2 A U 10 ? ? 15.30 105.20 -89.90 2.20 Y 124 22 "O3'" A A 17 ? ? P A G 18 ? ? OP2 A G 18 ? ? 78.50 105.20 -26.70 2.20 Y 125 22 "O3'" A A 17 ? ? P A G 18 ? ? OP1 A G 18 ? ? 129.79 110.50 19.29 1.10 Y 126 22 "O3'" A A 34 ? ? P A U 35 ? ? OP2 A U 35 ? ? 26.52 105.20 -78.68 2.20 Y 127 22 "O3'" A U 47 ? ? P A C 48 ? ? OP2 A C 48 ? ? 79.10 105.20 -26.10 2.20 Y 128 22 "O3'" A U 47 ? ? P A C 48 ? ? OP1 A C 48 ? ? 43.75 105.20 -61.45 2.20 Y 129 22 "O3'" A U 63 ? ? P A C 64 ? ? OP1 A C 64 ? ? 9.21 105.20 -95.99 2.20 Y 130 22 "O3'" A G 65 ? ? P A G 66 ? ? OP2 A G 66 ? ? 90.38 105.20 -14.82 2.20 Y 131 22 "O3'" A G 65 ? ? P A G 66 ? ? OP1 A G 66 ? ? 120.35 110.50 9.85 1.10 Y 132 22 "O3'" A U 85 ? ? P A G 86 ? ? OP1 A G 86 ? ? 118.42 110.50 7.92 1.10 Y 133 22 "O3'" A C 105 ? ? P A G 106 ? ? OP2 A G 106 ? ? 24.24 105.20 -80.96 2.20 Y 134 22 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 90.11 105.20 -15.09 2.20 Y 135 22 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 120.73 110.50 10.23 1.10 Y 136 23 "O3'" A A 6 ? ? P A U 7 ? ? OP1 A U 7 ? ? 117.27 110.50 6.77 1.10 Y 137 23 "O3'" A A 17 ? ? P A G 18 ? ? OP2 A G 18 ? ? 125.06 110.50 14.56 1.10 Y 138 23 "O3'" A A 17 ? ? P A G 18 ? ? OP1 A G 18 ? ? 7.73 105.20 -97.47 2.20 Y 139 23 "C3'" A C 54 ? ? "C2'" A C 54 ? ? "C1'" A C 54 ? ? 96.75 101.30 -4.55 0.70 N 140 23 "O3'" A U 63 ? ? P A C 64 ? ? OP1 A C 64 ? ? 118.78 110.50 8.28 1.10 Y 141 23 "O3'" A U 76 ? ? P A G 77 ? ? OP2 A G 77 ? ? 119.65 110.50 9.15 1.10 Y 142 23 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 91.20 105.20 -14.00 2.20 Y 143 23 "O3'" A U 85 ? ? P A G 86 ? ? OP2 A G 86 ? ? 26.04 105.20 -79.16 2.20 Y 144 23 "O3'" A U 85 ? ? P A G 86 ? ? OP1 A G 86 ? ? 137.19 110.50 26.69 1.10 Y 145 23 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 4.56 105.20 -100.64 2.20 Y 146 25 "O3'" A G 9 ? ? P A U 10 ? ? OP2 A U 10 ? ? 87.05 105.20 -18.15 2.20 Y 147 25 "O3'" A G 9 ? ? P A U 10 ? ? OP1 A U 10 ? ? 35.63 105.20 -69.57 2.20 Y 148 25 "O3'" A A 34 ? ? P A U 35 ? ? OP2 A U 35 ? ? 89.69 105.20 -15.51 2.20 Y 149 25 "O3'" A A 34 ? ? P A U 35 ? ? OP1 A U 35 ? ? 32.69 105.20 -72.51 2.20 Y 150 25 "O3'" A C 54 ? ? P A G 55 ? ? OP2 A G 55 ? ? 142.57 110.50 32.07 1.10 Y 151 25 "O3'" A C 54 ? ? P A G 55 ? ? OP1 A G 55 ? ? 51.44 105.20 -53.76 2.20 Y 152 25 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 121.59 110.50 11.09 1.10 Y 153 25 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 88.92 105.20 -16.28 2.20 Y 154 27 "O3'" A A 6 ? ? P A U 7 ? ? OP2 A U 7 ? ? 