HEADER ONCOPROTEIN 12-NOV-25 9Z5W TITLE CRYSTAL STRUCTURE OF HRAS IN COMPLEX WITH N-LHY AFFIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: N-LHY AFFIBODY; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 10 ORGANISM_TAXID: 32644; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SMALL GTPASE, ONCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.GADE,J.PIXLEY,M.STYLES,B.C.DICKINSON,M.ENDRES,K.MICHALSKA, AUTHOR 2 A.JOACHIMIAK REVDAT 1 03-JUN-26 9Z5W 0 JRNL AUTH P.GADE,J.PIXLEY,M.STYLES,B.C.DICKINSON,M.ENDRES,K.MICHALSKA, JRNL AUTH 2 A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF HRAS IN COMPLEX WITH N-LHY AFFIBODY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 23192 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1738 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1654 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE SET COUNT : 117 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1622 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 87 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.77000 REMARK 3 B12 (A**2) : 0.12000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.123 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.114 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.966 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1688 ; 0.010 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1600 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2285 ; 1.840 ; 1.822 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3672 ; 0.623 ; 1.785 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 204 ; 6.264 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 10 ; 7.474 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 294 ;15.554 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 261 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1976 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 382 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 825 ; 2.730 ; 2.829 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 825 ; 2.723 ; 2.830 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1026 ; 3.820 ; 5.039 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1027 ; 3.820 ; 5.041 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 863 ; 4.099 ; 3.303 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 864 ; 4.096 ; 3.308 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1260 ; 6.178 ; 5.875 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1866 ; 7.575 ;29.250 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1855 ; 7.566 ;28.600 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 25 REMARK 3 ORIGIN FOR THE GROUP (A): -8.0657 -11.2560 -16.8147 REMARK 3 T TENSOR REMARK 3 T11: 0.2164 T22: 0.2405 REMARK 3 T33: 0.1964 T12: -0.0962 REMARK 3 T13: 0.1225 T23: 0.0744 REMARK 3 L TENSOR REMARK 3 L11: 4.3765 L22: 2.5311 REMARK 3 L33: 3.6522 L12: -0.5236 REMARK 3 L13: 1.0885 L23: -0.9401 REMARK 3 S TENSOR REMARK 3 S11: 0.0872 S12: 0.3927 S13: 0.5116 REMARK 3 S21: -0.4836 S22: -0.1888 S23: -0.3741 REMARK 3 S31: -0.4235 S32: 0.8901 S33: 0.1015 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 26 A 38 REMARK 3 ORIGIN FOR THE GROUP (A): 1.3344 -16.8681 -10.4153 REMARK 3 T TENSOR REMARK 3 T11: 0.3133 T22: 0.4323 REMARK 3 T33: 0.3821 T12: -0.0182 REMARK 3 T13: 0.0364 T23: 0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.5012 L22: 3.8747 REMARK 3 L33: 0.3587 L12: 0.4009 REMARK 3 L13: 0.3190 L23: 0.9919 REMARK 3 S TENSOR REMARK 3 S11: -0.1052 S12: 0.1415 S13: 0.1098 REMARK 3 S21: 0.2058 S22: 0.2309 S23: -0.7817 REMARK 3 S31: -0.0350 S32: 0.1142 S33: -0.1256 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 A 48 REMARK 3 ORIGIN FOR THE GROUP (A): -5.4114 -11.5282 -26.5939 REMARK 3 T TENSOR REMARK 3 T11: 0.1980 T22: 0.4469 REMARK 3 T33: 0.3391 T12: -0.1527 REMARK 3 T13: 0.1049 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 6.0935 L22: 16.8566 REMARK 3 L33: 17.1958 L12: 7.1662 REMARK 3 L13: 8.9926 L23: 16.2877 REMARK 3 S TENSOR REMARK 3 S11: -0.2436 S12: 0.4294 S13: 0.0421 REMARK 3 S21: -0.4547 S22: 0.3105 S23: -0.0351 REMARK 3 S31: -0.5491 S32: 0.6322 S33: -0.0670 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 49 A 58 REMARK 3 ORIGIN FOR THE GROUP (A): -8.0713 -8.2128 -22.9691 REMARK 3 T TENSOR REMARK 3 T11: 0.1139 T22: 0.1445 REMARK 3 T33: 0.1784 T12: -0.0226 REMARK 3 T13: 0.0324 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 0.2488 L22: 1.6414 REMARK 3 L33: 11.5116 L12: -0.0525 REMARK 3 L13: 0.4764 L23: 1.5391 REMARK 3 S TENSOR REMARK 3 S11: 0.0484 S12: -0.0108 S13: 0.1095 REMARK 3 S21: -0.0715 S22: -0.0749 S23: 0.0034 REMARK 3 S31: -0.1321 S32: 0.0430 S33: 0.0265 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 59 A 86 REMARK 3 ORIGIN FOR THE GROUP (A): -15.2443 -10.2628 -11.4449 REMARK 3 T TENSOR REMARK 3 T11: 0.2317 T22: 0.0930 REMARK 3 T33: 0.1955 T12: -0.0474 REMARK 3 T13: 0.0785 T23: 0.0590 REMARK 3 L TENSOR REMARK 3 L11: 3.9036 L22: 9.9359 REMARK 3 L33: 15.6001 L12: -2.1972 REMARK 3 L13: 2.5660 L23: -9.8299 REMARK 3 S TENSOR REMARK 3 S11: 0.0568 S12: 0.0803 S13: 0.7184 REMARK 3 S21: 0.5040 S22: -0.1643 S23: -0.3349 REMARK 3 S31: -1.5487 S32: 0.4552 S33: 0.1075 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 87 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): -21.9504 -8.5953 -5.9305 REMARK 3 T TENSOR REMARK 3 T11: 0.2297 T22: 0.0962 REMARK 3 T33: 0.2153 T12: 0.0148 REMARK 3 T13: 0.1575 T23: 0.0581 REMARK 3 L TENSOR REMARK 3 L11: 5.1949 L22: 15.8641 REMARK 3 L33: 8.2994 L12: -5.1802 REMARK 3 L13: 3.2732 L23: -8.6269 REMARK 3 S TENSOR REMARK 3 S11: 0.1631 S12: -0.1316 S13: 0.5654 REMARK 3 S21: 0.5408 S22: 0.2750 S23: 0.4017 REMARK 3 S31: -1.0427 S32: -0.1499 S33: -0.4381 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): -17.9808 -17.0098 -10.4651 REMARK 3 T TENSOR REMARK 3 T11: 0.0510 T22: 0.0918 REMARK 3 T33: 0.0764 T12: -0.0035 REMARK 3 T13: 0.0148 T23: 0.0719 REMARK 3 L TENSOR REMARK 3 L11: 2.6553 L22: 5.7778 REMARK 3 L33: 7.8458 L12: -0.2027 REMARK 3 L13: 0.8386 L23: -3.6422 REMARK 3 S TENSOR REMARK 3 S11: 0.0781 S12: -0.0804 S13: 0.1249 REMARK 3 S21: -0.1689 S22: 0.3077 S23: 0.3281 REMARK 3 S31: -0.3600 S32: -0.2779 S33: -0.3857 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 127 A 143 REMARK 3 ORIGIN FOR THE GROUP (A): -25.0194 -20.5989 -11.3139 REMARK 3 T TENSOR REMARK 3 T11: 0.0198 T22: 0.0817 REMARK 3 T33: 0.0939 T12: -0.0303 REMARK 3 T13: -0.0202 T23: 0.0722 REMARK 3 L TENSOR REMARK 3 L11: 9.1670 L22: 7.1565 REMARK 3 L33: 6.5545 L12: -5.1036 REMARK 3 L13: -2.8075 L23: -0.6712 REMARK 3 S TENSOR REMARK 3 S11: 0.0507 S12: 0.0139 S13: -0.2095 REMARK 3 S21: -0.0476 S22: 0.1753 S23: 0.4901 REMARK 3 S31: 0.2311 S32: -0.4696 S33: -0.2260 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 144 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): -13.0542 -17.9163 -21.1202 REMARK 3 T TENSOR REMARK 3 T11: 0.1725 T22: 0.0679 REMARK 3 T33: 0.1004 T12: -0.0065 REMARK 3 T13: 0.0409 T23: 0.0436 REMARK 3 L TENSOR REMARK 3 L11: 6.4096 L22: 9.6636 REMARK 3 L33: 12.4415 L12: -5.4907 REMARK 3 L13: 3.6976 L23: -6.7334 REMARK 3 S TENSOR REMARK 3 S11: 0.3276 S12: 0.3019 S13: -0.1906 REMARK 3 S21: -0.8413 S22: -0.1185 S23: 0.1539 REMARK 3 S31: -0.0867 S32: 0.2578 S33: -0.2090 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 18 REMARK 3 ORIGIN FOR THE GROUP (A): -40.7922 -17.0201 -14.5365 REMARK 3 T TENSOR REMARK 3 T11: 0.1288 T22: 0.3752 REMARK 3 T33: 0.1826 T12: 0.0523 REMARK 3 T13: 0.0008 T23: 0.1155 REMARK 3 L TENSOR REMARK 3 L11: 17.2511 L22: 12.8275 REMARK 3 L33: 11.5054 L12: 9.9984 REMARK 3 L13: 6.3744 L23: 5.5201 REMARK 3 S TENSOR REMARK 3 S11: -0.1752 S12: 1.1643 S13: -0.2028 REMARK 3 S21: -0.7768 S22: 0.2109 S23: 0.2999 REMARK 3 S31: -0.0268 S32: -0.7234 S33: -0.0358 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 19 B 37 REMARK 3 ORIGIN FOR THE GROUP (A): -33.4786 -17.0818 -3.7664 REMARK 3 T TENSOR REMARK 3 T11: 0.0148 T22: 0.1499 REMARK 3 T33: 0.1210 T12: 0.0362 REMARK 3 T13: 0.0259 T23: 0.1221 REMARK 3 L TENSOR REMARK 3 L11: 10.3653 L22: 3.3349 REMARK 3 L33: 4.3468 L12: 3.0118 REMARK 3 L13: -0.1016 L23: 0.1172 REMARK 3 S TENSOR REMARK 3 S11: 0.3009 S12: 0.5285 S13: 0.0777 REMARK 3 S21: 0.0009 S22: -0.0438 S23: -0.1998 REMARK 3 S31: -0.0903 S32: -0.0997 S33: -0.2571 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 38 B 58 REMARK 3 ORIGIN FOR THE GROUP (A): -40.4608 -11.3938 -1.7008 REMARK 3 T TENSOR REMARK 3 T11: 0.0702 T22: 0.1355 REMARK 3 T33: 0.2200 T12: 0.0721 REMARK 3 T13: 0.0530 T23: 0.1128 REMARK 3 L TENSOR REMARK 3 L11: 8.8496 L22: 11.7191 REMARK 3 L33: 9.8072 L12: 6.2322 REMARK 3 L13: 4.4011 L23: 7.3750 REMARK 3 S TENSOR REMARK 3 S11: 0.1232 S12: -0.1054 S13: 0.8545 REMARK 3 S21: -0.1695 S22: -0.2998 S23: 0.5444 REMARK 3 S31: -0.6307 S32: -0.6841 S33: 0.1766 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9Z5W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1000301914. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97860 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25123 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 280.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 34.50 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 19.90 REMARK 200 R MERGE FOR SHELL (I) : 3.43700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 6.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM NITRATE, 20 % (W/V) REMARK 280 PEG3350, PH 6.3, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.56000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 187.12000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 140.34000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 233.90000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 46.78000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 93.56000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 187.12000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 233.90000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 140.34000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 46.78000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 PRO A 34 REMARK 465 THR A 35 REMARK 465 ILE A 36 REMARK 465 GLU A 37 REMARK 465 GLY A 60 REMARK 465 GLN A 61 REMARK 465 GLU A 62 REMARK 465 GLU A 63 REMARK 465 TYR A 64 REMARK 465 SER A 65 REMARK 465 ALA A 66 REMARK 465 MET A 67 REMARK 465 ARG A 68 REMARK 465 ASP A 69 REMARK 465 GLN A 70 REMARK 465 TYR A 71 REMARK 465 VAL B 1 REMARK 465 ASP B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 32 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 33 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 72 CG - SD - CE ANGL. DEV. = 14.3 DEGREES REMARK 500 ARG A 135 CG - CD - NE ANGL. DEV. = -12.6 DEGREES REMARK 500 ARG A 164 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 117 36.27 71.08 REMARK 500 ARG A 149 -7.18 86.