data_9YYX # _entry.id 9YYX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9YYX pdb_00009yyx 10.2210/pdb9yyx/pdb WWPDB D_1000298370 ? ? EMDB EMD-73658 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-11-04 ? 2 'EM metadata' 1 0 2026-11-04 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9YYX _pdbx_database_status.recvd_initial_deposition_date 2025-10-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of HKU1 spike with antibody HKU1-11 (local refinement of CTD, NTD, and Fab variable domain)' _pdbx_database_related.db_id EMD-73658 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email andrew@scripps.edu _pdbx_contact_author.name_first Andrew _pdbx_contact_author.name_last Ward _pdbx_contact_author.name_mi B. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7153-3769 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Feng, Z.' 1 0000-0001-5046-9788 'Bangaru, S.' 2 0000-0001-7994-4693 'Ward, A.B.' 3 0000-0001-7153-3769 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structures of HKU1 spike protein with antibodies' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bangaru, S.' 1 ? primary 'Feng, Z.' 2 ? primary 'Ward, A.B.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HKU1-11 Fab heavy chain' 13833.499 1 ? ? ? ? 2 polymer man 'HKU1-11 Fab light chain' 11489.594 1 ? ? ? ? 3 polymer man 'Spike protein S1 CTD' 31627.406 1 ? ? ? ? 4 polymer man 'Spike protein S1 NTD' 33305.527 1 ? ? ? ? 5 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose' 570.542 1 ? ? ? ? 6 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 2 ? ? ? ? 7 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 6 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QVQLQESGPGLVKPSETLSLTCTVSGGSISSYFWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLRSRVTISVDTSKNQFSL KLSYVTAADTAVYYCARLSCGADCYPIPKLSWFDPWGQGTLVTVSS ; ;QVQLQESGPGLVKPSETLSLTCTVSGGSISSYFWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLRSRVTISVDTSKNQFSL KLSYVTAADTAVYYCARLSCGADCYPIPKLSWFDPWGQGTLVTVSS ; A ? 2 'polypeptide(L)' no no ;QSVLTQPPSASGTPGQRVTISCSGGSSNIGSNYVYWYQQLPGTAPKLLIYRNTQRPSGVPDRFSGSKSGTSASLAISGLR SEDEADYYCAAWDDSLSGPVFGGGTKVTVL ; ;QSVLTQPPSASGTPGQRVTISCSGGSSNIGSNYVYWYQQLPGTAPKLLIYRNTQRPSGVPDRFSGSKSGTSASLAISGLR SEDEADYYCAAWDDSLSGPVFGGGTKVTVL ; B ? 3 'polypeptide(L)' no no ;CDIDNWLNNVSVPSPLNWERRIFSNCNFNLSTLLRLVHVDSFSCNNLDKSKIFGSCFNSITVDKFAIPNRRRDDLQLGSS GFLQSSNYKIDISSSSCQLYYSLPLVNVTINNFNPSSWNRRYGFGSFNLSSYDVVYSDHCFSVNSDFCPCADPSVVNSCA KSKPPSAICPAGTKYRHCDLDTTLYVKNWCRCSCLPDPISTYSPNTCPQKKVVVGIGEHCPGLGINEEKCGTQLNHSSCF CSPDAFLGWSFDSCISNNRCNIFSNFIFNGINSGTTCSNDLLYS ; ;CDIDNWLNNVSVPSPLNWERRIFSNCNFNLSTLLRLVHVDSFSCNNLDKSKIFGSCFNSITVDKFAIPNRRRDDLQLGSS GFLQSSNYKIDISSSSCQLYYSLPLVNVTINNFNPSSWNRRYGFGSFNLSSYDVVYSDHCFSVNSDFCPCADPSVVNSCA KSKPPSAICPAGTKYRHCDLDTTLYVKNWCRCSCLPDPISTYSPNTCPQKKVVVGIGEHCPGLGINEEKCGTQLNHSSCF CSPDAFLGWSFDSCISNNRCNIFSNFIFNGINSGTTCSNDLLYS ; C ? 4 'polypeptide(L)' no no ;VIGDFNCTNSFINDYNKTIPRISEDVVDVSLGLGTYYVLNRVYLNTTLLFTGYFPKSGANFRDLALKGSIYLSTLWYKPP FLSDFNNGIFSKVKNTKLYVNNTLYSEFSTIVIGSVFVNTSYTIVVQPHNGILEITACQYTMCEYPHTVCKSKGSIRNES WHIDSSEPLCLFKKNFTYNVSADWLYFHFYQERGVFYAYYADVGMPTTFLFSLYLGTILSHYYVMPLTCNAISSNTDNET LEYWVTPLSRRQYLLNFDEHGVITNAVDCSSSFLSEIQCKTQSFAPNTGVY ; ;VIGDFNCTNSFINDYNKTIPRISEDVVDVSLGLGTYYVLNRVYLNTTLLFTGYFPKSGANFRDLALKGSIYLSTLWYKPP FLSDFNNGIFSKVKNTKLYVNNTLYSEFSTIVIGSVFVNTSYTIVVQPHNGILEITACQYTMCEYPHTVCKSKGSIRNES WHIDSSEPLCLFKKNFTYNVSADWLYFHFYQERGVFYAYYADVGMPTTFLFSLYLGTILSHYYVMPLTCNAISSNTDNET LEYWVTPLSRRQYLLNFDEHGVITNAVDCSSSFLSEIQCKTQSFAPNTGVY ; D ? # _pdbx_entity_nonpoly.entity_id 7 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 PRO n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 LYS n 1 14 PRO n 1 15 SER n 1 16 GLU n 1 17 THR n 1 18 LEU n 1 19 SER n 1 20 LEU n 1 21 THR n 1 22 CYS n 1 23 THR n 1 24 VAL n 1 25 SER n 1 26 GLY n 1 27 GLY n 1 28 SER n 1 29 ILE n 1 30 SER n 1 31 SER n 1 32 TYR n 1 33 PHE n 1 34 TRP n 1 35 SER n 1 36 TRP n 1 37 ILE n 1 38 ARG n 1 39 GLN n 1 40 PRO n 1 41 PRO n 1 42 GLY n 1 43 LYS n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 TRP n 1 48 ILE n 1 49 GLY n 1 50 TYR n 1 51 ILE n 1 52 TYR n 1 53 TYR n 1 54 SER n 1 55 GLY n 1 56 SER n 1 57 THR n 1 58 ASN n 1 59 TYR n 1 60 ASN n 1 61 PRO n 1 62 SER n 1 63 LEU n 1 64 ARG n 1 65 SER n 1 66 ARG n 1 67 VAL n 1 68 THR n 1 69 ILE n 1 70 SER n 1 71 VAL n 1 72 ASP n 1 73 THR n 1 74 SER n 1 75 LYS n 1 76 ASN n 1 77 GLN n 1 78 PHE n 1 79 SER n 1 80 LEU n 1 81 LYS n 1 82 LEU n 1 83 SER n 1 84 TYR n 1 85 VAL n 1 86 THR n 1 87 ALA n 1 88 ALA n 1 89 ASP n 1 90 THR n 1 91 ALA n 1 92 VAL n 1 93 TYR n 1 94 TYR n 1 95 CYS n 1 96 ALA n 1 97 ARG n 1 98 LEU n 1 99 SER n 1 100 CYS n 1 101 GLY n 1 102 ALA n 1 103 ASP n 1 104 CYS n 1 105 TYR n 1 106 PRO n 1 107 ILE n 1 108 PRO n 1 109 LYS n 1 110 LEU n 1 111 SER n 1 112 TRP n 1 113 PHE n 1 114 ASP n 1 115 PRO n 1 116 TRP n 1 117 GLY n 1 118 GLN n 1 119 GLY n 1 120 THR n 1 121 LEU n 1 122 VAL n 1 123 THR n 1 124 VAL n 1 125 SER n 1 126 SER n 2 1 GLN n 2 2 SER n 2 3 VAL n 2 4 LEU n 2 5 THR n 2 6 GLN n 2 7 PRO n 2 8 PRO n 2 9 SER n 2 10 ALA n 2 11 SER n 2 12 GLY n 2 13 THR n 2 14 PRO n 2 15 GLY n 2 16 GLN n 2 17 ARG n 2 18 VAL n 2 19 THR n 2 20 ILE n 2 21 SER n 2 22 CYS n 2 23 SER n 2 24 GLY n 2 25 GLY n 2 26 SER n 2 27 SER n 2 28 ASN n 2 29 ILE n 2 30 GLY n 2 31 SER n 2 32 ASN n 2 33 TYR n 2 34 VAL n 2 35 TYR n 2 36 TRP n 2 37 TYR n 2 38 GLN n 2 39 GLN n 2 40 LEU n 2 41 PRO n 2 42 GLY n 2 43 THR n 2 44 ALA n 2 45 PRO n 2 46 LYS n 2 47 LEU n 2 48 LEU n 2 49 ILE n 2 50 TYR n 2 51 ARG n 2 52 ASN n 2 53 THR n 2 54 GLN n 2 55 ARG n 2 56 PRO n 2 57 SER n 2 58 GLY n 2 59 VAL n 2 60 PRO n 2 61 ASP n 2 62 ARG n 2 63 PHE n 2 64 SER n 2 65 GLY n 2 66 SER n 2 67 LYS n 2 68 SER n 2 69 GLY n 2 70 THR n 2 71 SER n 2 72 ALA n 2 73 SER n 2 74 LEU n 2 75 ALA n 2 76 ILE n 2 77 SER n 2 78 GLY n 2 79 LEU n 2 80 ARG n 2 81 SER n 2 82 GLU n 2 83 ASP n 2 84 GLU n 2 85 ALA n 2 86 ASP n 2 87 TYR n 2 88 TYR n 2 89 CYS n 2 90 ALA n 2 91 ALA n 2 92 TRP n 2 93 ASP n 2 94 ASP n 2 95 SER n 2 96 LEU n 2 97 SER n 2 98 GLY n 2 99 PRO n 2 100 VAL n 2 101 PHE n 2 102 GLY n 2 103 GLY n 2 104 GLY n 2 105 THR n 2 106 LYS n 2 107 VAL n 2 108 THR n 2 109 VAL n 2 110 LEU n 3 1 CYS n 3 2 ASP n 3 3 ILE n 3 4 ASP n 3 5 ASN n 3 6 TRP n 3 7 LEU n 3 8 ASN n 3 9 ASN n 3 10 VAL n 3 11 SER n 3 12 VAL n 3 13 PRO n 3 14 SER n 3 15 PRO n 3 16 LEU n 3 17 ASN n 3 18 TRP n 3 19 GLU n 3 20 ARG n 3 21 ARG n 3 22 ILE n 3 23 PHE n 3 24 SER n 3 25 ASN n 3 26 CYS n 3 27 ASN n 3 28 PHE n 3 29 ASN n 3 30 LEU n 3 31 SER n 3 32 THR n 3 33 LEU n 3 34 LEU n 3 35 ARG n 3 36 LEU n 3 37 VAL n 3 38 HIS n 3 39 VAL n 3 40 ASP n 3 41 SER n 3 42 PHE n 3 43 SER n 3 44 CYS n 3 45 ASN n 3 46 ASN n 3 47 LEU n 3 48 ASP n 3 49 LYS n 3 50 SER n 3 51 LYS n 3 52 ILE n 3 53 PHE n 3 54 GLY n 3 55 SER n 3 56 CYS n 3 57 PHE n 3 58 ASN n 3 59 SER n 3 60 ILE n 3 61 THR n 3 62 VAL n 3 63 ASP n 3 64 LYS n 3 65 PHE n 3 66 ALA n 3 67 ILE n 3 68 PRO n 3 69 ASN n 3 70 ARG n 3 71 ARG n 3 72 ARG n 3 73 ASP n 3 74 ASP n 3 75 LEU n 3 76 GLN n 3 77 LEU n 3 78 GLY n 3 79 SER n 3 80 SER n 3 81 GLY n 3 82 PHE n 3 83 LEU n 3 84 GLN n 3 85 SER n 3 86 SER n 3 87 ASN n 3 88 TYR n 3 89 LYS n 3 90 ILE n 3 91 ASP n 3 92 ILE n 3 93 SER n 3 94 SER n 3 95 SER n 3 96 SER n 3 97 CYS n 3 98 GLN n 3 99 LEU n 3 100 TYR n 3 101 TYR n 3 102 SER n 3 103 LEU n 3 104 PRO n 3 105 LEU n 3 106 VAL n 3 107 ASN n 3 108 VAL n 3 109 THR n 3 110 ILE n 3 111 ASN n 3 112 ASN n 3 113 PHE n 3 114 ASN n 3 115 PRO n 3 116 SER n 3 117 SER n 3 118 TRP n 3 119 ASN n 3 120 ARG n 3 121 ARG n 3 122 TYR n 3 123 GLY n 3 124 PHE n 3 125 GLY n 3 126 SER n 3 127 PHE n 3 128 ASN n 3 129 LEU n 3 130 SER n 3 131 SER n 3 132 TYR n 3 133 ASP n 3 134 VAL n 3 135 VAL n 3 136 TYR n 3 137 SER n 3 138 ASP n 3 139 HIS n 3 140 CYS n 3 141 PHE n 3 142 SER n 3 143 VAL n 3 144 ASN n 3 145 SER n 3 146 ASP n 3 147 PHE n 3 148 CYS n 3 149 PRO n 3 150 CYS n 3 151 ALA n 3 152 ASP n 3 153 PRO n 3 154 SER n 3 155 VAL n 3 156 VAL n 3 157 ASN n 3 158 SER n 3 159 CYS n 3 160 ALA n 3 161 LYS n 3 162 SER n 3 163 LYS n 3 164 PRO n 3 165 PRO n 3 166 SER n 3 167 ALA n 3 168 ILE n 3 169 CYS n 3 170 PRO n 3 171 ALA n 3 172 GLY n 3 173 THR n 3 174 LYS n 3 175 TYR n 3 176 ARG n 3 177 HIS n 3 178 CYS n 3 179 ASP n 3 180 LEU n 3 181 ASP n 3 182 THR n 3 183 THR n 3 184 LEU n 3 185 TYR n 3 186 VAL n 3 187 LYS n 3 188 ASN n 3 189 TRP n 3 190 CYS n 3 191 ARG n 3 192 CYS n 3 193 SER n 3 194 CYS n 3 195 LEU n 3 196 PRO n 3 197 ASP n 3 198 PRO n 3 199 ILE n 3 200 SER n 3 201 THR n 3 202 TYR n 3 203 SER n 3 204 PRO n 3 205 ASN n 3 206 THR n 3 207 CYS n 3 208 PRO n 3 209 GLN n 3 210 LYS n 3 211 LYS n 3 212 VAL n 3 213 VAL n 3 214 VAL n 3 215 GLY n 3 216 ILE n 3 217 GLY n 3 218 GLU n 3 219 HIS n 3 220 CYS n 3 221 PRO n 3 222 GLY n 3 223 LEU n 3 224 GLY n 3 225 ILE n 3 226 ASN n 3 227 GLU n 3 228 GLU n 3 229 LYS n 3 230 CYS n 3 231 GLY n 3 232 THR n 3 233 GLN n 3 234 LEU n 3 235 ASN n 3 236 HIS n 3 237 SER n 3 238 SER n 3 239 CYS n 3 240 PHE n 3 