83.67 105.20 -21.53 2.20 Y 155 27 "O3'" A A 6 ? ? P A U 7 ? ? OP1 A U 7 ? ? 39.15 105.20 -66.05 2.20 Y 156 27 "O3'" A A 17 ? ? P A G 18 ? ? OP2 A G 18 ? ? 117.87 110.50 7.37 1.10 Y 157 27 "O3'" A U 47 ? ? P A C 48 ? ? OP2 A C 48 ? ? 88.22 105.20 -16.98 2.20 Y 158 27 "O3'" A U 47 ? ? P A C 48 ? ? OP1 A C 48 ? ? 122.22 110.50 11.72 1.10 Y 159 27 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 15.77 105.20 -89.43 2.20 Y 160 27 "O3'" A A 115 ? ? P A G 116 ? ? OP2 A G 116 ? ? 78.46 105.20 -26.74 2.20 Y 161 27 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 129.81 110.50 19.31 1.10 Y 162 28 "C2'" A A 6 ? ? "C3'" A A 6 ? ? "O3'" A A 6 ? ? 135.02 113.70 21.32 1.60 N 163 28 "O3'" A A 6 ? ? P A U 7 ? ? OP2 A U 7 ? ? 24.32 105.20 -80.88 2.20 Y 164 28 "O3'" A A 6 ? ? P A U 7 ? ? OP1 A U 7 ? ? 136.26 110.50 25.76 1.10 Y 165 28 "O3'" A G 9 ? ? P A U 10 ? ? OP2 A U 10 ? ? 37.84 105.20 -67.36 2.20 Y 166 28 "O3'" A G 9 ? ? P A U 10 ? ? OP1 A U 10 ? ? 141.84 110.50 31.34 1.10 Y 167 28 "O3'" A G 65 ? ? P A G 66 ? ? OP2 A G 66 ? ? 13.21 105.20 -91.99 2.20 Y 168 28 "O3'" A A 115 ? ? P A G 116 ? ? OP1 A G 116 ? ? 117.23 110.50 6.73 1.10 Y 169 29 "O3'" A A 6 ? ? P A U 7 ? ? OP2 A U 7 ? ? 87.13 105.20 -18.07 2.20 Y 170 29 "O3'" A A 6 ? ? P A U 7 ? ? OP1 A U 7 ? ? 123.01 110.50 12.51 1.10 Y 171 29 "O3'" A G 9 ? ? P A U 10 ? ? OP2 A U 10 ? ? 28.66 105.20 -76.54 2.20 Y 172 29 "O3'" A G 9 ? ? P A U 10 ? ? OP1 A U 10 ? ? 138.48 110.50 27.98 1.10 Y 173 29 "O3'" A A 17 ? ? P A G 18 ? ? OP2 A G 18 ? ? 133.73 110.50 23.23 1.10 Y 174 29 "O3'" A A 17 ? ? P A G 18 ? ? OP1 A G 18 ? ? 72.76 105.20 -32.44 2.20 Y 175 29 "O3'" A A 34 ? ? P A U 35 ? ? OP2 A U 35 ? ? 2.24 105.20 -102.96 2.20 Y 176 29 "O3'" A A 34 ? ? P A U 35 ? ? OP1 A U 35 ? ? 117.43 110.50 6.93 1.10 Y 177 29 "O3'" A G 65 ? ? P A G 66 ? ? OP2 A G 66 ? ? 90.99 105.20 -14.21 2.20 Y 178 29 "O3'" A G 65 ? ? P A G 66 ? ? OP1 A G 66 ? ? 119.82 110.50 9.32 1.10 Y 179 29 "O3'" A U 85 ? ? P A G 86 ? ? OP2 A G 86 ? ? 18.48 105.20 -86.72 2.20 Y 180 30 "O3'" A U 12 ? ? P A C 13 ? ? OP1 A C 13 ? ? 23.29 105.20 -81.91 2.20 Y 181 30 "O3'" A A 17 ? ? P A G 18 ? ? OP2 A G 18 ? ? 87.17 105.20 -18.03 2.20 Y 182 30 "O3'" A A 17 ? ? P A G 18 ? ? OP1 A G 18 ? ? 35.44 105.20 -69.76 2.20 Y 183 30 "O3'" A A 36 ? ? P A U 37 ? ? OP2 A U 37 ? ? 17.62 105.20 -87.58 2.20 Y 184 30 "O3'" A G 50 ? ? P A G 51 ? ? OP1 A G 51 ? ? 117.20 110.50 6.70 1.10 Y 185 30 "O3'" A G 66 ? ? P A U 67 ? ? OP2 A U 67 ? ? 84.85 105.20 -20.35 2.20 Y 186 30 "O3'" A G 66 ? ? P A U 67 ? ? OP1 A U 67 ? ? 