HEADER DNA BINDING PROTEIN 15-NOV-25 9Z72 TITLE STRUCTURE OF V. CHOLERAE CAPS (FORM 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MARR FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: G4V31_21100; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STAS DOMAIN, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.R.CHAMBERS,K.D.CORBETT REVDAT 1 03-JUN-26 9Z72 0 JRNL AUTH L.R.CHAMBERS,K.D.CORBETT JRNL TITL A DNA DAMAGE-ACTIVATED KINASE CONTROLS BACTERIAL IMMUNE JRNL TITL 2 PATHWAY EXPRESSION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.1_5286 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 36296 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1828 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.2500 - 5.6000 0.99 2942 133 0.1959 0.2476 REMARK 3 2 5.5900 - 4.4400 1.00 2735 141 0.1664 0.1998 REMARK 3 3 4.4400 - 3.8800 1.00 2699 154 0.1762 0.2296 REMARK 3 4 3.8800 - 3.5300 1.00 2639 153 0.1981 0.2361 REMARK 3 5 3.5300 - 3.2700 1.00 2628 149 0.1962 0.2802 REMARK 3 6 3.2700 - 3.0800 1.00 2636 144 0.2495 0.3022 REMARK 3 7 3.0800 - 2.9300 1.00 2625 119 0.2489 0.3133 REMARK 3 8 2.9300 - 2.8000 1.00 2624 132 0.2477 0.3543 REMARK 3 9 2.8000 - 2.6900 1.00 2544 159 0.2523 0.3101 REMARK 3 10 2.6900 - 2.6000 1.00 2681 125 0.2683 0.4050 REMARK 3 11 2.6000 - 2.5200 1.00 2595 138 0.2908 0.3691 REMARK 3 12 2.5200 - 2.4400 1.00 2536 143 0.2614 0.3155 REMARK 3 13 2.4400 - 2.3800 0.99 2584 138 0.2723 0.3288 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.128 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7054 REMARK 3 ANGLE : 0.592 9515 REMARK 3 CHIRALITY : 0.041 1102 REMARK 3 PLANARITY : 0.005 1203 REMARK 3 DIHEDRAL : 12.768 2566 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -18.2720 19.7625 -24.5328 REMARK 3 T TENSOR REMARK 3 T11: 0.2666 T22: 0.2063 REMARK 3 T33: 0.3408 T12: -0.0608 REMARK 3 T13: -0.0372 T23: -0.0157 REMARK 3 L TENSOR REMARK 3 L11: 2.5741 L22: 2.1373 REMARK 3 L33: 3.5033 L12: -0.0086 REMARK 3 L13: 0.5920 L23: -0.5788 REMARK 3 S TENSOR REMARK 3 S11: 0.1568 S12: -0.2620 S13: -0.2292 REMARK 3 S21: 0.0786 S22: 0.0152 S23: 0.0293 REMARK 3 S31: 0.1118 S32: -0.1385 S33: -0.1116 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -36.6986 14.8194 -3.7466 REMARK 3 T TENSOR REMARK 3 T11: 0.3474 T22: 0.3453 REMARK 3 T33: 0.3509 T12: -0.0276 REMARK 3 T13: -0.0276 T23: 0.0623 REMARK 3 L TENSOR REMARK 3 L11: 2.5742 L22: 1.6418 REMARK 3 L33: 4.7049 L12: 0.3306 REMARK 3 L13: 0.3051 