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 9Z5W A 1 166 UNP P01112 RASH_HUMAN 1 166 DBREF 9Z5W B 1 58 PDB 9Z5W 9Z5W 1 58 SEQADV 9Z5W SER A -2 UNP P01112 EXPRESSION TAG SEQADV 9Z5W ASN A -1 UNP P01112 EXPRESSION TAG SEQADV 9Z5W ALA A 0 UNP P01112 EXPRESSION TAG SEQRES 1 A 169 SER ASN ALA MET THR GLU TYR LYS LEU VAL VAL VAL GLY SEQRES 2 A 169 ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU SEQRES 3 A 169 ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE SEQRES 4 A 169 GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU SEQRES 5 A 169 THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU SEQRES 6 A 169 GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR GLY SEQRES 7 A 169 GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SEQRES 8 A 169 SER PHE GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS SEQRES 9 A 169 ARG VAL LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL SEQRES 10 A 169 GLY ASN LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER SEQRES 11 A 169 ARG GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO SEQRES 12 A 169 TYR ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU SEQRES 13 A 169 ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS SEQRES 1 B 58 VAL ASP ASN LYS PHE ASN LYS GLU LEU HIS TYR ALA ILE SEQRES 2 B 58 HIS GLU ILE GLY ASN LEU PRO ASN LEU ASN VAL TYR GLN SEQRES 3 B 58 ILE ILE ALA PHE VAL ASN SER LEU ASP ASN ASP PRO SER SEQRES 4 B 58 GLN SER ALA ASN LEU LEU ALA GLU ALA LYS LYS LEU ASN SEQRES 5 B 58 ASP ALA GLN ALA PRO LYS HET GDP A 201 40 HET EDO A 202 10 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *87(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 ASN A 86 ASP A 92 1 7 HELIX 3 AA3 ASP A 92 ASP A 105 1 14 HELIX 4 AA4 GLU A 126 GLY A 138 1 13 HELIX 5 AA5 GLY A 151 GLN A 165 1 15 HELIX 6 AA6 PHE B 5 ASN B 18 1 14 HELIX 7 AA7 ASN B 23 ASP B 37 1 15 HELIX 8 AA8 GLN B 40 GLN B 55 1 16 SHEET 1 AA1 6 SER A 39 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O CYS A 51 N VAL A 44 SHEET 3 AA1 6 THR A 2 VAL A 9 1 N VAL A 8 O LEU A 56 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 TYR A 141 GLU A 143 1 O ILE A 142 N LEU A 113 CRYST1 55.529 55.529 280.680 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018009 0.010397 0.000000 0.00000 SCALE2 0.000000 0.020795 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003563 0.00000 CONECT 3257 3258 3259 3260 3261 CONECT 3258 3257 CONECT 3259 3257 CONECT 3260 3257 CONECT 3261 3257 3262 CONECT 3262 3261 3263 3264 3265 CONECT 3263 3262 CONECT 3264 3262 CONECT 3265 3262 3266 CONECT 3266 3265 3267 3285 3286 CONECT 3267 3266 3268 3269 3287 CONECT 3268 3267 3273 CONECT 3269 3267 3270 3271 3288 CONECT 3270 3269 3289 CONECT 3271 3269 3272 3273 3290 CONECT 3272 3271 3291 CONECT 3273 3268 3271 3274 3292 CONECT 3274 3273 3275 3284 CONECT 3275 3274 3276 3293 CONECT 3276 3275 3277 CONECT 3277 3276 3278 3284 CONECT 3278 3277 3279 3280 CONECT 3279 3278 CONECT 3280 3278 3281 3294 CONECT 3281 3280 3282 3283 CONECT 3282 3281 3295 3296 CONECT 3283 3281 3284 CONECT 3284 3274 3277 3283 CONECT 3285 3266 CONECT 3286 3266 CONECT 3287 3267 CONECT 3288 3269 CONECT 3289 3270 CONECT 3290 3271 CONECT 3291 3272 CONECT 3292 3273 CONECT 3293 3275 CONECT 3294 3280 CONECT 3295 3282 CONECT 3296 3282 CONECT 3297 3298 3299 3301 3302 CONECT 3298 3297 3303 CONECT 3299 3297 3300 3304 3305 CONECT 3300 3299 3306 CONECT 3301 3297 CONECT 3302 3297 CONECT 3303 3298 CONECT 3304 3299 CONECT 3305 3299 CONECT 3306 3300 MASTER 558 0 2 8 6 0 0 6 1741 2 50 18 END