124.85 110.50 14.35 1.10 Y 187 30 "O3'" A U 76 ? ? P A G 77 ? ? OP2 A G 77 ? ? 128.01 110.50 17.51 1.10 Y 188 30 "O3'" A U 76 ? ? P A G 77 ? ? OP1 A G 77 ? ? 11.65 105.20 -93.55 2.20 Y # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9YXA _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9YXA _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 9.5 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 21246 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source SYNTHETIC _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'BtCoV SL5 with SL5c truncated' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9YXA _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_defocus_max 2600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9YXA _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9YXA _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # _em_admin.current_status REL _em_admin.deposition_date 2025-10-26 _em_admin.deposition_site RCSB _em_admin.entry_id 9YXA _em_admin.last_update 2026-08-26 _em_admin.map_release_date 2026-08-26 _em_admin.title 'BtCoV SL5 with SL5c truncated' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 694008 _em_entity_assembly_naturalsource.organism 'Pipistrellus bat coronavirus HKU5' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9YXA 'double helix' 9YXA 'a-form double helix' 9YXA 'hairpin loop' 9YXA 'bulge loop' 9YXA 'mismatched base pair' 9YXA 'internal loop' 9YXA 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 127 1_555 -0.138 -0.136 -0.118 -4.724 -4.909 -1.051 1 A_G1:C127_A A 1 ? A 127 ? 19 1 1 A G 2 1_555 A C 126 1_555 -0.118 -0.126 -0.143 -6.743 -4.726 -1.534 2 A_G2:C126_A A 2 ? A 126 ? 19 1 1 A A 3 1_555 A U 125 1_555 0.025 -0.073 -0.127 -4.526 -2.656 -3.774 3 A_A3:U125_A A 3 ? A 125 ? 20 1 1 A G 4 1_555 A C 124 1_555 -0.106 -0.120 -0.100 -4.674 -4.318 -1.702 4 A_G4:C124_A A 4 ? A 124 ? 19 1 1 A C 5 1_555 A G 123 1_555 0.165 -0.126 -0.050 1.023 -2.891 -1.103 5 A_C5:G123_A A 5 ? A 123 ? 19 1 1 A U 7 1_555 A A 122 1_555 0.060 -0.117 -0.166 -1.048 -7.241 -1.013 6 A_U7:A122_A A 7 ? A 122 ? 20 1 1 A C 8 1_555 A G 121 1_555 0.169 -0.137 -0.009 -2.758 -0.174 -0.802 7 A_C8:G121_A A 8 ? A 121 ? 19 1 1 A U 10 1_555 A A 120 1_555 0.132 -0.070 -0.092 -16.869 -12.052 -0.614 8 A_U10:A120_A A 10 ? A 120 ? 20 1 1 A G 11 1_555 A C 119 1_555 -0.137 -0.136 -0.112 -4.992 -5.567 -1.079 9 A_G11:C119_A A 11 ? A 119 ? 19 1 1 A C 13 1_555 A G 118 1_555 0.152 -0.139 -0.084 2.271 -3.722 -0.659 10 A_C13:G118_A A 13 ? A 118 ? 