L23: -0.3637 REMARK 3 S TENSOR REMARK 3 S11: 0.0126 S12: 0.3351 S13: -0.2316 REMARK 3 S21: -0.0721 S22: 0.0564 S23: -0.0432 REMARK 3 S31: -0.1195 S32: 0.0838 S33: -0.0698 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -26.9809 -0.7018 -52.6818 REMARK 3 T TENSOR REMARK 3 T11: 0.3319 T22: 0.2876 REMARK 3 T33: 0.3748 T12: 0.0736 REMARK 3 T13: 0.0639 T23: 0.0814 REMARK 3 L TENSOR REMARK 3 L11: 2.1475 L22: 1.9806 REMARK 3 L33: 6.0347 L12: -0.0654 REMARK 3 L13: -0.8518 L23: -1.1913 REMARK 3 S TENSOR REMARK 3 S11: 0.0981 S12: -0.1104 S13: 0.0542 REMARK 3 S21: 0.1948 S22: 0.3724 S23: 0.1948 REMARK 3 S31: -0.3551 S32: -0.7721 S33: -0.3240 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): -55.1723 26.4398 -32.4567 REMARK 3 T TENSOR REMARK 3 T11: 0.3888 T22: 0.2974 REMARK 3 T33: 0.3357 T12: -0.1205 REMARK 3 T13: -0.0538 T23: 0.0770 REMARK 3 L TENSOR REMARK 3 L11: 1.4994 L22: 3.5394 REMARK 3 L33: 2.2937 L12: -1.0711 REMARK 3 L13: -0.7319 L23: 0.8795 REMARK 3 S TENSOR REMARK 3 S11: 0.0548 S12: 0.1337 S13: -0.1019 REMARK 3 S21: -0.2155 S22: -0.0907 S23: 0.0356 REMARK 3 S31: -0.2603 S32: 0.0672 S33: 0.0517 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN E REMARK 3 ORIGIN FOR THE GROUP (A): -16.9975 20.5706 -60.7162 REMARK 3 T TENSOR REMARK 3 T11: 0.6262 T22: 0.2619 REMARK 3 T33: 0.3662 T12: -0.0410 REMARK 3 T13: 0.0055 T23: 0.0755 REMARK 3 L TENSOR REMARK 3 L11: 1.8433 L22: 1.8931 REMARK 3 L33: 3.8368 L12: -0.9731 REMARK 3 L13: -0.3484 L23: -0.0767 REMARK 3 S TENSOR REMARK 3 S11: 0.0298 S12: 0.2457 S13: 0.0910 REMARK 3 S21: -0.6517 S22: -0.0615 S23: -0.2193 REMARK 3 S31: 0.2572 S32: 0.1172 S33: 0.0538 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9Z72 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1000302230. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36315 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 51.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.15700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.65400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1 M BIS-TRIS PH 5.5, REMARK 280 AND 20% (W/V) PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 142.06767 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 284.13533 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 284.13533 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 142.06767 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 -88.75950 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 