241 CYS n 3 242 SER n 3 243 PRO n 3 244 ASP n 3 245 ALA n 3 246 PHE n 3 247 LEU n 3 248 GLY n 3 249 TRP n 3 250 SER n 3 251 PHE n 3 252 ASP n 3 253 SER n 3 254 CYS n 3 255 ILE n 3 256 SER n 3 257 ASN n 3 258 ASN n 3 259 ARG n 3 260 CYS n 3 261 ASN n 3 262 ILE n 3 263 PHE n 3 264 SER n 3 265 ASN n 3 266 PHE n 3 267 ILE n 3 268 PHE n 3 269 ASN n 3 270 GLY n 3 271 ILE n 3 272 ASN n 3 273 SER n 3 274 GLY n 3 275 THR n 3 276 THR n 3 277 CYS n 3 278 SER n 3 279 ASN n 3 280 ASP n 3 281 LEU n 3 282 LEU n 3 283 TYR n 3 284 SER n 4 1 VAL n 4 2 ILE n 4 3 GLY n 4 4 ASP n 4 5 PHE n 4 6 ASN n 4 7 CYS n 4 8 THR n 4 9 ASN n 4 10 SER n 4 11 PHE n 4 12 ILE n 4 13 ASN n 4 14 ASP n 4 15 TYR n 4 16 ASN n 4 17 LYS n 4 18 THR n 4 19 ILE n 4 20 PRO n 4 21 ARG n 4 22 ILE n 4 23 SER n 4 24 GLU n 4 25 ASP n 4 26 VAL n 4 27 VAL n 4 28 ASP n 4 29 VAL n 4 30 SER n 4 31 LEU n 4 32 GLY n 4 33 LEU n 4 34 GLY n 4 35 THR n 4 36 TYR n 4 37 TYR n 4 38 VAL n 4 39 LEU n 4 40 ASN n 4 41 ARG n 4 42 VAL n 4 43 TYR n 4 44 LEU n 4 45 ASN n 4 46 THR n 4 47 THR n 4 48 LEU n 4 49 LEU n 4 50 PHE n 4 51 THR n 4 52 GLY n 4 53 TYR n 4 54 PHE n 4 55 PRO n 4 56 LYS n 4 57 SER n 4 58 GLY n 4 59 ALA n 4 60 ASN n 4 61 PHE n 4 62 ARG n 4 63 ASP n 4 64 LEU n 4 65 ALA n 4 66 LEU n 4 67 LYS n 4 68 GLY n 4 69 SER n 4 70 ILE n 4 71 TYR n 4 72 LEU n 4 73 SER n 4 74 THR n 4 75 LEU n 4 76 TRP n 4 77 TYR n 4 78 LYS n 4 79 PRO n 4 80 PRO n 4 81 PHE n 4 82 LEU n 4 83 SER n 4 84 ASP n 4 85 PHE n 4 86 ASN n 4 87 ASN n 4 88 GLY n 4 89 ILE n 4 90 PHE n 4 91 SER n 4 92 LYS n 4 93 VAL n 4 94 LYS n 4 95 ASN n 4 96 THR n 4 97 LYS n 4 98 LEU n 4 99 TYR n 4 100 VAL n 4 101 ASN n 4 102 ASN n 4 103 THR n 4 104 LEU n 4 105 TYR n 4 106 SER n 4 107 GLU n 4 108 PHE n 4 109 SER n 4 110 THR n 4 111 ILE n 4 112 VAL n 4 113 ILE n 4 114 GLY n 4 115 SER n 4 116 VAL n 4 117 PHE n 4 118 VAL n 4 119 ASN n 4 120 THR n 4 121 SER n 4 122 TYR n 4 123 THR n 4 124 ILE n 4 125 VAL n 4 126 VAL n 4 127 GLN n 4 128 PRO n 4 129 HIS n 4 130 ASN n 4 131 GLY n 4 132 ILE n 4 133 LEU n 4 134 GLU n 4 135 ILE n 4 136 THR n 4 137 ALA n 4 138 CYS n 4 139 GLN n 4 140 TYR n 4 141 THR n 4 142 MET n 4 143 CYS n 4 144 GLU n 4 145 TYR n 4 146 PRO n 4 147 HIS n 4 148 THR n 4 149 VAL n 4 150 CYS n 4 151 LYS n 4 152 SER n 4 153 LYS n 4 154 GLY n 4 155 SER n 4 156 ILE n 4 157 ARG n 4 158 ASN n 4 159 GLU n 4 160 SER n 4 161 TRP n 4 162 HIS n 4 163 ILE n 4 164 ASP n 4 165 SER n 4 166 SER n 4 167 GLU n 4 168 PRO n 4 169 LEU n 4 170 CYS n 4 171 LEU n 4 172 PHE n 4 173 LYS n 4 174 LYS n 4 175 ASN n 4 176 PHE n 4 177 THR n 4 178 TYR n 4 179 ASN n 4 180 VAL n 4 181 SER n 4 182 ALA n 4 183 ASP n 4 184 TRP n 4 185 LEU n 4 186 TYR n 4 187 PHE n 4 188 HIS n 4 189 PHE n 4 190 TYR n 4 191 GLN n 4 192 GLU n 4 193 ARG n 4 194 GLY n 4 195 VAL n 4 196 PHE n 4 197 TYR n 4 198 ALA n 4 199 TYR n 4 200 TYR n 4 201 ALA n 4 202 ASP n 4 203 VAL n 4 204 GLY n 4 205 MET n 4 206 PRO n 4 207 THR n 4 208 THR n 4 209 PHE n 4 210 LEU n 4 211 PHE n 4 212 SER n 4 213 LEU n 4 214 TYR n 4 215 LEU n 4 216 GLY n 4 217 THR n 4 218 ILE n 4 219 LEU n 4 220 SER n 4 221 HIS n 4 222 TYR n 4 223 TYR n 4 224 VAL n 4 225 MET n 4 226 PRO n 4 227 LEU n 4 228 THR n 4 229 CYS n 4 230 ASN n 4 231 ALA n 4 232 ILE n 4 233 SER n 4 234 SER n 4 235 ASN n 4 236 THR n 4 237 ASP n 4 238 ASN n 4 239 GLU n 4 240 THR n 4 241 LEU n 4 242 GLU n 4 243 TYR n 4 244 TRP n 4 245 VAL n 4 246 THR n 4 247 PRO n 4 248 LEU n 4 249 SER n 4 250 ARG n 4 251 ARG n 4 252 GLN n 4 253 TYR n 4 254 LEU n 4 255 LEU n 4 256 ASN n 4 257 PHE n 4 258 ASP n 4 259 GLU n 4 260 HIS n 4 261 GLY n 4 262 VAL n 4 263 ILE n 4 264 THR n 4 265 ASN n 4 266 ALA n 4 267 VAL n 4 268 ASP n 4 269 CYS n 4 270 SER n 4 271 SER n 4 272 SER n 4 273 PHE n 4 274 LEU n 4 275 SER n 4 276 GLU n 4 277 ILE n 4 278 GLN n 4 279 CYS n 4 280 LYS n 4 281 THR n 4 282 GLN n 4 283 SER n 4 284 PHE n 4 285 ALA n 4 286 PRO n 4 287 ASN n 4 288 THR n 4 289 GLY n 4 290 VAL n 4 291 TYR n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 126 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 110 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 284 ? ? 'S, 3' ? ? ? ? ? ? 'Human coronavirus HKU1 (isolate N5)' 443241 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 'Biological sequence' 1 291 ? ? 'S, 3' ? ? ? ? ? ? 'Human coronavirus HKU1 (isolate N5)' 443241 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 5 oligosaccharide 6 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 5 'DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-ROH' 'Glycam Condensed Sequence' GMML 1.0 2 5 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-1-2/a4-b1_a6-c1' WURCS PDB2Glycan 1.1.0 3 5 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}[(6+1)][a-L-Fucp]{}}' LINUCS PDB-CARE ? 4 6 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 5 6 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 6 6 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 5 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 5 3 FUC C1 O1 1 NAG O6 HO6 sing ? 3 6 2 NAG C1 O1 1 NAG O4 HO4 sing ? 4 6 3 BMA C1 O1 2 NAG O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 TRP 34 34 34 TRP TRP A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 TRP 36 36 36 TRP TRP A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 TRP 47 47 47 TRP TRP A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 SER 83 82 82 SER SER A A n A 1 84 TYR 84 82 82 TYR TYR A B n A 1 85 VAL 85 82 82 VAL VAL A C n A 1 86 THR 86 83 83 THR THR A . n A 1 87 ALA 87 84 84 ALA ALA A . n A 1 88 ALA 88 85 85 ALA ALA A . n A 1 89 ASP 89 86 86 ASP ASP A . n A 1 90 THR 90 87 87 THR THR A . n A 1 91 ALA 91 88 88 ALA ALA A . n A 1 92 VAL 92 89 89 VAL VAL A . n A 1 93 TYR 93 90 90 TYR TYR A . n A 1 94 TYR 94 91 91 TYR TYR A . n A 1 95 CYS 95 92 92 CYS CYS A . n A 1 96 ALA 96 93 93 ALA ALA A . n A 1 97 ARG 97 94 94 ARG ARG A . n A 1 98 LEU 98 95 95 LEU LEU A . n A 1 99 SER 99 96 96 SER SER A . n A 1 100 CYS 100 97 97 CYS CYS A . n A 1 101 GLY 101 98 98 GLY GLY A . n A 1 102 ALA 102 99 99 ALA ALA A . n A 1 103 ASP 103 100 100 ASP ASP A . n A 1 104 CYS 104 100 100 CYS CYS A A n A 1 105 TYR 105 100 100 TYR TYR A B n A 1 106 PRO 106 100 100 PRO PRO A C n A 1 107 ILE 107 100 100 ILE ILE A D n A 1 108 PRO 108 100 100 PRO PRO A E n A 1 109 LYS 109 100 100 LYS LYS A F n A 1 110 LEU 110 100 100 LEU LEU A G n A 1 111 SER 111 100 100 SER SER A H n A 1 112 TRP 112 100 100 TRP TRP A I n A 1 113 PHE 113 100 100 PHE PHE A J n A 1 114 ASP 114 101 101 ASP ASP A . n A 1 115 PRO 115 102 102 PRO PRO A . n A 1 116 TRP 116 103 103 TRP TRP A . n A 1 117 GLY 117 104 104 GLY GLY A . n A 1 118 GLN 118 105 105 GLN GLN A . n A 1 119 GLY 119 106 106 GLY GLY A . n A 1 120 THR 120 107 107 THR THR A . n A 1 121 LEU 121 108 108 LEU LEU A . n A 1 122 VAL 122 109 109 VAL VAL A . n A 1 123 THR 123 110 110 THR THR A . n A 1 124 VAL 124 111 111 VAL VAL A . n A 1 125 SER 125 112 112 SER SER A . n A 1 126 SER 126 113 113 SER SER A . n B 2 1 GLN 1 1 1 GLN GLN B . n B 2 2 SER 2 2 2 SER SER B . n B 2 3 VAL 3 3 3 VAL VAL B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 THR 5 5 5 THR THR B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 PRO 7 7 7 PRO PRO B . n B 2 8 PRO 8 8 8 PRO PRO B . n B 2 9 SER 9 9 9 SER SER B . n B 2 10 ALA 10 11 11 ALA ALA B . n B 2 11 SER 11 12 12 SER SER B . n B 2 12 GLY 12 13 13 GLY GLY B . n B 2 13 THR 13 14 14 THR THR B . n B 2 14 PRO 14 15 15 PRO PRO B . n B 2 15 GLY 15 16 16 GLY GLY B . n B 2 16 GLN 16 17 17 GLN GLN B . n B 2 17 ARG 17 18 18 ARG ARG B . n B 2 18 VAL 18 19 19 VAL VAL B . n B 2 19 THR 19 20 20 THR THR B . n B 2 20 ILE 20 21 21 ILE ILE B . n B 2 21 SER 21 22 22 SER SER B . n B 2 22 CYS 22 23 23 CYS CYS B . n B 2 23 SER 23 24 24 SER SER B . n B 2 24 GLY 24 25 25 GLY GLY B . n B 2 25 GLY 25 26 26 GLY GLY B . n B 2 26 SER 26 27 27 SER SER B . n B 2 27 SER 27 27 27 SER SER B A n B 2 28 ASN 28 27 27 ASN ASN B B n B 2 29 ILE 29 28 28 ILE ILE B . n B 2 30 GLY 30 29 29 GLY GLY B . n B 2 31 SER 31 30 30 SER SER B . n B 2 32 ASN 32 31 31 ASN ASN B . n B 2 33 TYR 33 32 32 TYR TYR B . n B 2 34 VAL 34 33 33 VAL VAL B . n B 2 35 TYR 35 34 34 TYR TYR B . n B 2 36 TRP 36 35 35 TRP TRP B . n B 2 37 TYR 37 36 36 TYR TYR B . n B 2 38 GLN 38 37 37 GLN GLN B . n B 2 39 GLN 39 38 38 GLN GLN B . n B 2 40 LEU 40 39 39 LEU LEU B . n B 2 41 PRO 41 40 40 PRO PRO B . n B 2 42 GLY 42 41 41 GLY GLY B . n B 2 43 THR 43 42 42 THR THR B . n B 2 44 ALA 44 43 43 ALA ALA B . n B 2 45 PRO 45 44 44 PRO PRO B . n B 2 46 LYS 46 45 45 LYS LYS B . n B 2 47 LEU 47 46 46 LEU LEU B . n B 2 48 LEU 48 47 47 LEU LEU B . n B 2 49 ILE 49 48 48 ILE ILE B . n B 2 50 TYR 50 49 49 TYR TYR B . n B 2 51 ARG 51 50 50 ARG ARG B . n B 2 52 ASN 52 51 51 ASN ASN B . n B 2 53 THR 53 52 52 THR THR B . n B 2 54 GLN 54 53 53 GLN GLN B . n B 2 55 ARG 55 54 54 ARG ARG B . n B 2 56 PRO 56 55 55 PRO PRO B . n B 2 57 SER 57 56 56 SER SER B . n B 2 58 GLY 58 57 57 GLY GLY B . n B 2 59 VAL 59 58 58 VAL VAL B . n B 2 60 PRO 60 