HEADER DNA BINDING PROTEIN/DNA 11-NOV-25 9Z4Y TITLE HUMAN APE1 D210N WITH MG AND SUBSTRATE TETRAHYDROFURAN-CONTAINING DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPAIR NUCLEASE/REDOX REGULATOR APEX1, MITOCHONDRIAL; COMPND 3 CHAIN: A, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(*GP*CP*TP*AP*CP*(3DR)P*GP*AP*TP*CP*G)-3'); COMPND 8 CHAIN: B, E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP*C)-3'); COMPND 12 CHAIN: C, F; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APEX1, APE, APE1, APEX, APX, HAP1, REF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630 KEYWDS DNA REPAIR, BASE EXCISION REPAIR, REF1, REDOX, EEP DOMAIN, APE1, DNA KEYWDS 2 BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.E.TSUTAKAWA,J.A.TAINER,A.ARVAI REVDAT 1 23-SEP-26 9Z4Y 0 JRNL AUTH S.E.TSUTAKAWA,J.A.TAINER,A.ARVAI JRNL TITL HUMAN APE1 D210N WITH MG AND SUBSTRATE JRNL TITL 2 TETRAHYDROFURAN-CONTAINING DNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 44178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.9500 - 5.1700 0.99 2852 151 0.1649 0.1836 REMARK 3 2 5.1700 - 4.1100 1.00 2851 150 0.1361 0.1664 REMARK 3 3 4.1100 - 3.5900 1.00 2805 149 0.1599 0.2189 REMARK 3 4 3.5900 - 3.2600 1.00 2829 148 0.1697 0.2188 REMARK 3 5 3.2600 - 3.0300 1.00 2834 148 0.1883 0.2257 REMARK 3 6 3.0300 - 2.8500 1.00 2820 150 0.1992 0.2646 REMARK 3 7 2.8500 - 2.7100 1.00 2804 147 0.2050 0.2640 REMARK 3 8 2.7100 - 2.5900 1.00 2827 149 0.2075 0.2584 REMARK 3 9 2.5900 - 2.4900 1.00 2796 147 0.2110 0.2797 REMARK 3 10 2.4900 - 2.4000 1.00 2806 147 0.1992 0.2703 REMARK 3 11 2.4000 - 2.3300 1.00 2835 148 0.2096 0.2379 REMARK 3 12 2.3300 - 2.2600 1.00 2812 149 0.2328 0.3226 REMARK 3 13 2.2600 - 2.2000 0.94 2649 144 0.2933 0.3754 REMARK 3 14 2.2000 - 2.1500 0.81 2253 125 0.2339 0.2760 REMARK 3 15 2.1500 - 2.1000 0.64 1807 93 0.2452 0.2376 REMARK 3 16 2.1000 - 2.0500 0.49 1386 67 0.2654 0.3314 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.251 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.157 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5462 REMARK 3 ANGLE : 0.802 7580 REMARK 3 CHIRALITY : 0.048 808 REMARK 3 PLANARITY : 0.007 830 REMARK 3 DIHEDRAL : 17.593 2121 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9Z4Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1000302022. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46722 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 35.