51.24532 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -142.06767 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 225 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 ASN A 0 REMARK 465 ALA A 1 REMARK 465 LYS A 2 REMARK 465 SER B -1 REMARK 465 ASN B 0 REMARK 465 ALA B 1 REMARK 465 LYS B 2 REMARK 465 SER C -1 REMARK 465 ASN C 0 REMARK 465 ALA C 1 REMARK 465 SER D -1 REMARK 465 ASN D 0 REMARK 465 ALA D 1 REMARK 465 LYS D 2 REMARK 465 SER E -1 REMARK 465 ASN E 0 REMARK 465 ALA E 1 REMARK 465 LYS E 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN D 3 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER C 140 O ILE C 145 1.57 REMARK 500 HG SER E 140 O ILE E 145 1.59 REMARK 500 HH TYR D 110 OD1 ASP D 126 1.60 REMARK 500 HG SER B 140 O ILE B 145 1.60 REMARK 500 OE2 GLU A 123 O HOH A 201 1.92 REMARK 500 O HOH B 203 O HOH B 207 1.96 REMARK 500 OH TYR A 93 O HOH A 202 2.06 REMARK 500 O HOH E 240 O HOH E 246 2.14 REMARK 500 O HOH A 201 O HOH A 252 2.16 REMARK 500 OD1 ASP C 99 O HOH C 201 2.19 REMARK 500 OE1 GLU A 123 O HOH A 203 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU D 171 OG1 THR E 120 1455 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 63 -96.65 -111.38 REMARK 500 LYS A 132 -48.52 69.26 REMARK 500 SER B 63 -100.16 -109.30 REMARK 500 LYS B 132 -54.60 62.35 REMARK 500 SER C 63 -101.57 -115.96 REMARK 500 LYS C 132 -54.80 64.36 REMARK 500 SER D 63 -94.07 -110.18 REMARK 500 LYS D 132 -38.25 69.12 REMARK 500 LEU E 49 32.14 -92.54 REMARK 500 SER E 63 -100.77 -111.96 REMARK 500 LYS E 132 -64.79 64.10 REMARK 500 REMARK 500 REMARK: NULL DBREF1 9Z72 A 2 183 UNP A0A9Q4UMM6_KLEPN DBREF2 9Z72 A A0A9Q4UMM6 2 183 DBREF1 9Z72 B 2 183 UNP A0A9Q4UMM6_KLEPN DBREF2 9Z72 B A0A9Q4UMM6 2 183 DBREF1 9Z72 C 2 183 UNP A0A9Q4UMM6_KLEPN DBREF2 9Z72 C A0A9Q4UMM6 2 183 DBREF1 9Z72 D 2 183 UNP A0A9Q4UMM6_KLEPN DBREF2 9Z72 D A0A9Q4UMM6 2 183 DBREF1 9Z72 E 2 183 UNP A0A9Q4UMM6_KLEPN DBREF2 9Z72 E A0A9Q4UMM6 2 183 SEQADV 9Z72 SER A -1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ASN A 0 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA A 1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA A 58 UNP A0A9Q4UMM SER 58 ENGINEERED MUTATION SEQADV 9Z72 SER B -1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ASN B 0 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA B 1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA B 58 UNP A0A9Q4UMM SER 58 ENGINEERED MUTATION SEQADV 9Z72 SER C -1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ASN C 0 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA C 1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA C 58 UNP A0A9Q4UMM SER 58 ENGINEERED MUTATION SEQADV 9Z72 SER D -1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ASN D 0 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA D 1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA D 58 UNP A0A9Q4UMM SER 58 ENGINEERED MUTATION SEQADV 9Z72 SER E -1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ASN E 0 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA E 1 UNP A0A9Q4UMM EXPRESSION TAG SEQADV 9Z72 ALA E 58 UNP A0A9Q4UMM SER 58 ENGINEERED MUTATION SEQRES 1 A 185 SER ASN ALA LYS GLN LEU THR HIS LYS ILE LEU LEU SER SEQRES 2 A 185 GLU VAL VAL GLY SER ASP HIS ALA PHE GLY ASN ASP GLU SEQRES 3 A 185 GLY SER GLU ALA TYR VAL LYS ILE LYS LYS ILE VAL ASP SEQRES 4 A 185 GLY HIS PRO SER CYS ASP ILE PHE ALA ILE SER LEU GLU SEQRES 5 A 185 GLY ILE ARG PHE THR ASP ALA ALA PHE PRO ARG GLU SER SEQRES 6 A 185 VAL ILE SER LEU ALA LYS ALA LEU LYS GLY GLU LYS GLY SEQRES 7 A 185 PHE TYR LEU SER ASN VAL PRO SER ARG ASP LEU LEU ASP SEQRES 8 A 185 ASN TRP SER TYR GLY ALA THR ALA LYS ASP GLN PRO LEU SEQRES 9 A 185 LEU VAL LYS SER ASP SER GLY TYR GLU VAL LEU GLY VAL SEQRES 10 A 185 LYS LEU SER ALA THR VAL LYS GLU LEU LEU ASP PHE VAL SEQRES 11 A 185 ILE ALA LYS LYS THR VAL THR SER SER HIS VAL SER LYS SEQRES 12 A 185 HIS PHE ASP ILE SER ALA GLN ASN ALA SER GLY ARG LEU SEQRES 13 A 185 LYS LYS LEU HIS ALA THR GLY LEU VAL LEU GLY GLN LYS SEQRES 14 A 185 GLU VAL ALA GLU SER GLY GLY LEU GLU PHE VAL TYR ARG SEQRES 15 A 185 SER ILE LEU SEQRES 1 B 185 SER ASN ALA LYS GLN LEU THR HIS LYS ILE LEU LEU SER SEQRES 2 B 185 GLU VAL VAL GLY SER ASP HIS ALA PHE GLY ASN ASP GLU SEQRES 3 B 185 GLY SER GLU ALA TYR VAL LYS ILE LYS LYS ILE VAL ASP SEQRES 4 B 185 GLY HIS PRO SER CYS ASP ILE PHE ALA ILE SER LEU GLU SEQRES 5 B 185 GLY ILE ARG PHE THR ASP ALA ALA PHE PRO ARG GLU SER SEQRES 6 B 185 VAL ILE SER LEU ALA LYS ALA LEU LYS GLY GLU LYS GLY SEQRES 7 B 185 PHE TYR LEU SER ASN VAL PRO SER ARG ASP LEU LEU ASP SEQRES 8 B 185 ASN TRP SER TYR GLY ALA THR ALA LYS ASP GLN PRO LEU SEQRES 9 B 185 LEU VAL LYS SER ASP SER GLY TYR GLU VAL LEU GLY VAL SEQRES 10 B 185 LYS LEU SER ALA THR VAL LYS GLU LEU LEU ASP PHE VAL SEQRES 11 B 185 ILE ALA LYS LYS THR VAL THR SER SER HIS VAL SER LYS SEQRES 12 B 185 HIS PHE ASP ILE SER ALA GLN ASN ALA SER GLY ARG