19 1 1 A U 14 1_555 A A 117 1_555 0.074 -0.104 -0.164 -2.572 -5.994 -2.047 11 A_U14:A117_A A 14 ? A 117 ? 20 1 1 A C 15 1_555 A G 116 1_555 0.162 -0.130 0.018 -2.901 -0.726 -1.284 12 A_C15:G116_A A 15 ? A 116 ? 19 1 1 A G 18 1_555 A U 114 1_555 -2.107 -0.486 -0.011 -1.886 -11.478 -1.643 13 A_G18:U114_A A 18 ? A 114 ? 28 1 1 A U 19 1_555 A A 113 1_555 0.099 -0.115 -0.140 -2.116 -8.863 -1.344 14 A_U19:A113_A A 19 ? A 113 ? 20 1 1 A G 20 1_555 A U 112 1_555 -2.050 -0.470 0.015 -3.167 -5.685 -4.307 15 A_G20:U112_A A 20 ? A 112 ? 28 1 1 A C 21 1_555 A G 111 1_555 0.149 -0.112 -0.050 2.595 -3.148 -1.705 16 A_C21:G111_A A 21 ? A 111 ? 19 1 1 A U 22 1_555 A A 110 1_555 0.063 -0.094 -0.159 0.032 -4.401 -2.315 17 A_U22:A110_A A 22 ? A 110 ? 20 1 1 A U 23 1_555 A A 109 1_555 0.071 -0.101 -0.114 -2.226 -5.419 -2.096 18 A_U23:A109_A A 23 ? A 109 ? 20 1 1 A G 96 1_555 A C 108 1_555 -0.135 -0.137 -0.111 -4.856 -5.522 -1.092 19 A_G96:C108_A A 96 ? A 108 ? 19 1 1 A U 97 1_555 A A 107 1_555 0.076 -0.104 -0.122 -4.029 -7.717 -1.884 20 A_U97:A107_A A 97 ? A 107 ? 20 1 1 A C 98 1_555 A G 106 1_555 0.164 -0.128 0.015 -2.270 -0.914 -1.218 21 A_C98:G106_A A 98 ? A 106 ? 19 1 1 A A 99 1_555 A U 103 1_555 -0.265 0.357 0.589 45.009 18.977 -20.567 22 A_A99:U103_A A 99 ? A 103 ? 20 1 1 A C 45 1_555 A U 42 1_555 -6.482 -4.921 0.360 -38.682 5.953 -38.682 23 A_C45:U42_A A 45 ? A 42 ? ? 4 1 A C 48 1_555 A G 41 1_555 0.105 -0.125 -0.168 7.021 -4.761 -1.761 24 A_C48:G41_A A 48 ? A 41 ? 19 1 1 A G 49 1_555 A C 40 1_555 -0.148 -0.141 -0.078 -2.291 -3.586 -0.671 25 A_G49:C40_A A 49 ? A 40 ? 19 1 1 A G 51 1_555 A C 39 1_555 -0.171 -0.125 -0.021 1.459 -1.225 -1.192 26 A_G51:C39_A A 51 ? A 39 ? 19 1 1 A U 52 1_555 A A 38 1_555 0.021 -0.108 -0.226 8.315 -2.830 -1.490 27 A_U52:A38_A A 52 ? A 38 ? 20 1 1 A G 53 1_555 A U 37 1_555 -2.122 -0.476 -0.041 -0.055 -3.313 -1.648 28 A_G53:U37_A A 53 ? A 37 ? 28 1 1 A C 54 1_555 A A 33 1_555 -2.386 0.372 -1.153 7.976 2.333 -35.022 29 A_C54:A33_A A 54 ? A 33 ? ? ? 1 A G 55 1_555 A C 32 1_555 -0.161 -0.123 -0.041 -0.680 -2.491 -1.306 30 A_G55:C32_A A 55 ? A 32 ? 19 1 1 A U 56 1_555 A A 31 1_555 -0.060 -0.050 -0.115 3.326 -2.032 -4.771 31 A_U56:A31_A A 56 ? A 31 ? 20 1 1 A G 57 1_555 A C 30 1_555 -0.157 -0.152 -0.003 3.930 -0.310 -0.465 32 A_G57:C30_A A 57 ? A 30 ? 19 1 1 A G 58 1_555 A U 29 1_555 -2.123 -0.458 -0.009 3.931 -2.489 -1.977 33 A_G58:U29_A A 58 ? A 29 ? 28 1 1 A C 59 1_555 A G 28 1_555 0.134 -0.126 -0.108 5.217 -5.424 -1.489 34 A_C59:G28_A A 59 ? A 28 ? 19 1 1 A C 64 1_555 A G 27 1_555 0.106 -0.126 -0.167 7.019 -4.782 -1.762 35 A_C64:G27_A A 64 ? A 27 ? 