59 59 PRO PRO B . n B 2 61 ASP 61 60 60 ASP ASP B . n B 2 62 ARG 62 61 61 ARG ARG B . n B 2 63 PHE 63 62 62 PHE PHE B . n B 2 64 SER 64 63 63 SER SER B . n B 2 65 GLY 65 64 64 GLY GLY B . n B 2 66 SER 66 65 65 SER SER B . n B 2 67 LYS 67 66 66 LYS LYS B . n B 2 68 SER 68 67 67 SER SER B . n B 2 69 GLY 69 68 68 GLY GLY B . n B 2 70 THR 70 69 69 THR THR B . n B 2 71 SER 71 70 70 SER SER B . n B 2 72 ALA 72 71 71 ALA ALA B . n B 2 73 SER 73 72 72 SER SER B . n B 2 74 LEU 74 73 73 LEU LEU B . n B 2 75 ALA 75 74 74 ALA ALA B . n B 2 76 ILE 76 75 75 ILE ILE B . n B 2 77 SER 77 76 76 SER SER B . n B 2 78 GLY 78 77 77 GLY GLY B . n B 2 79 LEU 79 78 78 LEU LEU B . n B 2 80 ARG 80 79 79 ARG ARG B . n B 2 81 SER 81 80 80 SER SER B . n B 2 82 GLU 82 81 81 GLU GLU B . n B 2 83 ASP 83 82 82 ASP ASP B . n B 2 84 GLU 84 83 83 GLU GLU B . n B 2 85 ALA 85 84 84 ALA ALA B . n B 2 86 ASP 86 85 85 ASP ASP B . n B 2 87 TYR 87 86 86 TYR TYR B . n B 2 88 TYR 88 87 87 TYR TYR B . n B 2 89 CYS 89 88 88 CYS CYS B . n B 2 90 ALA 90 89 89 ALA ALA B . n B 2 91 ALA 91 90 90 ALA ALA B . n B 2 92 TRP 92 91 91 TRP TRP B . n B 2 93 ASP 93 92 92 ASP ASP B . n B 2 94 ASP 94 93 93 ASP ASP B . n B 2 95 SER 95 94 94 SER SER B . n B 2 96 LEU 96 95 95 LEU LEU B . n B 2 97 SER 97 95 95 SER SER B A n B 2 98 GLY 98 95 95 GLY GLY B B n B 2 99 PRO 99 96 96 PRO PRO B . n B 2 100 VAL 100 97 97 VAL VAL B . n B 2 101 PHE 101 98 98 PHE PHE B . n B 2 102 GLY 102 99 99 GLY GLY B . n B 2 103 GLY 103 100 100 GLY GLY B . n B 2 104 GLY 104 101 101 GLY GLY B . n B 2 105 THR 105 102 102 THR THR B . n B 2 106 LYS 106 103 103 LYS LYS B . n B 2 107 VAL 107 104 104 VAL VAL B . n B 2 108 THR 108 105 105 THR THR B . n B 2 109 VAL 109 106 106 VAL VAL B . n B 2 110 LEU 110 106 106 LEU LEU B A n C 3 1 CYS 1 327 327 CYS CYS C . n C 3 2 ASP 2 328 328 ASP ASP C . n C 3 3 ILE 3 329 329 ILE ILE C . n C 3 4 ASP 4 330 330 ASP ASP C . n C 3 5 ASN 5 331 331 ASN ASN C . n C 3 6 TRP 6 332 332 TRP TRP C . n C 3 7 LEU 7 333 333 LEU LEU C . n C 3 8 ASN 8 334 334 ASN ASN C . n C 3 9 ASN 9 335 335 ASN ASN C . n C 3 10 VAL 10 336 336 VAL VAL C . n C 3 11 SER 11 337 337 SER SER C . n C 3 12 VAL 12 338 338 VAL VAL C . n C 3 13 PRO 13 339 339 PRO PRO C . n C 3 14 SER 14 340 340 SER SER C . n C 3 15 PRO 15 341 341 PRO PRO C . n C 3 16 LEU 16 342 342 LEU LEU C . n C 3 17 ASN 17 343 343 ASN ASN C . n C 3 18 TRP 18 344 344 TRP TRP C . n C 3 19 GLU 19 345 345 GLU GLU C . n C 3 20 ARG 20 346 346 ARG ARG C . n C 3 21 ARG 21 347 347 ARG ARG C . n C 3 22 ILE 22 348 348 ILE ILE C . n C 3 23 PHE 23 349 349 PHE PHE C . n C 3 24 SER 24 350 350 SER SER C . n C 3 25 ASN 25 351 351 ASN ASN C . n C 3 26 CYS 26 352 352 CYS CYS C . n C 3 27 ASN 27 353 353 ASN ASN C . n C 3 28 PHE 28 354 354 PHE PHE C . n C 3 29 ASN 29 355 355 ASN ASN C . n C 3 30 LEU 30 356 356 LEU LEU C . n C 3 31 SER 31 357 357 SER SER C . n C 3 32 THR 32 358 358 THR THR C . n C 3 33 LEU 33 359 359 LEU LEU C . n C 3 34 LEU 34 360 360 LEU LEU C . n C 3 35 ARG 35 361 361 ARG ARG C . n C 3 36 LEU 36 362 362 LEU LEU C . n C 3 37 VAL 37 363 363 VAL VAL C . n C 3 38 HIS 38 364 364 HIS HIS C . n C 3 39 VAL 39 365 365 VAL VAL C . n C 3 40 ASP 40 366 366 ASP ASP C . n C 3 41 SER 41 367 367 SER SER C . n C 3 42 PHE 42 368 368 PHE PHE C . n C 3 43 SER 43 369 369 SER SER C . n C 3 44 CYS 44 370 370 CYS CYS C . n C 3 45 ASN 45 371 371 ASN ASN C . n C 3 46 ASN 46 372 372 ASN ASN C . n C 3 47 LEU 47 373 373 LEU LEU C . n C 3 48 ASP 48 374 374 ASP ASP C . n C 3 49 LYS 49 375 375 LYS LYS C . n C 3 50 SER 50 376 376 SER SER C . n C 3 51 LYS 51 377 377 LYS LYS C . n C 3 52 ILE 52 378 378 ILE ILE C . n C 3 53 PHE 53 379 379 PHE PHE C . n C 3 54 GLY 54 380 380 GLY GLY C . n C 3 55 SER 55 381 381 SER SER C . n C 3 56 CYS 56 382 382 CYS CYS C . n C 3 57 PHE 57 383 383 PHE PHE C . n C 3 58 ASN 58 384 384 ASN ASN C . n C 3 59 SER 59 385 385 SER SER C . n C 3 60 ILE 60 386 386 ILE ILE C . n C 3 61 THR 61 387 387 THR THR C . n C 3 62 VAL 62 388 388 VAL VAL C . n C 3 63 ASP 63 389 389 ASP ASP C . n C 3 64 LYS 64 390 390 LYS LYS C . n C 3 65 PHE 65 391 391 PHE PHE C . n C 3 66 ALA 66 392 392 ALA ALA C . n C 3 67 ILE 67 393 393 ILE ILE C . n C 3 68 PRO 68 394 394 PRO PRO C . n C 3 69 ASN 69 395 395 ASN ASN C . n C 3 70 ARG 70 396 396 ARG ARG C . n C 3 71 ARG 71 397 397 ARG ARG C . n C 3 72 ARG 72 398 398 ARG ARG C . n C 3 73 ASP 73 399 399 ASP ASP C . n C 3 74 ASP 74 400 400 ASP ASP C . n C 3 75 LEU 75 401 401 LEU LEU C . n C 3 76 GLN 76 402 402 GLN GLN C . n C 3 77 LEU 77 403 403 LEU LEU C . n C 3 78 GLY 78 404 404 GLY GLY C . n C 3 79 SER 79 405 405 SER SER C . n C 3 80 SER 80 406 406 SER SER C . n C 3 81 GLY 81 407 407 GLY GLY C . n C 3 82 PHE 82 408 408 PHE PHE C . n C 3 83 LEU 83 409 409 LEU LEU C . n C 3 84 GLN 84 410 410 GLN GLN C . n C 3 85 SER 85 411 411 SER SER C . n C 3 86 SER 86 412 412 SER SER C . n C 3 87 ASN 87 413 413 ASN ASN C . n C 3 88 TYR 88 414 414 TYR TYR C . n C 3 89 LYS 89 415 415 LYS LYS C . n C 3 90 ILE 90 416 416 ILE ILE C . n C 3 91 ASP 91 417 417 ASP ASP C . n C 3 92 ILE 92 418 418 ILE ILE C . n C 3 93 SER 93 419 419 SER SER C . n C 3 94 SER 94 420 420 SER SER C . n C 3 95 SER 95 421 421 SER SER C . n C 3 96 SER 96 422 422 SER SER C . n C 3 97 CYS 97 423 423 CYS CYS C . n C 3 98 GLN 98 424 424 GLN GLN C . n C 3 99 LEU 99 425 425 LEU LEU C . n C 3 100 TYR 100 426 426 TYR TYR C . n C 3 101 TYR 101 427 427 TYR TYR C . n C 3 102 SER 102 428 428 SER SER C . n C 3 103 LEU 103 429 429 LEU LEU C . n C 3 104 PRO 104 430 430 PRO PRO C . n C 3 105 LEU 105 431 431 LEU LEU C . n C 3 106 VAL 106 432 432 VAL VAL C . n C 3 107 ASN 107 433 433 ASN ASN C . n C 3 108 VAL 108 434 434 VAL VAL C . n C 3 109 THR 109 435 435 THR THR C . n C 3 110 ILE 110 436 436 ILE ILE C . n C 3 111 ASN 111 437 437 ASN ASN C . n C 3 112 ASN 112 438 438 ASN ASN C . n C 3 113 PHE 113 439 439 PHE PHE C . n C 3 114 ASN 114 440 440 ASN ASN C . n C 3 115 PRO 115 441 441 PRO PRO C . n C 3 116 SER 116 442 442 SER SER C . n C 3 117 SER 117 443 443 SER SER C . n C 3 118 TRP 118 444 444 TRP TRP C . n C 3 119 ASN 119 445 445 ASN ASN C . n C 3 120 ARG 120 446 446 ARG ARG C . n C 3 121 ARG 121 447 447 ARG ARG C . n C 3 122 TYR 122 448 448 TYR TYR C . n C 3 123 GLY 123 449 449 GLY GLY C . n C 3 124 PHE 124 450 450 PHE PHE C . n C 3 125 GLY 125 451 451 GLY GLY C . n C 3 126 SER 126 452 452 SER SER C . n C 3 127 PHE 127 453 453 PHE PHE C . n C 3 128 ASN 128 454 454 ASN ASN C . n C 3 129 LEU 129 455 455 LEU LEU C . n C 3 130 SER 130 456 456 SER SER C . n C 3 131 SER 131 457 457 SER SER C . n C 3 132 TYR 132 458 458 TYR TYR C . n C 3 133 ASP 133 459 459 ASP ASP C . n C 3 134 VAL 134 460 460 VAL VAL C . n C 3 135 VAL 135 461 461 VAL VAL C . n C 3 136 TYR 136 462 462 TYR TYR C . n C 3 137 SER 137 463 463 SER SER C . n C 3 138 ASP 138 464 464 ASP ASP C . n C 3 139 HIS 139 465 465 HIS HIS C . n C 3 140 CYS 140 466 466 CYS CYS C . n C 3 141 PHE 141 467 467 PHE PHE C . n C 3 142 SER 142 468 468 SER SER C . n C 3 143 VAL 143 469 469 VAL VAL C . n C 3 144 ASN 144 470 470 ASN ASN C . n C 3 145 SER 145 471 471 SER SER C . n C 3 146 ASP 146 472 472 ASP ASP C . n C 3 147 PHE 147 473 473 PHE PHE C . n C 3 148 CYS 148 474 474 CYS CYS C . n C 3 149 PRO 149 475 475 PRO PRO C . n C 3 150 CYS 150 476 476 CYS CYS C . n C 3 151 ALA 151 477 477 ALA ALA C . n C 3 152 ASP 152 478 478 ASP ASP C . n C 3 153 PRO 153 479 479 PRO PRO C . n C 3 154 SER 154 480 480 SER SER C . n C 3 155 VAL 155 481 481 VAL VAL C . n C 3 156 VAL 156 482 482 VAL VAL C . n C 3 157 ASN 157 483 483 ASN ASN C . n C 3 158 SER 158 484 484 SER SER C . n C 3 159 CYS 159 485 485 CYS CYS C . n C 3 160 ALA 160 486 486 ALA ALA C . n C 3 161 LYS 161 487 487 LYS LYS C . n C 3 162 SER 162 488 488 SER SER C . n C 3 163 LYS 163 489 489 LYS LYS C . n C 3 164 PRO 164 490 490 PRO PRO C . n C 3 165 PRO 165 491 491 PRO PRO C . n C 3 166 SER 166 492 492 SER SER C . n C 3 167 ALA 167 493 493 ALA ALA C . n C 3 168 ILE 168 494 494 ILE ILE C . n C 3 169 CYS 169 495 495 CYS CYS C . n C 3 170 PRO 170 496 496 PRO PRO C . n C 3 171 ALA 171 497 497 ALA ALA C . n C 3 172 GLY 172 498 498 GLY GLY C . n C 3 173 THR 173 499 499 THR THR C . n C 3 174 LYS 174 500 500 LYS LYS C . n C 3 175 TYR 175 501 501 TYR TYR C . n C 3 176 ARG 176 502 502 ARG ARG C . n C 3 177 HIS 177 503 503 HIS HIS C . n C 3 178 CYS 178 504 504 CYS CYS C . n C 3 179 ASP 179 505 505 ASP ASP C . n C 3 180 LEU 180 506 506 LEU LEU C . n C 3 181 ASP 181 507 507 ASP ASP C . n C 3 182 THR 182 508 508 THR THR C . n C 3 183 THR 183 509 509 THR THR C . n C 3 184 LEU 184 510 510 LEU LEU C . n C 3 185 TYR 185 511 ? ? ? C . n C 3 186 VAL 186 512 512 VAL VAL C . n C 3 187 LYS 187 513 513 LYS LYS C . n C 3 188 ASN 188 514 514 ASN ASN C . n C 3 189 TRP 189 515 515 TRP TRP C . n C 3 190 CYS 190 516 516 CYS CYS C . n C 3 191 ARG 191 517 517 ARG ARG C . n C 3 192 CYS 192 518 518 CYS CYS C . n C 3 193 SER 193 519 519 SER SER C . n C 3 194 CYS 194 520 520 CYS CYS C . n C 3 195 LEU 195 521 