LEU SEQRES 13 B 185 LYS LYS LEU HIS ALA THR GLY LEU VAL LEU GLY GLN LYS SEQRES 14 B 185 GLU VAL ALA GLU SER GLY GLY LEU GLU PHE VAL TYR ARG SEQRES 15 B 185 SER ILE LEU SEQRES 1 C 185 SER ASN ALA LYS GLN LEU THR HIS LYS ILE LEU LEU SER SEQRES 2 C 185 GLU VAL VAL GLY SER ASP HIS ALA PHE GLY ASN ASP GLU SEQRES 3 C 185 GLY SER GLU ALA TYR VAL LYS ILE LYS LYS ILE VAL ASP SEQRES 4 C 185 GLY HIS PRO SER CYS ASP ILE PHE ALA ILE SER LEU GLU SEQRES 5 C 185 GLY ILE ARG PHE THR ASP ALA ALA PHE PRO ARG GLU SER SEQRES 6 C 185 VAL ILE SER LEU ALA LYS ALA LEU LYS GLY GLU LYS GLY SEQRES 7 C 185 PHE TYR LEU SER ASN VAL PRO SER ARG ASP LEU LEU ASP SEQRES 8 C 185 ASN TRP SER TYR GLY ALA THR ALA LYS ASP GLN PRO LEU SEQRES 9 C 185 LEU VAL LYS SER ASP SER GLY TYR GLU VAL LEU GLY VAL SEQRES 10 C 185 LYS LEU SER ALA THR VAL LYS GLU LEU LEU ASP PHE VAL SEQRES 11 C 185 ILE ALA LYS LYS THR VAL THR SER SER HIS VAL SER LYS SEQRES 12 C 185 HIS PHE ASP ILE SER ALA GLN ASN ALA SER GLY ARG LEU SEQRES 13 C 185 LYS LYS LEU HIS ALA THR GLY LEU VAL LEU GLY GLN LYS SEQRES 14 C 185 GLU VAL ALA GLU SER GLY GLY LEU GLU PHE VAL TYR ARG SEQRES 15 C 185 SER ILE LEU SEQRES 1 D 185 SER ASN ALA LYS GLN LEU THR HIS LYS ILE LEU LEU SER SEQRES 2 D 185 GLU VAL VAL GLY SER ASP HIS ALA PHE GLY ASN ASP GLU SEQRES 3 D 185 GLY SER GLU ALA TYR VAL LYS ILE LYS LYS ILE VAL ASP SEQRES 4 D 185 GLY HIS PRO SER CYS ASP ILE PHE ALA ILE SER LEU GLU SEQRES 5 D 185 GLY ILE ARG PHE THR ASP ALA ALA PHE PRO ARG GLU SER SEQRES 6 D 185 VAL ILE SER LEU ALA LYS ALA LEU LYS GLY GLU LYS GLY SEQRES 7 D 185 PHE TYR LEU SER ASN VAL PRO SER ARG ASP LEU LEU ASP SEQRES 8 D 185 ASN TRP SER TYR GLY ALA THR ALA LYS ASP GLN PRO LEU SEQRES 9 D 185 LEU VAL LYS SER ASP SER GLY TYR GLU VAL LEU GLY VAL SEQRES 10 D 185 LYS LEU SER ALA THR VAL LYS GLU LEU LEU ASP PHE VAL SEQRES 11 D 185 ILE ALA LYS LYS THR VAL THR SER SER HIS VAL SER LYS SEQRES 12 D 185 HIS PHE ASP ILE SER ALA GLN ASN ALA SER GLY ARG LEU SEQRES 13 D 185 LYS LYS LEU HIS ALA THR GLY LEU VAL LEU GLY GLN LYS SEQRES 14 D 185 GLU VAL ALA GLU SER GLY GLY LEU GLU PHE VAL TYR ARG SEQRES 15 D 185 SER ILE LEU SEQRES 1 E 185 SER ASN ALA LYS GLN LEU THR HIS LYS ILE LEU LEU SER SEQRES 2 E 185 GLU VAL VAL GLY SER ASP HIS ALA PHE GLY ASN ASP GLU SEQRES 3 E 185 GLY SER GLU ALA TYR VAL LYS ILE LYS LYS ILE VAL ASP SEQRES 4 E 185 GLY HIS PRO SER CYS ASP ILE PHE ALA ILE SER LEU GLU SEQRES 5 E 185 GLY ILE ARG PHE THR ASP ALA ALA PHE PRO ARG GLU SER SEQRES 6 E 185 VAL ILE SER LEU ALA LYS ALA LEU LYS GLY GLU LYS GLY SEQRES 7 E 185 PHE TYR LEU SER ASN VAL PRO SER ARG ASP LEU LEU ASP SEQRES 8 E 185 ASN TRP SER TYR GLY ALA THR ALA LYS ASP GLN PRO LEU SEQRES 9 E 185 LEU VAL LYS SER ASP SER GLY TYR GLU VAL LEU GLY VAL SEQRES 10 E 185 LYS LEU SER ALA THR VAL LYS GLU LEU LEU ASP PHE VAL SEQRES 11 E 185 ILE ALA LYS LYS THR VAL THR SER SER HIS VAL SER LYS SEQRES 12 E 185 HIS PHE ASP ILE SER ALA GLN ASN ALA SER GLY ARG LEU SEQRES 13 E 185 LYS LYS LEU HIS ALA THR GLY LEU VAL LEU GLY GLN LYS SEQRES 14 E 185 GLU VAL ALA GLU SER GLY GLY LEU GLU PHE VAL TYR ARG SEQRES 15 E 185 SER ILE LEU FORMUL 6 HOH *274(H2 O) HELIX 1 AA1 LEU A 10 GLY A 15 1 6 HELIX 2 AA2 GLY A 21 GLY A 38 1 18 HELIX 3 AA3 ALA A 57 SER A 63 1 7 HELIX 4 AA4 SER A 63 LEU A 71 1 9 HELIX 5 AA5 SER A 84 LYS A 98 1 15 HELIX 6 AA6 SER A 118 LYS A 132 1 15 HELIX 7 AA7 THR A 135 PHE A 143 1 9 HELIX 8 AA8 SER A 146 THR A 160 1 15 HELIX 9 AA9 LEU B 10 GLY B 15 1 6 HELIX 10 AB1 GLY B 21 GLY B 38 1 18 HELIX 11 AB2 ALA B 57 SER B 63 1 7 HELIX 12 AB3 SER B 63 LEU B 71 1 9 HELIX 13 AB4 SER B 84 LYS B 98 1 15 HELIX 14 AB5 SER B 118 LYS B 132 1 15 HELIX 15 AB6 THR B 135 ASP B 144 1 10 HELIX 16 AB7 SER B 146 ALA B 159 1 14 HELIX 17 AB8 LEU C 10 GLY C 15 1 6 HELIX 18 AB9 GLY C 21 GLY C 38 1 18 HELIX 19 AC1 ALA C 57 SER C 63 1 7 HELIX 20 AC2 SER C 63 LEU C 71 1 9 HELIX 21 AC3 SER C 84 ASP C 99 1 16 HELIX 22 AC4 SER C 118 LYS C 132 1 15 HELIX 23 AC5 THR C 135 PHE C 143 1 9 HELIX 24 AC6 SER C 146 THR C 160 1 15 HELIX 25 AC7 LEU D 10 GLY D 15 1 6 HELIX 26 AC8 GLY D 21 GLY D 38 1 18 HELIX 27 AC9 ALA D 57 SER D 63 1 7 HELIX 28 AD1 SER D 63 LEU D 71 1 9 HELIX 29 AD2 SER D 84 ASP D 99 1 16 HELIX 30 AD3 SER D 118 LYS D 132 1 15 HELIX 31 AD4 THR D 135 ASP D 144 1 10 HELIX 32 AD5 SER D 146 THR D 160 1 15 HELIX 33 AD6 LEU E 10 GLY E 15 1 6 HELIX 34 AD7 GLY E 21 HIS E 39 1 19 HELIX 35 AD8 ALA E 57 SER E 63 1 7 HELIX 36 AD9 SER E 63 LEU E 71 1 9 HELIX 37 AE1 SER E 84 LYS E 98 1 15 HELIX 38 AE2 SER E 118 LYS E 132 1 15 HELIX 39 AE3 THR E 135 PHE E 143 1 9 HELIX 40 AE4 SER E 146 THR E 160 1 15 SHEET 1 AA1 5 LEU A 4 LEU A 9 0 SHEET 2 AA1 5 CYS A 42 SER A 48 1 O SER A 48 N ILE A 8 SHEET 3 AA1 5 GLY A 76 SER A 80 1 O TYR A 78 N ILE A 47 SHEET 4 AA1 5 LEU A 102 LYS A 105 1 O LYS A 105 N LEU A 79 SHEET 5 AA1 5 TYR A 110 LEU A 113 -1 O LEU A 113 N LEU A 102 SHEET 1 AA2 2 HIS A 18 ALA A 19 0 SHEET 2 AA2 2 PHE A 54 THR A 55 1 O PHE A 54 N ALA A 19 SHEET 1 AA3 3 THR A 