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.030 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17.5% MPEG 2K, 5% LISO4, 0.5% BME, 20 REMARK 280 MM MGCL2, 100 MM PH 6.5 HEPES, VAPOR DIFFUSION, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 64.26550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 40 REMARK 465 GLY A 41 REMARK 465 PRO A 42 REMARK 465 GLU D 40 REMARK 465 GLY D 41 REMARK 465 PRO D 42 REMARK 465 GLU D 149 REMARK 465 GLU D 150 REMARK 465 DG E 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC B 5 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG B 7 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG C 17 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG C 21 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC E 5 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG E 7 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 70 71.48 48.05 REMARK 500 GLU A 110 33.25 -96.06 REMARK 500 LEU A 111 73.51 -116.08 REMARK 500 SER A 129 -142.70 55.86 REMARK 500 ASN A 222 77.48 -111.18 REMARK 500 PHE A 232 26.30 -142.76 REMARK 500 SER D 129 -136.44 51.64 REMARK 500 PHE D 162 -169.18 -111.45 REMARK 500 PHE D 232 22.64 -143.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 678 DISTANCE = 6.30 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 70 OD2 REMARK 620 2 GLU A 96 OE2 92.8 REMARK 620 3 HOH B 502 O 62.0 103.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 109 O REMARK 620 2 VAL D 142 N 97.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 264 O REMARK 620 2 SER A 302 OG 133.3 REMARK 620 3 HOH A 503 O 96.0 130.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 101 OE2 REMARK 620 2 HOH D 564 O 129.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY D 147 N REMARK 620 2 GLN D 153 OE1 87.4 REMARK 620 N 1 DBREF 9Z4Y A 40 318 UNP P27695 APEX1_HUMAN 40 318 DBREF 9Z4Y B 1 11 PDB 9Z4Y 9Z4Y 1 11 DBREF 9Z4Y C 12 22 PDB 9Z4Y 9Z4Y 12 22 DBREF 9Z4Y D 40 318 UNP P27695 APEX1_HUMAN 40 318 DBREF 9Z4Y E 1 11 PDB 9Z4Y 9Z4Y 1 11 DBREF 9Z4Y F 12 22 PDB 9Z4Y 9Z4Y 12 22 SEQADV 9Z4Y ASN A 210 UNP P27695 ASP 210 ENGINEERED MUTATION SEQADV 9Z4Y ASN D 210 UNP P27695 ASP 210 ENGINEERED MUTATION SEQRES 1 A 279 GLU GLY PRO ALA LEU TYR GLU ASP PRO PRO ASP GLN LYS SEQRES 2 A 279 THR SER PRO SER GLY LYS PRO ALA THR LEU LYS ILE CYS SEQRES 3 A 279 SER TRP ASN VAL ASP GLY LEU ARG ALA TRP ILE LYS LYS SEQRES 4 A 279 LYS GLY LEU ASP TRP VAL LYS GLU GLU ALA PRO ASP ILE SEQRES 5 A 279 LEU CYS LEU GLN GLU THR LYS CYS SER GLU ASN LYS LEU SEQRES 6 A 279 PRO ALA GLU LEU GLN GLU LEU PRO GLY LEU SER HIS GLN SEQRES 7 A 279 TYR TRP SER ALA PRO SER ASP LYS GLU GLY TYR SER GLY SEQRES 8 A 279 VAL GLY LEU LEU SER ARG GLN CYS PRO LEU LYS VAL SER SEQRES 9 A 279 TYR GLY ILE GLY ASP GLU GLU HIS ASP GLN GLU GLY ARG SEQRES 