19 1 1 A G 65 1_555 A C 26 1_555 -0.148 -0.140 -0.077 -2.303 -3.583 -0.662 36 A_G65:C26_A A 65 ? A 26 ? 19 1 1 A U 67 1_555 A A 25 1_555 -0.021 -0.086 -0.159 4.555 -3.188 -2.885 37 A_U67:A25_A A 67 ? A 25 ? 20 1 1 A G 68 1_555 A C 24 1_555 -0.145 -0.140 -0.077 -2.382 -3.510 -0.645 38 A_G68:C24_A A 68 ? A 24 ? 19 1 1 A C 69 1_555 A G 95 1_555 0.146 -0.139 -0.078 2.400 -3.514 -0.637 39 A_C69:G95_A A 69 ? A 95 ? 19 1 1 A A 70 1_555 A U 94 1_555 0.022 -0.085 -0.160 -4.557 -3.181 -2.869 40 A_A70:U94_A A 70 ? A 94 ? 20 1 1 A C 71 1_555 A G 93 1_555 0.157 -0.129 -0.023 -0.775 -1.489 -0.967 41 A_C71:G93_A A 71 ? A 93 ? 19 1 1 A A 72 1_555 A U 92 1_555 0.038 -0.052 -0.117 -3.888 -2.899 -4.380 42 A_A72:U92_A A 72 ? A 92 ? 20 1 1 A U 73 1_555 A G 91 1_555 2.123 -0.457 -0.010 -2.242 -1.560 -2.725 43 A_U73:G91_A A 73 ? A 91 ? 28 1 1 A C 74 1_555 A G 90 1_555 0.158 -0.154 -0.029 -2.409 -0.806 -0.410 44 A_C74:G90_A A 74 ? A 90 ? 19 1 1 A A 75 1_555 A U 89 1_555 0.051 -0.058 -0.123 -3.354 -2.208 -4.422 45 A_A75:U89_A A 75 ? A 89 ? 20 1 1 A G 77 1_555 A C 88 1_555 -0.134 -0.126 -0.108 -5.216 -5.418 -1.492 46 A_G77:C88_A A 77 ? A 88 ? 19 1 1 A U 78 1_555 A G 87 1_555 2.122 -0.458 -0.010 -3.923 -2.483 -1.980 47 A_U78:G87_A A 78 ? A 87 ? 28 1 1 A C 79 1_555 A G 86 1_555 0.174 -0.155 -0.011 -3.477 -0.981 -0.459 48 A_C79:G86_A A 79 ? A 86 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 127 1_555 A G 2 1_555 A C 126 1_555 -0.019 -1.789 3.287 0.111 6.677 32.578 -4.191 0.050 2.874 11.749 -0.195 33.237 1 AA_G1G2:C126C127_AA A 1 ? A 127 ? A 2 ? A 126 ? 1 A G 2 1_555 A C 126 1_555 A A 3 1_555 A U 125 1_555 -0.031 -1.636 3.191 -0.301 7.319 32.605 -3.965 0.008 2.769 12.835 0.527 33.396 2 AA_G2A3:U125C126_AA A 2 ? A 126 ? A 3 ? A 125 ? 1 A A 3 1_555 A U 125 1_555 A G 4 1_555 A C 124 1_555 0.314 -1.700 3.315 -0.155 7.024 31.030 -4.334 -0.600 2.869 12.922 0.286 31.796 3 AA_A3G4:C124U125_AA A 3 ? A 125 ? A 4 ? A 124 ? 1 A G 4 1_555 A C 124 1_555 A C 5 1_555 A G 123 1_555 0.235 -1.644 3.102 0.052 5.072 33.243 -3.598 -0.398 2.828 8.802 -0.091 33.617 4 AA_G4C5:G123C124_AA A 4 ? A 124 ? A 5 ? A 123 ? 1 A C 5 1_555 A G 123 1_555 A U 7 1_555 A A 122 1_555 -1.446 -1.429 3.382 11.589 26.411 55.869 -2.494 1.885 2.258 26.339 -11.557 62.337 5 AA_C5U7:A122G123_AA A 5 ? A 123 ? A 7 ? A 122 ? 1 A U 7 1_555 A A 122 1_555 A C 8 1_555 A G 121 1_555 0.029 -1.807 3.276 -0.112 7.218 33.146 -4.194 -0.066 2.831 12.468 0.193 33.901 6 AA_U7C8:G121A122_AA A 7 ? A 122 ? A 8 ? A 121 ? 