data_9ZY0 # _entry.id 9ZY0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9ZY0 pdb_00009zy0 10.2210/pdb9zy0/pdb WWPDB D_1000303406 ? ? EMDB EMD-74939 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-07-15 ? 2 'EM metadata' 1 0 2026-07-15 ? 3 'Half map' 1 0 2026-07-15 1 4 'Half map' 1 0 2026-07-15 2 5 Image 1 0 2026-07-15 ? 6 Mask 1 0 2026-07-15 1 7 'Primary map' 1 0 2026-07-15 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 Mask repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9ZY0 _pdbx_database_status.recvd_initial_deposition_date 2026-01-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of the monomeric HIV-2 Vif-human APOBEC3H-CBFbeta complex' _pdbx_database_related.db_id EMD-74939 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email jdgross@cgl.ucsf.edu _pdbx_contact_author.name_first John _pdbx_contact_author.name_last Gross _pdbx_contact_author.name_mi D. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1377-4705 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Niu, Y.' 1 ? 'Lilly, M.' 2 ? 'Ronayne, E.K.' 3 ? 'Emerman, M.' 4 ? 'Chesarino, N.M.' 5 ? 'Gross, J.D.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The structural mechanism of HIV-2 Vif antagonism of human APOBEC3H.' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-026-75045-1 _citation.pdbx_database_id_PubMed 42373647 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Niu, Y.' 1 0000-0003-1092-8972 primary 'Lilly, M.' 2 0009-0007-4549-316X primary 'Ronayne, E.K.' 3 0000-0002-7422-1872 primary 'Emerman, M.' 4 ? primary 'Chesarino, N.M.' 5 ? primary 'Gross, J.D.' 6 0000-0002-1377-4705 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Virion infectivity factor' 25044.865 1 ? ? ? ? 2 polymer man 'Core-binding factor subunit beta' 21542.188 1 ? ? ? ? 3 polymer man 'Single-stranded DNA cytosine deaminase' 21763.137 1 3.5.4.38 ? ? ? 4 polymer man ;RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*U)-3') ; 2404.369 1 ? ? ? ? 5 polymer man ;RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*A)-3') ; 2588.689 1 ? ? ? ? 6 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name ;CBF-beta,Polyomavirus enhancer-binding protein 2 beta subunit,PEA2-beta,PEBP2-beta,SL3-3 enhancer factor 1 subunit beta,SL3/AKV core-binding factor beta subunit ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MEEGKSWIVVPTWRVPGRMEKWHSLVKYLKYRTKDLEKVCYVPHHKVGWAWWTCSRVIFPLQGRSHLEIQAYWNLTPEKG WLSSYAVRITWYTEKFWTDVTPDCADSLIHGTYFSCFTAGEVRRAIRGEKLLSCCNYPQAHKSQVPSLQFLALVVVQQNG KPQRNSTTRKQWRRDYRRGLRVARQDSRGLKQRGGESPAPGAHFPGVAKVLEILA ; ;MEEGKSWIVVPTWRVPGRMEKWHSLVKYLKYRTKDLEKVCYVPHHKVGWAWWTCSRVIFPLQGRSHLEIQAYWNLTPEKG WLSSYAVRITWYTEKFWTDVTPDCADSLIHGTYFSCFTAGEVRRAIRGEKLLSCCNYPQAHKSQVPSLQFLALVVVQQNG KPQRNSTTRKQWRRDYRRGLRVARQDSRGLKQRGGESPAPGAHFPGVAKVLEILA ; A ? 2 'polypeptide(L)' no no ;MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQT PSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLDGMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSH REEMEVRVSQLLAVTGKKTTRP ; ;MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQT PSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLDGMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSH REEMEVRVSQLLAVTGKKTTRP ; B ? 3 'polypeptide(L)' no no ;MALLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYL TWSPCSSCAWELVDFIKAHDHLNLRIFASRLYYHWCKPQQDGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPY KMLEELDKNSRAIKRRLDRIKQS ; ;MALLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYL TWSPCSSCAWELVDFIKAHDHLNLRIFASRLYYHWCKPQQDGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPY KMLEELDKNSRAIKRRLDRIKQS ; C ? 4 polyribonucleotide no no UUUUUUUU UUUUUUUU D ? 5 polyribonucleotide no no AAAAAAAA AAAAAAAA E ? # _pdbx_entity_nonpoly.entity_id 6 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 GLU n 1 4 GLY n 1 5 LYS n 1 6 SER n 1 7 TRP n 1 8 ILE n 1 9 VAL n 1 10 VAL n 1 11 PRO n 1 12 THR n 1 13 TRP n 1 14 ARG n 1 15 VAL n 1 16 PRO n 1 17 GLY n 1 18 ARG n 1 19 MET n 1 20 GLU n 1 21 LYS n 1 22 TRP n 1 23 HIS n 1 24 SER n 1 25 LEU n 1 26 VAL n 1 27 LYS n 1 28 TYR n 1 29 LEU n 1 30 LYS n 1 31 TYR n 1 32 ARG n 1 33 THR n 1 34 LYS n 1 35 ASP n 1 36 LEU n 1 37 GLU n 1 38 LYS n 1 39 VAL n 1 40 CYS n 1 41 TYR n 1 42 VAL n 1 43 PRO n 1 44 HIS n 1 45 HIS n 1 46 LYS n 1 47 VAL n 1 48 GLY n 1 49 TRP n 1 50 ALA n 1 51 TRP n 1 52 TRP n 1 53 THR n 1 54 CYS n 1 55 SER n 1 56 ARG n 1 57 VAL n 1 58 ILE n 1 59 PHE n 1 60 PRO n 1 61 LEU n 1 62 GLN n 1 63 GLY n 1 64 ARG n 1 65 SER n 1 66 HIS n 1 67 LEU n 1 68 GLU n 1 69 ILE n 1 70 GLN n 1 71 ALA n 1 72 TYR n 1 73 TRP n 1 74 ASN n 1 75 LEU n 1 76 THR n 1 77 PRO n 1 78 GLU n 1 79 LYS n 1 80 GLY n 1 81 TRP n 1 82 LEU n 1 83 SER n 1 84 SER n 1 85 TYR n 1 86 ALA n 1 87 VAL n 1 88 ARG n 1 89 ILE n 1 90 THR n 1 91 TRP n 1 92 TYR n 1 93 THR n 1 94 GLU n 1 95 LYS n 1 96 PHE n 1 97 TRP n 1 98 THR n 1 99 ASP n 1 100 VAL n 1 101 THR n 1 102 PRO n 1 103 ASP n 1 104 CYS n 1 105 ALA n 1 106 ASP n 1 107 SER n 1 108 LEU n 1 109 ILE n 1 110 HIS n 1 111 GLY n 1 112 THR n 1 113 TYR n 1 114 PHE n 1 115 SER n 1 116 CYS n 1 117 PHE n 1 118 THR n 1 119 ALA n 1 120 GLY n 1 121 GLU n 1 122 VAL n 1 123 ARG n 1 124 ARG n 1 125 ALA n 1 126 ILE n 1 127 ARG n 1 128 GLY n 1 129 GLU n 1 130 LYS n 1 131 LEU n 1 132 LEU n 1 133 SER n 1 134 CYS n 1 135 CYS n 1 136 ASN n 1 137 TYR n 1 138 PRO n 1 139 GLN n 1 140 ALA n 1 141 HIS n 1 142 LYS n 1 143 SER n 1 144 GLN n 1 145 VAL n 1 146 PRO n 1 147 SER n 1 148 LEU n 1 149 GLN n 1 150 PHE n 1 151 LEU n 1 152 ALA n 1 153 LEU n 1 154 VAL n 1 155 VAL n 1 156 VAL n 1 157 GLN n 1 158 GLN n 1 159 ASN n 1 160 GLY n 1 161 LYS n 1 162 PRO n 1 163 GLN n 1 164 ARG n 1 165 ASN n 1 166 SER n 1 167 THR n 1 168 THR n 1 169 ARG n 1 170 LYS n 1 171 GLN n 1 172 TRP n 1 173 ARG n 1 174 ARG n 1 175 ASP n 1 176 TYR n 1 177 ARG n 1 178 ARG n 1 179 GLY n 1 180 LEU n 1 181 ARG n 1 182 VAL n 1 183 ALA n 1 184 ARG n 1 185 GLN n 1 186 ASP n 1 187 SER n 1 188 ARG n 1 189 GLY n 1 190 LEU n 1 191 LYS n 1 192 GLN n 1 193 ARG n 1 194 GLY n 1 195 GLY n 1 196 GLU n 1 197 SER n 1 198 PRO n 1 199 ALA n 1 200 PRO n 1 201 GLY n 1 202 ALA n 1 203 HIS n 1 204 PHE n 1 205 PRO n 1 206 GLY n 1 207 VAL n 1 208 ALA n 1 209 LYS n 1 210 VAL n 1 211 LEU n 1 212 GLU n 1 213 ILE n 1 214 LEU n 1 215 ALA n 2 1 MET n 2 2 PRO n 2 3 ARG n 2 4 VAL n 2 5 VAL n 2 6 PRO n 2 7 ASP n 2 8 GLN n 2 9 ARG n 2 10 SER n 2 11 LYS n 2 12 PHE n 2 13 GLU n 2 14 ASN n 2 15 GLU n 2 16 GLU n 2 17 PHE n 2 18 PHE n 2 19 ARG n 2 20 LYS n 2 21 LEU n 2 22 SER n 2 23 ARG n 2 24 GLU n 2 25 CYS n 2 26 GLU n 2 27 ILE n 2 28 LYS n 2 29 TYR n 2 30 THR n 2 31 GLY n 2 32 PHE n 2 33 ARG n 2 34 ASP n 2 35 ARG n 2 36 PRO n 2 37 HIS n 2 38 GLU n 2 39 GLU n 2 40 ARG n 2 41 GLN n 2 42 ALA n 2 43 ARG n 2 44 PHE n 2 45 GLN n 2 46 ASN n 2 47 ALA n 2 48 CYS n 2 49 ARG n 2 50 ASP n 2 51 GLY n 2 52 ARG n 2 53 SER n 2 54 GLU n 2 55 