10 A 279 VAL ILE VAL ALA GLU PHE ASP SER PHE VAL LEU VAL THR SEQRES 11 A 279 ALA TYR VAL PRO ASN ALA GLY ARG GLY LEU VAL ARG LEU SEQRES 12 A 279 GLU TYR ARG GLN ARG TRP ASP GLU ALA PHE ARG LYS PHE SEQRES 13 A 279 LEU LYS GLY LEU ALA SER ARG LYS PRO LEU VAL LEU CYS SEQRES 14 A 279 GLY ASN LEU ASN VAL ALA HIS GLU GLU ILE ASP LEU ARG SEQRES 15 A 279 ASN PRO LYS GLY ASN LYS LYS ASN ALA GLY PHE THR PRO SEQRES 16 A 279 GLN GLU ARG GLN GLY PHE GLY GLU LEU LEU GLN ALA VAL SEQRES 17 A 279 PRO LEU ALA ASP SER PHE ARG HIS LEU TYR PRO ASN THR SEQRES 18 A 279 PRO TYR ALA TYR THR PHE TRP THR TYR MET MET ASN ALA SEQRES 19 A 279 ARG SER LYS ASN VAL GLY TRP ARG LEU ASP TYR PHE LEU SEQRES 20 A 279 LEU SER HIS SER LEU LEU PRO ALA LEU CYS ASP SER LYS SEQRES 21 A 279 ILE ARG SER LYS ALA LEU GLY SER ASP HIS CYS PRO ILE SEQRES 22 A 279 THR LEU TYR LEU ALA LEU SEQRES 1 B 11 DG DC DT DA DC 3DR DG DA DT DC DG SEQRES 1 C 11 DC DG DA DT DC DG DG DT DA DG DC SEQRES 1 D 279 GLU GLY PRO ALA LEU TYR GLU ASP PRO PRO ASP GLN LYS SEQRES 2 D 279 THR SER PRO SER GLY LYS PRO ALA THR LEU LYS ILE CYS SEQRES 3 D 279 SER TRP ASN VAL ASP GLY LEU ARG ALA TRP ILE LYS LYS SEQRES 4 D 279 LYS GLY LEU ASP TRP VAL LYS GLU GLU ALA PRO ASP ILE SEQRES 5 D 279 LEU CYS LEU GLN GLU THR LYS CYS SER GLU ASN LYS LEU SEQRES 6 D 279 PRO ALA GLU LEU GLN GLU LEU PRO GLY LEU SER HIS GLN SEQRES 7 D 279 TYR TRP SER ALA PRO SER ASP LYS GLU GLY TYR SER GLY SEQRES 8 D 279 VAL GLY LEU LEU SER ARG GLN CYS PRO LEU LYS VAL SER SEQRES 9 D 279 TYR GLY ILE GLY ASP GLU GLU HIS ASP GLN GLU GLY ARG SEQRES 10 D 279 VAL ILE VAL ALA GLU PHE ASP SER PHE VAL LEU VAL THR SEQRES 11 D 279 ALA TYR VAL PRO ASN ALA GLY ARG GLY LEU VAL ARG LEU SEQRES 12 D 279 GLU TYR ARG GLN ARG TRP ASP GLU ALA PHE ARG LYS PHE SEQRES 13 D 279 LEU LYS GLY LEU ALA SER ARG LYS PRO LEU VAL LEU CYS SEQRES 14 D 279 GLY ASN LEU ASN VAL ALA HIS GLU GLU ILE ASP LEU ARG SEQRES 15 D 279 ASN PRO LYS GLY ASN LYS LYS ASN ALA GLY PHE THR PRO SEQRES 16 D 279 GLN GLU ARG GLN GLY PHE GLY GLU LEU LEU GLN ALA VAL SEQRES 17 D 279 PRO LEU ALA ASP SER PHE ARG HIS LEU TYR PRO ASN THR SEQRES 18 D 279 PRO TYR ALA TYR THR PHE TRP THR TYR MET MET ASN ALA SEQRES 19 D 279 ARG SER LYS ASN VAL GLY TRP ARG LEU ASP TYR PHE LEU SEQRES 20 D 279 LEU SER HIS SER LEU LEU PRO ALA LEU CYS ASP SER LYS SEQRES 21 D 279 ILE ARG SER LYS ALA LEU GLY SER ASP HIS CYS PRO ILE SEQRES 22 D 279 THR LEU TYR LEU ALA LEU SEQRES 1 E 11 DG DC DT DA DC 3DR DG DA DT DC DG SEQRES 1 F 11 DC DG DA DT DC DG DG DT DA DG DC HET 3DR B 6 19 HET 3DR E 6 19 HET MG A 401 1 HET MG A 402 1 HET SO4 A 403 5 HET SO4 A 404 5 HET MG B 401 1 HET MG