1 A C 8 1_555 A G 121 1_555 A U 10 1_555 A A 120 1_555 -1.443 -1.502 5.472 21.475 20.502 56.446 -2.853 2.864 4.041 20.211 -21.171 63.205 7 AA_C8U10:A120G121_AA A 8 ? A 121 ? A 10 ? A 120 ? 1 A U 10 1_555 A A 120 1_555 A G 11 1_555 A C 119 1_555 0.498 -0.614 2.973 -3.115 17.738 28.622 -3.525 -1.292 2.173 32.171 5.650 33.716 8 AA_U10G11:C119A120_AA A 10 ? A 120 ? A 11 ? A 119 ? 1 A G 11 1_555 A C 119 1_555 A C 13 1_555 A G 118 1_555 -1.943 -0.960 2.875 -2.643 16.465 49.780 -2.016 2.054 2.553 18.957 3.043 52.329 9 AA_G11C13:G118C119_AA A 11 ? A 119 ? A 13 ? A 118 ? 1 A C 13 1_555 A G 118 1_555 A U 14 1_555 A A 117 1_555 0.095 -1.902 3.345 1.911 6.380 31.617 -4.514 0.157 2.916 11.549 -3.460 32.294 10 AA_C13U14:A117G118_AA A 13 ? A 118 ? A 14 ? A 117 ? 1 A U 14 1_555 A A 117 1_555 A C 15 1_555 A G 116 1_555 0.196 -1.738 3.275 -0.078 6.523 32.769 -4.052 -0.353 2.885 11.421 0.137 33.394 11 AA_U14C15:G116A117_AA A 14 ? A 117 ? A 15 ? A 116 ? 1 A C 15 1_555 A G 116 1_555 A G 18 1_555 A U 114 1_555 -1.562 -4.236 5.804 9.141 30.124 79.288 -4.282 1.506 4.114 22.807 -6.920 84.342 12 AA_C15G18:U114G116_AA A 15 ? A 116 ? A 18 ? A 114 ? 1 A G 18 1_555 A U 114 1_555 A U 19 1_555 A A 113 1_555 -0.075 -1.417 3.176 -0.546 5.772 40.447 -2.628 0.051 2.956 8.297 0.785 40.843 13 AA_G18U19:A113U114_AA A 18 ? A 114 ? A 19 ? A 113 ? 1 A U 19 1_555 A A 113 1_555 A G 20 1_555 A U 112 1_555 -0.122 -1.800 3.161 -3.812 10.229 26.007 -5.777 -0.524 2.297 21.561 8.035 28.168 14 AA_U19G20:U112A113_AA A 19 ? A 113 ? A 20 ? A 112 ? 1 A G 20 1_555 A U 112 1_555 A C 21 1_555 A G 111 1_555 0.252 -1.326 3.132 -1.360 6.698 40.023 -2.601 -0.503 2.873 9.701 1.970 40.579 15 AA_G20C21:G111U112_AA A 20 ? A 112 ? A 21 ? A 111 ? 1 A C 21 1_555 A G 111 1_555 A U 22 1_555 A A 110 1_555 0.202 -1.793 3.361 1.191 7.852 31.209 -4.586 -0.160 2.843 14.306 -2.170 32.180 16 AA_C21U22:A110G111_AA A 21 ? A 111 ? A 22 ? A 110 ? 1 A U 22 1_555 A A 110 1_555 A U 23 1_555 A A 109 1_555 0.238 -1.750 3.344 0.971 7.089 31.998 -4.282 -0.260 2.906 12.662 -1.735 32.768 17 AA_U22U23:A109A110_AA A 22 ? A 110 ? A 23 ? A 109 ? 1 A U 23 1_555 A A 109 1_555 A G 96 1_555 A C 108 1_555 -0.372 -1.643 3.090 2.994 19.915 40.452 -3.649 0.712 2.072 26.885 -4.042 44.999 18 AA_U23G96:C108A109_AA A 23 ? A 109 ? A 96 ? A 108 ? 1 A G 96 1_555 A C 108 1_555 A U 97 1_555 A A 107 1_555 0.081 -1.754 3.213 0.974 4.659 33.503 -3.726 0.009 2.951 8.031 -1.679 33.829 19 AA_G96U97:A107C108_AA A 96 ? A 108 ? A 97 ? A 107 ? 1 A U 97 1_555 A A 107 1_555 A C 98 1_555 A G 106 1_555 0.204 -1.674 3.195 -0.253 6.730 32.558 -3.971 -0.396 2.800 11.846 0.446 33.229 20 AA_U97C98:G106A107_AA A 97 ? A 107 ? A 98 ? A 106 ? 