ILE n 2 56 ALA n 2 57 PHE n 2 58 VAL n 2 59 ALA n 2 60 THR n 2 61 GLY n 2 62 THR n 2 63 ASN n 2 64 LEU n 2 65 SER n 2 66 LEU n 2 67 GLN n 2 68 PHE n 2 69 PHE n 2 70 PRO n 2 71 ALA n 2 72 SER n 2 73 TRP n 2 74 GLN n 2 75 GLY n 2 76 GLU n 2 77 GLN n 2 78 ARG n 2 79 GLN n 2 80 THR n 2 81 PRO n 2 82 SER n 2 83 ARG n 2 84 GLU n 2 85 TYR n 2 86 VAL n 2 87 ASP n 2 88 LEU n 2 89 GLU n 2 90 ARG n 2 91 GLU n 2 92 ALA n 2 93 GLY n 2 94 LYS n 2 95 VAL n 2 96 TYR n 2 97 LEU n 2 98 LYS n 2 99 ALA n 2 100 PRO n 2 101 MET n 2 102 ILE n 2 103 LEU n 2 104 ASN n 2 105 GLY n 2 106 VAL n 2 107 CYS n 2 108 VAL n 2 109 ILE n 2 110 TRP n 2 111 LYS n 2 112 GLY n 2 113 TRP n 2 114 ILE n 2 115 ASP n 2 116 LEU n 2 117 GLN n 2 118 ARG n 2 119 LEU n 2 120 ASP n 2 121 GLY n 2 122 MET n 2 123 GLY n 2 124 CYS n 2 125 LEU n 2 126 GLU n 2 127 PHE n 2 128 ASP n 2 129 GLU n 2 130 GLU n 2 131 ARG n 2 132 ALA n 2 133 GLN n 2 134 GLN n 2 135 GLU n 2 136 ASP n 2 137 ALA n 2 138 LEU n 2 139 ALA n 2 140 GLN n 2 141 GLN n 2 142 ALA n 2 143 PHE n 2 144 GLU n 2 145 GLU n 2 146 ALA n 2 147 ARG n 2 148 ARG n 2 149 ARG n 2 150 THR n 2 151 ARG n 2 152 GLU n 2 153 PHE n 2 154 GLU n 2 155 ASP n 2 156 ARG n 2 157 ASP n 2 158 ARG n 2 159 SER n 2 160 HIS n 2 161 ARG n 2 162 GLU n 2 163 GLU n 2 164 MET n 2 165 GLU n 2 166 VAL n 2 167 ARG n 2 168 VAL n 2 169 SER n 2 170 GLN n 2 171 LEU n 2 172 LEU n 2 173 ALA n 2 174 VAL n 2 175 THR n 2 176 GLY n 2 177 LYS n 2 178 LYS n 2 179 THR n 2 180 THR n 2 181 ARG n 2 182 PRO n 3 1 MET n 3 2 ALA n 3 3 LEU n 3 4 LEU n 3 5 THR n 3 6 ALA n 3 7 GLU n 3 8 THR n 3 9 PHE n 3 10 ARG n 3 11 LEU n 3 12 GLN n 3 13 PHE n 3 14 ASN n 3 15 ASN n 3 16 LYS n 3 17 ARG n 3 18 ARG n 3 19 LEU n 3 20 ARG n 3 21 ARG n 3 22 PRO n 3 23 TYR n 3 24 TYR n 3 25 PRO n 3 26 ARG n 3 27 LYS n 3 28 ALA n 3 29 LEU n 3 30 LEU n 3 31 CYS n 3 32 TYR n 3 33 GLN n 3 34 LEU n 3 35 THR n 3 36 PRO n 3 37 GLN n 3 38 ASN n 3 39 GLY n 3 40 SER n 3 41 THR n 3 42 PRO n 3 43 THR n 3 44 ARG n 3 45 GLY n 3 46 TYR n 3 47 PHE n 3 48 GLU n 3 49 ASN n 3 50 LYS n 3 51 LYS n 3 52 LYS n 3 53 CYS n 3 54 HIS n 3 55 ALA n 3 56 GLU n 3 57 ILE n 3 58 CYS n 3 59 PHE n 3 60 ILE n 3 61 ASN n 3 62 GLU n 3 63 ILE n 3 64 LYS n 3 65 SER n 3 66 MET n 3 67 GLY n 3 68 LEU n 3 69 ASP n 3 70 GLU n 3 71 THR n 3 72 GLN n 3 73 CYS n 3 74 TYR n 3 75 GLN n 3 76 VAL n 3 77 THR n 3 78 CYS n 3 79 TYR n 3 80 LEU n 3 81 THR n 3 82 TRP n 3 83 SER n 3 84 PRO n 3 85 CYS n 3 86 SER n 3 87 SER n 3 88 CYS n 3 89 ALA n 3 90 TRP n 3 91 GLU n 3 92 LEU n 3 93 VAL n 3 94 ASP n 3 95 PHE n 3 96 ILE n 3 97 LYS n 3 98 ALA n 3 99 HIS n 3 100 ASP n 3 101 HIS n 3 102 LEU n 3 103 ASN n 3 104 LEU n 3 105 ARG n 3 106 ILE n 3 107 PHE n 3 108 ALA n 3 109 SER n 3 110 ARG n 3 111 LEU n 3 112 TYR n 3 113 TYR n 3 114 HIS n 3 115 TRP n 3 116 CYS n 3 117 LYS n 3 118 PRO n 3 119 GLN n 3 120 GLN n 3 121 ASP n 3 122 GLY n 3 123 LEU n 3 124 ARG n 3 125 LEU n 3 126 LEU n 3 127 CYS n 3 128 GLY n 3 129 SER n 3 130 GLN n 3 131 VAL n 3 132 PRO n 3 133 VAL n 3 134 GLU n 3 135 VAL n 3 136 MET n 3 137 GLY n 3 138 PHE n 3 139 PRO n 3 140 GLU n 3 141 PHE n 3 142 ALA n 3 143 ASP n 3 144 CYS n 3 145 TRP n 3 146 GLU n 3 147 ASN n 3 148 PHE n 3 149 VAL n 3 150 ASP n 3 151 HIS n 3 152 GLU n 3 153 LYS n 3 154 PRO n 3 155 LEU n 3 156 SER n 3 157 PHE n 3 158 ASN n 3 159 PRO n 3 160 TYR n 3 161 LYS n 3 162 MET n 3 163 LEU n 3 164 GLU n 3 165 GLU n 3 166 LEU n 3 167 ASP n 3 168 LYS n 3 169 ASN n 3 170 SER n 3 171 ARG n 3 172 ALA n 3 173 ILE n 3 174 LYS n 3 175 ARG n 3 176 ARG n 3 177 LEU n 3 178 ASP n 3 179 ARG n 3 180 ILE n 3 181 LYS n 3 182 GLN n 3 183 SER n 4 1 U n 4 2 U n 4 3 U n 4 4 U n 4 5 U n 4 6 U n 4 7 U n 4 8 U n 5 1 A n 5 2 A n 5 3 A n 5 4 A n 5 5 A n 5 6 A n 5 7 A n 5 8 A n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 215 ? ? vif ? ? ? ? ? ? 'Human immunodeficiency virus 2' 11709 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 182 human ? CBFB ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 183 human ? APOBEC3H ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 'Biological sequence' 1 8 ? ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 5 1 sample 'Biological sequence' 1 8 ? ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 TRP 7 7 7 TRP TRP A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 TRP 13 13 13 TRP TRP A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 MET 19 19 19 MET MET A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 TRP 49 49 49 TRP TRP A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 TRP 51 51 51 TRP TRP A . n A 1 52 TRP 52 52 52 TRP TRP A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 TRP 73 73 73 TRP TRP A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 TRP 81 81 81 TRP TRP A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 TRP 91 91 91 TRP TRP A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 TRP 97 97 97 TRP TRP A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 CYS 104 104 104 CYS CYS A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 HIS 110 110 110 HIS HIS A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 CYS 116 116 116 CYS CYS A . n A 1 117 PHE 117 117 117 PHE PHE A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 CYS 134 134 134 CYS CYS A . n A 1 135 CYS 135 135 135 CYS CYS A . n A 1 136 ASN 136 136 136 ASN ASN A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 HIS 141 141 141 HIS HIS A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 GLN 149 149 149 GLN GLN A . n A 1 150 PHE 150 150 150 PHE PHE A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 GLY 160 160 160 GLY GLY A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 PRO 162 162 ? ? ? A . n A 1 163 GLN 163 163 ? ? ? A . n A 1 164 ARG 164 164 ? ? ? A . n A 1 165 ASN 165 165 ? ? ? A . n A 1 166 SER 166 166 ? ? ? A . n A 1 167 THR 167 167 ? ? ? A . n A 1 168 THR 168 168 ? ? ? A . n A 1 169 ARG 169 169 ? ? ? A . n A 1 170 LYS 170 170 ? ? ? A . n A 1 171 GLN 171 171 ? ? ? A . n A 1 172 TRP 172 172 ? ? ? A . n A 1 173 ARG 173 173 ? ? ? A . n A 1 174 ARG 174 174 ? ? ? A . n A 1 175 ASP 175 175 ? ? ? A . n A 1 176 TYR 176 176 ? ? ? A . n A 1 177 ARG 177 177 ? ? ? A . n A 1 178 ARG 178 178 ? ? ? A . n A 1 179 GLY 179 179 ? ? ? A . n A 1 180 LEU 180 180 ? ? ? A . n A 1 181 ARG 181 181 ? ? ? A . n A 1 182 VAL 182 182 ? ? ? A . n A 1 183 ALA 183 183 ? ? ? A . n A 1 184 ARG 184 184 ? ? ? A . n A 1 185 GLN 185 185 ? ? ? A . n A 1 186 ASP 186 186 ? ? ? A . n A 1 187 SER 187 187 ? ? ? A . n A 1 188 ARG 188 188 ? ? ? A . n A 1 189 GLY 189 189 ? ? ? A . n A 1 190 LEU 190 190 ? ? ? A . n A 1 191 LYS 191 191 ? ? ? A . n A 1 192 GLN 192 192 ? ? ? A . n A 1 193 ARG 193 193 ? ? ? A . n A 1 194 GLY 194 194 ? ? ? A . n A 1 195 GLY 195 195 ? ? ? A . n A 1 196 GLU 196 196 ? ? ? A . n A 1 197 SER 197 197 ? ? ? A . n A 1 198 PRO 198 198 ? ? ? A . n A 1 199 ALA 199 199 ? ? ? A . n A 1 200 PRO 200 