D 401 1 HET MG D 402 1 HET SO4 D 403 5 HET SO4 D 404 5 HETNAM 3DR 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETSYN 3DR ABASIC DIDEOXYRIBOSE FORMUL 2 3DR 2(C5 H11 O6 P) FORMUL 7 MG 5(MG 2+) FORMUL 9 SO4 4(O4 S 2-) FORMUL 16 HOH *437(H2 O) HELIX 1 AA1 GLY A 71 LYS A 78 1 8 HELIX 2 AA2 LYS A 79 ALA A 88 1 10 HELIX 3 AA3 SER A 100 LEU A 104 5 5 HELIX 4 AA4 ALA A 106 SER A 115 5 10 HELIX 5 AA5 ASP A 148 ASP A 152 5 5 HELIX 6 AA6 GLY A 176 VAL A 180 5 5 HELIX 7 AA7 ARG A 181 LYS A 203 1 23 HELIX 8 AA8 GLU A 216 LEU A 220 5 5 HELIX 9 AA9 PRO A 223 LYS A 227 5 5 HELIX 10 AB1 THR A 233 VAL A 247 1 15 HELIX 11 AB2 SER A 252 TYR A 257 1 6 HELIX 12 AB3 TYR A 269 MET A 271 5 3 HELIX 13 AB4 ASN A 272 ASN A 277 1 6 HELIX 14 AB5 HIS A 289 PRO A 293 5 5 HELIX 15 AB6 GLY D 71 LYS D 78 1 8 HELIX 16 AB7 LYS D 79 ALA D 88 1 10 HELIX 17 AB8 SER D 100 LEU D 104 5 5 HELIX 18 AB9 PRO D 105 LEU D 111 1 7 HELIX 19 AC1 GLY D 176 VAL D 180 5 5 HELIX 20 AC2 ARG D 181 SER D 201 1 21 HELIX 21 AC3 GLU D 216 LEU D 220 5 5 HELIX 22 AC4 PRO D 223 LYS D 227 5 5 HELIX 23 AC5 THR D 233 VAL D 247 1 15 HELIX 24 AC6 SER D 252 TYR D 257 1 6 HELIX 25 AC7 TYR D 269 ALA D 273 5 5 HELIX 26 AC8 HIS D 289 PRO D 293 5 5 SHEET 1 AA1 6 HIS A 116 SER A 120 0 SHEET 2 AA1 6 VAL A 131 SER A 135 -1 O LEU A 133 N TYR A 118 SHEET 3 AA1 6 ILE A 91 GLN A 95 -1 N LEU A 92 O LEU A 134 SHEET 4 AA1 6 LEU A 62 ASN A 68 1 N CYS A 65 O ILE A 91 SHEET 5 AA1 6 ILE A 312 LEU A 316 -1 O LEU A 314 N ILE A 64 SHEET 6 AA1 6 LEU A 295 ILE A 300 -1 N LYS A 299 O THR A 313 SHEET 1 AA2 6 LYS A 141 TYR A 144 0 SHEET 2 AA2 6 VAL A 157 GLU A 161 -1 O VAL A 159 N SER A 143 SHEET 3 AA2 6 VAL A 166 TYR A 171 -1 O LEU A 167 N ALA A 160 SHEET 4 AA2 6 LEU A 205 ASN A 210 1 O VAL A 206 N VAL A 168 SHEET 5 AA2 6 ASP A 283 LEU A 287 -1 O LEU A 286 N LEU A 207 SHEET 6 AA2 6 ALA A 250 ASP A 251 -1 N ALA A 250 O LEU A 287 SHEET 1 AA3 6 HIS D 116 SER D 120 0 SHEET 2 AA3 6 VAL D 131 SER D 135 -1 O LEU D 133 N TYR D 118 SHEET 3 AA3 6 ILE D 91 GLN D 95 -1 N LEU D 92 O LEU D 134 SHEET 4 AA3 6 LEU D 62 ASN D 68 1 N CYS D 65 O ILE D 91 SHEET 5 AA3 6 ILE D 312 LEU D 316 -1 O LEU D 314 N ILE D 64 SHEET 6 AA3 6 LEU D 295 ILE D 300 -1 N LYS D 299 O THR D 313 SHEET 1 AA4 6 LYS D 141 TYR D 144 0 SHEET 2 AA4 6 VAL D 157 GLU D 161 -1 O VAL D 159 N SER D 143 SHEET 3 AA4 6 VAL D 166 TYR D 171 -1 O LEU D 167 N ALA D 160 SHEET 4 AA4 6 LEU D 205 ASN D 210 1 O CYS D 208 N VAL D 168 SHEET 5 AA4 6 ASP D 283 LEU D 287 -1 O LEU D 286 N LEU D 207 SHEET 6 AA4 6 ALA D 250 ASP D 251 -1 N ALA D 250 O LEU D 287 LINK O3' DC B 5 P 3DR B 6 1555 1555 1.60 LINK O3' 3DR B 6 P DG B 7 