1 A C 98 1_555 A G 106 1_555 A A 99 1_555 A U 103 1_555 2.238 -2.050 2.465 -14.975 -8.368 51.930 -1.876 -3.092 2.077 -9.273 16.594 54.502 21 AA_C98A99:U103G106_AA A 98 ? A 106 ? A 99 ? A 103 ? 1 A C 45 1_555 A U 42 1_555 A C 48 1_555 A G 41 1_555 -0.792 -1.482 2.067 1.047 10.690 80.726 -1.303 0.624 1.885 8.220 -0.805 81.316 22 AA_C45C48:G41U42_AA A 45 ? A 42 ? A 48 ? A 41 ? 1 A C 48 1_555 A G 41 1_555 A G 49 1_555 A C 40 1_555 0.024 -1.897 3.491 -1.227 8.493 30.895 -4.956 -0.262 2.878 15.569 2.250 32.037 23 AA_C48G49:C40G41_AA A 48 ? A 41 ? A 49 ? A 40 ? 1 A G 49 1_555 A C 40 1_555 A G 51 1_555 A C 39 1_555 -2.665 -1.977 4.778 16.936 16.680 50.527 -3.356 4.113 3.065 18.420 -18.703 55.506 24 AA_G49G51:C39C40_AA A 49 ? A 40 ? A 51 ? A 39 ? 1 A G 51 1_555 A C 39 1_555 A U 52 1_555 A A 38 1_555 -0.244 -1.651 3.103 0.094 4.868 31.922 -3.758 0.454 2.826 8.787 -0.169 32.282 25 AA_G51U52:A38C39_AA A 51 ? A 39 ? A 52 ? A 38 ? 1 A U 52 1_555 A A 38 1_555 A G 53 1_555 A U 37 1_555 -0.032 -2.155 3.417 -5.043 9.105 25.599 -6.596 -1.085 2.480 19.549 10.828 27.602 26 AA_U52G53:U37A38_AA A 52 ? A 38 ? A 53 ? A 37 ? 1 A G 53 1_555 A U 37 1_555 A C 54 1_555 A A 33 1_555 2.026 -0.461 3.359 1.250 8.095 68.219 -0.717 -1.749 3.325 7.191 -1.110 68.650 27 AA_G53C54:A33U37_AA A 53 ? A 37 ? A 54 ? A 33 ? 1 A C 54 1_555 A A 33 1_555 A G 55 1_555 A C 32 1_555 1.895 -1.251 3.648 -13.619 30.768 45.453 -3.021 -2.765 1.915 34.793 15.400 56.016 28 AA_C54G55:C32A33_AA A 54 ? A 33 ? A 55 ? A 32 ? 1 A G 55 1_555 A C 32 1_555 A U 56 1_555 A A 31 1_555 -0.508 -1.650 3.227 -0.149 6.019 32.552 -3.854 0.868 2.887 10.624 0.264 33.090 29 AA_G55U56:A31C32_AA A 55 ? A 32 ? A 56 ? A 31 ? 1 A U 56 1_555 A A 31 1_555 A G 57 1_555 A C 30 1_555 0.051 -1.656 3.244 -1.733 8.572 30.062 -4.568 -0.396 2.675 16.103 3.255 31.280 30 AA_U56G57:C30A31_AA A 56 ? A 31 ? A 57 ? A 30 ? 1 A G 57 1_555 A C 30 1_555 A G 58 1_555 A U 29 1_555 -0.230 -2.082 3.118 -4.387 7.509 26.095 -5.994 -0.456 2.441 16.072 9.389 27.482 31 AA_G57G58:U29C30_AA A 57 ? A 30 ? A 58 ? A 29 ? 1 A G 58 1_555 A U 29 1_555 A C 59 1_555 A G 28 1_555 -0.152 -1.559 3.260 -0.986 4.793 40.622 -2.741 0.113 3.067 6.874 1.414 40.904 32 AA_G58C59:G28U29_AA A 58 ? A 29 ? A 59 ? A 28 ? 1 A C 59 1_555 A G 28 1_555 A C 64 1_555 A G 27 1_555 -4.738 -0.174 3.760 12.869 30.504 80.941 -0.859 3.771 2.932 22.671 -9.564 86.359 33 AA_C59C64:G27G28_AA A 59 ? A 28 ? A 64 ? A 27 ? 