200 ? ? ? A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 PHE 204 204 204 PHE PHE A . n A 1 205 PRO 205 205 205 PRO PRO A . n A 1 206 GLY 206 206 206 GLY GLY A . n A 1 207 VAL 207 207 207 VAL VAL A . n A 1 208 ALA 208 208 208 ALA ALA A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 ILE 213 213 213 ILE ILE A . n A 1 214 LEU 214 214 214 LEU LEU A . n A 1 215 ALA 215 215 215 ALA ALA A . n B 2 1 MET 1 1 ? ? ? B . n B 2 2 PRO 2 2 ? ? ? B . n B 2 3 ARG 3 3 ? ? ? B . n B 2 4 VAL 4 4 ? ? ? B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 PRO 6 6 6 PRO PRO B . n B 2 7 ASP 7 7 7 ASP ASP B . n B 2 8 GLN 8 8 8 GLN GLN B . n B 2 9 ARG 9 9 9 ARG ARG B . n B 2 10 SER 10 10 10 SER SER B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 PHE 12 12 12 PHE PHE B . n B 2 13 GLU 13 13 13 GLU GLU B . n B 2 14 ASN 14 14 14 ASN ASN B . n B 2 15 GLU 15 15 15 GLU GLU B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 PHE 17 17 17 PHE PHE B . n B 2 18 PHE 18 18 18 PHE PHE B . n B 2 19 ARG 19 19 19 ARG ARG B . n B 2 20 LYS 20 20 20 LYS LYS B . n B 2 21 LEU 21 21 21 LEU LEU B . n B 2 22 SER 22 22 22 SER SER B . n B 2 23 ARG 23 23 23 ARG ARG B . n B 2 24 GLU 24 24 24 GLU GLU B . n B 2 25 CYS 25 25 25 CYS CYS B . n B 2 26 GLU 26 26 26 GLU GLU B . n B 2 27 ILE 27 27 27 ILE ILE B . n B 2 28 LYS 28 28 28 LYS LYS B . n B 2 29 TYR 29 29 29 TYR TYR B . n B 2 30 THR 30 30 30 THR THR B . n B 2 31 GLY 31 31 31 GLY GLY B . n B 2 32 PHE 32 32 32 PHE PHE B . n B 2 33 ARG 33 33 33 ARG ARG B . n B 2 34 ASP 34 34 34 ASP ASP B . n B 2 35 ARG 35 35 35 ARG ARG B . n B 2 36 PRO 36 36 36 PRO PRO B . n B 2 37 HIS 37 37 37 HIS HIS B . n B 2 38 GLU 38 38 38 GLU GLU B . n B 2 39 GLU 39 39 39 GLU GLU B . n B 2 40 ARG 40 40 40 ARG ARG B . n B 2 41 GLN 41 41 41 GLN GLN B . n B 2 42 ALA 42 42 42 ALA ALA B . n B 2 43 ARG 43 43 43 ARG ARG B . n B 2 44 PHE 44 44 44 PHE PHE B . n B 2 45 GLN 45 45 45 GLN GLN B . n B 2 46 ASN 46 46 46 ASN ASN B . n B 2 47 ALA 47 47 47 ALA ALA B . n B 2 48 CYS 48 48 48 CYS CYS B . n B 2 49 ARG 49 49 49 ARG ARG B . n B 2 50 ASP 50 50 50 ASP ASP B . n B 2 51 GLY 51 51 51 GLY GLY B . n B 2 52 ARG 52 52 52 ARG ARG B . n B 2 53 SER 53 53 53 SER SER B . n B 2 54 GLU 54 54 54 GLU GLU B . n B 2 55 ILE 55 55 55 ILE ILE B . n B 2 56 ALA 56 56 56 ALA ALA B . n B 2 57 PHE 57 57 57 PHE PHE B . n B 2 58 VAL 58 58 58 VAL VAL B . n B 2 59 ALA 59 59 59 ALA ALA B . n B 2 60 THR 60 60 60 THR THR B . n B 2 61 GLY 61 61 61 GLY GLY B . n B 2 62 THR 62 62 62 THR THR B . n B 2 63 ASN 63 63 63 ASN ASN B . n B 2 64 LEU 64 64 64 LEU LEU B . n B 2 65 SER 65 65 65 SER SER B . n B 2 66 LEU 66 66 66 LEU LEU B . n B 2 67 GLN 67 67 67 GLN GLN B . n B 2 68 PHE 68 68 68 PHE PHE B . n B 2 69 PHE 69 69 69 PHE PHE B . n B 2 70 PRO 70 70 70 PRO PRO B . n B 2 71 ALA 71 71 71 ALA ALA B . n B 2 72 SER 72 72 72 SER SER B . n B 2 73 TRP 73 73 73 TRP TRP B . n B 2 74 GLN 74 74 74 GLN GLN B . n B 2 75 GLY 75 75 75 GLY GLY B . n B 2 76 GLU 76 76 76 GLU GLU B . n B 2 77 GLN 77 77 77 GLN GLN B . n B 2 78 ARG 78 78 78 ARG ARG B . n B 2 79 GLN 79 79 79 GLN GLN B . n B 2 80 THR 80 80 80 THR THR B . n B 2 81 PRO 81 81 81 PRO PRO B . n B 2 82 SER 82 82 82 SER SER B . n B 2 83 ARG 83 83 83 ARG ARG B . n B 2 84 GLU 84 84 84 GLU GLU B . n B 2 85 TYR 85 85 85 TYR TYR B . n B 2 86 VAL 86 86 86 VAL VAL B . n B 2 87 ASP 87 87 87 ASP ASP B . n B 2 88 LEU 88 88 88 LEU LEU B . n B 2 89 GLU 89 89 89 GLU GLU B . n B 2 90 ARG 90 90 90 ARG ARG B . n B 2 91 GLU 91 91 91 GLU GLU B . n B 2 92 ALA 92 92 92 ALA ALA B . n B 2 93 GLY 93 93 93 GLY GLY B . n B 2 94 LYS 94 94 94 LYS LYS B . n B 2 95 VAL 95 95 95 VAL VAL B . n B 2 96 TYR 96 96 96 TYR TYR B . n B 2 97 LEU 97 97 97 LEU LEU B . n B 2 98 LYS 98 98 98 LYS LYS B . n B 2 99 ALA 99 99 99 ALA ALA B . n B 2 100 PRO 100 100 100 PRO PRO B . n B 2 101 MET 101 101 101 MET MET B . n B 2 102 ILE 102 102 102 ILE ILE B . n B 2 103 LEU 103 103 103 LEU LEU B . n B 2 104 ASN 104 104 104 ASN ASN B . n B 2 105 GLY 105 105 105 GLY GLY B . n B 2 106 VAL 106 106 106 VAL VAL B . n B 2 107 CYS 107 107 107 CYS CYS B . n B 2 108 VAL 108 108 108 VAL VAL B . n B 2 109 ILE 109 109 109 ILE ILE B . n B 2 110 TRP 110 110 110 TRP TRP B . n B 2 111 LYS 111 111 111 LYS LYS B . n B 2 112 GLY 112 112 112 GLY GLY B . n B 2 113 TRP 113 113 113 TRP TRP B . n B 2 114 ILE 114 114 114 ILE ILE B . n B 2 115 ASP 115 115 115 ASP ASP B . n B 2 116 LEU 116 116 116 LEU LEU B . n B 2 117 GLN 117 117 117 GLN GLN B . n B 2 118 ARG 118 118 118 ARG ARG B . n B 2 119 LEU 119 119 119 LEU LEU B . n B 2 120 ASP 120 120 120 ASP ASP B . n B 2 121 GLY 121 121 121 GLY GLY B . n B 2 122 MET 122 122 122 MET MET B . n B 2 123 GLY 123 123 123 GLY GLY B . n B 2 124 CYS 124 124 124 CYS CYS B . n B 2 125 LEU 125 125 125 LEU LEU B . n B 2 126 GLU 126 126 126 GLU GLU B . n B 2 127 PHE 127 127 127 PHE PHE B . n B 2 128 ASP 128 128 128 ASP ASP B . n B 2 129 GLU 129 129 129 GLU GLU B . n B 2 130 GLU 130 130 130 GLU GLU B . n B 2 131 ARG 131 131 131 ARG ARG B . n B 2 132 ALA 132 132 132 ALA ALA B . n B 2 133 GLN 133 133 133 GLN GLN B . n B 2 134 GLN 134 134 134 GLN GLN B . n B 2 135 GLU 135 135 135 GLU GLU B . n B 2 136 ASP 136 136 136 ASP ASP B . n B 2 137 ALA 137 137 137 ALA ALA B . n B 2 138 LEU 138 138 138 LEU LEU B . n B 2 139 ALA 139 139 139 ALA ALA B . n B 2 140 GLN 140 140 140 GLN GLN B . n B 2 141 GLN 141 141 141 GLN GLN B . n B 2 142 ALA 142 142 142 ALA ALA B . n B 2 143 PHE 143 143 143 PHE PHE B . n B 2 144 GLU 144 144 144 GLU GLU B . n B 2 145 GLU 145 145 145 GLU GLU B . n B 2 146 ALA 146 146 146 ALA ALA B . n B 2 147 ARG 147 147 147 ARG ARG B . n B 2 148 ARG 148 148 148 ARG ARG B . n B 2 149 ARG 149 149 149 ARG ARG B . n B 2 150 THR 150 150 150 THR THR B . n B 2 151 ARG 151 151 151 ARG ARG B . n B 2 152 GLU 152 152 152 GLU GLU B . n B 2 153 PHE 153 153 153 PHE PHE B . n B 2 154 GLU 154 154 154 GLU GLU B . n B 2 155 ASP 155 155 ? ? ? B . n B 2 156 ARG 156 156 ? ? ? B . n B 2 157 ASP 157 157 ? ? ? B . n B 2 158 ARG 158 158 ? ? ? B . n B 2 159 SER 159 159 ? ? ? B . n B 2 160 HIS 160 160 ? ? ? B . n B 2 161 ARG 161 161 ? ? ? B . n B 2 162 GLU 162 162 ? ? ? B . n B 2 163 GLU 163 163 ? ? ? B . n B 2 164 MET 164 164 ? ? ? B . n B 2 165 GLU 165 165 ? ? ? B . n B 2 166 VAL 166 166 ? ? ? B . n B 2 167 ARG 167 167 ? ? ? B . n B 2 168 VAL 168 168 ? ? ? B . n B 2 169 SER 169 169 ? ? ? B . n B 2 170 GLN 170 170 ? ? ? B . n B 2 171 LEU 171 171 ? ? ? B . n B 2 172 LEU 172 172 ? ? ? B . n B 2 173 ALA 173 173 ? ? ? B . n B 2 174 VAL 174 174 ? ? ? B . n B 2 175 THR 175 175 ? ? ? B . n B 2 176 GLY 176 176 ? ? ? B . n B 2 177 LYS 177 177 ? ? ? B . n B 2 178 LYS 178 178 ? ? ? B . n B 2 179 THR 179 179 ? ? ? B . n B 2 180 THR 180 180 ? ? ? B . n B 2 181 ARG 181 181 ? ? ? B . n B 2 182 PRO 182 182 ? ? ? B . n C 3 1 MET 1 1 1 MET MET C . n C 3 2 ALA 2 2 2 ALA ALA C . n C 3 3 LEU 3 3 3 LEU LEU C . n C 3 4 LEU 4 4 4 LEU