521 LEU LEU C . n C 3 196 PRO 196 522 522 PRO PRO C . n C 3 197 ASP 197 523 523 ASP ASP C . n C 3 198 PRO 198 524 524 PRO PRO C . n C 3 199 ILE 199 525 525 ILE ILE C . n C 3 200 SER 200 526 526 SER SER C . n C 3 201 THR 201 527 527 THR THR C . n C 3 202 TYR 202 528 528 TYR TYR C . n C 3 203 SER 203 529 529 SER SER C . n C 3 204 PRO 204 530 530 PRO PRO C . n C 3 205 ASN 205 531 531 ASN ASN C . n C 3 206 THR 206 532 532 THR THR C . n C 3 207 CYS 207 533 533 CYS CYS C . n C 3 208 PRO 208 534 534 PRO PRO C . n C 3 209 GLN 209 535 535 GLN GLN C . n C 3 210 LYS 210 536 536 LYS LYS C . n C 3 211 LYS 211 537 537 LYS LYS C . n C 3 212 VAL 212 538 538 VAL VAL C . n C 3 213 VAL 213 539 539 VAL VAL C . n C 3 214 VAL 214 540 540 VAL VAL C . n C 3 215 GLY 215 541 541 GLY GLY C . n C 3 216 ILE 216 542 542 ILE ILE C . n C 3 217 GLY 217 543 543 GLY GLY C . n C 3 218 GLU 218 544 544 GLU GLU C . n C 3 219 HIS 219 545 545 HIS HIS C . n C 3 220 CYS 220 546 546 CYS CYS C . n C 3 221 PRO 221 547 547 PRO PRO C . n C 3 222 GLY 222 548 548 GLY GLY C . n C 3 223 LEU 223 549 549 LEU LEU C . n C 3 224 GLY 224 550 550 GLY GLY C . n C 3 225 ILE 225 551 551 ILE ILE C . n C 3 226 ASN 226 552 552 ASN ASN C . n C 3 227 GLU 227 553 553 GLU GLU C . n C 3 228 GLU 228 554 554 GLU GLU C . n C 3 229 LYS 229 555 555 LYS LYS C . n C 3 230 CYS 230 556 556 CYS CYS C . n C 3 231 GLY 231 557 557 GLY GLY C . n C 3 232 THR 232 558 558 THR THR C . n C 3 233 GLN 233 559 559 GLN GLN C . n C 3 234 LEU 234 560 560 LEU LEU C . n C 3 235 ASN 235 561 561 ASN ASN C . n C 3 236 HIS 236 562 562 HIS HIS C . n C 3 237 SER 237 563 563 SER SER C . n C 3 238 SER 238 564 564 SER SER C . n C 3 239 CYS 239 565 565 CYS CYS C . n C 3 240 PHE 240 566 566 PHE PHE C . n C 3 241 CYS 241 567 567 CYS CYS C . n C 3 242 SER 242 568 568 SER SER C . n C 3 243 PRO 243 569 569 PRO PRO C . n C 3 244 ASP 244 570 570 ASP ASP C . n C 3 245 ALA 245 571 571 ALA ALA C . n C 3 246 PHE 246 572 572 PHE PHE C . n C 3 247 LEU 247 573 573 LEU LEU C . n C 3 248 GLY 248 574 574 GLY GLY C . n C 3 249 TRP 249 575 575 TRP TRP C . n C 3 250 SER 250 576 576 SER SER C . n C 3 251 PHE 251 577 577 PHE PHE C . n C 3 252 ASP 252 578 578 ASP ASP C . n C 3 253 SER 253 579 579 SER SER C . n C 3 254 CYS 254 580 580 CYS CYS C . n C 3 255 ILE 255 581 581 ILE ILE C . n C 3 256 SER 256 582 582 SER SER C . n C 3 257 ASN 257 583 583 ASN ASN C . n C 3 258 ASN 258 584 584 ASN ASN C . n C 3 259 ARG 259 585 585 ARG ARG C . n C 3 260 CYS 260 586 586 CYS CYS C . n C 3 261 ASN 261 587 587 ASN ASN C . n C 3 262 ILE 262 588 588 ILE ILE C . n C 3 263 PHE 263 589 589 PHE PHE C . n C 3 264 SER 264 590 590 SER SER C . n C 3 265 ASN 265 591 591 ASN ASN C . n C 3 266 PHE 266 592 592 PHE PHE C . n C 3 267 ILE 267 593 593 ILE ILE C . n C 3 268 PHE 268 594 594 PHE PHE C . n C 3 269 ASN 269 595 595 ASN ASN C . n C 3 270 GLY 270 596 596 GLY GLY C . n C 3 271 ILE 271 597 597 ILE ILE C . n C 3 272 ASN 272 598 598 ASN ASN C . n C 3 273 SER 273 599 599 SER SER C . n C 3 274 GLY 274 600 600 GLY GLY C . n C 3 275 THR 275 601 601 THR THR C . n C 3 276 THR 276 602 602 THR THR C . n C 3 277 CYS 277 603 603 CYS CYS C . n C 3 278 SER 278 604 604 SER SER C . n C 3 279 ASN 279 605 605 ASN ASN C . n C 3 280 ASP 280 606 606 ASP ASP C . n C 3 281 LEU 281 607 607 LEU LEU C . n C 3 282 LEU 282 608 608 LEU LEU C . n C 3 283 TYR 283 609 609 TYR TYR C . n C 3 284 SER 284 610 610 SER SER C . n D 4 1 VAL 1 14 14 VAL VAL D . n D 4 2 ILE 2 15 15 ILE ILE D . n D 4 3 GLY 3 16 16 GLY GLY D . n D 4 4 ASP 4 17 17 ASP ASP D . n D 4 5 PHE 5 18 18 PHE PHE D . n D 4 6 ASN 6 19 19 ASN ASN D . n D 4 7 CYS 7 20 20 CYS CYS D . n D 4 8 THR 8 21 21 THR THR D . n D 4 9 ASN 9 22 22 ASN ASN D . n D 4 10 SER 10 23 23 SER SER D . n D 4 11 PHE 11 24 24 PHE PHE D . n D 4 12 ILE 12 25 25 ILE ILE D . n D 4 13 ASN 13 26 26 ASN ASN D . n D 4 14 ASP 14 27 27 ASP ASP D . n D 4 15 TYR 15 28 28 TYR TYR D . n D 4 16 ASN 16 29 29 ASN ASN D . n D 4 17 LYS 17 30 30 LYS LYS D . n D 4 18 THR 18 31 31 THR THR D . n D 4 19 ILE 19 32 32 ILE ILE D . n D 4 20 PRO 20 33 33 PRO PRO D . n D 4 21 ARG 21 34 34 ARG ARG D . n D 4 22 ILE 22 35 35 ILE ILE D . n D 4 23 SER 23 36 36 SER SER D . n D 4 24 GLU 24 37 37 GLU GLU D . n D 4 25 ASP 25 38 38 ASP ASP D . n D 4 26 VAL 26 39 39 VAL VAL D . n D 4 27 VAL 27 40 40 VAL VAL D . n D 4 28 ASP 28 41 41 ASP ASP D . n D 4 29 VAL 29 42 42 VAL VAL D . n D 4 30 SER 30 43 43 SER SER D . n D 4 31 LEU 31 44 44 LEU LEU D . n D 4 32 GLY 32 45 45 GLY GLY D . n D 4 33 LEU 33 46 46 LEU LEU D . n D 4 34 GLY 34 47 47 GLY GLY D . n D 4 35 THR 35 48 48 THR THR D . n D 4 36 TYR 36 49 49 TYR TYR D . n D 4 37 TYR 37 50 50 TYR TYR D . n D 4 38 VAL 38 51 51 VAL VAL D . n D 4 39 LEU 39 52 52 LEU LEU D . n D 4 40 ASN 40 53 53 ASN ASN D . n D 4 41 ARG 41 54 54 ARG ARG D . n D 4 42 VAL 42 55 55 VAL VAL D . n D 4 43 TYR 43 56 56 TYR TYR D . n D 4 44 LEU 44 57 57 LEU LEU D . n D 4 45 ASN 45 58 58 ASN ASN D . n D 4 46 THR 46 59 59 THR THR D . n D 4 47 THR 47 60 60 THR THR D . n D 4 48 LEU 48 61 61 LEU LEU D . n D 4 49 LEU 49 62 62 LEU LEU D . n D 4 50 PHE 50 63 63 PHE PHE D . n D 4 51 THR 51 64 64 THR THR D . n D 4 52 GLY 52 65 65 GLY GLY D . n D 4 53 TYR 53 66 66 TYR TYR D . n D 4 54 PHE 54 67 67 PHE PHE D . n D 4 55 PRO 55 68 68 PRO PRO D . n D 4 56 LYS 56 69 69 LYS LYS D . n D 4 57 SER 57 70 70 SER SER D . n D 4 58 GLY 58 71 71 GLY GLY D . n D 4 59 ALA 59 72 72 ALA ALA D . n D 4 60 ASN 60 73 73 ASN ASN D . n D 4 61 PHE 61 74 74 PHE PHE D . n D 4 62 ARG 62 75 75 ARG ARG D . n D 4 63 ASP 63 76 76 ASP ASP D . n D 4 64 LEU 64 77 77 LEU LEU D . n D 4 65 ALA 65 78 78 ALA ALA D . n D 4 66 LEU 66 79 79 LEU LEU D . n D 4 67 LYS 67 80 80 LYS LYS D . n D 4 68 GLY 68 81 81 GLY GLY D . n D 4 69 SER 69 82 82 SER SER D . n D 4 70 ILE 70 83 83 ILE ILE D . n D 4 71 TYR 71 84 84 TYR TYR D . n D 4 72 LEU 72 85 85 LEU LEU D . n D 4 73 SER 73 86 86 SER SER D . n D 4 74 THR 74 87 87 THR THR D . n D 4 75 LEU 75 88 88 LEU LEU D . n D 4 76 TRP 76 89 89 TRP TRP D . n D 4 77 TYR 77 90 90 TYR TYR D . n D 4 78 LYS 78 91 91 LYS LYS D . n D 4 79 PRO 79 92 92 PRO PRO D . n D 4 80 PRO 80 93 93 PRO PRO D . n D 4 81 PHE 81 94 94 PHE PHE D . n D 4 82 LEU 82 95 95 LEU LEU D . n D 4 83 SER 83 96 96 SER SER D . n D 4 84 ASP 84 97 97 ASP ASP D . n D 4 85 PHE 85 98 98 PHE PHE D . n D 4 86 ASN 86 99 99 ASN ASN D . n D 4 87 ASN 87 100 100 ASN ASN D . n D 4 88 GLY 88 101 101 GLY GLY D . n D 4 89 ILE 89 102 102 ILE ILE D . n D 4 90 PHE 90 103 103 PHE PHE D . n D 4 91 SER 91 104 104 SER SER D . n D 4 92 LYS 92 105 105 LYS LYS D . n D 4 93 VAL 93 106 106 VAL VAL D . n D 4 94 LYS 94 107 107 LYS LYS D . n D 4 95 ASN 95 108 108 ASN ASN D . n D 4 96 THR 96 109 109 THR THR D . n D 4 97 LYS 97 110 110 LYS LYS D . n D 4 98 LEU 98 111 111 LEU LEU D . n D 4 99 TYR 99 112 112 TYR TYR D . n D 4 100 VAL 100 113 113 VAL VAL D . n D 4 101 ASN 101 114 114 ASN ASN D . n D 4 102 ASN 102 115 115 ASN ASN D . n D 4 103 THR 103 116 116 THR THR D . n D 4 104 LEU 104 117 117 LEU LEU D . n D 4 105 TYR 105 118 118 TYR TYR D . n D 4 106 SER 106 119 119 SER SER D . n D 4 107 GLU 107 120 120 GLU GLU D . n D 4 108 PHE 108 121 121 PHE PHE D . n D 4 109 SER 109 122 122 SER SER D . n D 4 110 THR 110 123 123 THR THR D . n D 4 111 ILE 111 124 124 ILE ILE D . n D 4 112 VAL 112 125 125 VAL VAL D . n D 4 113 ILE 113 126 126 ILE ILE D . n D 4 114 GLY 114 127 127 GLY GLY D . n D 4 115 SER 115 128 128 SER SER D . n D 4 116 VAL 116 129 129 VAL VAL D . n D 4 117 PHE 117 130 130 PHE PHE D . n D 4 118 VAL 118 131 131 VAL VAL D . n D 4 119 ASN 119 132 132 ASN ASN D . n D 4 120 THR 120 133 133 THR THR D . n D 4 121 SER 121 134 134 SER SER D . n D 4 122 TYR 122 135 135 TYR TYR D . n D 4 123 THR 123 136 136 THR THR D . n D 4 124 ILE 124 137 137 ILE ILE D . n D 4 125 VAL 125 138 138 VAL VAL D . n D 4 126 VAL 126 139 139 VAL VAL D . n D 4 127 GLN 127 140 140 GLN GLN D . n D 4 128 PRO 128 141 141 PRO PRO D . n D 4 129 HIS 129 142 142 HIS HIS D . n D 4 130 ASN 130 143 143 ASN ASN D . n D 4 131 GLY 131 144 144 GLY GLY D . n D 4 132 ILE 132 145 145 ILE ILE D . n D 4 133 LEU 133 146 146 LEU LEU D . n D 4 134 GLU 134 147 147 GLU GLU D . n D 4 135 ILE 135 148 148 ILE ILE D . n D 4 136 THR 136 149 149 THR THR D . n D 4 137 ALA 137 150 150 ALA ALA D . n D 4 138 CYS 138 151 151 CYS CYS D . n D 4 139 GLN 139 152 152 GLN GLN D . n D 4 140 TYR 140 153 153 TYR TYR D . n D 4 141 THR 141 154 154 THR THR D . n D 4 142 MET 142 155 155 MET MET D . n D 4 143 CYS 143 156 156 CYS CYS D . n D 4 144 GLU 144 157 157 GLU GLU D . n D 4 145 TYR 145 158 158 TYR TYR D . n D 4 146 PRO 146 159 159 PRO PRO D . n D 4 147 HIS 147 160 160 HIS HIS D . n D 4 148 THR 148 161 161 THR THR D . n D 4 149 VAL 149 162 162 VAL VAL D . n D 4 150 CYS 150 163 163 CYS CYS D . n D 4 151 LYS 151 164 164 LYS LYS D . n D 4 152 SER 152 165 165 SER SER D . n D 4 153 LYS 153 166 166 LYS LYS D . n D 4 154 GLY 154 167 167 GLY GLY D . n D 4 155 SER 155 168 168 SER SER D . n D 4 156 ILE 156 169 169 ILE