1555 1555 1.61 LINK O3' DC E 5 P 3DR E 6 1555 1555 1.60 LINK O3' 3DR E 6 P DG E 7 1555 1555 1.61 LINK OD2 ASP A 70 MG MG B 401 1555 1555 2.95 LINK OE2 GLU A 96 MG MG B 401 1555 1555 2.80 LINK O GLN A 109 MG MG A 401 1555 1555 2.12 LINK O TYR A 264 MG MG A 402 1555 1555 2.72 LINK OG SER A 302 MG MG A 402 1555 1555 2.29 LINK MG MG A 401 N VAL D 142 1555 1555 2.97 LINK MG MG A 402 O HOH A 503 1555 1555 2.56 LINK MG MG B 401 O HOH B 502 1555 1555 2.11 LINK OE2 GLU D 101 MG MG D 401 1555 1555 2.40 LINK N GLY D 147 MG MG D 402 1555 1555 2.93 LINK OE1 GLN D 153 MG MG D 402 1555 1555 2.26 LINK MG MG D 401 O HOH D 564 1555 1555 2.56 CISPEP 1 VAL A 247 PRO A 248 0 -6.03 CISPEP 2 VAL D 247 PRO D 248 0 -5.48 CRYST1 47.022 128.531 64.756 90.00 96.41 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021267 0.000000 0.002390 0.00000 SCALE2 0.000000 0.007780 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015540 0.00000 CONECT 41610061 CONECT 83810061 CONECT 103410049 CONECT 346810050 CONECT 411310050 CONECT 4498 4521 CONECT 4520 4521 4525 CONECT 4521 4498 4520 4522 4523 CONECT 4522 4521 CONECT 4523 4521 CONECT 4524 4528 4529 4531 4532 CONECT 4525 4520 4526 4533 4534 CONECT 4526 4525 4527 4529 4535 CONECT 4527 4526 4528 CONECT 4528 4524 4527 4536 4537 CONECT 4529 4524 4526 4530 4538 CONECT 4530 4529 4539 CONECT 4531 4524 CONECT 4532 4524 CONECT 4533 4525 CONECT 4534 4525 CONECT 4535 4526 CONECT 4536 4528 CONECT 4537 4528 CONECT 4538 4529 CONECT 4539 4530 CONECT 597210062 CONECT 659310049 CONECT 666710063 CONECT 672210063 CONECT 9530 9553 CONECT 9552 9553 9557 CONECT 9553 9530 9552 9554 9555 CONECT 9554 9553 CONECT 9555 9553 CONECT 9556 9560 9561 9563 9564 CONECT 9557 9552 9558 9565 9566 CONECT 9558 9557 9559 9561 9567 CONECT 9559 9558 9560 CONECT 9560 9556 9559 9568 9569 CONECT 9561 9556 9558 9562 9570 CONECT 9562 9561 9571 CONECT 9563 9556 CONECT 9564 9556 CONECT 9565 9557 CONECT 9566 9557 CONECT 9567 9558 CONECT 9568 9560 CONECT 9569 9560 CONECT 9570 9561 CONECT 9571 9562 CONECT10049 1034 6593 CONECT10050 3468 411310076 CONECT1005110052100531005410055 CONECT1005210051 CONECT1005310051 CONECT1005410051 CONECT1005510051 CONECT1005610057100581005910060 CONECT1005710056 CONECT1005810056 CONECT1005910056 CONECT1006010056 CONECT10061 416 83810253 CONECT10062 597210353 CONECT10063 6667 6722 CONECT1006410065100661006710068 CONECT1006510064 CONECT1006610064 CONECT1006710064 CONECT1006810064 CONECT1006910070100711007210073 CONECT1007010069 CONECT1007110069 CONECT1007210069 CONECT1007310069 CONECT1007610050 CONECT1025310061 CONECT1035310062 MASTER 331 0 11 26 24 0 0 6 5692 6 79 48 END