1 A C 64 1_555 A G 27 1_555 A G 65 1_555 A C 26 1_555 0.023 -1.897 3.491 -1.220 8.485 30.889 -4.957 -0.261 2.879 15.559 2.238 32.028 34 AA_C64G65:C26G27_AA A 64 ? A 27 ? A 65 ? A 26 ? 1 A G 65 1_555 A C 26 1_555 A U 67 1_555 A A 25 1_555 -2.343 -1.411 3.179 0.484 -3.532 48.047 -1.457 2.907 3.246 -4.331 -0.593 48.171 35 AA_G65U67:A25C26_AA A 65 ? A 26 ? A 67 ? A 25 ? 1 A U 67 1_555 A A 25 1_555 A G 68 1_555 A C 24 1_555 0.117 -1.869 3.423 -1.138 8.246 31.356 -4.764 -0.404 2.847 14.930 2.060 32.416 36 AA_U67G68:C24A25_AA A 67 ? A 25 ? A 68 ? A 24 ? 1 A G 68 1_555 A C 24 1_555 A C 69 1_555 A G 95 1_555 -0.448 -2.193 3.898 -20.448 21.392 37.784 -4.573 -1.222 2.361 28.342 27.091 47.658 37 AA_G68C69:G95C24_AA A 68 ? A 24 ? A 69 ? A 95 ? 1 A C 69 1_555 A G 95 1_555 A A 70 1_555 A U 94 1_555 -0.117 -1.869 3.424 1.137 8.266 31.351 -4.767 0.405 2.846 14.968 -2.058 32.415 38 AA_C69A70:U94G95_AA A 69 ? A 95 ? A 70 ? A 94 ? 1 A A 70 1_555 A U 94 1_555 A C 71 1_555 A G 93 1_555 0.295 -1.713 3.203 0.040 5.616 32.911 -3.855 -0.508 2.880 9.824 -0.069 33.374 39 AA_A70C71:G93U94_AA A 70 ? A 94 ? A 71 ? A 93 ? 1 A C 71 1_555 A G 93 1_555 A A 72 1_555 A U 92 1_555 -0.036 -1.756 3.374 1.260 8.511 31.027 -4.633 0.282 2.803 15.539 -2.301 32.170 40 AA_C71A72:U92G93_AA A 71 ? A 93 ? A 72 ? A 92 ? 1 A A 72 1_555 A U 92 1_555 A U 73 1_555 A G 91 1_555 0.391 -1.523 3.326 1.046 6.138 39.323 -2.938 -0.456 3.073 9.052 -1.542 39.793 41 AA_A72U73:G91U92_AA A 72 ? A 92 ? A 73 ? A 91 ? 1 A U 73 1_555 A G 91 1_555 A C 74 1_555 A G 90 1_555 0.307 -2.058 3.148 4.494 8.035 26.215 -5.994 0.312 2.440 17.059 -9.541 27.757 42 AA_U73C74:G90G91_AA A 73 ? A 91 ? A 74 ? A 90 ? 1 A C 74 1_555 A G 90 1_555 A A 75 1_555 A U 89 1_555 -0.045 -1.685 3.290 1.574 8.739 30.169 -4.644 0.359 2.703 16.349 -2.944 31.419 43 AA_C74A75:U89G90_AA A 74 ? A 90 ? A 75 ? A 89 ? 1 A A 75 1_555 A U 89 1_555 A G 77 1_555 A C 88 1_555 -0.425 -2.196 4.471 25.515 41.751 50.384 -3.766 1.493 1.971 40.025 -24.461 69.098 44 AA_A75G77:C88U89_AA A 75 ? A 89 ? A 77 ? A 88 ? 1 A G 77 1_555 A C 88 1_555 A U 78 1_555 A G 87 1_555 0.153 -1.559 3.260 0.997 4.795 40.620 -2.741 -0.112 3.067 6.877 -1.430 40.902 45 AA_G77U78:G87C88_AA A 77 ? A 88 ? A 78 ? A 87 ? 1 A U 78 1_555 A G 87 1_555 A C 79 1_555 A G 86 1_555 0.251 -2.082 3.098 4.409 6.892 25.975 -5.935 0.432 2.482 14.871 -9.513 27.212 46 AA_U78C79:G86G87_AA A 78 ? A 87 ? A 79 ? A 86 ? # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 2330652 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9YXA _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_ #