ILE D . n D 4 157 ARG 157 170 170 ARG ARG D . n D 4 158 ASN 158 171 171 ASN ASN D . n D 4 159 GLU 159 172 172 GLU GLU D . n D 4 160 SER 160 173 173 SER SER D . n D 4 161 TRP 161 174 174 TRP TRP D . n D 4 162 HIS 162 175 175 HIS HIS D . n D 4 163 ILE 163 176 176 ILE ILE D . n D 4 164 ASP 164 177 177 ASP ASP D . n D 4 165 SER 165 178 178 SER SER D . n D 4 166 SER 166 179 179 SER SER D . n D 4 167 GLU 167 180 180 GLU GLU D . n D 4 168 PRO 168 181 181 PRO PRO D . n D 4 169 LEU 169 182 182 LEU LEU D . n D 4 170 CYS 170 183 183 CYS CYS D . n D 4 171 LEU 171 184 184 LEU LEU D . n D 4 172 PHE 172 185 185 PHE PHE D . n D 4 173 LYS 173 186 186 LYS LYS D . n D 4 174 LYS 174 187 187 LYS LYS D . n D 4 175 ASN 175 188 188 ASN ASN D . n D 4 176 PHE 176 189 189 PHE PHE D . n D 4 177 THR 177 190 190 THR THR D . n D 4 178 TYR 178 191 191 TYR TYR D . n D 4 179 ASN 179 192 192 ASN ASN D . n D 4 180 VAL 180 193 193 VAL VAL D . n D 4 181 SER 181 194 194 SER SER D . n D 4 182 ALA 182 195 195 ALA ALA D . n D 4 183 ASP 183 196 196 ASP ASP D . n D 4 184 TRP 184 197 197 TRP TRP D . n D 4 185 LEU 185 198 198 LEU LEU D . n D 4 186 TYR 186 199 199 TYR TYR D . n D 4 187 PHE 187 200 200 PHE PHE D . n D 4 188 HIS 188 201 201 HIS HIS D . n D 4 189 PHE 189 202 202 PHE PHE D . n D 4 190 TYR 190 203 203 TYR TYR D . n D 4 191 GLN 191 204 204 GLN GLN D . n D 4 192 GLU 192 205 205 GLU GLU D . n D 4 193 ARG 193 206 206 ARG ARG D . n D 4 194 GLY 194 207 207 GLY GLY D . n D 4 195 VAL 195 208 208 VAL VAL D . n D 4 196 PHE 196 209 209 PHE PHE D . n D 4 197 TYR 197 210 210 TYR TYR D . n D 4 198 ALA 198 211 211 ALA ALA D . n D 4 199 TYR 199 212 212 TYR TYR D . n D 4 200 TYR 200 213 213 TYR TYR D . n D 4 201 ALA 201 214 214 ALA ALA D . n D 4 202 ASP 202 215 215 ASP ASP D . n D 4 203 VAL 203 216 216 VAL VAL D . n D 4 204 GLY 204 217 217 GLY GLY D . n D 4 205 MET 205 218 218 MET MET D . n D 4 206 PRO 206 219 219 PRO PRO D . n D 4 207 THR 207 220 220 THR THR D . n D 4 208 THR 208 221 221 THR THR D . n D 4 209 PHE 209 222 222 PHE PHE D . n D 4 210 LEU 210 223 223 LEU LEU D . n D 4 211 PHE 211 224 224 PHE PHE D . n D 4 212 SER 212 225 225 SER SER D . n D 4 213 LEU 213 226 226 LEU LEU D . n D 4 214 TYR 214 227 227 TYR TYR D . n D 4 215 LEU 215 228 228 LEU LEU D . n D 4 216 GLY 216 229 229 GLY GLY D . n D 4 217 THR 217 230 230 THR THR D . n D 4 218 ILE 218 231 231 ILE ILE D . n D 4 219 LEU 219 232 232 LEU LEU D . n D 4 220 SER 220 233 233 SER SER D . n D 4 221 HIS 221 234 234 HIS HIS D . n D 4 222 TYR 222 235 235 TYR TYR D . n D 4 223 TYR 223 236 236 TYR TYR D . n D 4 224 VAL 224 237 237 VAL VAL D . n D 4 225 MET 225 238 238 MET MET D . n D 4 226 PRO 226 239 239 PRO PRO D . n D 4 227 LEU 227 240 240 LEU LEU D . n D 4 228 THR 228 241 241 THR THR D . n D 4 229 CYS 229 242 242 CYS CYS D . n D 4 230 ASN 230 243 243 ASN ASN D . n D 4 231 ALA 231 244 244 ALA ALA D . n D 4 232 ILE 232 245 245 ILE ILE D . n D 4 233 SER 233 246 246 SER SER D . n D 4 234 SER 234 247 247 SER SER D . n D 4 235 ASN 235 248 248 ASN ASN D . n D 4 236 THR 236 249 249 THR THR D . n D 4 237 ASP 237 250 250 ASP ASP D . n D 4 238 ASN 238 251 251 ASN ASN D . n D 4 239 GLU 239 252 252 GLU GLU D . n D 4 240 THR 240 253 253 THR THR D . n D 4 241 LEU 241 254 254 LEU LEU D . n D 4 242 GLU 242 255 255 GLU GLU D . n D 4 243 TYR 243 256 256 TYR TYR D . n D 4 244 TRP 244 257 257 TRP TRP D . n D 4 245 VAL 245 258 258 VAL VAL D . n D 4 246 THR 246 259 259 THR THR D . n D 4 247 PRO 247 260 260 PRO PRO D . n D 4 248 LEU 248 261 261 LEU LEU D . n D 4 249 SER 249 262 262 SER SER D . n D 4 250 ARG 250 263 263 ARG ARG D . n D 4 251 ARG 251 264 264 ARG ARG D . n D 4 252 GLN 252 265 265 GLN GLN D . n D 4 253 TYR 253 266 266 TYR TYR D . n D 4 254 LEU 254 267 267 LEU LEU D . n D 4 255 LEU 255 268 268 LEU LEU D . n D 4 256 ASN 256 269 269 ASN ASN D . n D 4 257 PHE 257 270 270 PHE PHE D . n D 4 258 ASP 258 271 271 ASP ASP D . n D 4 259 GLU 259 272 272 GLU GLU D . n D 4 260 HIS 260 273 273 HIS HIS D . n D 4 261 GLY 261 274 274 GLY GLY D . n D 4 262 VAL 262 275 275 VAL VAL D . n D 4 263 ILE 263 276 276 ILE ILE D . n D 4 264 THR 264 277 277 THR THR D . n D 4 265 ASN 265 278 278 ASN ASN D . n D 4 266 ALA 266 279 279 ALA ALA D . n D 4 267 VAL 267 280 280 VAL VAL D . n D 4 268 ASP 268 281 281 ASP ASP D . n D 4 269 CYS 269 282 282 CYS CYS D . n D 4 270 SER 270 283 283 SER SER D . n D 4 271 SER 271 284 284 SER SER D . n D 4 272 SER 272 285 285 SER SER D . n D 4 273 PHE 273 286 286 PHE PHE D . n D 4 274 LEU 274 287 287 LEU LEU D . n D 4 275 SER 275 288 288 SER SER D . n D 4 276 GLU 276 289 289 GLU GLU D . n D 4 277 ILE 277 290 290 ILE ILE D . n D 4 278 GLN 278 291 291 GLN GLN D . n D 4 279 CYS 279 292 292 CYS CYS D . n D 4 280 LYS 280 293 293 LYS LYS D . n D 4 281 THR 281 294 294 THR THR D . n D 4 282 GLN 282 295 295 GLN GLN D . n D 4 283 SER 283 296 296 SER SER D . n D 4 284 PHE 284 297 297 PHE PHE D . n D 4 285 ALA 285 298 298 ALA ALA D . n D 4 286 PRO 286 299 299 PRO PRO D . n D 4 287 ASN 287 300 300 ASN ASN D . n D 4 288 THR 288 301 301 THR THR D . n D 4 289 GLY 289 302 302 GLY GLY D . n D 4 290 VAL 290 303 303 VAL VAL D . n D 4 291 TYR 291 304 304 TYR TYR D . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero E 5 NAG 1 E NAG 1 C NAG 615 n E 5 NAG 2 E NAG 2 C NAG 616 n E 5 FUC 3 E FUC 3 C FUC 617 n F 6 NAG 1 F NAG 1 D NAG 306 n F 6 NAG 2 F NAG 2 D NAG 307 n F 6 BMA 3 F BMA 3 D BMA 308 n G 6 NAG 1 G NAG 1 D NAG 310 n G 6 NAG 2 G NAG 2 D NAG 311 n G 6 BMA 3 G BMA 3 D BMA 312 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code H 7 NAG 1 701 611 NAG NAG C . I 7 NAG 1 702 618 NAG NAG C . J 7 NAG 1 703 619 NAG NAG C . K 7 NAG 1 401 305 NAG NAG D . L 7 NAG 1 402 309 NAG NAG D . M 7 NAG 1 403 313 NAG NAG D . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9YYX _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9YYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9YYX _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9YYX _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.07 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _struct.entry_id 9YYX _struct.title 'Cryo-EM structure of HKU1 spike with antibody HKU1-11 (local refinement of CTD, NTD, and Fab variable domain)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9YYX _struct_keywords.text 'HKU1, Spike, Antibody, Immune system, Immune system-Viral protein complex' _struct_keywords.pdbx_keywords 'Immune system/Viral protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 7 ? J N N 7 ? K N N 7 ? L N N 7 ? M N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9YYX 9YYX ? 1 ? 1 2 PDB 9YYX 9YYX ? 2 ? 1 3 UNP SPIKE_CVHN5 Q0ZME7 ? 3 ;CDIDNWLNNVSVPSPLNWERRIFSNCNFNLSTLLRLVHVDSFSCNNLDKSKIFGSCFNSITVDKFAIPNRRRDDLQLGSS GFLQSSNYKIDISSSSCQLYYSLPLVNVTINNFNPSSWNRRYGFGSFNLSSYDVVYSDHCFSVNSDFCPCADPSVVNSCA KSKPPSAICPAGTKYRHCDLDTTLYVKNWCRCSCLPDPISTYSPNTCPQKKVVVGIGEHCPGLGINEEKCGTQLNHSSCF CSPDAFLGWSFDSCISNNRCNIFSNFIFNGINSGTTCSNDLLYS ; 327 4 UNP SPIKE_CVHN5 Q0ZME7 ? 4 ;VIGDFNCTNSFINDYNKTIPRISEDVVDVSLGLGTYYVLNRVYLNTTLLFTGYFPKSGANFRDLALKGSIYLSTLWYKPP FLSDFNNGIFSKVKNTKLYVNNTLYSEFSTIVIGSVFVNTSYTIVVQPHNGILEITACQYTMCEYPHTVCKSKGSIRNES WHIDSSEPLCLFKKNFTYNVSADWLYFHFYQERGVFYAYYADVGMPTTFLFSLYLGTILSHYYVMPLTCNAISSNTDNET LEYWVTPLSRRQYLLNFDEHGVITNAVDCSSSFLSEIQCKTQSFAPNTGVY ; 14 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9YYX A 1 ? 126 ? 9YYX 1 ? 113 ? 1 113 2 2 9YYX B 1 ? 110 A 9YYX 1 ? 106 ? 1 106 3 3 9YYX C 1 ? 284 ? Q0ZME7 327 ? 610 ? 327 610 4 4 9YYX D 1 ? 291 ? Q0ZME7 14 ? 304 ? 14 304 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 61 ? ARG A 64 ? PRO A 61 ARG A 64 5 ? 4 HELX_P HELX_P2 AA2 THR A 86 ? THR A 90 ? THR A 83 THR A 87 5 ? 5 HELX_P HELX_P3 AA3 ARG B 80 ? GLU B 84 ? ARG B 79 GLU B 83 5 ? 5 HELX_P HELX_P4 AA4 THR C 32 ? VAL C 37 ? THR C 358 VAL C 363 1 ? 6 HELX_P HELX_P5 AA5 SER C 50 ? GLY C 54 ? SER C 376 GLY C 380 5 ? 5 HELX_P HELX_P6 AA6 PRO C 68 ? LEU C 75 ? PRO C 394 LEU C 401 5 ? 8 HELX_P HELX_P7 AA7 GLY C 81 ? SER C 86 ? GLY C 407 SER C 412 1 ? 6 HELX_P HELX_P8 AA8 SER C 116 ? TYR C 122 ? SER C 442 TYR C 448 1 ? 7 HELX_P HELX_P9 AA9 ASP C 152 ? ASN C 157 ? ASP C 478 ASN C 483 1 ? 6 HELX_P HELX_P10 AB1 GLU C 227 ? CYS C 230 ? GLU C 553 CYS C 556 5 ? 4 HELX_P HELX_P11 AB2 VAL D 29 ? LEU D 33 ? VAL D 42 LEU D 46 5 ? 5 HELX_P HELX_P12 AB3 LEU D 75 ? LYS D 78 ? LEU D 88 LYS D 91 5 ? 4 HELX_P HELX_P13 AB4 SER D 272 ? GLN D 282 ? SER D 285 GLN D 295 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 22 A CYS 92 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf2 disulf ? ? A CYS 100 SG ? ? ? 1_555 A CYS 104 SG ? A A CYS 97 A CYS 100 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 89 SG ? ? B CYS 23 B CYS 88 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? C CYS 1 SG ? ? ? 1_555 C CYS 26 SG ? ? C CYS 327 C CYS 352 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? C CYS 44 SG ? ? ? 1_555 C CYS 97 SG ? ? C CYS 370 C CYS 423 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf6 disulf ? ? C CYS 56 SG ? ? ? 