LEU C . n C 3 5 THR 5 5 5 THR THR C . n C 3 6 ALA 6 6 6 ALA ALA C . n C 3 7 GLU 7 7 7 GLU GLU C . n C 3 8 THR 8 8 8 THR THR C . n C 3 9 PHE 9 9 9 PHE PHE C . n C 3 10 ARG 10 10 10 ARG ARG C . n C 3 11 LEU 11 11 11 LEU LEU C . n C 3 12 GLN 12 12 12 GLN GLN C . n C 3 13 PHE 13 13 13 PHE PHE C . n C 3 14 ASN 14 14 14 ASN ASN C . n C 3 15 ASN 15 15 15 ASN ASN C . n C 3 16 LYS 16 16 16 LYS LYS C . n C 3 17 ARG 17 17 17 ARG ARG C . n C 3 18 ARG 18 18 18 ARG ARG C . n C 3 19 LEU 19 19 19 LEU LEU C . n C 3 20 ARG 20 20 20 ARG ARG C . n C 3 21 ARG 21 21 21 ARG ARG C . n C 3 22 PRO 22 22 22 PRO PRO C . n C 3 23 TYR 23 23 23 TYR TYR C . n C 3 24 TYR 24 24 24 TYR TYR C . n C 3 25 PRO 25 25 25 PRO PRO C . n C 3 26 ARG 26 26 26 ARG ARG C . n C 3 27 LYS 27 27 27 LYS LYS C . n C 3 28 ALA 28 28 28 ALA ALA C . n C 3 29 LEU 29 29 29 LEU LEU C . n C 3 30 LEU 30 30 30 LEU LEU C . n C 3 31 CYS 31 31 31 CYS CYS C . n C 3 32 TYR 32 32 32 TYR TYR C . n C 3 33 GLN 33 33 33 GLN GLN C . n C 3 34 LEU 34 34 34 LEU LEU C . n C 3 35 THR 35 35 35 THR THR C . n C 3 36 PRO 36 36 36 PRO PRO C . n C 3 37 GLN 37 37 37 GLN GLN C . n C 3 38 ASN 38 38 38 ASN ASN C . n C 3 39 GLY 39 39 39 GLY GLY C . n C 3 40 SER 40 40 40 SER SER C . n C 3 41 THR 41 41 41 THR THR C . n C 3 42 PRO 42 42 42 PRO PRO C . n C 3 43 THR 43 43 43 THR THR C . n C 3 44 ARG 44 44 44 ARG ARG C . n C 3 45 GLY 45 45 45 GLY GLY C . n C 3 46 TYR 46 46 46 TYR TYR C . n C 3 47 PHE 47 47 47 PHE PHE C . n C 3 48 GLU 48 48 48 GLU GLU C . n C 3 49 ASN 49 49 49 ASN ASN C . n C 3 50 LYS 50 50 50 LYS LYS C . n C 3 51 LYS 51 51 51 LYS LYS C . n C 3 52 LYS 52 52 52 LYS LYS C . n C 3 53 CYS 53 53 53 CYS CYS C . n C 3 54 HIS 54 54 54 HIS HIS C . n C 3 55 ALA 55 55 55 ALA ALA C . n C 3 56 GLU 56 56 56 GLU GLU C . n C 3 57 ILE 57 57 57 ILE ILE C . n C 3 58 CYS 58 58 58 CYS CYS C . n C 3 59 PHE 59 59 59 PHE PHE C . n C 3 60 ILE 60 60 60 ILE ILE C . n C 3 61 ASN 61 61 61 ASN ASN C . n C 3 62 GLU 62 62 62 GLU GLU C . n C 3 63 ILE 63 63 63 ILE ILE C . n C 3 64 LYS 64 64 64 LYS LYS C . n C 3 65 SER 65 65 65 SER SER C . n C 3 66 MET 66 66 66 MET MET C . n C 3 67 GLY 67 67 67 GLY GLY C . n C 3 68 LEU 68 68 68 LEU LEU C . n C 3 69 ASP 69 69 69 ASP ASP C . n C 3 70 GLU 70 70 70 GLU GLU C . n C 3 71 THR 71 71 71 THR THR C . n C 3 72 GLN 72 72 72 GLN GLN C . n C 3 73 CYS 73 73 73 CYS CYS C . n C 3 74 TYR 74 74 74 TYR TYR C . n C 3 75 GLN 75 75 75 GLN GLN C . n C 3 76 VAL 76 76 76 VAL VAL C . n C 3 77 THR 77 77 77 THR THR C . n C 3 78 CYS 78 78 78 CYS CYS C . n C 3 79 TYR 79 79 79 TYR TYR C . n C 3 80 LEU 80 80 80 LEU LEU C . n C 3 81 THR 81 81 81 THR THR C . n C 3 82 TRP 82 82 82 TRP TRP C . n C 3 83 SER 83 83 83 SER SER C . n C 3 84 PRO 84 84 84 PRO PRO C . n C 3 85 CYS 85 85 85 CYS CYS C . n C 3 86 SER 86 86 86 SER SER C . n C 3 87 SER 87 87 87 SER SER C . n C 3 88 CYS 88 88 88 CYS CYS C . n C 3 89 ALA 89 89 89 ALA ALA C . n C 3 90 TRP 90 90 90 TRP TRP C . n C 3 91 GLU 91 91 91 GLU GLU C . n C 3 92 LEU 92 92 92 LEU LEU C . n C 3 93 VAL 93 93 93 VAL VAL C . n C 3 94 ASP 94 94 94 ASP ASP C . n C 3 95 PHE 95 95 95 PHE PHE C . n C 3 96 ILE 96 96 96 ILE ILE C . n C 3 97 LYS 97 97 97 LYS LYS C . n C 3 98 ALA 98 98 98 ALA ALA C . n C 3 99 HIS 99 99 99 HIS HIS C . n C 3 100 ASP 100 100 100 ASP ASP C . n C 3 101 HIS 101 101 101 HIS HIS C . n C 3 102 LEU 102 102 102 LEU LEU C . n C 3 103 ASN 103 103 103 ASN ASN C . n C 3 104 LEU 104 104 104 LEU LEU C . n C 3 105 ARG 105 105 105 ARG ARG C . n C 3 106 ILE 106 106 106 ILE ILE C . n C 3 107 PHE 107 107 107 PHE PHE C . n C 3 108 ALA 108 108 108 ALA ALA C . n C 3 109 SER 109 109 109 SER SER C . n C 3 110 ARG 110 110 110 ARG ARG C . n C 3 111 LEU 111 111 111 LEU LEU C . n C 3 112 TYR 112 112 112 TYR TYR C . n C 3 113 TYR 113 113 113 TYR TYR C . n C 3 114 HIS 114 114 114 HIS HIS C . n C 3 115 TRP 115 115 115 TRP TRP C . n C 3 116 CYS 116 116 116 CYS CYS C . n C 3 117 LYS 117 117 117 LYS LYS C . n C 3 118 PRO 118 118 118 PRO PRO C . n C 3 119 GLN 119 119 119 GLN GLN C . n C 3 120 GLN 120 120 120 GLN GLN C . n C 3 121 ASP 121 121 121 ASP ASP C . n C 3 122 GLY 122 122 122 GLY GLY C . n C 3 123 LEU 123 123 123 LEU LEU C . n C 3 124 ARG 124 124 124 ARG ARG C . n C 3 125 LEU 125 125 125 LEU LEU C . n C 3 126 LEU 126 126 126 LEU LEU C . n C 3 127 CYS 127 127 127 CYS CYS C . n C 3 128 GLY 128 128 128 GLY GLY C . n C 3 129 SER 129 129 129 SER SER C . n C 3 130 GLN 130 130 130 GLN GLN C . n C 3 131 VAL 131 131 131 VAL VAL C . n C 3 132 PRO 132 132 132 PRO PRO C . n C 3 133 VAL 133 133 133 VAL VAL C . n C 3 134 GLU 134 134 134 GLU GLU C . n C 3 135 VAL 135 135 135 VAL VAL C . n C 3 136 MET 136 136 136 MET MET C . n C 3 137 GLY 137 137 137 GLY GLY C . n C 3 138 PHE 138 138 138 PHE PHE C . n C 3 139 PRO 139 139 139 PRO PRO C . n C 3 140 GLU 140 140 140 GLU GLU C . n C 3 141 PHE 141 141 141 PHE PHE C . n C 3 142 ALA 142 142 142 ALA ALA C . n C 3 143 ASP 143 143 143 ASP ASP C . n C 3 144 CYS 144 144 144 CYS CYS C . n C 3 145 TRP 145 145 145 TRP TRP C . n C 3 146 GLU 146 146 146 GLU GLU C . n C 3 147 ASN 147 147 147 ASN ASN C . n C 3 148 PHE 148 148 148 PHE PHE C . n C 3 149 VAL 149 149 149 VAL VAL C . n C 3 150 ASP 150 150 150 ASP ASP C . n C 3 151 HIS 151 151 151 HIS HIS C . n C 3 152 GLU 152 152 152 GLU GLU C . n C 3 153 LYS 153 153 153 LYS LYS C . n C 3 154 PRO 154 154 154 PRO PRO C . n C 3 155 LEU 155 155 155 LEU LEU C . n C 3 156 SER 156 156 156 SER SER C . n C 3 157 PHE 157 157 157 PHE PHE C . n C 3 158 ASN 158 158 158 ASN ASN C . n C 3 159 PRO 159 159 159 PRO PRO C . n C 3 160 TYR 160 160 160 TYR TYR C . n C 3 161 LYS 161 161 161 LYS LYS C . n C 3 162 MET 162 162 162 MET MET C . n C 3 163 LEU 163 163 163 LEU LEU C . n C 3 164 GLU 164 164 164 GLU GLU C . n C 3 165 GLU 165 165 165 GLU GLU C . n C 3 166 LEU 166 166 166 LEU LEU C . n C 3 167 ASP 167 167 167 ASP ASP C . n C 3 168 LYS 168 168 168 LYS LYS C . n C 3 169 ASN 169 169 169 ASN ASN C . n C 3 170 SER 170 170 170 SER SER C . n C 3 171 ARG 171 171 171 ARG ARG C . n C 3 172 ALA 172 172 172 ALA ALA C . n C 3 173 ILE 173 173 173 ILE ILE C . n C 3 174 LYS 174 174 174 LYS LYS C . n C 3 175 ARG 175 175 175 ARG ARG C . n C 3 176 ARG 176 176 176 ARG ARG C . n C 3 177 LEU 177 177 177 LEU LEU C . n C 3 178 ASP 178 178 178 ASP ASP C . n C 3 179 ARG 179 179 179 ARG ARG C . n C 3 180 ILE 180 180 180 ILE ILE C . n C 3 181 LYS 181 181 181 LYS LYS C . n C 3 182 GLN 182 182 182 GLN GLN C . n C 3 183 SER 183 183 183 SER SER C . n D 4 1 U 1 1 1 U U D . n D 4 2 U 2 2 2 U U D . n D 4 3 U 3 3 3 U U D . n D 4 4 U 4 4 4 U U D . n D 4 5 U 5 5 5 U U D . n D 4 6 U 6 6 6 U U D . n D 4 7 U 7 7 7 U U D . n D 4 8 U 8 8 8 U U D . n E 5 1 A 1 7 7 A A E . n E 5 2 A 2 8 8 A A E . n E 5 3 A 3 9 9 A A E . n E 5 4 A 4 10 10 A A E . n E 5 5 A 5 11 11 A A E . n E 5 6 A 6 12 12 A A E . n E 5 7 A 7 13 13 A A E . n E 5 8 A 8 14 14 A A E . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 ZN 1 301 2 ZN ZN A . G 6 ZN 1 201 1 ZN ZN C . # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9ZY0 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9ZY0 _struct.title 'Cryo-EM structure of the monomeric HIV-2 Vif-human APOBEC3H-CBFbeta complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9ZY0 _struct_keywords.text 'HIV-2, Vif, APOBEC3H, Antagonism, Ubiquitination, ANTIVIRAL PROTEIN, ANTIVIRAL PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'ANTIVIRAL PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q9YTT9_9HIV2 Q9YTT9 ? 1 ;MEEGKSWIVVPTWRVPGRMEKWHSLVKYLKYRTKDLEKVCYVPHHKVGWAWWTCSRVIFPLQGRSHLEIQAYWNLTPEKG WLSSYAVRITWYTEKFWTDVTPDCADSLIHGTYFSCFTAGEVRRAIRGEKLLSCCNYPQAHKSQVPSLQFLALVVVQQNG KPQRNSTTRKQWRRDYRRGLRVARQDSRGLKQRGGESPAPGAHFPGVAKVLEILA ; 1 2 UNP PEBB_HUMAN Q13951 ? 2 ;MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQT PSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLDGMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSH REEMEVRVSQLLAVTGKKTTRP ; 1 3 UNP B7TQM6_HUMAN B7TQM6 ? 3 ;MALLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYL TWSPCSSCAWELVDFIKAHDHLNLRIFASRLYYHWCKPQQDGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPY KMLEELDKNSRAIKRRLDRIKQS ; 1 4 PDB 9ZY0 9ZY0 ? 4 ? 1 5 PDB 9ZY0 9ZY0 ? 5 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9ZY0 A 1 ? 215 ? Q9YTT9 1 ? 215 ? 1 215 2 2 9ZY0 B 1 ? 182 ? Q13951 1 ? 182 ? 1 182 3 3 9ZY0 C 1 ? 183 ? B7TQM6 1 ? 183 ? 1 183 4 4 9ZY0 D 1 ? 8 ? 9ZY0 1 ? 8 ? 1 8 5 5 9ZY0 E 1 ? 8 ? 9ZY0 7 ? 14 ? 7 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 MET A 19 ? ARG A 32 ? MET A 19 ARG A 32 1 ? 14 HELX_P HELX_P2 AA2 PRO A 43 ? VAL A 47 ? PRO A 43 VAL A 47 5 ? 5 HELX_P HELX_P3 AA3 THR A 101 ? HIS A 110 ? THR A 101 HIS A 110 1 ? 10 HELX_P HELX_P4 AA4 THR A 118 ? GLY A 128 ? THR A 118 GLY A 128 1 ? 11 HELX_P HELX_P5 AA5 TYR A 137 ? LYS A 142 ? TYR A 137 LYS A 142 5 ? 6 HELX_P HELX_P6 AA6 SER A 147 ? GLY A 160 ? SER A 147 GLY A 160 1 ? 14 HELX_P HELX_P7 AA7 GLY A 206 ? LEU A 211 ? GLY A 206 LEU A 211 1 ? 6 HELX_P HELX_P8 AA8 PRO B 6 ? GLU B 15 ? PRO B 6 GLU B 15 1 ? 10 HELX_P HELX_P9 AA9 GLU B 15 ? ARG B 23 ? GLU B 15 ARG B 23 1 ? 9 HELX_P HELX_P10 AB1 PRO B 36 ? ASP B 50 ? PRO B 36 ASP B 50 1 ? 15 HELX_P HELX_P11 AB2 SER B 82 ? GLU B 84 ? SER B 82 GLU B 84 5 ? 3 HELX_P HELX_P12 AB3 ASP B 128 ? GLU B 135 ? ASP B 128 GLU B 135 1 ? 8 HELX_P HELX_P13 AB4 ASP B 136 ? ARG B 149 ? ASP B 136 ARG B 149 1 ? 14 HELX_P HELX_P14 AB5 THR C 5 ? PHE C 13 ? THR C 5 PHE C 13 1 ? 9 HELX_P HELX_P15 AB6 HIS C 54 ? GLY C 67 ? HIS C 54 GLY C 67 1 ? 14 HELX_P HELX_P16 AB7 CYS C 85 ? HIS C 99 ? CYS C 85 HIS C 99 1 ? 15 HELX_P HELX_P17 AB8 CYS C 116 ? SER C 129 ? CYS C 116 SER C 129 1 ? 14 HELX_P HELX_P18 AB9 GLY C 137 ? PHE C 148 ? GLY C 137 PHE C 148 1 ? 12 HELX_P HELX_P19 AC1 ASN C 158 ? SER C 183 ? ASN C 158 SER C 183 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 110 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 110 A ZN 301 1_555 ? ? ? ? ? ? ? 2.313 ? ? metalc2 metalc ? ? A CYS 116 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 116 A ZN 301 1_555 ? ? ? ? ? ? ? 2.308 ? ? metalc3 metalc ? ? A CYS 135 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 135 A ZN 301 1_555 ? ? ? ? ? ? ? 2.310 ? ? hydrog1 hydrog ? ? D U 2 N3 ? ? ? 1_555 E A 8 N1 ? ? D U 2 E A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? D U 2 O4 ? ? ? 1_555 E A 8 N6 ? ? D U 2 E A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D U 3 N3 ? ? ? 1_555 E A 7 N1 ? ? D U 3 E A 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D U 3 O4 ? ? ? 1_555 E A 7 N6 ? ? D U 3 E A 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D U 4 N3 ? ? ? 1_555 E A 6 N1 ? ? D U 4 E A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D U 4 O4 ? ? ? 1_555 E A 6 N6 ? ? D U 4 E A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D U 5 N3 ? ? ? 1_555 E A 5 N1 ? ? D U 5 E A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D U 5 O4 ? ? ? 1_555 E A 5 N6 ? ? D U 5 E A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D U 6 N3 ? ? ? 1_555 E A 4 N1 ? ? D U 6 E A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D U 6 O4 ? ? ? 1_555 E A 4 N6 ? ? D U 6 E A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D U 7 N3 ? ? ? 1_555 E A 3 N1 ? ? D U 7 E A 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D U 7 O4 ? ? ? 1_555 E A 3 N6 ? ? D U 7 E A 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D U 8 N3 ? ? ? 1_555 E A 2 N1 ? ? D U 8 E A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D U 8 O4 ? ? ? 1_555 E A 2 N6 ? ? D U 8 E A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 ZN ? F ZN . ? A ZN 301 ? 1_555 SG ? A CYS 116 ? A CYS 116 ? 1_555 129.0 ? 2 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 ZN ? F ZN . ? A ZN 301 ? 1_555 SG ? A CYS 135 ? A CYS 135 ? 1_555 120.3 ? 3 SG ? A CYS 116 ? A CYS 116 ? 1_555 ZN ? F ZN . ? A ZN 301 ? 1_555 SG ? A CYS 135 ? A CYS 135 ? 1_555 110.1 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 21 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 21 _struct_mon_prot_cis.auth_asym_id C _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 22 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 22 _struct_mon_prot_cis.pdbx_auth_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.98 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 12 ? AA2 ? 7 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA1 9 10 ? anti-parallel AA1 10 11 ? anti-parallel AA1 11 12 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 40 ? VAL A 42 ? CYS A 40 VAL A 42 AA1 2 ARG A 56 ? LEU A 61 ? ARG A 56 LEU A 61 AA1 3 SER A 65 ? TYR A 72 ? SER A 65 TYR A 72 AA1 4 TYR A 85 ? TYR A 92 ? TYR A 85 TYR A 92 AA1 5 TRP A 7 ? VAL A 15 ? TRP A 7 VAL A 15 AA1 6 LEU B 64 ? PRO B 70 ? LEU B 64 PRO B 70 AA1 7 ILE B 55 ? ALA B 59 ? ILE B 55 ALA B 59 AA1 8 CYS B 25 ? LYS B 28 ? CYS B 25 LYS B 28 AA1 9 ASP B 120 ? PHE B 127 ? ASP B 120 PHE B 127 AA1 10 VAL B 106 ? ASP B 115 ? VAL B 106 ASP B 115 AA1 11 LYS B 94 ? LEU B 103 ? LYS B 94 LEU B 103 AA1 12 VAL B 86 ? ASP B 87 ? VAL B 86 ASP B 87 AA2 1 CYS A 40 ? VAL A 42 ? CYS A 40 VAL A 42 AA2 2 ARG A 56 ? LEU A 61 ? ARG A 56 LEU A 61 AA2 3 SER A 65 ? TYR A 72 ? SER A 65 TYR A 72 AA2 4 TYR A 85 ? TYR A 92 ? TYR A 85 TYR A 92 AA2 5 TRP A 97 ? ASP A 99 ? TRP A 97 ASP A 99 AA2 6 LYS B 94 ? LEU B 103 ? LYS B 94 LEU B 103 AA2 7 VAL B 86 ? ASP B 87 ? VAL B 86 ASP B 87 AA3 1 THR C 43 ? PHE C 47 ? THR C 43 PHE C 47 AA3 2 LEU C 30 ? PRO C 36 ? LEU C 30 PRO C 36 AA3 3 TYR C 74 ? TRP C 82 ? TYR C 74 TRP C 82 AA3 4 LEU C 102 ? ARG C 110 ? LEU C 102 ARG C 110 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N CYS A 40 ? N CYS A 40 O ILE A 58 ? O ILE A 58 AA1 2 3 N PHE A 59 ? N PHE A 59 O LEU A 67 ? O LEU A 67 AA1 3 4 N GLU A 68 ? N GLU A 68 O THR A 90 ? O THR A 90 AA1 4 5 O TYR A 85 ? O TYR A 85 N VAL A 15 ? N VAL A 15 AA1 5 6 N ILE A 8 ? N ILE A 8 O PHE B 69 ? O PHE B 69 AA1 6 7 O PHE B 68 ? O PHE B 68 N ILE B 55 ? N ILE B 55 AA1 7 8 O VAL B 58 ? O VAL B 58 N LYS B 28 ? N LYS B 28 AA1 8 9 N CYS B 25 ? N CYS B 25 O GLY B 123 ? O GLY B 123 AA1 9 10 O CYS B 124 ? O CYS B 124 N LYS B 111 ? N LYS B 111 AA1 10 11 O TRP B 110 ? O TRP B 110 N ALA B 99 ? N ALA B 99 AA1 11 12 O TYR B 96 ? O TYR B 96 N ASP B 87 ? N ASP B 87 AA2 1 2 N CYS A 40 ? N CYS A 40 O ILE A 58 ? O ILE A 58 AA2 2 3 N PHE A 59 ? N PHE A 59 O LEU A 67 ? O LEU A 67 AA2 3 4 N GLU A 68 ? N GLU A 68 O THR A 90 ? O THR A 90 AA2 4 5 N TRP A 91 ? N TRP A 91 O THR A 98 ? O THR A 98 AA2 5 6 N ASP A 99 ? N ASP A 99 O ILE B 102 ? O ILE B 102 AA2 6 7 O TYR B 96 ? O TYR B 96 N ASP B 87 ? N ASP B 87 AA3 1 2 O THR C 43 ? O THR C 43 N LEU C 34 ? N LEU C 34 AA3 2 3 N GLN C 33 ? N GLN C 33 O THR C 77 ? O THR C 77 AA3 3 4 N VAL C 76 ? N VAL C 76 O ASN C 103 ? O ASN C 103 # _pdbx_entry_details.entry_id 9ZY0 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 U _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 U _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.479 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.128 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 18 ? ? -79.69 -165.59 2 1 ALA A 50 ? ? -160.63 115.72 3 1 PHE A 114 ? ? 69.24 145.02 4 1 TYR A 137 ? ? -156.52 65.69 5 1 GLU A 212 ? ? 48.35 25.61 6 1 ARG B 149 ? ? -96.33 33.61 7 1 SER C 129 ? ? -95.70 33.83 8 1 PHE C 148 ? ? -142.44 22.00 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9ZY0 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9ZY0 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.2 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 545960 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.2 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'HIV-2 Vif in complex with human APOBEC3H and CBFbeta' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3, 4, 5' # _em_imaging.entry_id 9ZY0 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9ZY0 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9ZY0 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 162 ? A PRO 162 2 1 Y 1 A GLN 163 ? A GLN 163 3 1 Y 1 A ARG 164 ? A ARG 164 4 1 Y 1 A ASN 165 ? A ASN 165 5 1 Y 1 A SER 166 ? A SER 166 6 1 Y 1 A THR 167 ? A THR 167 7 1 Y 1 A THR 168 ? A THR 168 8 1 Y 1 A ARG 169 ? A ARG 169 9 1 Y 1 A LYS 170 ? A LYS 170 10 1 Y 1 A GLN 171 ? A GLN 171 11 1 Y 1 A TRP 172 ? A TRP 172 12 1 Y 1 A ARG 173 ? A ARG 173 13 1 Y 1 A ARG 174 ? A ARG 174 14 1 Y 1 A ASP 175 ? A ASP 175 15 1 Y 1 A TYR 176 ? A TYR 176 16 1 Y 1 A ARG 177 ? A ARG 177 17 1 Y 1 A ARG 178 ? A ARG 178 18 1 Y 1 A GLY 179 ? A GLY 179 19 1 Y 1 A LEU 180 ? A LEU 180 20 1 Y 1 A ARG 181 ? A ARG 181 21 1 Y 1 A VAL 182 ? A VAL 182 22 1 Y 1 A ALA 183 ? A ALA 183 23 1 Y 1 A ARG 184 ? A ARG 184 24 1 Y 1 A GLN 185 ? A GLN 185 25 1 Y 1 A ASP 186 ? A ASP 186 26 1 Y 1 A SER 187 ? A SER 187 27 1 Y 1 A ARG 188 ? A ARG 188 28 1 Y 1 A GLY 189 ? A GLY 189 29 1 Y 1 A LEU 190 ? A LEU 190 30 1 Y 1 A LYS 191 ? A LYS 191 31 1 Y 1 A GLN 192 ? A GLN 192 32 1 Y 1 A ARG 193 ? A ARG 193 33 1 Y 1 A GLY 194 ? A GLY 194 34 1 Y 1 A GLY 195 ? A GLY 195 35 1 Y 1 A GLU 196 ? A GLU 196 36 1 Y 1 A SER 197 ? A SER 197 37 1 Y 1 A PRO 198 ? A PRO 198 38 1 Y 1 A ALA 199 ? A ALA 199 39 1 Y 1 A PRO 200 ? A PRO 200 40 1 Y 1 B MET 1 ? B MET 1 41 1 Y 1 B PRO 2 ? B PRO 2 42 1 Y 1 B ARG 3 ? B ARG 3 43 1 Y 1 B VAL 4 ? B VAL 4 44 1 Y 1 B ASP 155 ? B ASP 155 45 1 Y 1 B ARG 156 ? B ARG 156 46 1 Y 1 B ASP 157 ? B ASP 157 47 1 Y 1 B ARG 158 ? B ARG 158 48 1 Y 1 B SER 159 ? B SER 159 49 1 Y 1 B HIS 160 ? B HIS 160 50 1 Y 1 B ARG 161 ? B ARG 161 51 1 Y 1 B GLU 162 ? B GLU 162 52 1 Y 1 B GLU 163 ? B GLU 163 53 1 Y 1 B MET 164 ? B MET 164 54 1 Y 1 B GLU 165 ? B GLU 165 55 1 Y 1 B VAL 166 ? B VAL 166 56 1 Y 1 B ARG 167 ? B ARG 167 57 1 Y 1 B VAL 168 ? B VAL 168 58 1 Y 1 B SER 169 ? B SER 169 59 1 Y 1 B GLN 170 ? B GLN 170 60 1 Y 1 B LEU 171 ? B LEU 171 61 1 Y 1 B LEU 172 ? B LEU 172 62 1 Y 1 B ALA 173 ? B ALA 173 63 1 Y 1 B VAL 174 ? B VAL 174 64 1 Y 1 B THR 175 ? B THR 175 65 1 Y 1 B GLY 176 ? B GLY 176 66 1 Y 1 B LYS 177 ? B LYS 177 67 1 Y 1 B LYS 178 ? B LYS 178 68 1 Y 1 B THR 179 ? B THR 179 69 1 Y 1 B THR 180 ? B THR 180 70 1 Y 1 B ARG 181 ? B ARG 181 71 1 Y 1 B PRO 182 ? B PRO 182 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 GLN N N N N 125 GLN CA C N S 126 GLN C C N N 127 GLN O O N N 128 GLN CB C N N 129 GLN CG C N N 130 GLN CD C N N 131 GLN OE1 O N N 132 GLN NE2 N N N 133 GLN OXT O N N 134 GLN H H N N 135 GLN H2 H N N 136 GLN HA H N N 137 GLN HB2 H N N 138 GLN HB3 H N N 139 GLN HG2 H N N 140 GLN HG3 H N N 141 GLN HE21 H N N 142 GLN HE22 H N N 143 GLN HXT H N N 144 GLU N N N N 145 GLU CA C N S 146 GLU C C N N 147 GLU O O N N 148 GLU CB C N N 149 GLU CG C N N 150 GLU CD C N N 151 GLU OE1 O N N 152 GLU OE2 O N N 153 GLU OXT O N N 154 GLU H H N N 155 GLU H2 H N N 156 GLU HA H N N 157 GLU HB2 H N N 158 GLU HB3 H N N 159 GLU HG2 H N N 160 GLU HG3 H N N 161 GLU HE2 H N N 162 GLU HXT H N N 163 GLY N N N N 164 GLY CA C N N 165 GLY C C N N 166 GLY O O N N 167 GLY OXT O N N 168 GLY H H N N 169 GLY H2 H N N 170 GLY HA2 H N N 171 GLY HA3 H N N 172 GLY HXT H N N 173 HIS N N N N 174 HIS CA C N S 175 HIS C C N N 176 HIS O O N N 177 HIS CB C N N 178 HIS CG C Y N 179 HIS ND1 N Y N 180 HIS CD2 C Y N 181 HIS CE1 C Y N 182 HIS NE2 N Y N 183 HIS OXT O N N 184 HIS H H N N 185 HIS H2 H N N 186 HIS HA H N N 187 HIS HB2 H N N 188 HIS HB3 H N N 189 HIS HD1 H N N 190 HIS HD2 H N N 191 HIS HE1 H N N 192 HIS HE2 H N N 193 HIS HXT H N N 194 ILE N N N N 195 ILE CA C N S 196 ILE C C N N 197 ILE O O N N 198 ILE CB C N S 199 ILE CG1 C N N 200 ILE CG2 C N N 201 ILE CD1 C N N 202 ILE OXT O N N 203 ILE H H N N 204 ILE H2 H N N 205 ILE HA H N N 206 ILE HB H N N 207 ILE HG12 H N N 208 ILE HG13 H N N 209 ILE HG21 H N N 210 ILE HG22 H N N 211 ILE HG23 H N N 212 ILE HD11 H N N 213 ILE HD12 H N N 214 ILE HD13 H N N 215 ILE HXT H N N 216 LEU N N N N 217 LEU CA C N S 218 LEU C C N N 219 LEU O O N N 220 LEU CB C N N 221 LEU CG C N N 222 LEU CD1 C N N 223 LEU CD2 C N N 224 LEU OXT O N N 225 LEU H H N N 226 LEU H2 H N N 227 LEU HA H N N 228 LEU HB2 H N N 229 LEU HB3 H N N 230 LEU HG H N N 231 LEU HD11 H N N 232 LEU HD12 H N N 233 LEU HD13 H N N 234 LEU HD21 H N N 235 LEU HD22 H N N 236 LEU HD23 H N N 237 LEU HXT H N N 238 LYS N N N N 239 LYS CA C N S 240 LYS C C N N 241 LYS O O N N 242 LYS CB C N N 243 LYS CG C N N 244 LYS CD C N N 245 LYS CE C N N 246 LYS NZ N N N 247 LYS OXT O N N 248 LYS H H N N 249 LYS H2 H N N 250 LYS HA H N N 251 LYS HB2 H N N 252 LYS HB3 H N N 253 LYS HG2 H N N 254 LYS HG3 H N N 255 LYS HD2 H N N 256 LYS HD3 H N N 257 LYS HE2 H N N 258 LYS HE3 H N N 259 LYS HZ1 H N N 260 LYS HZ2 H N N 261 LYS HZ3 H N N 262 LYS HXT H N N 263 MET N N N N 264 MET CA C N S 265 MET C C N N 266 