133 VAL A 134 0 SHEET 2 AA3 3 LEU A 175 SER A 181 -1 O TYR A 179 N VAL A 134 SHEET 3 AA3 3 VAL A 163 VAL A 169 -1 N GLU A 168 O GLU A 176 SHEET 1 AA4 5 THR B 5 LEU B 9 0 SHEET 2 AA4 5 ILE B 44 SER B 48 1 O ALA B 46 N ILE B 8 SHEET 3 AA4 5 GLY B 76 SER B 80 1 O TYR B 78 N ILE B 47 SHEET 4 AA4 5 LEU B 102 LYS B 105 1 O LYS B 105 N LEU B 79 SHEET 5 AA4 5 TYR B 110 LEU B 113 -1 O LEU B 113 N LEU B 102 SHEET 1 AA5 2 HIS B 18 ALA B 19 0 SHEET 2 AA5 2 PHE B 54 THR B 55 1 O PHE B 54 N ALA B 19 SHEET 1 AA6 3 THR B 133 VAL B 134 0 SHEET 2 AA6 3 LEU B 175 SER B 181 -1 O TYR B 179 N VAL B 134 SHEET 3 AA6 3 VAL B 163 VAL B 169 -1 N GLU B 168 O GLU B 176 SHEET 1 AA7 5 LEU C 4 LEU C 9 0 SHEET 2 AA7 5 CYS C 42 SER C 48 1 O ALA C 46 N ILE C 8 SHEET 3 AA7 5 GLY C 76 SER C 80 1 O GLY C 76 N ASP C 43 SHEET 4 AA7 5 LEU C 102 LYS C 105 1 O LYS C 105 N LEU C 79 SHEET 5 AA7 5 TYR C 110 LEU C 113 -1 O LEU C 113 N LEU C 102 SHEET 1 AA8 2 HIS C 18 ALA C 19 0 SHEET 2 AA8 2 PHE C 54 THR C 55 1 O PHE C 54 N ALA C 19 SHEET 1 AA9 3 THR C 133 VAL C 134 0 SHEET 2 AA9 3 LEU C 175 SER C 181 -1 O TYR C 179 N VAL C 134 SHEET 3 AA9 3 VAL C 163 VAL C 169 -1 N GLU C 168 O GLU C 176 SHEET 1 AB1 5 THR D 5 LEU D 9 0 SHEET 2 AB1 5 ILE D 44 SER D 48 1 O ALA D 46 N ILE D 8 SHEET 3 AB1 5 GLY D 76 SER D 80 1 O TYR D 78 N ILE D 47 SHEET 4 AB1 5 LEU D 102 LYS D 105 1 O LYS D 105 N LEU D 79 SHEET 5 AB1 5 TYR D 110 LEU D 113 -1 O LEU D 113 N LEU D 102 SHEET 1 AB2 2 HIS D 18 ALA D 19 0 SHEET 2 AB2 2 PHE D 54 THR D 55 1 O PHE D 54 N ALA D 19 SHEET 1 AB3 3 THR D 133 VAL D 134 0 SHEET 2 AB3 3 LEU D 175 SER D 181 -1 O TYR D 179 N VAL D 134 SHEET 3 AB3 3 VAL D 163 VAL D 169 -1 N GLN D 166 O VAL D 178 SHEET 1 AB4 5 THR E 5 LEU E 9 0 SHEET 2 AB4 5 ILE E 44 SER E 48 1 O ALA E 46 N ILE E 8 SHEET 3 AB4 5 GLY E 76 SER E 80 1 O TYR E 78 N ILE E 47 SHEET 4 AB4 5 LEU E 102 LYS E 105 1 O LYS E 105 N LEU E 79 SHEET 5 AB4 5 TYR E 110 LEU E 113 -1 O LEU E 113 N LEU E 102 SHEET 1 AB5 2 HIS E 18 ALA E 19 0 SHEET 2 AB5 2 PHE E 54 THR E 55 1 O PHE E 54 N ALA E 19 SHEET 1 AB6 3 THR E 133 VAL E 134 0 SHEET 2 AB6 3 LEU E 175 SER E 181 -1 O TYR E 179 N VAL E 134 SHEET 3 AB6 3 VAL E 163 VAL E 169 -1 N LEU E 164 O ARG E 180 CRYST1 59.173 59.173 426.203 90.00 90.00 120.00 P 31 2 1 30 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016900 0.009757 0.000000 0.00000 SCALE2 0.000000 0.019514 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002346 0.00000 MASTER 413 0 0 40 50 0 0 6 7199 5 0 75 END