1_555 C CYS 277 SG ? ? C CYS 382 C CYS 603 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf7 disulf ? ? C CYS 140 SG ? ? ? 1_555 C CYS 220 SG ? ? C CYS 466 C CYS 546 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf8 disulf ? ? C CYS 148 SG ? ? ? 1_555 C CYS 169 SG ? ? C CYS 474 C CYS 495 1_555 ? ? ? ? ? ? ? 2.019 ? ? disulf9 disulf ? ? C CYS 150 SG ? ? ? 1_555 C CYS 239 SG ? ? C CYS 476 C CYS 565 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf10 disulf ? ? C CYS 159 SG ? ? ? 1_555 C CYS 190 SG ? ? C CYS 485 C CYS 516 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf11 disulf ? ? C CYS 178 SG ? ? ? 1_555 C CYS 192 SG ? ? C CYS 504 C CYS 518 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf12 disulf ? ? C CYS 194 SG ? ? ? 1_555 C CYS 207 SG ? ? C CYS 520 C CYS 533 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf13 disulf ? ? C CYS 230 SG ? ? ? 1_555 C CYS 241 SG ? ? C CYS 556 C CYS 567 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf14 disulf ? ? C CYS 254 SG ? ? ? 1_555 C CYS 260 SG ? ? C CYS 580 C CYS 586 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf15 disulf ? ? D CYS 7 SG ? ? ? 1_555 D CYS 143 SG ? ? D CYS 20 D CYS 156 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf16 disulf ? ? D CYS 138 SG ? ? ? 1_555 D CYS 170 SG ? ? D CYS 151 D CYS 183 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf17 disulf ? ? D CYS 150 SG ? ? ? 1_555 D CYS 229 SG ? ? D CYS 163 D CYS 242 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf18 disulf ? ? D CYS 269 SG ? ? ? 1_555 D CYS 279 SG ? ? D CYS 282 D CYS 292 1_555 ? ? ? ? ? ? ? 2.029 ? ? covale1 covale one ? C ASN 9 ND2 ? ? ? 1_555 H NAG . C1 ? ? C ASN 335 C NAG 701 1_555 ? ? ? ? ? ? ? 1.437 ? N-Glycosylation covale2 covale one ? C ASN 29 ND2 ? ? ? 1_555 I NAG . C1 ? ? C ASN 355 C NAG 702 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale3 covale one ? C ASN 107 ND2 ? ? ? 1_555 J NAG . C1 ? ? C ASN 433 C NAG 703 1_555 ? ? ? ? ? ? ? 1.448 ? N-Glycosylation covale4 covale one ? C ASN 128 ND2 ? ? ? 1_555 E NAG . C1 ? ? C ASN 454 E NAG 1 1_555 ? ? ? ? ? ? ? 1.426 ? N-Glycosylation covale5 covale one ? D ASN 6 ND2 ? ? ? 1_555 K NAG . C1 ? ? D ASN 19 D NAG 401 1_555 ? ? ? ? ? ? ? 1.399 ? N-Glycosylation covale6 covale one ? D ASN 119 ND2 ? ? ? 1_555 F NAG . C1 ? ? D ASN 132 F NAG 1 1_555 ? ? ? ? ? ? ? 1.405 ? N-Glycosylation covale7 covale one ? D ASN 158 ND2 ? ? ? 1_555 L NAG . C1 ? ? D ASN 171 D NAG 402 1_555 ? ? ? ? ? ? ? 1.437 ? N-Glycosylation covale8 covale one ? D ASN 175 ND2 ? ? ? 1_555 G NAG . C1 ? ? D ASN 188 G NAG 1 1_555 ? ? ? ? ? ? ? 1.426 ? N-Glycosylation covale9 covale one ? D ASN 179 ND2 ? ? ? 1_555 M NAG . C1 ? ? D ASN 192 D NAG 403 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale10 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.393 ? ? covale11 covale both ? E NAG . O6 ? ? ? 1_555 E FUC . C1 ? ? E NAG 1 E FUC 3 1_555 ? ? ? ? ? ? ? 1.402 ? ? covale12 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? F NAG 1 F NAG 2 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale13 covale both ? F NAG . O4 ? ? ? 1_555 F BMA . C1 ? ? F NAG 2 F BMA 3 1_555 ? ? ? ? ? ? ? 1.445 ? ? covale14 covale both ? G NAG . O4 ? ? ? 1_555 G NAG . C1 ? ? G NAG 1 G NAG 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale15 covale both ? G NAG . O4 ? ? ? 1_555 G BMA . C1 ? ? G NAG 2 G BMA 3 1_555 ? ? ? ? ? ? ? 1.441 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG E . ? ASN C 128 ? NAG E 1 ? 1_555 ASN C 454 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG F . ? ASN D 119 ? NAG F 1 ? 1_555 ASN D 132 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG G . ? ASN D 175 ? NAG G 1 ? 1_555 ASN D 188 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 NAG H . ? ASN C 9 ? NAG C 701 ? 1_555 ASN C 335 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 5 NAG I . ? ASN C 29 ? NAG C 702 ? 1_555 ASN C 355 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 6 NAG J . ? ASN C 107 ? NAG C 703 ? 1_555 ASN C 433 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 7 NAG K . ? ASN D 6 ? NAG D 401 ? 1_555 ASN D 19 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 8 NAG L . ? ASN D 158 ? NAG D 402 ? 1_555 ASN D 171 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 9 NAG M . ? ASN D 179 ? NAG D 403 ? 1_555 ASN D 192 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 10 CYS A 22 ? CYS A 95 ? CYS A 22 ? 1_555 CYS A 92 ? 1_555 SG SG . . . None 'Disulfide bridge' 11 CYS A 100 ? CYS A 104 ? CYS A 97 ? 1_555 CYS A 100 A 1_555 SG SG . . . None 'Disulfide bridge' 12 CYS B 22 ? CYS B 89 ? CYS B 23 ? 1_555 CYS B 88 ? 1_555 SG SG . . . None 'Disulfide bridge' 13 CYS C 1 ? CYS C 26 ? CYS C 327 ? 1_555 CYS C 352 ? 1_555 SG SG . . . None 'Disulfide bridge' 14 CYS C 44 ? CYS C 97 ? CYS C 370 ? 1_555 CYS C 423 ? 1_555 SG SG . . . None 'Disulfide bridge' 15 CYS C 56 ? CYS C 277 ? CYS C 382 ? 1_555 CYS C 603 ? 1_555 SG SG . . . None 'Disulfide bridge' 16 CYS C 140 ? CYS C 220 ? CYS C 466 ? 1_555 CYS C 546 ? 1_555 SG SG . . . None 'Disulfide bridge' 17 CYS C 148 ? CYS C 169 ? CYS C 474 ? 1_555 CYS C 495 ? 1_555 SG SG . . . None 'Disulfide bridge' 18 CYS C 150 ? CYS C 239 ? CYS C 476 ? 1_555 CYS C 565 ? 1_555 SG SG . . . None 'Disulfide bridge' 19 CYS C 159 ? CYS C 190 ? CYS C 485 ? 1_555 CYS C 516 ? 1_555 SG SG . . . None 'Disulfide bridge' 20 CYS C 178 ? CYS C 192 ? CYS C 504 ? 1_555 CYS C 518 ? 1_555 SG SG . . . None 'Disulfide bridge' 21 CYS C 194 ? CYS C 207 ? CYS C 520 ? 1_555 CYS C 533 ? 1_555 SG SG . . . None 'Disulfide bridge' 22 CYS C 230 ? CYS C 241 ? CYS C 556 ? 1_555 CYS C 567 ? 1_555 SG SG . . . None 'Disulfide bridge' 23 CYS C 254 ? CYS C 260 ? CYS C 580 ? 1_555 CYS C 586 ? 1_555 SG SG . . . None 'Disulfide bridge' 24 CYS D 7 ? CYS D 143 ? CYS D 20 ? 1_555 CYS D 156 ? 1_555 SG SG . . . None 'Disulfide bridge' 25 CYS D 138 ? CYS D 170 ? CYS D 151 ? 1_555 CYS D 183 ? 1_555 SG SG . . . None 'Disulfide bridge' 26 CYS D 150 ? CYS D 229 ? CYS D 163 ? 1_555 CYS D 242 ? 1_555 SG SG . . . None 'Disulfide bridge' 27 CYS D 269 ? CYS D 279 ? CYS D 282 ? 1_555 CYS D 292 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 114 A . ? ASP 101 A PRO 115 A ? PRO 102 A 1 -4.41 2 LEU 195 C . ? LEU 521 C PRO 196 C ? PRO 522 C 1 1.71 3 PRO 79 D . ? PRO 92 D PRO 80 D ? PRO 93 D 1 13.35 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 5 ? AA5 ? 4 ? AA6 ? 3 ? AA7 ? 2 ? AA8 ? 5 ? AA9 ? 4 ? AB1 ? 2 ? AB2 ? 2 ? AB3 ? 4 ? AB4 ? 2 ? AB5 ? 2 ? AB6 ? 6 ? AB7 ? 3 ? AB8 ? 4 ? AB9 ? 6 ? AC1 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA8 4 5 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB4 1 2 ? anti-parallel AB5 1 2 ? parallel AB6 1 2 ? anti-parallel AB6 2 3 ? anti-parallel AB6 3 4 ? anti-parallel AB6 4 5 ? anti-parallel AB6 5 6 ? anti-parallel AB7 1 2 ? anti-parallel AB7 2 3 ? anti-parallel AB8 1 2 ? parallel AB8 2 3 ? parallel AB8 3 4 ? anti-parallel AB9 1 2 ? anti-parallel AB9 2 3 ? anti-parallel AB9 3 4 ? anti-parallel AB9 4 5 ? anti-parallel AB9 5 6 ? anti-parallel AC1 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 3 ? SER A 7 ? GLN A 3 SER A 7 AA1 2 LEU A 18 ? SER A 25 ? LEU A 18 SER A 25 AA1 3 GLN A 77 ? LEU A 82 ? GLN A 77 LEU A 82 AA1 4 VAL A 67 ? ASP A 72 ? VAL A 67 ASP A 72 AA2 1 LEU A 11 ? VAL A 12 ? LEU A 11 VAL A 12 AA2 2 THR A 120 ? VAL A 124 ? THR A 107 VAL A 111 AA2 3 ALA A 91 ? SER A 99 ? ALA A 88 SER A 96 AA2 4 PHE A 33 ? GLN A 39 ? PHE A 33 GLN A 39 AA2 5 GLU A 46 ? ILE A 51 ? GLU A 46 ILE A 51 AA2 6 THR A 57 ? TYR A 59 ? THR A 57 TYR A 59 AA3 1 LEU A 11 ? VAL A 12 ? LEU A 11 VAL A 12 AA3 2 THR A 120 ? VAL A 124 ? THR A 107 VAL A 111 AA3 3 ALA A 91 ? SER A 99 ? ALA A 88 SER A 96 AA3 4 TRP A 112 I TRP A 116 ? TRP A 100 TRP A 103 AA4 1 SER B 9 ? GLY B 12 ? SER B 9 GLY B 13 AA4 2 THR B 105 ? VAL B 109 ? THR B 102 VAL B 106 AA4 3 ALA B 85 ? ASP B 93 ? ALA B 84 ASP B 92 AA4 4 VAL B 34 ? GLN B 39 ? VAL B 33 GLN B 38 AA4 5 LYS B 46 ? ILE B 49 ? LYS B 45 ILE B 48 AA5 1 SER B 9 ? GLY B 12 ? SER B 9 GLY B 13 AA5 2 THR B 105 ? VAL B 109 ? THR B 102 VAL B 106 AA5 3 ALA B 85 ? ASP B 93 ? ALA B 84 ASP B 92 AA5 4 GLY B 98 B PHE B 101 ? GLY B 95 PHE B 98 AA6 1 ARG B 17 ? SER B 23 ? ARG B 18 SER B 24 AA6 2 SER B 71 ? SER B 77 ? SER B 70 SER B 76 AA6 3 PHE B 63 ? SER B 68 ? PHE B 62 SER B 67 AA7 1 VAL C 12 ? PRO C 13 ? VAL C 338 PRO C 339 AA7 2 ILE C 110 ? ASN C 111 ? ILE C 436 ASN C 437 AA8 1 GLU C 19 ? PHE C 23 ? GLU C 345 PHE C 349 AA8 2 SER C 59 ? ALA C 66 ? SER C 385 ALA C 392 AA8 3 ARG C 259 ? ASN C 269 ? ARG C 585 ASN C 595 AA8 4 SER C 96 ? PRO C 104 ? SER C 422 PRO C 430 AA8 5 VAL C 39 ? ASN C 45 ? VAL C 365 ASN C 371 AA9 1 GLU C 19 ? PHE C 23 ? GLU C 345 PHE C 349 AA9 2 SER C 59 ? ALA C 66 ? SER C 385 ALA C 392 AA9 3 ARG C 259 ? ASN C 269 ? ARG C 585 ASN C 595 AA9 4 ILE C 255 ? SER C 256 ? ILE C 581 SER C 582 AB1 1 CYS C 56 ? PHE C 57 ? CYS C 382 PHE C 383 AB1 2 THR C 276 ? CYS C 277 ? THR C 602 CYS C 603 AB2 1 ASP C 133 ? SER C 137 ? ASP C 459 SER C 463 AB2 2 TRP C 249 ? SER C 253 ? TRP C 575 SER C 579 AB3 1 LYS C 210 ? LYS C 211 ? LYS C 536 LYS C 537 AB3 2 CYS C 140 ? SER C 142 ? CYS C 466 SER C 468 AB3 3 GLY C 222 ? ILE C 225 ? GLY C 548 ILE C 551 AB3 4 PHE C 246 ? LEU C 247 ? PHE C 572 LEU C 573 AB4 1 ASP C 179 ? ASP C 181 ? ASP C 505 ASP C 507 AB4 2 ASN C 188 ? ARG C 191 ? ASN C 514 ARG C 517 AB5 1 ILE D 12 ? ASN D 13 ? ILE D 25 ASN D 26 AB5 2 LEU D 72 ? SER D 73 ? LEU D 85 SER D 86 AB6 1 THR D 46 ? PRO D 55 ? THR D 59 PRO D 68 AB6 2 TYR D 243 ? PHE D 257 ? TYR D 256 PHE D 270 AB6 3 GLY D 88 ? LYS D 94 ? GLY D 101 LYS D 107 AB6 4 TRP D 184 ? GLU D 192 ? TRP D 197 GLU D 205 AB6 5 VAL D 195 ? ALA D 201 ? VAL D 208 ALA D 214 AB6 6 THR D 208 ? TYR D 214 ? THR D 221 TYR D 227 AB7 1 ARG D 62 ? ASP D 63 ? ARG D 75 ASP D 76 AB7 2 TYR D 243 ? PHE D 257 ? TYR D 256 PHE D 270 AB7 3 ILE D 263 ? ASP D 268 ? ILE D 276 ASP D 281 AB8 1 LYS D 67 ? GLY D 68 ? LYS D 80 GLY D 81 AB8 2 LEU D 227 ? THR D 228 ? LEU D 240 THR D 241 AB8 3 MET D 142 ? VAL D 149 ? MET D 155 VAL D 162 AB8 4 SER D 160 ? HIS D 162 ? SER D 173 HIS D 175 AB9 1 LEU D 82 ? ASP D 84 ? LEU D 95 ASP D 97 AB9 2 HIS D 221 ? VAL D 224 ? HIS D 234 VAL D 237 AB9 3 ILE D 111 ? GLY D 114 ? ILE D 124 GLY D 127 AB9 4 THR D 123 ? PRO D 128 ? THR D 136 PRO D 141 AB9 5 ILE D 132 ? CYS D 138 ? ILE D 145 CYS D 151 AB9 6 CYS D 170 ? THR D 177 ? CYS D 183 THR D 190 AC1 1 THR D 96 ? VAL D 100 ? THR D 109 VAL D 113 AC1 2 THR D 103 ? GLU D 107 ? THR D 116 GLU D 120 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 5 ? N GLN A 5 O THR A 23 ? O THR A 23 AA1 2 3 N CYS A 22 ? N CYS A 22 O PHE A 78 ? O PHE A 78 AA1 3 4 O SER A 79 ? O SER A 79 N SER A 70 ? N SER A 70 AA2 1 2 N VAL A 12 ? N VAL A 12 O THR A 123 ? O THR A 110 AA2 2 3 O VAL A 122 ? O VAL A 109 N ALA A 91 ? N ALA A 88 AA2 3 4 O TYR A 94 ? O TYR A 91 N ILE A 37 ? N ILE A 37 AA2 4 5 N ARG A 38 ? N ARG A 38 O GLU A 46 ? O GLU A 46 AA2 5 6 N TYR A 50 ? N TYR A 50 O ASN A 58 ? O ASN A 58 AA3 1 2 N VAL A 12 ? N VAL A 12 O THR A 123 ? O THR A 110 AA3 2 3 O VAL A 122 ? O VAL A 109 N ALA A 91 ? N ALA A 88 AA3 3 4 N SER A 99 ? N SER A 96 O TRP A 112 I O TRP A 100 AA4 1 2 N ALA B 10 ? N ALA B 11 O THR B 108 ? O THR B 105 AA4 2 3 O VAL B 107 ? O VAL B 104 N ALA B 85 ? N ALA B 84 AA4 3 4 O ALA B 90 ? O ALA B 89 N TYR B 35 ? N TYR B 34 AA4 4 5 N TRP B 36 ? N TRP B 35 O ILE B 49 ? O ILE B 48 AA5 1 2 N ALA B 10 ? N ALA B 11 O THR B 108 ? O THR B 105 AA5 2 3 O VAL B 107 ? O VAL B 104 N ALA B 85 ? N ALA B 84 AA5 3 4 N ALA B 91 ? N ALA B 90 O VAL B 100 ? O VAL B 97 AA6 1 2 N VAL B 18 ? N VAL B 19 O ILE B 76 ? O ILE B 75 AA6 2 3 O SER B 71 ? O SER B 70 N SER B 68 ? N SER B 67 AA7 1 2 N VAL C 12 ? N VAL C 338 O ASN C 111 ? O ASN C 437 AA8 1 2 N ARG C 21 ? N ARG C 347 O VAL C 62 ? O VAL C 388 AA8 2 3 N PHE C 65 ? N PHE C 391 O PHE C 263 ? O PHE C 589 AA8 3 4 O SER C 264 ? O SER C 590 N LEU C 99 ? N LEU C 425 AA8 4 5 O SER C 96 ? O SER C 422 N ASN C 45 ? N ASN C 371 AA9 1 2 N ARG C 21 ? N ARG C 347 O VAL C 62 ? O VAL C 388 AA9 2 3 N PHE C 65 ? N PHE C 391 O PHE C 263 ? O PHE C 589 AA9 3 4 O ARG C 259 ? O ARG C 585 N SER C 256 ? N SER C 582 AB1 1 2 N PHE C 57 ? N PHE C 383 O THR C 276 ? O THR C 602 AB2 1 2 N TYR C 136 ? N TYR C 462 O SER C 250 ? O SER C 576 AB3 1 2 O LYS C 210 ? O LYS C 536 N SER C 142 ? N SER C 468 AB3 2 3 N PHE C 141 ? N PHE C 467 O GLY C 222 ? O GLY C 548 AB3 3 4 N GLY C 224 ? N GLY C 550 O LEU C 247 ? O LEU C 573 AB4 1 2 N ASP C 181 ? N ASP C 507 O ASN C 188 ? O ASN C 514 AB5 1 2 N ASN D 13 ? N ASN D 26 O LEU D 72 ? O LEU D 85 AB6 1 2 N PHE D 50 ? N PHE D 63 O TYR D 253 ? O TYR D 266 AB6 2 3 O TRP D 244 ? O TRP D 257 N LYS D 92 ? N LYS D 105 AB6 3 4 N VAL D 93 ? N VAL D 106 O LEU D 185 ? O LEU D 198 AB6 4 5 N TYR D 190 ? N TYR D 203 O TYR D 197 ? O TYR D 210 AB6 5 6 N PHE D 196 ? N PHE D 209 O LEU D 213 ? O LEU D 226 AB7 1 2 N ARG D 62 ? N ARG D 75 O VAL D 245 ? O VAL D 258 AB7 2 3 N ASN D 256 ? N ASN D 269 O THR D 264 ? O THR D 277 AB8 1 2 N GLY D 68 ? N GLY D 81 O LEU D 227 ? O LEU D 240 AB8 2 3 O THR D 228 ? O THR D 241 N THR D 148 ? N THR D 161 AB8 3 4 N HIS D 147 ? N HIS D 160 O SER D 160 ? O SER D 173 AB9 1 2 N SER D 83 ? N SER D 96 O TYR D 222 ? O TYR D 235 AB9 2 3 O HIS D 221 ? O HIS D 234 N GLY D 114 ? N GLY D 127 AB9 3 4 N ILE D 113 ? N ILE D 126 O ILE D 124 ? O ILE D 137 AB9 4 5 N GLN D 127 ? N GLN D 140 O GLU D 134 ? O GLU D 147 AB9 5 6 N ILE D 135 ? N ILE D 148 O LYS D 174 ? O LYS D 187 AC1 1 2 N LEU D 98 ? N LEU D 111 O TYR D 105 ? O TYR D 118 # _pdbx_entry_details.entry_id 9YYX _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 D ASN 132 ? ? O5 F NAG 1 ? ? 2.17 2 1 ND2 D ASN 19 ? ? O5 D NAG 401 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 18 ? ? CB A LEU 18 ? ? CG A LEU 18 ? ? 129.89 115.30 14.59 2.30 N 2 1 CA C CYS 327 ? ? CB C CYS 327 ? ? SG C CYS 327 ? ? 123.28 114.20 9.08 1.10 N 3 1 CA C CYS 352 ? ? CB C CYS 352 ? ? SG C CYS 352 ? ? 121.73 114.20 7.53 1.10 N 4 1 CB C ASN 454 ? ? CA C ASN 454 ? ? C C ASN 454 ? ? 122.49 110.40 12.09 2.00 N 5 1 CB C ASP 478 ? ? CG C ASP 478 ? ? OD1 C ASP 478 ? ? 124.01 118.30 5.71 0.90 N 6 1 CA D CYS 163 ? ? CB D CYS 163 ? ? SG D CYS 163 ? ? 125.33 114.20 11.13 1.10 N 7 1 CB D ASP 271 ? ? CG D ASP 271 ? ? OD1 D ASP 271 ? ? 123.74 118.30 5.44 0.90 N 8 1 CB D ASP 281 ? ? CG D ASP 281 ? ? OD1 D ASP 281 ? ? 123.78 118.30 5.48 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 15 ? ? 73.03 -3.49 2 1 ASN B 27 B ? -101.04 -63.81 3 1 ASN B 51 ? ? 73.34 -26.92 4 1 THR B 52 ? ? -141.13 -17.96 5 1 ASP C 328 ? ? 55.84 -97.29 6 1 LEU C 333 ? ? 87.14 -21.34 7 1 LEU C 356 ? ? 69.62 -13.63 8 1 ASN C 413 ? ? -120.92 -61.78 9 1 LYS C 487 ? ? 70.33 -24.45 10 1 SER C 488 ? ? -161.65 93.04 11 1 SER C 519 ? ? 73.57 -8.84 12 1 ASP C 570 ? ? 73.77 -6.55 13 1 ASN C 605 ? ? -141.06 33.30 14 1 ILE D 15 ? ? -105.16 -62.38 15 1 ASN D 19 ? ? -69.01 91.07 16 1 TYR D 28 ? ? 73.72 -14.90 17 1 LYS D 30 ? ? 64.48 158.02 18 1 LEU D 44 ? ? 70.16 -0.46 19 1 LEU D 52 ? ? -81.07 -78.18 20 1 ASN D 53 ? ? -109.97 68.64 21 1 LEU D 57 ? ? -92.49 -155.05 22 1 ASN D 99 ? ? -94.73 -69.87 23 1 HIS D 142 ? ? -140.37 50.29 24 1 ASN D 248 ? ? 72.10 -24.56 25 1 THR D 249 ? ? -107.76 77.03 26 1 GLU D 252 ? ? 64.59 171.38 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9YYX _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9YYX _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.07 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 57651 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'HKU1 spike with antibody HKU1-11' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3, 4' # _em_imaging.entry_id 9YYX _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS GLACIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 700 _em_imaging.nominal_defocus_max 1700 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9YYX _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9YYX _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id C _pdbx_unobs_or_zero_occ_residues.auth_comp_id TYR _pdbx_unobs_or_zero_occ_residues.auth_seq_id 511 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id C _pdbx_unobs_or_zero_occ_residues.label_comp_id TYR _pdbx_unobs_or_zero_occ_residues.label_seq_id 185 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 FUC C1 C N R 112 FUC C2 C N S 113 FUC C3 C N R 114 FUC C4 C N S 115 FUC C5 C N S 116 FUC C6 C N N 117 FUC O1 O N N 118 FUC O2 O N N 119 FUC O3 O N N 120 FUC O4 O N N 121 FUC O5 O N N 122 FUC H1 H N N 123 FUC H2 H N N 124 FUC H3 H N N 125 FUC H4 H N N 126 FUC H5 H N N 127 FUC H61 H N N 128 FUC H62 H N N 129 FUC H63 H N N 130 FUC HO1 H N N 131 FUC HO2 H N N 132 FUC HO3 H N N 133 FUC HO4 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 ILE N N N N 205 ILE CA C N S 206 ILE C C N N 207 ILE O O N N 208 ILE CB C N S 209 ILE CG1 C N N 210 ILE CG2 C N N 211 ILE CD1 C N N 212 ILE OXT O N N 213 ILE H H N N 214 ILE H2 H N N 215 ILE HA H N N 216 ILE HB H N N 217 ILE HG12 H N N 218 ILE HG13 H N N 219 ILE HG21 H N N 220 ILE HG22 H N N 221 ILE HG23 H N N 222 ILE HD11 H N N 223 ILE HD12 H N N 224 ILE HD13 H N N 225 ILE HXT H N N 226 LEU N N N N 227 LEU CA C N S 228 LEU C C N N 229 LEU O O N N 230 LEU CB C N N 231 LEU CG C N N 232 LEU CD1 C N N 233 LEU CD2 C N N 234 LEU OXT O N N 235 LEU H H N N 236 LEU H2 H N N 237 LEU HA H N N 238 LEU HB2 H N N 239 LEU HB3 H N N 240 LEU HG H N N 241 LEU HD11 H N N 242 LEU HD12 H N N 243 LEU HD13 H N N 244 LEU HD21 H N N 245 LEU HD22 H N N 246 LEU HD23 H N N 247 LEU HXT H N N 248 LYS N N N N 249 LYS CA C N S 250 LYS C C N N 251 LYS O O N N 252 LYS CB C N N 253 LYS CG C N N 254 LYS CD C N N 255 LYS CE C N N 256 LYS NZ N N N 257 LYS OXT O N N 258 LYS H H N N 259 LYS H2 H N N 260 LYS HA H N N 261 LYS HB2 H N N 262 LYS HB3 H N N 263 LYS HG2 H N N 264 LYS HG3 H N N 265 LYS HD2 H N N 266 LYS HD3 H N N 267 LYS HE2 H N N 268 LYS HE3 H N N 269 LYS HZ1 H N N 270 LYS HZ2 H N N 271 LYS HZ3 H N N 272 LYS HXT H N