MET O O N N 267 MET CB C N N 268 MET CG C N N 269 MET SD S N N 270 MET CE C N N 271 MET OXT O N N 272 MET H H N N 273 MET H2 H N N 274 MET HA H N N 275 MET HB2 H N N 276 MET HB3 H N N 277 MET HG2 H N N 278 MET HG3 H N N 279 MET HE1 H N N 280 MET HE2 H N N 281 MET HE3 H N N 282 MET HXT H N N 283 PHE N N N N 284 PHE CA C N S 285 PHE C C N N 286 PHE O O N N 287 PHE CB C N N 288 PHE CG C Y N 289 PHE CD1 C Y N 290 PHE CD2 C Y N 291 PHE CE1 C Y N 292 PHE CE2 C Y N 293 PHE CZ C Y N 294 PHE OXT O N N 295 PHE H H N N 296 PHE H2 H N N 297 PHE HA H N N 298 PHE HB2 H N N 299 PHE HB3 H N N 300 PHE HD1 H N N 301 PHE HD2 H N N 302 PHE HE1 H N N 303 PHE HE2 H N N 304 PHE HZ H N N 305 PHE HXT H N N 306 PRO N N N N 307 PRO CA C N S 308 PRO C C N N 309 PRO O O N N 310 PRO CB C N N 311 PRO CG C N N 312 PRO CD C N N 313 PRO OXT O N N 314 PRO H H N N 315 PRO HA H N N 316 PRO HB2 H N N 317 PRO HB3 H N N 318 PRO HG2 H N N 319 PRO HG3 H N N 320 PRO HD2 H N N 321 PRO HD3 H N N 322 PRO HXT H N N 323 SER N N N N 324 SER CA C N S 325 SER C C N N 326 SER O O N N 327 SER CB C N N 328 SER OG O N N 329 SER OXT O N N 330 SER H H N N 331 SER H2 H N N 332 SER HA H N N 333 SER HB2 H N N 334 SER HB3 H N N 335 SER HG H N N 336 SER HXT H N N 337 THR N N N N 338 THR CA C N S 339 THR C C N N 340 THR O O N N 341 THR CB C N R 342 THR OG1 O N N 343 THR CG2 C N N 344 THR OXT O N N 345 THR H H N N 346 THR H2 H N N 347 THR HA H N N 348 THR HB H N N 349 THR HG1 H N N 350 THR HG21 H N N 351 THR HG22 H N N 352 THR HG23 H N N 353 THR HXT H N N 354 TRP N N N N 355 TRP CA C N S 356 TRP C C N N 357 TRP O O N N 358 TRP CB C N N 359 TRP CG C Y N 360 TRP CD1 C Y N 361 TRP CD2 C Y N 362 TRP NE1 N Y N 363 TRP CE2 C Y N 364 TRP CE3 C Y N 365 TRP CZ2 C Y N 366 TRP CZ3 C Y N 367 TRP CH2 C Y N 368 TRP OXT O N N 369 TRP H H N N 370 TRP H2 H N N 371 TRP HA H N N 372 TRP HB2 H N N 373 TRP HB3 H N N 374 TRP HD1 H N N 375 TRP HE1 H N N 376 TRP HE3 H N N 377 TRP HZ2 H N N 378 TRP HZ3 H N N 379 TRP HH2 H N N 380 TRP HXT H N N 381 TYR N N N N 382 TYR CA C N S 383 TYR C C N N 384 TYR O O N N 385 TYR CB C N N 386 TYR CG C Y N 387 TYR CD1 C Y N 388 TYR CD2 C Y N 389 TYR CE1 C Y N 390 TYR CE2 C Y N 391 TYR CZ C Y N 392 TYR OH O N N 393 TYR OXT O N N 394 TYR H H N N 395 TYR H2 H N N 396 TYR HA H N N 397 TYR HB2 H N N 398 TYR HB3 H N N 399 TYR HD1 H N N 400 TYR HD2 H N N 401 TYR HE1 H N N 402 TYR HE2 H N N 403 TYR HH H N N 404 TYR HXT H N N 405 U OP3 O N N 406 U P P N N 407 U OP1 O N N 408 U OP2 O N N 409 U "O5'" O N N 410 U "C5'" C N N 411 U "C4'" C N R 412 U "O4'" O N N 413 U "C3'" C N S 414 U "O3'" O N N 415 U "C2'" C N R 416 U "O2'" O N N 417 U "C1'" C N R 418 U N1 N N N 419 U C2 C N N 420 U O2 O N N 421 U N3 N N N 422 U C4 C N N 423 U O4 O N N 424 U C5 C N N 425 U C6 C N N 426 U HOP3 H N N 427 U HOP2 H N N 428 U "H5'" H N N 429 U "H5''" H N N 430 U "H4'" H N N 431 U "H3'" H N N 432 U "HO3'" H N N 433 U "H2'" H N N 434 U "HO2'" H N N 435 U "H1'" H N N 436 U H3 H N N 437 U H5 H N N 438 U H6 H N N 439 VAL N N N N 440 VAL CA C N S 441 VAL C C N N 442 VAL O O N N 443 VAL CB C N N 444 VAL CG1 C N N 445 VAL CG2 C N N 446 VAL OXT O N N 447 VAL H H N N 448 VAL H2 H N N 449 VAL HA H N N 450 VAL HB H N N 451 VAL HG11 H N N 452 VAL HG12 H N N 453 VAL HG13 H N N 454 VAL HG21 H N N 455 VAL HG22 H N N 456 VAL HG23 H N N 457 VAL HXT H N N 458 ZN ZN ZN N N 459 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 GLN N CA sing N N 122 GLN N H sing N N 123 GLN N H2 sing N N 124 GLN CA C sing N N 125 GLN CA CB sing N N 126 GLN CA HA sing N N 127 GLN C O doub N N 128 GLN C OXT sing N N 129 GLN CB CG sing N N 130 GLN CB HB2 sing N N 131 GLN CB HB3 sing N N 132 GLN CG CD sing N N 133 GLN CG HG2 sing N N 134 GLN CG HG3 sing N N 135 GLN CD OE1 doub N N 136 GLN CD NE2 sing N N 137 GLN NE2 HE21 sing N N 138 GLN NE2 HE22 sing N N 139 GLN OXT HXT sing N N 140 GLU N CA sing N N 141 GLU N H sing N N 142 GLU N H2 sing N N 143 GLU CA C sing N N 144 GLU CA CB sing N N 145 GLU CA HA sing N N 146 GLU C O doub N N 147 GLU C OXT sing N N 148 GLU CB CG sing N N 149 GLU CB HB2 sing N N 150 GLU CB HB3 sing N N 151 GLU CG CD sing N N 152 GLU CG HG2 sing N N 153 GLU CG HG3 sing N N 154 GLU CD OE1 doub N N 155 GLU CD OE2 sing N N 156 GLU OE2 HE2 sing N N 157 GLU OXT HXT sing N N 158 GLY N CA sing N N 159 GLY N H sing N N 160 GLY N H2 sing N N 161 GLY CA C sing N N 162 GLY CA HA2 sing N N 163 GLY CA HA3 sing N N 164 GLY C O doub N N 165 GLY C OXT sing N N 166 GLY OXT HXT sing N N 167 HIS N CA sing N N 168 HIS N H sing N N 169 HIS N H2 sing N N 170 HIS CA C sing N N 171 HIS CA CB sing N N 172 HIS CA HA sing N N 173 HIS C O doub N N 174 HIS C OXT sing N N 175 HIS CB CG sing N N 176 HIS CB HB2 sing N N 177 HIS CB HB3 sing N N 178 HIS CG ND1 sing Y N 179 HIS CG CD2 doub Y N 180 HIS ND1 CE1 doub Y N 181 HIS ND1 HD1 sing N N 182 HIS CD2 NE2 sing Y N 183 HIS CD2 HD2 sing N N 184 HIS CE1 NE2 sing Y N 185 HIS CE1 HE1 sing N N 186 HIS NE2 HE2 sing N N 187 HIS OXT HXT sing N N 188 ILE N CA sing N N 189 ILE N H sing N N 190 ILE N H2 sing N N 191 ILE CA C sing N N 192 ILE CA CB sing N N 193 ILE CA HA sing N N 194 ILE C O doub N N 195 ILE C OXT sing N N 196 ILE CB CG1 sing N N 197 ILE CB CG2 sing N N 198 ILE CB HB sing N N 199 ILE CG1 CD1 sing N N 200 ILE CG1 HG12 sing N N 201 ILE CG1 HG13 sing N N 202 ILE CG2 HG21 sing N N 203 ILE CG2 HG22 sing N N 204 ILE CG2 HG23 sing N N 205 ILE CD1 HD11 sing N N 206 ILE CD1 HD12 sing N N 207 ILE CD1 HD13 sing N N 208 ILE OXT HXT sing N N 209 LEU N CA sing N N 210 LEU N H sing N N 211 LEU N H2 sing N N 212 LEU CA C sing N N 213 LEU CA CB sing N N 214 LEU CA HA sing N N 215 LEU C O doub N N 216 LEU C OXT sing N N 217 LEU CB CG sing N N 218 LEU CB HB2 sing N N 219 LEU CB HB3 sing N N 220 LEU CG CD1 sing N N 221 LEU CG CD2 sing N N 222 LEU CG HG sing N N 223 LEU CD1 HD11 sing N N 224 LEU CD1 HD12 sing N N 225 LEU CD1 HD13 sing N N 226 LEU CD2 HD21 sing N N 227 LEU CD2 HD22 sing N N 228 LEU CD2 HD23 sing N N 229 LEU OXT HXT sing N N 230 LYS N CA sing N N 231 LYS N H sing N N 232 LYS N H2 sing N N 233 LYS CA C sing N N 234 LYS CA CB sing N N 235 LYS CA HA sing N N 236 LYS C O doub N N 237 LYS C OXT sing N N 238 LYS CB CG sing N N 239 LYS CB HB2 sing N N 240 LYS CB HB3 sing N N 241 LYS CG CD sing N N 242 LYS CG HG2 sing N N 243 LYS CG HG3 sing N N 244 LYS CD CE sing N N 245 LYS CD HD2 sing N N 246 LYS CD HD3 sing N N 247 LYS CE NZ sing N N 248 LYS CE HE2 sing N N 249 LYS CE HE3 sing N N 250 LYS NZ HZ1 sing N N 251 LYS NZ HZ2 sing N N 252 LYS NZ HZ3 sing N N 253 LYS OXT HXT sing N N 254 MET N CA sing N N 255 MET N H sing N N 256 MET N H2 sing N N 257 MET CA C sing N N 258 MET CA CB sing N N 259 MET CA HA sing N N 260 MET C O doub N N 261 MET C OXT sing N N 262 MET CB CG sing N N 263 MET CB HB2 sing N N 264 MET CB HB3 sing N N 265 MET CG SD sing N N 266 MET CG HG2 sing N N 267 MET CG HG3 sing N N 268 MET SD CE sing N N 269 MET CE HE1 sing N N 270 MET CE HE2 sing N N 271 MET CE HE3 sing N N 272 MET OXT HXT sing N N 273 PHE N CA sing N N 274 PHE N H sing N N 275 PHE N H2 sing N N 276 PHE CA C sing N N 277 PHE CA CB sing N N 278 PHE CA HA sing N N 279 PHE C O doub N N 280 PHE C OXT sing N N 281 PHE CB CG sing N N 282 PHE CB HB2 sing N N 283 PHE CB HB3 sing N N 284 PHE CG CD1 doub Y N 285 PHE CG CD2 sing Y N 286 PHE CD1 CE1 sing Y N 287 PHE CD1 HD1 sing N N 288 PHE CD2 CE2 doub Y N 289 PHE CD2 HD2 sing N N 290 PHE CE1 CZ doub Y N 291 PHE CE1 HE1 sing N N 292 PHE CE2 CZ sing Y N 293 PHE CE2 HE2 sing N N 294 PHE CZ HZ sing N N 295 PHE OXT HXT sing N N 296 PRO N CA sing N N 297 PRO N CD sing N N 298 PRO N H sing N N 299 PRO CA C sing N N 300 PRO CA CB sing N N 301 PRO CA HA sing N N 302 PRO C O doub N N 303 PRO C OXT sing N N 304 PRO CB CG sing N N 305 PRO CB HB2 sing N N 306 PRO CB HB3 sing N N 307 PRO CG CD sing N N 308 PRO CG HG2 sing N N 309 PRO CG HG3 sing N N 310 PRO CD HD2 sing N N 311 PRO CD HD3 sing N N 312 PRO OXT HXT sing N N 313 SER N CA sing N N 314 SER N H sing N N 315 SER N H2 sing N N 316 SER CA C sing N N 317 SER CA CB sing N N 318 SER CA HA sing N N 319 SER C O doub N N 320 SER C OXT sing N N 321 SER CB OG sing N N 322 SER CB HB2 sing N N 323 SER CB HB3 sing N N 324 SER OG HG sing N N 325 SER OXT HXT sing N N 326 THR N CA sing N N 327 THR N H sing N N 328 THR N H2 sing N N 329 THR CA C sing N N 330 THR CA CB sing N N 331 THR CA HA sing N N 332 THR C O doub N N 333 THR C OXT sing N N 334 THR CB OG1 sing N N 335 THR CB CG2 sing N N 336 THR CB HB sing N N 337 THR OG1 HG1 sing N N 338 THR CG2 HG21 sing N N 339 THR CG2 HG22 sing N N 340 THR CG2 HG23 sing N N 341 THR OXT HXT sing N N 342 TRP N CA sing N N 343 TRP N H sing N N 344 TRP N H2 sing N N 345 TRP CA C sing N N 346 TRP CA CB sing N N 347 TRP CA HA sing N N 348 TRP C O doub N N 349 TRP C OXT sing N N 350 TRP CB CG sing N N 351 TRP CB HB2 sing N N 352 TRP CB HB3 sing N N 353 TRP CG CD1 doub Y N 354 TRP CG CD2 sing Y N 355 TRP CD1 NE1 sing Y N 356 TRP CD1 HD1 sing N N 357 TRP CD2 CE2 doub Y N 358 TRP CD2 CE3 sing Y N 359 TRP NE1 CE2 sing Y N 360 TRP NE1 HE1 sing N N 361 TRP CE2 CZ2 sing Y N 362 TRP CE3 CZ3 doub Y N 363 TRP CE3 HE3 sing N N 364 TRP CZ2 CH2 doub Y N 365 TRP CZ2 HZ2 sing N N 366 TRP CZ3 CH2 sing Y N 367 TRP CZ3 HZ3 sing N N 368 TRP CH2 HH2 sing N N 369 TRP OXT HXT sing N N 370 TYR N CA sing N N 371 TYR N H sing N N 372 TYR N H2 sing N N 373 TYR CA C sing N N 374 TYR CA CB sing N N 375 TYR CA HA sing N N 376 TYR C O doub N N 377 TYR C OXT sing N N 378 TYR CB CG sing N N 379 TYR CB HB2 sing N N 380 TYR CB HB3 sing N N 381 TYR CG CD1 doub Y N 382 TYR CG CD2 sing Y N 383 TYR CD1 CE1 sing Y N 384 TYR CD1 HD1 sing N N 385 TYR CD2 CE2 doub Y N 386 TYR CD2 HD2 sing N N 387 TYR CE1 CZ doub Y N 388 TYR CE1 HE1 sing N N 389 TYR CE2 CZ sing Y N 390 TYR CE2 HE2 sing N N 391 TYR CZ OH sing N N 392 TYR OH HH sing N N 393 TYR OXT HXT sing N N 394 U OP3 P sing N N 395 U OP3 HOP3 sing N N 396 U P OP1 doub N N 397 U P OP2 sing N N 398 U P "O5'" sing N N 399 U OP2 HOP2 sing N N 400 U "O5'" "C5'" sing N N 401 U "C5'" "C4'" sing N N 402 U "C5'" "H5'" sing N N 403 U "C5'" "H5''" sing N N 404 U "C4'" "O4'" sing N N 405 U "C4'" "C3'" sing N N 406 U "C4'" "H4'" sing N N 407 U "O4'" "C1'" sing N N 408 U "C3'" "O3'" sing N N 409 U "C3'" "C2'" sing N N 410 U "C3'" "H3'" sing N N 411 U "O3'" "HO3'" sing N N 412 U "C2'" "O2'" sing N N 413 U "C2'" "C1'" sing N N 414 U "C2'" "H2'" sing N N 415 U "O2'" "HO2'" sing N N 416 U "C1'" N1 sing N N 417 U "C1'" "H1'" sing N N 418 U N1 C2 sing N N 419 U N1 C6 sing N N 420 U C2 O2 doub N N 421 U C2 N3 sing N N 422 U N3 C4 sing N N 423 U N3 H3 sing N N 424 U C4 O4 doub N N 425 U C4 C5 sing N N 426 U C5 C6 doub N N 427 U C5 H5 sing N N 428 U C6 H6 sing N N 429 VAL N CA sing N N 430 VAL N H sing N N 431 VAL N H2 sing N N 432 VAL CA C sing N N 433 VAL CA CB sing N N 434 VAL CA HA sing N N 435 VAL C O doub N N 436 VAL C OXT sing N N 437 VAL CB CG1 sing N N 438 VAL CB CG2 sing N N 439 VAL CB HB sing N N 440 VAL CG1 HG11 sing N N 441 VAL CG1 HG12 sing N N 442 VAL CG1 HG13 sing N N 443 VAL CG2 HG21 sing N N 444 VAL CG2 HG22 sing N N 445 VAL CG2 HG23 sing N N 446 VAL OXT HXT sing N N 447 # _em_admin.current_status REL _em_admin.deposition_date 2026-01-05 _em_admin.deposition_site RCSB _em_admin.entry_id 9ZY0 _em_admin.last_update 2026-07-15 _em_admin.map_release_date 2026-07-15 _em_admin.title 'Cryo-EM structure of the monomeric HIV-2 Vif-human APOBEC3H-CBFbeta complex' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.13 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 7108 _em_entity_assembly_recombinant.organism 'Spodoptera frugiperda' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 47.7 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9ZY0 'double helix' 9ZY0 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D U 2 1_555 E A 8 1_555 -0.043 -0.113 -0.163 -4.571 -1.548 2.579 1 D_U2:A14_E D 2 ? E 14 ? 20 1 1 D U 3 1_555 E A 7 1_555 -0.094 -0.085 0.158 -3.604 1.646 -0.177 2 D_U3:A13_E D 3 ? E 13 ? 20 1 1 D U 4 1_555 E A 6 1_555 -0.031 -0.123 0.277 -2.594 0.026 1.895 3 D_U4:A12_E D 4 ? E 12 ? 20 1 1 D U 5 1_555 E A 5 1_555 -0.045 -0.154 0.493 -2.072 1.323 2.187 4 D_U5:A11_E D 5 ? E 11 ? 20 1 1 D U 6 1_555 E A 4 1_555 -0.079 -0.230 0.750 -3.543 2.273 1.691 5 D_U6:A10_E D 6 ? E 10 ? 20 1 1 D U 7 1_555 E A 3 1_555 -0.812 -0.042 0.942 -4.504 8.042 6.049 6 D_U7:A9_E D 7 ? E 9 ? 20 1 1 D U 8 1_555 E A 2 1_555 -1.421 0.033 0.694 0.506 11.517 -1.345 7 D_U8:A8_E D 8 ? E 8 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D U 2 1_555 E A 8 1_555 D U 3 1_555 E A 7 1_555 0.391 -1.513 3.718 -1.819 0.748 28.705 -3.234 -1.246 3.647 1.506 3.663 28.771 1 DD_U2U3:A13A14_EE D 2 ? E 14 ? D 3 ? E 13 ? 1 D U 3 1_555 E A 7 1_555 D U 4 1_555 E A 6 1_555 -0.011 -2.009 3.015 -0.933 6.927 33.348 -4.381 -0.109 2.558 11.909 1.603 34.052 2 DD_U3U4:A12A13_EE D 3 ? E 13 ? D 4 ? E 12 ? 1 D U 4 1_555 E A 6 1_555 D U 5 1_555 E A 5 1_555 0.188 -1.992 3.071 -1.338 3.161 29.585 -4.475 -0.620 2.837 6.164 2.610 29.779 3 DD_U4U5:A11A12_EE D 4 ? E 12 ? D 5 ? E 11 ? 1 D U 5 1_555 E A 5 1_555 D U 6 1_555 E A 4 1_555 0.111 -1.999 3.075 -1.738 3.439 32.173 -4.133 -0.476 2.842 6.178 3.123 32.397 4 DD_U5U6:A10A11_EE D 5 ? E 11 ? D 6 ? E 10 ? 1 D U 6 1_555 E A 4 1_555 D U 7 1_555 E A 3 1_555 0.109 -2.136 3.090 -2.377 4.251 29.127 -5.002 -0.667 2.740 8.379 4.685 29.522 5 DD_U6U7:A9A10_EE D 6 ? E 10 ? D 7 ? E 9 ? 1 D U 7 1_555 E A 3 1_555 D U 8 1_555 E A 2 1_555 -0.595 -2.085 3.030 -0.362 3.743 29.547 -4.751 1.091 2.758 7.302 0.707 29.780 6 DD_U7U8:A8A9_EE D 7 ? E 9 ? D 8 ? E 8 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number U54AI170792 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9ZY0 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S ZN # loop_ #