N 273 MET N N N N 274 MET CA C N S 275 MET C C N N 276 MET O O N N 277 MET CB C N N 278 MET CG C N N 279 MET SD S N N 280 MET CE C N N 281 MET OXT O N N 282 MET H H N N 283 MET H2 H N N 284 MET HA H N N 285 MET HB2 H N N 286 MET HB3 H N N 287 MET HG2 H N N 288 MET HG3 H N N 289 MET HE1 H N N 290 MET HE2 H N N 291 MET HE3 H N N 292 MET HXT H N N 293 NAG C1 C N R 294 NAG C2 C N R 295 NAG C3 C N R 296 NAG C4 C N S 297 NAG C5 C N R 298 NAG C6 C N N 299 NAG C7 C N N 300 NAG C8 C N N 301 NAG N2 N N N 302 NAG O1 O N N 303 NAG O3 O N N 304 NAG O4 O N N 305 NAG O5 O N N 306 NAG O6 O N N 307 NAG O7 O N N 308 NAG H1 H N N 309 NAG H2 H N N 310 NAG H3 H N N 311 NAG H4 H N N 312 NAG H5 H N N 313 NAG H61 H N N 314 NAG H62 H N N 315 NAG H81 H N N 316 NAG H82 H N N 317 NAG H83 H N N 318 NAG HN2 H N N 319 NAG HO1 H N N 320 NAG HO3 H N N 321 NAG HO4 H N N 322 NAG HO6 H N N 323 PHE N N N N 324 PHE CA C N S 325 PHE C C N N 326 PHE O O N N 327 PHE CB C N N 328 PHE CG C Y N 329 PHE CD1 C Y N 330 PHE CD2 C Y N 331 PHE CE1 C Y N 332 PHE CE2 C Y N 333 PHE CZ C Y N 334 PHE OXT O N N 335 PHE H H N N 336 PHE H2 H N N 337 PHE HA H N N 338 PHE HB2 H N N 339 PHE HB3 H N N 340 PHE HD1 H N N 341 PHE HD2 H N N 342 PHE HE1 H N N 343 PHE HE2 H N N 344 PHE HZ H N N 345 PHE HXT H N N 346 PRO N N N N 347 PRO CA C N S 348 PRO C C N N 349 PRO O O N N 350 PRO CB C N N 351 PRO CG C N N 352 PRO CD C N N 353 PRO OXT O N N 354 PRO H H N N 355 PRO HA H N N 356 PRO HB2 H N N 357 PRO HB3 H N N 358 PRO HG2 H N N 359 PRO HG3 H N N 360 PRO HD2 H N N 361 PRO HD3 H N N 362 PRO HXT H N N 363 SER N N N N 364 SER CA C N S 365 SER C C N N 366 SER O O N N 367 SER CB C N N 368 SER OG O N N 369 SER OXT O N N 370 SER H H N N 371 SER H2 H N N 372 SER HA H N N 373 SER HB2 H N N 374 SER HB3 H N N 375 SER HG H N N 376 SER HXT H N N 377 THR N N N N 378 THR CA C N S 379 THR C C N N 380 THR O O N N 381 THR CB C N R 382 THR OG1 O N N 383 THR CG2 C N N 384 THR OXT O N N 385 THR H H N N 386 THR H2 H N N 387 THR HA H N N 388 THR HB H N N 389 THR HG1 H N N 390 THR HG21 H N N 391 THR HG22 H N N 392 THR HG23 H N N 393 THR HXT H N N 394 TRP N N N N 395 TRP CA C N S 396 TRP C C N N 397 TRP O O N N 398 TRP CB C N N 399 TRP CG C Y N 400 TRP CD1 C Y N 401 TRP CD2 C Y N 402 TRP NE1 N Y N 403 TRP CE2 C Y N 404 TRP CE3 C Y N 405 TRP CZ2 C Y N 406 TRP CZ3 C Y N 407 TRP CH2 C Y N 408 TRP OXT O N N 409 TRP H H N N 410 TRP H2 H N N 411 TRP HA H N N 412 TRP HB2 H N N 413 TRP HB3 H N N 414 TRP HD1 H N N 415 TRP HE1 H N N 416 TRP HE3 H N N 417 TRP HZ2 H N N 418 TRP HZ3 H N N 419 TRP HH2 H N N 420 TRP HXT H N N 421 TYR N N N N 422 TYR CA C N S 423 TYR C C N N 424 TYR O O N N 425 TYR CB C N N 426 TYR CG C Y N 427 TYR CD1 C Y N 428 TYR CD2 C Y N 429 TYR CE1 C Y N 430 TYR CE2 C Y N 431 TYR CZ C Y N 432 TYR OH O N N 433 TYR OXT O N N 434 TYR H H N N 435 TYR H2 H N N 436 TYR HA H N N 437 TYR HB2 H N N 438 TYR HB3 H N N 439 TYR HD1 H N N 440 TYR HD2 H N N 441 TYR HE1 H N N 442 TYR HE2 H N N 443 TYR HH H N N 444 TYR HXT H N N 445 VAL N N N N 446 VAL CA C N S 447 VAL C C N N 448 VAL O O N N 449 VAL CB C N N 450 VAL CG1 C N N 451 VAL CG2 C N N 452 VAL OXT O N N 453 VAL H H N N 454 VAL H2 H N N 455 VAL HA H N N 456 VAL HB H N N 457 VAL HG11 H N N 458 VAL HG12 H N N 459 VAL HG13 H N N 460 VAL HG21 H N N 461 VAL HG22 H N N 462 VAL HG23 H N N 463 VAL HXT H N N 464 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 FUC C1 C2 sing N N 107 FUC C1 O1 sing N N 108 FUC C1 O5 sing N N 109 FUC C1 H1 sing N N 110 FUC C2 C3 sing N N 111 FUC C2 O2 sing N N 112 FUC C2 H2 sing N N 113 FUC C3 C4 sing N N 114 FUC C3 O3 sing N N 115 FUC C3 H3 sing N N 116 FUC C4 C5 sing N N 117 FUC C4 O4 sing N N 118 FUC C4 H4 sing N N 119 FUC C5 C6 sing N N 120 FUC C5 O5 sing N N 121 FUC C5 H5 sing N N 122 FUC C6 H61 sing N N 123 FUC C6 H62 sing N N 124 FUC C6 H63 sing N N 125 FUC O1 HO1 sing N N 126 FUC O2 HO2 sing N N 127 FUC O3 HO3 sing N N 128 FUC O4 HO4 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 NAG C1 C2 sing N N 282 NAG C1 O1 sing N N 283 NAG C1 O5 sing N N 284 NAG C1 H1 sing N N 285 NAG C2 C3 sing N N 286 NAG C2 N2 sing N N 287 NAG C2 H2 sing N N 288 NAG C3 C4 sing N N 289 NAG C3 O3 sing N N 290 NAG C3 H3 sing N N 291 NAG C4 C5 sing N N 292 NAG C4 O4 sing N N 293 NAG C4 H4 sing N N 294 NAG C5 C6 sing N N 295 NAG C5 O5 sing N N 296 NAG C5 H5 sing N N 297 NAG C6 O6 sing N N 298 NAG C6 H61 sing N N 299 NAG C6 H62 sing N N 300 NAG C7 C8 sing N N 301 NAG C7 N2 sing N N 302 NAG C7 O7 doub N N 303 NAG C8 H81 sing N N 304 NAG C8 H82 sing N N 305 NAG C8 H83 sing N N 306 NAG N2 HN2 sing N N 307 NAG O1 HO1 sing N N 308 NAG O3 HO3 sing N N 309 NAG O4 HO4 sing N N 310 NAG O6 HO6 sing N N 311 PHE N CA sing N N 312 PHE N H sing N N 313 PHE N H2 sing N N 314 PHE CA C sing N N 315 PHE CA CB sing N N 316 PHE CA HA sing N N 317 PHE C O doub N N 318 PHE C OXT sing N N 319 PHE CB CG sing N N 320 PHE CB HB2 sing N N 321 PHE CB HB3 sing N N 322 PHE CG CD1 doub Y N 323 PHE CG CD2 sing Y N 324 PHE CD1 CE1 sing Y N 325 PHE CD1 HD1 sing N N 326 PHE CD2 CE2 doub Y N 327 PHE CD2 HD2 sing N N 328 PHE CE1 CZ doub Y N 329 PHE CE1 HE1 sing N N 330 PHE CE2 CZ sing Y N 331 PHE CE2 HE2 sing N N 332 PHE CZ HZ sing N N 333 PHE OXT HXT sing N N 334 PRO N CA sing N N 335 PRO N CD sing N N 336 PRO N H sing N N 337 PRO CA C sing N N 338 PRO CA CB sing N N 339 PRO CA HA sing N N 340 PRO C O doub N N 341 PRO C OXT sing N N 342 PRO CB CG sing N N 343 PRO CB HB2 sing N N 344 PRO CB HB3 sing N N 345 PRO CG CD sing N N 346 PRO CG HG2 sing N N 347 PRO CG HG3 sing N N 348 PRO CD HD2 sing N N 349 PRO CD HD3 sing N N 350 PRO OXT HXT sing N N 351 SER N CA sing N N 352 SER N H sing N N 353 SER N H2 sing N N 354 SER CA C sing N N 355 SER CA CB sing N N 356 SER CA HA sing N N 357 SER C O doub N N 358 SER C OXT sing N N 359 SER CB OG sing N N 360 SER CB HB2 sing N N 361 SER CB HB3 sing N N 362 SER OG HG sing N N 363 SER OXT HXT sing N N 364 THR N CA sing N N 365 THR N H sing N N 366 THR N H2 sing N N 367 THR CA C sing N N 368 THR CA CB sing N N 369 THR CA HA sing N N 370 THR C O doub N N 371 THR C OXT sing N N 372 THR CB OG1 sing N N 373 THR CB CG2 sing N N 374 THR CB HB sing N N 375 THR OG1 HG1 sing N N 376 THR CG2 HG21 sing N N 377 THR CG2 HG22 sing N N 378 THR CG2 HG23 sing N N 379 THR OXT HXT sing N N 380 TRP N CA sing N N 381 TRP N H sing N N 382 TRP N H2 sing N N 383 TRP CA C sing N N 384 TRP CA CB sing N N 385 TRP CA HA sing N N 386 TRP C O doub N N 387 TRP C OXT sing N N 388 TRP CB CG sing N N 389 TRP CB HB2 sing N N 390 TRP CB HB3 sing N N 391 TRP CG CD1 doub Y N 392 TRP CG CD2 sing Y N 393 TRP CD1 NE1 sing Y N 394 TRP CD1 HD1 sing N N 395 TRP CD2 CE2 doub Y N 396 TRP CD2 CE3 sing Y N 397 TRP NE1 CE2 sing Y N 398 TRP NE1 HE1 sing N N 399 TRP CE2 CZ2 sing Y N 400 TRP CE3 CZ3 doub Y N 401 TRP CE3 HE3 sing N N 402 TRP CZ2 CH2 doub Y N 403 TRP CZ2 HZ2 sing N N 404 TRP CZ3 CH2 sing Y N 405 TRP CZ3 HZ3 sing N N 406 TRP CH2 HH2 sing N N 407 TRP OXT HXT sing N N 408 TYR N CA sing N N 409 TYR N H sing N N 410 TYR N H2 sing N N 411 TYR CA C sing N N 412 TYR CA CB sing N N 413 TYR CA HA sing N N 414 TYR C O doub N N 415 TYR C OXT sing N N 416 TYR CB CG sing N N 417 TYR CB HB2 sing N N 418 TYR CB HB3 sing N N 419 TYR CG CD1 doub Y N 420 TYR CG CD2 sing Y N 421 TYR CD1 CE1 sing Y N 422 TYR CD1 HD1 sing N N 423 TYR CD2 CE2 doub Y N 424 TYR CD2 HD2 sing N N 425 TYR CE1 CZ doub Y N 426 TYR CE1 HE1 sing N N 427 TYR CE2 CZ sing Y N 428 TYR CE2 HE2 sing N N 429 TYR CZ OH sing N N 430 TYR OH HH sing N N 431 TYR OXT HXT sing N N 432 VAL N CA sing N N 433 VAL N H sing N N 434 VAL N H2 sing N N 435 VAL CA C sing N N 436 VAL CA CB sing N N 437 VAL CA HA sing N N 438 VAL C O doub N N 439 VAL C OXT sing N N 440 VAL CB CG1 sing N N 441 VAL CB CG2 sing N N 442 VAL CB HB sing N N 443 VAL CG1 HG11 sing N N 444 VAL CG1 HG12 sing N N 445 VAL CG1 HG13 sing N N 446 VAL CG2 HG21 sing N N 447 VAL CG2 HG22 sing N N 448 VAL CG2 HG23 sing N N 449 VAL OXT HXT sing N N 450 # _em_admin.current_status REL _em_admin.deposition_date 2025-10-29 _em_admin.deposition_site RCSB _em_admin.entry_id 9YYX _em_admin.last_update 2026-11-04 _em_admin.map_release_date 2026-11-04 _em_admin.title 'Cryo-EM structure of HKU1 spike with antibody HKU1-11 (local refinement of CTD, NTD, and Fab variable domain)' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 45 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? ? OTHER ? 8 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? CLASSIFICATION ? 11 1 ? ? ? ? ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC ? ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX 1.20.1_4487 ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Bill & Melinda Gates Foundation' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number INV-004923 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 5 NAG 1 n 5 NAG 2 n 5 FUC 3 n 6 NAG 1 n 6 NAG 2 n 6 BMA 3 n # _atom_sites.entry_id 9YYX _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #